Citrus Sinensis ID: 018916
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | 2.2.26 [Sep-21-2011] | |||||||
| O23969 | 352 | Pollen-specific protein S | N/A | no | 0.982 | 0.974 | 0.658 | 1e-130 | |
| Q3SYX0 | 384 | Protein NDRG1 OS=Bos taur | yes | no | 0.799 | 0.726 | 0.306 | 9e-35 | |
| Q641F2 | 396 | Protein NDRG1-A OS=Xenopu | N/A | no | 0.799 | 0.704 | 0.313 | 5e-34 | |
| A5A6K6 | 357 | Protein NDRG2 OS=Pan trog | no | no | 0.787 | 0.770 | 0.302 | 1e-33 | |
| A7MB28 | 375 | Protein NDRG3 OS=Bos taur | no | no | 0.787 | 0.733 | 0.298 | 1e-33 | |
| Q62433 | 394 | Protein NDRG1 OS=Mus musc | yes | no | 0.799 | 0.708 | 0.306 | 2e-33 | |
| Q5RA95 | 375 | Protein NDRG3 OS=Pongo ab | yes | no | 0.787 | 0.733 | 0.294 | 2e-33 | |
| Q9UGV2 | 375 | Protein NDRG3 OS=Homo sap | yes | no | 0.787 | 0.733 | 0.294 | 3e-33 | |
| Q5RBN6 | 371 | Protein NDRG2 OS=Pongo ab | no | no | 0.779 | 0.733 | 0.302 | 3e-33 | |
| Q6JE36 | 394 | Protein NDRG1 OS=Rattus n | yes | no | 0.799 | 0.708 | 0.306 | 3e-33 |
| >sp|O23969|SF21_HELAN Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/346 (65%), Positives = 276/346 (79%), Gaps = 3/346 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADS S+S+ + GK+++I+T GS+SVT+ GDQ+KP L+TYPDLALN+MSCFQ
Sbjct: 1 MADSG-HSISVTFPSFHSGGKEHIIRTGCGSVSVTVCGDQEKPPLITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLF PE+ SLLLHNFCIYHINPPGHE GAA+I D+PV S++DL DQI VLN+F LG+
Sbjct: 60 GLFVSPESASLLLHNFCIYHINPPGHELGAASIGIDDPVPSIEDLCDQILVVLNYFRLGS 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMG AGAYILTLF++KY RV GLIL+SP+CKAPSWTE YNK+ S LYYYGMC +
Sbjct: 120 VMCMGAMAGAYILTLFSIKYSERVTGLILISPICKAPSWTERFYNKLTSKTLYYYGMCDL 179
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
VKELL+ RYFSK EV GN ++PESD+V ACR+LLDER S NVW +L+AI+ R DI+E L+
Sbjct: 180 VKELLIHRYFSK-EVCGNPEIPESDMVLACRKLLDERDSVNVWRYLQAIDSRRDITEELK 238
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
L+C+++IFVG+SSPFH EA+ + K+ SALVEV ACGSMVT+EQPHAMLIP+E FL
Sbjct: 239 SLECKTIIFVGDSSPFHDEALQIAEKLGTNCSALVEVHACGSMVTQEQPHAMLIPLENFL 298
Query: 301 MGYGLYRP-TLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 345
G+GLYRP S SPRSPL P I PELL PE MGLKL+PIK R+S
Sbjct: 299 KGFGLYRPCRYSNSPRSPLGPSSIDPELLYPEKMGLKLRPIKLRVS 344
|
Helianthus annuus (taxid: 4232) |
| >sp|Q3SYX0|NDRG1_BOVIN Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 158/303 (52%), Gaps = 24/303 (7%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198
V GL+L++ A W +W +K+ G + ++++ F K+E++ N
Sbjct: 152 NNPEMVEGLVLINVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEMQNN 204
Query: 199 AQVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 250
+V V A R ++++ N+ F+ A NGR D+ LQC +L+ V
Sbjct: 205 VEV-----VHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVV 259
Query: 251 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 310
G+SSP V SK+D + L+++ CG + QP + +YF+ G G Y P+
Sbjct: 260 GDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSA 318
Query: 311 SVS 313
S++
Sbjct: 319 SMT 321
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy. Bos taurus (taxid: 9913) |
| >sp|Q641F2|NDR1A_XENLA Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 24/303 (7%)
Query: 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
+++ I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F +
Sbjct: 34 QEHDIETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSV 92
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+
Sbjct: 93 CHVDAPGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFAL 152
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198
+ V GL+L++ A W +W K+ G + ++++ FSK EV N
Sbjct: 153 NHPSMVEGLVLININPCAEGWMDWAATKI-------SGWTNALPDMVISHLFSKDEVHSN 205
Query: 199 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 250
PE +V+ R+ +L + +NV HF+++ N R D+ L+C +L+ V
Sbjct: 206 ---PE--LVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVV 260
Query: 251 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 310
G+SSP V SK+D + L+++ CG QP + +YF+ G G Y P
Sbjct: 261 GDSSPAVDAVVECNSKLDPTKTTLLKMSDCGGFPQVIQPAKLAEAFKYFVQGMG-YMPAA 319
Query: 311 SVS 313
S++
Sbjct: 320 SMT 322
|
May be involved in pronephros development, after specification of the pronephros. Xenopus laevis (taxid: 8355) |
| >sp|A5A6K6|NDRG2_PANTR Protein NDRG2 OS=Pan troglodytes GN=NDRG2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 17 PPSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH 74
P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++
Sbjct: 21 PEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQ 79
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL
Sbjct: 80 NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILA 139
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQE 194
+A+ + V GL+L++ A W +W +K+ G+ + E++L FS++E
Sbjct: 140 RYALNHPDTVEGLVLINIDPNAKRWMDWAAHKLT-------GLTSSIPEMILGHLFSQEE 192
Query: 195 VRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFV 250
+ GN S+++Q R ++ + N+ + + N R D++ G L+C ++ V
Sbjct: 193 LSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLKCPVMLVV 247
Query: 251 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304
G+ +P V SK+D ++ +++ G QP + +YFL G G
Sbjct: 248 GDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMG 301
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Pan troglodytes (taxid: 9598) |
| >sp|A7MB28|NDRG3_BOVIN Protein NDRG3 OS=Bos taurus GN=NDRG3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 158/302 (52%), Gaps = 27/302 (8%)
Query: 25 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++
Sbjct: 35 IETAHGMVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVD 93
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ +
Sbjct: 94 APGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLNLKSIIGIGVGAGAYILSRFALNHPE 153
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W +K+ G+ V +++L +F ++E++ N
Sbjct: 154 LVEGLVLINVDPCAKGWIDWAASKL-------SGLTTNVVDIILSHHFGQEELQANL--- 203
Query: 203 ESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSLIFVG 251
D++Q R + + N+ FL + NGR D+ + L+C +L+ VG
Sbjct: 204 --DLIQTYRLHIAQDINQENLQLFLGSYNGRKDLEIERPILGQNDNKSKTLKCSTLLVVG 261
Query: 252 ESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLS 311
+SSP V S+++ + L+++ CG + QP + +YFL G G Y P+ S
Sbjct: 262 DSSPAVEAVVECNSRLNPVNTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YIPSAS 320
Query: 312 VS 313
++
Sbjct: 321 MT 322
|
Bos taurus (taxid: 9913) |
| >sp|Q62433|NDRG1_MOUSE Protein NDRG1 OS=Mus musculus GN=Ndrg1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 157/303 (51%), Gaps = 24/303 (7%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198
V GL+L++ A W +W +K+ G + ++++ F K+E+ N
Sbjct: 152 NNPEMVEGLVLMNVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEIHNN 204
Query: 199 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 250
+V V R+ +L++ SN+ F+ A N R D+ LQC +L+ V
Sbjct: 205 VEV-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVV 259
Query: 251 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 310
G++SP V SK+D + L+++ CG + QP + +YF+ G G Y P+
Sbjct: 260 GDNSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSA 318
Query: 311 SVS 313
S++
Sbjct: 319 SMT 321
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy (By similarity). Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Mus musculus (taxid: 10090) |
| >sp|Q5RA95|NDRG3_PONAB Protein NDRG3 OS=Pongo abelii GN=NDRG3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 27/302 (8%)
Query: 25 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++
Sbjct: 35 IETTHGMVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVD 93
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ +
Sbjct: 94 APGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPE 153
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W +K+ G+ V +++L +F ++E++ N
Sbjct: 154 LVEGLVLINVDPCAKGWIDWAASKL-------SGLTTNVVDIILAHHFGQEELQANP--- 203
Query: 203 ESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSLIFVG 251
D++Q R + + N+ FL + NGR D+ + L+C +L+ VG
Sbjct: 204 --DLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVG 261
Query: 252 ESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLS 311
++SP V S+++ + L+++ CG + QP + +YFL G G Y P+ S
Sbjct: 262 DNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YIPSAS 320
Query: 312 VS 313
++
Sbjct: 321 MT 322
|
Pongo abelii (taxid: 9601) |
| >sp|Q9UGV2|NDRG3_HUMAN Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 158/302 (52%), Gaps = 27/302 (8%)
Query: 25 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++
Sbjct: 35 IETTHGVVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVD 93
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ +
Sbjct: 94 APGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPE 153
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W +K+ G+ V +++L +F ++E++ N
Sbjct: 154 LVEGLVLINVDPCAKGWIDWAASKL-------SGLTTNVVDIILAHHFGQEELQANL--- 203
Query: 203 ESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSLIFVG 251
D++Q R + + N+ FL + NGR D+ + L+C +L+ VG
Sbjct: 204 --DLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVG 261
Query: 252 ESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLS 311
++SP V S+++ + L+++ CG + QP + +YFL G G Y P+ S
Sbjct: 262 DNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YIPSAS 320
Query: 312 VS 313
++
Sbjct: 321 MT 322
|
Homo sapiens (taxid: 9606) |
| >sp|Q5RBN6|NDRG2_PONAB Protein NDRG2 OS=Pongo abelii GN=NDRG2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 149/291 (51%), Gaps = 19/291 (6%)
Query: 20 GKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
G+ + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF
Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFV 96
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A
Sbjct: 97 RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYA 156
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197
+ + V GL+L++ A W +W +K+ G+ + E++L FS++E+ G
Sbjct: 157 LNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSG 209
Query: 198 NAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGES 253
N S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 210 N-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLKCPVMLVVGDQ 264
Query: 254 SPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304
+P V SK+D ++ +++ G QP + +YFL G G
Sbjct: 265 APHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMG 315
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Pongo abelii (taxid: 9601) |
| >sp|Q6JE36|NDRG1_RAT Protein NDRG1 OS=Rattus norvegicus GN=Ndrg1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 157/303 (51%), Gaps = 24/303 (7%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHKFGLKSVIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198
V GL+L++ A W +W +K+ G + ++++ F K+E+ N
Sbjct: 152 NNPEMVEGLVLMNVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEIHSN 204
Query: 199 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 250
+V V R+ +L++ SN+ F+ A N R D+ LQC +L+ V
Sbjct: 205 VEV-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVV 259
Query: 251 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 310
G++SP V SK+D + L+++ CG + QP + +YF+ G G Y P+
Sbjct: 260 GDNSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSA 318
Query: 311 SVS 313
S++
Sbjct: 319 SMT 321
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy. Rattus norvegicus (taxid: 10116) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| 225429470 | 344 | PREDICTED: pollen-specific protein SF21 | 0.982 | 0.997 | 0.864 | 1e-173 | |
| 255550824 | 347 | pollen specific protein sf21, putative [ | 0.979 | 0.985 | 0.857 | 1e-172 | |
| 224092204 | 347 | predicted protein [Populus trichocarpa] | 0.974 | 0.979 | 0.850 | 1e-169 | |
| 356564069 | 347 | PREDICTED: pollen-specific protein SF21- | 0.982 | 0.988 | 0.831 | 1e-168 | |
| 359807335 | 344 | uncharacterized protein LOC100804729 [Gl | 0.979 | 0.994 | 0.831 | 1e-167 | |
| 357437503 | 349 | Pollen-specific protein SF21 [Medicago t | 0.994 | 0.994 | 0.814 | 1e-166 | |
| 356564067 | 349 | PREDICTED: pollen-specific protein SF21- | 0.945 | 0.945 | 0.852 | 1e-165 | |
| 356506957 | 344 | PREDICTED: pollen-specific protein SF21- | 0.979 | 0.994 | 0.828 | 1e-165 | |
| 224141627 | 347 | predicted protein [Populus trichocarpa] | 0.982 | 0.988 | 0.835 | 1e-165 | |
| 449450343 | 347 | PREDICTED: pollen-specific protein SF21- | 0.974 | 0.979 | 0.830 | 1e-165 |
| >gi|225429470|ref|XP_002277611.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera] gi|296081622|emb|CBI20627.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 299/346 (86%), Positives = 325/346 (93%), Gaps = 3/346 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDMET GK++L+KTS GS+SV+++GD DKPALVTYPDLALN++SCFQ
Sbjct: 1 MADSS-DSVSIDMETISLGGKEHLVKTSKGSVSVSVFGDPDKPALVTYPDLALNHLSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEA SLLLHNFCIYHI+PPGHE GA A+S DEP LS DDLADQIAEVLN FGLGA
Sbjct: 60 GLFFCPEAFSLLLHNFCIYHISPPGHELGADAVSLDEPALSADDLADQIAEVLNFFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFA+KYRH V+GLIL+SPLCKAPSWTEWLYNKVM N+LYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAIKYRHHVVGLILISPLCKAPSWTEWLYNKVMLNVLYYYGMCGV 179
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
VKELLLKRYFSK EVRG+AQVPESDIVQACRRLLDERQSSNV FLEAINGRPDI+EGLR
Sbjct: 180 VKELLLKRYFSK-EVRGSAQVPESDIVQACRRLLDERQSSNVLKFLEAINGRPDITEGLR 238
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
KLQCRSL+FVG++SPFHSEA+HMTSK+DRRYSALVEVQ+CGSMVTEEQPHAMLIPMEYFL
Sbjct: 239 KLQCRSLLFVGDNSPFHSEALHMTSKLDRRYSALVEVQSCGSMVTEEQPHAMLIPMEYFL 298
Query: 301 MGYGLYRP-TLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 345
MGYGLYRP T+S+SPRSPLSP CI+PELLSPESMGLKLKPIKTRIS
Sbjct: 299 MGYGLYRPSTVSLSPRSPLSPSCIAPELLSPESMGLKLKPIKTRIS 344
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550824|ref|XP_002516460.1| pollen specific protein sf21, putative [Ricinus communis] gi|223544280|gb|EEF45801.1| pollen specific protein sf21, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/345 (85%), Positives = 322/345 (93%), Gaps = 3/345 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDMET +GK+ L+KT HG +SV++YGDQDKPAL+TYPDLALN+MSCFQ
Sbjct: 1 MADSS-DSVSIDMETLSLAGKEFLVKTCHGCVSVSVYGDQDKPALITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEACSLLL+NFCIYHI+PPGHE GAA +S D+ VLSVDDLADQIA++LN+FGLGA
Sbjct: 60 GLFFCPEACSLLLYNFCIYHISPPGHELGAATVSPDDNVLSVDDLADQIADILNYFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLIL+SPLC+ PSWTEWL NKV+SNLLYYYG+CGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILISPLCQEPSWTEWLCNKVISNLLYYYGICGV 179
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
VKE LLKRYFSK E RG+AQVPESDIVQACRRLLDERQS NVW FLEA+NGRPDISEGLR
Sbjct: 180 VKEFLLKRYFSK-EARGSAQVPESDIVQACRRLLDERQSLNVWRFLEALNGRPDISEGLR 238
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
KL CRSLIFVGE+SPFHSEA+HMTSK+DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL
Sbjct: 239 KLHCRSLIFVGENSPFHSEALHMTSKLDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 298
Query: 301 MGYGLYR-PTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRI 344
MGYG+YR P LSVSPRSPLSP CISPELLSPESMGLKLKPI+TRI
Sbjct: 299 MGYGMYRPPKLSVSPRSPLSPLCISPELLSPESMGLKLKPIRTRI 343
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092204|ref|XP_002309507.1| predicted protein [Populus trichocarpa] gi|222855483|gb|EEE93030.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/342 (85%), Positives = 317/342 (92%), Gaps = 2/342 (0%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVSIDMETP SGK+ +++T G +SV++YGDQDKPALVTYPDLALN++SCFQGLFF
Sbjct: 4 SSDSVSIDMETPSLSGKEYVVETCCGYVSVSVYGDQDKPALVTYPDLALNHISCFQGLFF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAA IS D+P+LSVDDLADQIA+VLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAATISPDDPLLSVDDLADQIADVLNYFGLDAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMKYR RVLGLIL+SPLC APSWTEWLYNKV+SNLLYYYGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKYRQRVLGLILISPLCNAPSWTEWLYNKVLSNLLYYYGMCGVVKEL 183
Query: 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 244
LLKRYFSK E RG+AQVPESD+VQACRRLLDERQ NVW FLEA+NGR DIS+GLRKL+C
Sbjct: 184 LLKRYFSK-EARGSAQVPESDVVQACRRLLDERQGLNVWRFLEAMNGRQDISDGLRKLRC 242
Query: 245 RSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304
RSLI+VGESSPFH EA+ M SK+DRR SALVEVQACGSMVTEEQPHAMLIP+EYFLMGYG
Sbjct: 243 RSLIYVGESSPFHFEALDMNSKLDRRCSALVEVQACGSMVTEEQPHAMLIPLEYFLMGYG 302
Query: 305 LYR-PTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 345
+YR P LSVSPRSPLSP CISPELLSPESMGLKLKPIKTRIS
Sbjct: 303 MYRPPKLSVSPRSPLSPICISPELLSPESMGLKLKPIKTRIS 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564069|ref|XP_003550279.1| PREDICTED: pollen-specific protein SF21-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/345 (83%), Positives = 315/345 (91%), Gaps = 2/345 (0%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
+ DS+S+D+++ PS ++++I+T HGS+SV +YGDQDKPAL+TYPDLALNY+SCFQGL F
Sbjct: 4 AHDSLSLDIDSFSPSPQEHIIRTRHGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEA LLLHNFCIYHI+PPGHE GAAAI D P+LSVDDLADQIAEVLN FGL AVMCM
Sbjct: 64 CPEAYYLLLHNFCIYHISPPGHELGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMKYR RVLGLILVSPLCK PSWTEWLYNKVMSNLLY+YGMCGVVKE+
Sbjct: 124 GVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEI 183
Query: 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 244
LLKRYFSK E+RG Q+PESDIV++CRRLLDERQS NVW FLEAIN RPDISEGLRKL C
Sbjct: 184 LLKRYFSK-EIRGGTQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHC 242
Query: 245 RSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304
RSLIFVG+ SPFHSEAVHMTSK+DRR+SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG
Sbjct: 243 RSLIFVGDMSPFHSEAVHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 302
Query: 305 LYRPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 348
LY+P+ LSVSPRSPLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 303 LYKPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISLEI 347
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359807335|ref|NP_001240866.1| uncharacterized protein LOC100804729 [Glycine max] gi|255634903|gb|ACU17810.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/344 (83%), Positives = 313/344 (90%), Gaps = 2/344 (0%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+DSVS+DME P ++++I+T HG +SV +YGDQDKPAL+TYPDLALNY+SCFQGL FC
Sbjct: 2 ADSVSVDMEAISPPPEEHIIRTRHGRVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFC 61
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEACSLLLHNFCIYHI+PPGHE GAAAI D+P+LS DDLADQIAEVLN+FG VMCMG
Sbjct: 62 PEACSLLLHNFCIYHISPPGHELGAAAIDPDDPILSADDLADQIAEVLNYFGHSTVMCMG 121
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
VTAGAYILTLFAMKYRHRVLGL+LVSPLCKAPSWTEWLYNKVMSNLLY+YGMCGVVKE+L
Sbjct: 122 VTAGAYILTLFAMKYRHRVLGLVLVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEIL 181
Query: 186 LKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 245
LKRYFSK EVRG+ + ESD+VQAC+R LDERQS NVW FLEAINGR DISEGLRKLQCR
Sbjct: 182 LKRYFSK-EVRGSDYLSESDVVQACQRSLDERQSLNVWRFLEAINGRYDISEGLRKLQCR 240
Query: 246 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 305
SLIFVG+ SPFH+EA+HMTSK+DRR SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL
Sbjct: 241 SLIFVGDMSPFHAEALHMTSKLDRRLSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 300
Query: 306 YRPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 348
YRP+ LSVSPRSPLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 301 YRPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISVEI 344
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437503|ref|XP_003589027.1| Pollen-specific protein SF21 [Medicago truncatula] gi|355478075|gb|AES59278.1| Pollen-specific protein SF21 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/350 (81%), Positives = 315/350 (90%), Gaps = 3/350 (0%)
Query: 1 MADSS-SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCF 59
MADS+ +DSVS+D+++ PS K+++I+T HGS+SV +YGDQDKPAL+TYPDL LNY+SCF
Sbjct: 1 MADSTPTDSVSVDIDSISPSPKEHIIRTCHGSVSVAVYGDQDKPALITYPDLGLNYVSCF 60
Query: 60 QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119
QGL FCPEA LLLHNFCIYHI+PPGHE GAAAI D PVLSVDDLADQIAEVLN FGL
Sbjct: 61 QGLLFCPEAYYLLLHNFCIYHISPPGHELGAAAIDPDYPVLSVDDLADQIAEVLNFFGLN 120
Query: 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179
AVMCMGVTAGAYILTLFAMKYR RVLGLILVSPLCK PSW+EWLYNKVMSNLLY+YGMCG
Sbjct: 121 AVMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGMCG 180
Query: 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL 239
VVKE+LLKRYFSK E+RG Q PESDIV+ACRR LDERQS NVW FLEAINGRPD+SEGL
Sbjct: 181 VVKEILLKRYFSK-EIRGGTQFPESDIVKACRRSLDERQSLNVWRFLEAINGRPDLSEGL 239
Query: 240 RKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYF 299
R L CRSLIFVG+ SP+HSE++H+T K+DRR+SALVEVQACGSMVTEEQPHAMLIPMEYF
Sbjct: 240 RNLHCRSLIFVGDMSPYHSESLHITKKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYF 299
Query: 300 LMGYGLYRPTL-SVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 348
LMGYGLYRP+ SVSPRSPLSP CISPEL SPESMGLKLKPIKTRI+ I
Sbjct: 300 LMGYGLYRPSRKSVSPRSPLSPSCISPELFSPESMGLKLKPIKTRITGEI 349
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564067|ref|XP_003550278.1| PREDICTED: pollen-specific protein SF21-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/332 (85%), Positives = 305/332 (91%), Gaps = 2/332 (0%)
Query: 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
PS ++++I+T HGS+SV +YGDQDKPAL+TYPDLALNY+SCFQGL FCPEA LLLHNFC
Sbjct: 19 PSPQEHIIRTRHGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEAYYLLLHNFC 78
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
IYHI+PPGHE GAAAI D P+LSVDDLADQIAEVLN FGL AVMCMGVTAGAYILTLFA
Sbjct: 79 IYHISPPGHELGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYILTLFA 138
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197
MKYR RVLGLILVSPLCK PSWTEWLYNKVMSNLLY+YGMCGVVKE+LLKRYFSK E+RG
Sbjct: 139 MKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSK-EIRG 197
Query: 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 257
Q+PESDIV++CRRLLDERQS NVW FLEAIN RPDISEGLRKL CRSLIFVG+ SPFH
Sbjct: 198 GTQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHCRSLIFVGDMSPFH 257
Query: 258 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT-LSVSPRS 316
SEAVHMTSK+DRR+SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY+P+ LSVSPRS
Sbjct: 258 SEAVHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRS 317
Query: 317 PLSPCCISPELLSPESMGLKLKPIKTRISAGI 348
PLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 318 PLSPSCISPELYSPESMGLKLKPIKTRISLEI 349
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356506957|ref|XP_003522239.1| PREDICTED: pollen-specific protein SF21-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/344 (82%), Positives = 311/344 (90%), Gaps = 2/344 (0%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+DSVS+DME P ++++++T HG +SV +YGDQDKPAL+TYPDLALNY+SCFQGL FC
Sbjct: 2 ADSVSVDMEAISPPPEEHVVRTRHGCVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFC 61
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEACSLLLHNFCIYHI+PPGHE GAAAI D+P+LS DDL DQIAEVLN+FG VMCMG
Sbjct: 62 PEACSLLLHNFCIYHISPPGHELGAAAIDPDDPILSADDLVDQIAEVLNYFGHSTVMCMG 121
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY+YGMCGVVKE+L
Sbjct: 122 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEIL 181
Query: 186 LKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 245
LKRYFSK EVRG+ +PESDIVQAC+R LDERQS NVW FLEAINGR DISEGLRKL+CR
Sbjct: 182 LKRYFSK-EVRGSDYLPESDIVQACQRSLDERQSLNVWRFLEAINGRYDISEGLRKLECR 240
Query: 246 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 305
SLIFVG+ S FH EA+HMTSK+DRR SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL
Sbjct: 241 SLIFVGDMSCFHGEALHMTSKLDRRLSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 300
Query: 306 YRPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 348
YRP+ LSVSPRSPLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 301 YRPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISEEI 344
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141627|ref|XP_002324168.1| predicted protein [Populus trichocarpa] gi|222865602|gb|EEF02733.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/346 (83%), Positives = 313/346 (90%), Gaps = 3/346 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
M DSS DS+SIDMETP SGK+ +I+T +G +SV++YGDQDKPALVTYPDLALN+ SCFQ
Sbjct: 1 MGDSS-DSLSIDMETPSLSGKEYVIETCYGHVSVSVYGDQDKPALVTYPDLALNHTSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GL FCPEACSLLLHNFCIYHI+PPGHE GAA IS D+P+LSVDDLADQIAEVLN+FGL A
Sbjct: 60 GLLFCPEACSLLLHNFCIYHISPPGHELGAATISPDDPLLSVDDLADQIAEVLNYFGLDA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLIL+SPLC APSWTEWLYNKV+SNLLYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILISPLCNAPSWTEWLYNKVLSNLLYYYGMCGV 179
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
VKELLLKRYFSK E G++QVPESD VQAC+RLLDERQ NVW FLEAINGR DIS GLR
Sbjct: 180 VKELLLKRYFSK-EALGSSQVPESDAVQACKRLLDERQGLNVWRFLEAINGRQDISNGLR 238
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
KL C SLIFVGE+SPFH E++ MTS++DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL
Sbjct: 239 KLLCCSLIFVGENSPFHFESLDMTSELDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 298
Query: 301 MGYGLYR-PTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 345
GYG+YR P LSVSPRS LSP CISPELLSPESMGLKLKPIKTRIS
Sbjct: 299 TGYGMYRPPKLSVSPRSTLSPICISPELLSPESMGLKLKPIKTRIS 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450343|ref|XP_004142922.1| PREDICTED: pollen-specific protein SF21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/342 (83%), Positives = 311/342 (90%), Gaps = 2/342 (0%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVS+DME+ GK+ L+KT +G +SVT+ GD DKPAL+TYPDLALN+M CFQGL F
Sbjct: 4 SSDSVSVDMESISCGGKEYLVKTCYGVVSVTVVGDLDKPALITYPDLALNHMFCFQGLMF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAAAI D+PVLS DDLADQIAEVLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAAAICPDDPVLSADDLADQIAEVLNYFGLSAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMK+RHRV GLIL+SP+C AP WTEWLYNKVMSNLLY+YGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKHRHRVHGLILISPICTAPCWTEWLYNKVMSNLLYFYGMCGVVKEL 183
Query: 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 244
LLKRYFSK + RG +QVPESD+VQACRR LDERQSSNVW FLEA+NGRPDISEGLRKL+C
Sbjct: 184 LLKRYFSK-DARGCSQVPESDLVQACRRSLDERQSSNVWRFLEAMNGRPDISEGLRKLKC 242
Query: 245 RSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304
RSLIFVG+ SPFHSEA HMT K+DRRYSALVEVQ+CGSMVTEEQP AMLIPMEYFLMGYG
Sbjct: 243 RSLIFVGDRSPFHSEAHHMTVKLDRRYSALVEVQSCGSMVTEEQPDAMLIPMEYFLMGYG 302
Query: 305 LYRPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 345
+YRP+ SVSPRSPLSP CI+PELLSPESMGLKLKPIKTRIS
Sbjct: 303 MYRPSHFSVSPRSPLSPSCIAPELLSPESMGLKLKPIKTRIS 344
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| TAIR|locus:2181905 | 344 | NDL2 "AT5G11790" [Arabidopsis | 0.982 | 0.997 | 0.794 | 6.4e-147 | |
| TAIR|locus:2165101 | 346 | NDL1 "AT5G56750" [Arabidopsis | 0.985 | 0.994 | 0.769 | 4.2e-143 | |
| TAIR|locus:2050404 | 347 | NDL3 "AT2G19620" [Arabidopsis | 0.968 | 0.974 | 0.705 | 3.3e-134 | |
| UNIPROTKB|Q3SYX0 | 384 | NDRG1 "Protein NDRG1" [Bos tau | 0.787 | 0.716 | 0.314 | 1.9e-35 | |
| UNIPROTKB|Q641F2 | 396 | ndrg1-a "Protein NDRG1-A" [Xen | 0.787 | 0.694 | 0.321 | 2.4e-35 | |
| UNIPROTKB|F1MS38 | 384 | NDRG1 "Protein NDRG1" [Bos tau | 0.787 | 0.716 | 0.311 | 8.3e-35 | |
| UNIPROTKB|E1BYD4 | 402 | NDRG1 "Uncharacterized protein | 0.787 | 0.684 | 0.301 | 1.1e-34 | |
| MGI|MGI:1341799 | 394 | Ndrg1 "N-myc downstream regula | 0.782 | 0.692 | 0.322 | 1.3e-34 | |
| RGD|1307303 | 394 | Ndrg1 "N-myc downstream regula | 0.782 | 0.692 | 0.322 | 1.7e-34 | |
| UNIPROTKB|E2RMB9 | 384 | NDRG1 "Uncharacterized protein | 0.787 | 0.716 | 0.307 | 2.2e-34 |
| TAIR|locus:2181905 NDL2 "AT5G11790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
Identities = 274/345 (79%), Positives = 305/345 (88%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDME G+++L++T++G + V + GD DKPAL+TYPD+ALNYM CFQ
Sbjct: 1 MADSS-DSVSIDMEALSLGGQEHLVETTYGPVCVAVCGDPDKPALITYPDIALNYMFCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GL FCPEA SLLLHNFCIYHI+P GHE GA IS D P+LS DDLADQI EVLN+FGLGA
Sbjct: 60 GLLFCPEASSLLLHNFCIYHISPLGHELGAPMISVDAPLLSADDLADQIVEVLNYFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLILVSPLC+APSW+EWL NKVMSNLLYYYG CGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCQAPSWSEWLCNKVMSNLLYYYGTCGV 179
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
VKE+LLKRYFSK EVRGN VPESDIVQ CRRLL ERQS+NVW FLEAINGR D+SEGLR
Sbjct: 180 VKEMLLKRYFSK-EVRGNGHVPESDIVQECRRLLSERQSTNVWRFLEAINGRVDLSEGLR 238
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
KLQCR+LIF+GE+S +HSEAVHMT+K+DRRY ALVEVQ GS+V+EEQP AM+IPMEYFL
Sbjct: 239 KLQCRTLIFIGENSAYHSEAVHMTTKLDRRYGALVEVQGSGSLVSEEQPQAMIIPMEYFL 298
Query: 301 MGYGLYRPTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 345
MGYGLYRPT SVSPRSPLSP ISPELLSPE+MGLKLKPIKTR++
Sbjct: 299 MGYGLYRPTQSVSPRSPLSPTRISPELLSPENMGLKLKPIKTRLA 343
|
|
| TAIR|locus:2165101 NDL1 "AT5G56750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 267/347 (76%), Positives = 303/347 (87%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
M DS +VS+D+ T GK++ +KT+ G +SV +YGD++KPAL+TYPDLALN+MSCFQ
Sbjct: 1 MTDSYG-AVSVDVGTIYLGGKEHRVKTASGVVSVIVYGDREKPALITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEA SLLLHNFCIYHI+PPGHE GAA I ++ V S ++LADQI EVLN FGLG
Sbjct: 60 GLFFCPEAASLLLHNFCIYHISPPGHELGAAPICPNDSVPSAENLADQILEVLNFFGLGV 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMK+R RVLGLILVSPLCKAPSW+EW YNKV++NLLYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKHRERVLGLILVSPLCKAPSWSEWFYNKVITNLLYYYGMCGV 179
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
VKE LL+RYFSK EVRGN ++PESDI QACRRLLDERQ NV FL+AI+ RPDIS GL+
Sbjct: 180 VKEFLLQRYFSK-EVRGNVEIPESDIAQACRRLLDERQGINVLRFLDAIDRRPDISSGLK 238
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
KL+CR+LIF+G+ SPF+SEAVHM + +DR Y ALVEVQACGSMVTEEQPHAMLIPMEYFL
Sbjct: 239 KLKCRTLIFIGDQSPFYSEAVHMAATLDRGYCALVEVQACGSMVTEEQPHAMLIPMEYFL 298
Query: 301 MGYGLYRPTL-SVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISA 346
MGYGLYRP+L S SPRSPLSP CISPELLSPESMGLKLKPIKTRISA
Sbjct: 299 MGYGLYRPSLFSESPRSPLSPSCISPELLSPESMGLKLKPIKTRISA 345
|
|
| TAIR|locus:2050404 NDL3 "AT2G19620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
Identities = 240/340 (70%), Positives = 294/340 (86%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+++VS+D+E GK++ +KT HGS+SV +YGDQ+KPAL+TYPD+ALNYMSCFQGLF C
Sbjct: 5 NNAVSLDIEEICNGGKEHHVKTCHGSVSVVVYGDQEKPALITYPDVALNYMSCFQGLFLC 64
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEA SLLLHNFCIYHI+PPGHEFGAA + ++P SV+DLADQI EVLN F L AVMCMG
Sbjct: 65 PEAVSLLLHNFCIYHISPPGHEFGAAPVCSNDPSPSVEDLADQILEVLNFFSLEAVMCMG 124
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
+TAGAYIL+LFA+K++ RVLGLIL+SPLCKAPSW+EW Y KV+SNLLYYYGM G++K++
Sbjct: 125 ITAGAYILSLFAIKHKERVLGLILISPLCKAPSWSEWFYYKVVSNLLYYYGMSGLLKDIF 184
Query: 186 LKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 245
L+RYFSK E RG+++VPE D+V CRRLL ER S++ FLEA+N R D+++GL+ L+CR
Sbjct: 185 LQRYFSK-EARGSSEVPERDVVHECRRLLGERHGSSLMRFLEAVNRRHDLTDGLKSLKCR 243
Query: 246 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 305
+LIFVG+ SPFHSE +HM + +DR+YSALVEVQACGSMVTEEQPHAMLIPME+F MG+GL
Sbjct: 244 TLIFVGDQSPFHSETLHMVTALDRKYSALVEVQACGSMVTEEQPHAMLIPMEFFFMGFGL 303
Query: 306 YRP-TLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRI 344
YRP +S SPRSPLSP CISPELLSPES+GLKLKPIKTR+
Sbjct: 304 YRPGRVSDSPRSPLSPSCISPELLSPESLGLKLKPIKTRV 343
|
|
| UNIPROTKB|Q3SYX0 NDRG1 "Protein NDRG1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 94/299 (31%), Positives = 157/299 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W +K+ G + ++++ F K+E++ N +V
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQNNVEV- 207
Query: 203 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESS 254
V A R ++++ N+ F+ A NGR D+ G LQC +L+ VG+SS
Sbjct: 208 ----VHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVVGDSS 263
Query: 255 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 313
P V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 264 PAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| UNIPROTKB|Q641F2 ndrg1-a "Protein NDRG1-A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 96/299 (32%), Positives = 156/299 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F + H++
Sbjct: 38 IETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSVCHVD 96
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+ +
Sbjct: 97 APGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFALNHPS 156
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W K+ G + ++++ FSK EV N P
Sbjct: 157 MVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDMVISHLFSKDEVHSN---P 206
Query: 203 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESS 254
E +V+ R+ +L + +NV HF+++ N R D+ G L+C +L+ VG+SS
Sbjct: 207 E--LVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVVGDSS 264
Query: 255 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 313
P V SK+D + L+++ CG QP + +YF+ G G Y P S++
Sbjct: 265 PAVDAVVECNSKLDPTKTTLLKMSDCGGFPQVIQPAKLAEAFKYFVQGMG-YMPAASMT 322
|
|
| UNIPROTKB|F1MS38 NDRG1 "Protein NDRG1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/299 (31%), Positives = 156/299 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W +K+ G + ++++ F K+E++ N +V
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQNNVEV- 207
Query: 203 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESS 254
V A R ++++ N+ F+ A N R D+ G LQC +L+ VG+SS
Sbjct: 208 ----VHAYRHHVMNDMNPGNLQLFINAYNSRRDLEIERPMPGAHTVTLQCPALLVVGDSS 263
Query: 255 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 313
P V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 264 PAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| UNIPROTKB|E1BYD4 NDRG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 90/299 (30%), Positives = 155/299 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
++T HG + VT+ G ++PA++TY D+ LN+ +CF LF + + H F + H++
Sbjct: 37 VETMHGMVHVTMCGTPRGNRPAILTYHDIGLNHKTCFNPLFNFEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + S+D LA+ + +L FGL +++ MG AGAY+LT FA+ +
Sbjct: 96 APGQQDGAPSFQAGYIYPSMDQLAEMLPGILKQFGLKSIIGMGTGAGAYVLTRFALNHPD 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W K+ G + +L++ F K+E+ N
Sbjct: 156 MVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDLVISHLFGKEEIHSN---- 204
Query: 203 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLR--KLQCRSLIFVGESS 254
D++ R+ ++++ +N+ F+ + N R D+ GL LQC L+ VG+SS
Sbjct: 205 -HDLIHTYRQHIINDMNQTNLHLFVNSYNSRRDLEIERPVPGLNVVTLQCPVLLVVGDSS 263
Query: 255 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 313
P V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 264 PAVDAVVECNSKLDPTRTTLLKMADCGGLPQVSQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| MGI|MGI:1341799 Ndrg1 "N-myc downstream regulated gene 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 97/301 (32%), Positives = 158/301 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 96 APGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLIL--VSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQ 200
V GL+L V+P C A W +W +K+ G + ++++ F K+E+ N +
Sbjct: 156 MVEGLVLMNVNP-C-AEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEIHNNVE 206
Query: 201 VPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGE 252
V V R+ +L++ SN+ F+ A N R D+ G LQC +L+ VG+
Sbjct: 207 V-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGD 261
Query: 253 SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSV 312
+SP V SK+D + L+++ CG + QP + +YF+ G G Y P+ S+
Sbjct: 262 NSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASM 320
Query: 313 S 313
+
Sbjct: 321 T 321
|
|
| RGD|1307303 Ndrg1 "N-myc downstream regulated 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 97/301 (32%), Positives = 158/301 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 96 APGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHKFGLKSVIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLIL--VSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQ 200
V GL+L V+P C A W +W +K+ G + ++++ F K+E+ N +
Sbjct: 156 MVEGLVLMNVNP-C-AEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEIHSNVE 206
Query: 201 VPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGE 252
V V R+ +L++ SN+ F+ A N R D+ G LQC +L+ VG+
Sbjct: 207 V-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGD 261
Query: 253 SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSV 312
+SP V SK+D + L+++ CG + QP + +YF+ G G Y P+ S+
Sbjct: 262 NSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASM 320
Query: 313 S 313
+
Sbjct: 321 T 321
|
|
| UNIPROTKB|E2RMB9 NDRG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 92/299 (30%), Positives = 157/299 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETVHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL+ FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPVGYMYPSMDQLAEMLPGVLHQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
V GL+L++ A W +W +K+ G + ++++ F K+E++ N +V
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQNNVEV- 207
Query: 203 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESS 254
V R+ ++++ N+ F+ A N R D+ G LQC +L+ VG+SS
Sbjct: 208 ----VHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPGAHTVTLQCPALLVVGDSS 263
Query: 255 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 313
P V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 264 PAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O23969 | SF21_HELAN | No assigned EC number | 0.6589 | 0.9828 | 0.9744 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00032169001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (344 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| pfam03096 | 284 | pfam03096, Ndr, Ndr family | 1e-137 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-12 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 4e-08 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-08 |
| >gnl|CDD|190521 pfam03096, Ndr, Ndr family | Back alignment and domain information |
|---|
Score = 391 bits (1006), Expect = e-137
Identities = 134/289 (46%), Positives = 174/289 (60%), Gaps = 10/289 (3%)
Query: 23 NLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH 80
++I+T GS+ VT+YGD KP ++TY DL LN+ SCFQGLF +L NFCIYH
Sbjct: 2 HIIETPCGSVHVTVYGDPKGKKPPILTYHDLGLNHKSCFQGLFNSESM-QEILQNFCIYH 60
Query: 81 INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
++ PG E GAA+ P S+DDLAD I VL+HF L +V+ MGV AGAYIL FA+K+
Sbjct: 61 VDAPGQEDGAASFPGGYPYPSLDDLADMIPVVLDHFRLKSVIGMGVGAGAYILARFALKH 120
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQ 200
RV GL+L++P A W EW YNK+MS LLYYYGM K+ LL YF K+E+ N
Sbjct: 121 PERVEGLVLINPDPNAAGWIEWFYNKLMSKLLYYYGMTDSAKDYLLAHYFGKEELSNN-- 178
Query: 201 VPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFHS 258
SDIVQ R+ L ER N+ +LEA N R D++ L C L+ VG+ SP
Sbjct: 179 ---SDIVQEYRKFLKERLNPKNLQLYLEAYNNRRDLTIERGGLETCPVLLVVGDKSPHVD 235
Query: 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 307
V SK+D + L++V CG +V +EQP + + FL G G YR
Sbjct: 236 AVVECNSKLDPTKTTLLKVADCGGLVQQEQPGKLTESFKLFLQGMGYYR 284
|
This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 66.2 bits (160), Expect = 2e-12
Identities = 41/249 (16%), Positives = 73/249 (29%), Gaps = 18/249 (7%)
Query: 55 YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN 114
+ + L + + + GH G + + S+ AD +A +L+
Sbjct: 30 FPGSSSVWRPVFKVLPALAARYRVIAPDLRGH--GRSDPAGY----SLSAYADDLAALLD 83
Query: 115 HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174
GL V+ +G + G + A+++ RV GL+L+ P L + L
Sbjct: 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAA 143
Query: 175 ------YGMCGVVKELLLKRYFSK---QEVRGNAQVPESDIVQACRRLLDERQSSNVWHF 225
LL R + R +
Sbjct: 144 LADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAA 203
Query: 226 LEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE--AVHMTSKIDRRYSALVEVQACGSM 283
D+ L ++ +LI GE P A + + + + LV + G
Sbjct: 204 ALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLVVIPGAGHF 262
Query: 284 VTEEQPHAM 292
E P A
Sbjct: 263 PHLEAPEAF 271
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 4e-08
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 15/190 (7%)
Query: 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135
F + + G + D DDLA+ + +L+ GL V +G + G I
Sbjct: 1 FDVIAFDLRGFGRSSPPK--DFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALA 58
Query: 136 FAMKYRHRVLGLILVSPLC----KAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191
+A KY RV L+LV + +P ++ + ++ E LL R
Sbjct: 59 YAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLD--NFFNRLYDSVEALLGRAIK 116
Query: 192 KQEVRGNAQVPESDIVQACRRLLDERQSSNVWH--FLEAINGR---PDISEGLRKLQCRS 246
+ + G V SD ++ R + L G D S L+ + +
Sbjct: 117 QFQALGRPFV--SDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPT 174
Query: 247 LIFVGESSPF 256
LI G+ P
Sbjct: 175 LIIWGDDDPL 184
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 6e-08
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 70 SLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAG 129
L + + + PGH G + P S++D A +A +L+ GLG V+ +G + G
Sbjct: 19 EALAAGYRVLAPDLPGH--GDSDGPPRTPY-SLEDDAADLAALLDALGLGPVVLVGHSLG 75
Query: 130 AYILTLFAMKYRHRVLGLILVSPLCKAPS 158
+ A + RV GL+L+SP +
Sbjct: 76 GAVALAAAARRPERVAGLVLISPPLRDLE 104
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.98 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.98 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.98 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.98 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.96 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.96 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.95 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.94 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.94 | |
| PLN02511 | 388 | hydrolase | 99.94 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.93 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.92 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.92 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.91 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.9 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.9 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.89 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.89 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.87 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.87 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.86 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.85 | |
| PRK10566 | 249 | esterase; Provisional | 99.84 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.84 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.82 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.8 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.8 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.76 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.76 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.75 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.75 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.73 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.72 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.7 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.69 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.67 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.66 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.65 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.65 | |
| PLN00021 | 313 | chlorophyllase | 99.62 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.62 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.61 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.6 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.6 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.54 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.54 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.53 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.52 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.51 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.51 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.49 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.47 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.44 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.44 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.41 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.39 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.38 | |
| PRK10115 | 686 | protease 2; Provisional | 99.38 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.38 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.37 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.36 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.36 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.34 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.34 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.33 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.32 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.32 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.31 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.3 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.29 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.23 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.23 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.21 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.21 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.16 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.15 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.14 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.14 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.1 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.07 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.03 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.01 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.9 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.88 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.88 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.86 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.82 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.81 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.81 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.8 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.8 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.78 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.78 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.75 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.71 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.71 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.71 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.7 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.68 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.67 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.62 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.59 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.59 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.58 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.58 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.57 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.53 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.52 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.49 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.46 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.44 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.43 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.3 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.26 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.26 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.24 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.22 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.21 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.21 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.15 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.13 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.12 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.09 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.08 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.03 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.0 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.95 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.91 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.87 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.86 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.81 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.75 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.74 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.72 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.58 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.55 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.52 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.5 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.45 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.43 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.38 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 97.37 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.35 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.35 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.32 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.32 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.3 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.28 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.24 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.08 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.04 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.02 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.98 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 96.95 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.85 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.76 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.75 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.65 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.5 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.45 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.38 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.31 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.26 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.06 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.02 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.96 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.9 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.89 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 95.89 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.7 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.48 | |
| PLN02408 | 365 | phospholipase A1 | 95.42 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.32 | |
| PLN02934 | 515 | triacylglycerol lipase | 94.99 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.92 | |
| PLN02324 | 415 | triacylglycerol lipase | 94.83 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 94.79 | |
| PLN02802 | 509 | triacylglycerol lipase | 94.33 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.27 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 94.09 | |
| PLN02753 | 531 | triacylglycerol lipase | 94.09 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.09 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.9 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 93.86 | |
| PLN02761 | 527 | lipase class 3 family protein | 93.57 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 93.21 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 92.96 | |
| PLN02847 | 633 | triacylglycerol lipase | 92.96 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 92.75 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 92.71 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 92.46 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 92.4 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 92.34 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 91.98 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 91.48 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 90.58 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 89.86 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 89.0 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 86.91 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 86.91 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 86.6 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 86.52 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 84.85 | |
| cd01714 | 202 | ETF_beta The electron transfer flavoprotein (ETF) | 83.65 | |
| TIGR03131 | 295 | malonate_mdcH malonate decarboxylase, epsilon subu | 82.27 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 82.21 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 81.38 |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=242.44 Aligned_cols=314 Identities=47% Similarity=0.794 Sum_probs=278.1
Q ss_pred CCCCCCCceEEeccCCCCCC---ceeEEeCCCeeEEEEEccCCC--CCeEEEecCCCCChhhhhcccccchhhhhhhcCC
Q 018916 1 MADSSSDSVSIDMETPPPSG---KDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN 75 (349)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~l~~~~~g~~~--~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g 75 (349)
|++ ..+....|+...-... +++.|+|..|.+++.++|+++ +|++|-.|.+|.++.++|+.+|..+.+..++.+
T Consensus 1 M~~-~~~~~~~d~~pl~~~~~~~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~- 78 (326)
T KOG2931|consen 1 MAE-LQDVVSTDIKPLLEGGATCQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH- 78 (326)
T ss_pred CCc-ccccccccchhhhcCCCcceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-
Confidence 444 3444444666555555 899999999999999999876 899999999999999999999988888877776
Q ss_pred eEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 76 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
|.|+-+|.|||-.+.+..+.+....++++++++|..++++++++.++-+|.-.|++|..+||..||++|.++||+++...
T Consensus 79 fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 79 FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 99999999999888877777878889999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCCCC
Q 018916 156 APSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPD 234 (349)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (349)
..+|.+|...+.....++..++.....+.++..+|+. +.... +.++++.|++.+... .+.++..++++++.+.|
T Consensus 159 a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~-e~~~~----~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~D 233 (326)
T KOG2931|consen 159 AKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGK-EELGN----NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRD 233 (326)
T ss_pred CchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhcc-ccccc----cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999998 54433 889999999988775 56889999999999988
Q ss_pred hhhhcccc----CCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhccccccC-
Q 018916 235 ISEGLRKL----QCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT- 309 (349)
Q Consensus 235 ~~~~l~~i----~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~- 309 (349)
+....... +||+|++.|++.+.++.+.++..++...+..+..+.++|-.+..++|.++++.+.-|++++|+.++.
T Consensus 234 L~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s~~ 313 (326)
T KOG2931|consen 234 LSIERPKLGTTLKCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPSAS 313 (326)
T ss_pred ccccCCCcCccccccEEEEecCCCchhhhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCcccccc
Confidence 87665554 4999999999999999999999999988899999999999999999999999999999999999875
Q ss_pred CCCCCCCCCCCC
Q 018916 310 LSVSPRSPLSPC 321 (349)
Q Consensus 310 ~~~~p~~~~~~~ 321 (349)
-.+.++++.+++
T Consensus 314 ~~~~~Rsr~~s~ 325 (326)
T KOG2931|consen 314 MTRLPRSRTSST 325 (326)
T ss_pred cccCcccccCCC
Confidence 666777776554
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=249.97 Aligned_cols=266 Identities=16% Similarity=0.174 Sum_probs=174.4
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC---C
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD---D 96 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~---~ 96 (349)
.+.++++.++.+++|...|++ +++|||+||+++++.. |...+ ..+.+.|+|+++|+||||.|+.+.+. .
T Consensus 8 ~~~~~~~~~~~~i~y~~~G~~-~~~vlllHG~~~~~~~------w~~~~-~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~ 79 (294)
T PLN02824 8 VETRTWRWKGYNIRYQRAGTS-GPALVLVHGFGGNADH------WRKNT-PVLAKSHRVYAIDLLGYGYSDKPNPRSAPP 79 (294)
T ss_pred CCCceEEEcCeEEEEEEcCCC-CCeEEEECCCCCChhH------HHHHH-HHHHhCCeEEEEcCCCCCCCCCCccccccc
Confidence 456788889999999998853 5899999999998865 53443 44566789999999999999754221 1
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC---hhHHh--hhhhhhHH
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWL--YNKVMSNL 171 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~--~~~~~~~~ 171 (349)
...++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++...... ..... ....+...
T Consensus 80 ~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T PLN02824 80 NSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNL 159 (294)
T ss_pred cccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHH
Confidence 23589999999999999999999999999999999999999999999999999998653210 00000 00000011
Q ss_pred HHhcCc---------chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh--cCCCChhhhcc
Q 018916 172 LYYYGM---------CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLR 240 (349)
Q Consensus 172 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 240 (349)
+..... .......++...+.. . ....++..+.+.... ............+ .......+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (294)
T PLN02824 160 LRETAVGKAFFKSVATPETVKNILCQCYHD-D-----SAVTDELVEAILRPG--LEPGAVDVFLDFISYSGGPLPEELLP 231 (294)
T ss_pred HhchhHHHHHHHhhcCHHHHHHHHHHhccC-h-----hhccHHHHHHHHhcc--CCchHHHHHHHHhccccccchHHHHh
Confidence 000000 000000111111111 0 011222222222111 1111111111111 11122345678
Q ss_pred ccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 241 KLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++++|+|+|+|++|+++ ...+.+.+.+++ .++++++++||++++|+|+++++.|.+|++++
T Consensus 232 ~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 232 AVKCPVLIAWGEKDPWEPVELGRAYANFDAV--EDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred hcCCCeEEEEecCCCCCChHHHHHHHhcCCc--cceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 99999999999999998 455566666665 89999999999999999999999999999863
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=251.08 Aligned_cols=279 Identities=14% Similarity=0.223 Sum_probs=179.9
Q ss_pred eEEeccCCCCCCceeEEeCCCe-eEEEEEccCC----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECC
Q 018916 9 VSIDMETPPPSGKDNLIKTSHG-SLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP 83 (349)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~-~l~~~~~g~~----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~ 83 (349)
..++.+...+.....++..++. +++|...|++ .+|+|||+||++.+... |...+ ..+.++|+|+++|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~------w~~~~-~~L~~~~~via~Dl 122 (360)
T PLN02679 50 GGVEAELEEIYERCKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH------WRRNI-GVLAKNYTVYAIDL 122 (360)
T ss_pred ccccccHHHhhccCceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHH------HHHHH-HHHhcCCEEEEECC
Confidence 4455555666667778887777 9999999965 56899999999988765 43333 45667899999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH-hhhcccceeEEecCCCCCCCh---
Q 018916 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSW--- 159 (349)
Q Consensus 84 ~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~--- 159 (349)
||||.|+.+. ...++++++++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++.......
T Consensus 123 ~G~G~S~~~~---~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~ 199 (360)
T PLN02679 123 LGFGASDKPP---GFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVV 199 (360)
T ss_pred CCCCCCCCCC---CccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcccccccccc
Confidence 9999987431 235899999999999999999999999999999999999887 479999999999986532110
Q ss_pred hHHhhhh-----hhhHHHHh-cCcch-hH----HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHH
Q 018916 160 TEWLYNK-----VMSNLLYY-YGMCG-VV----KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA 228 (349)
Q Consensus 160 ~~~~~~~-----~~~~~~~~-~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (349)
..+.... .....+.. ..... .. ....+..++.. .+... ....++..+.+...... ..........
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 275 (360)
T PLN02679 200 DDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLS-VYGNK-EAVDDELVEIIRGPADD--EGALDAFVSI 275 (360)
T ss_pred chHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHH-hccCc-ccCCHHHHHHHHhhccC--CChHHHHHHH
Confidence 1111000 00000000 00000 00 00011111110 00000 01123333333221111 1111111111
Q ss_pred hc--CCCChhhhccccCCceEEEEeCCCccchhH-------HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHH
Q 018916 229 IN--GRPDISEGLRKLQCRSLIFVGESSPFHSEA-------VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYF 299 (349)
Q Consensus 229 ~~--~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~-------~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 299 (349)
.. ...+....+.++++|+|+|+|++|.+++.. ..+.+.+++ .++++++++||++++|+|+++++.|.+|
T Consensus 276 ~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~--~~l~~i~~aGH~~~~E~Pe~~~~~I~~F 353 (360)
T PLN02679 276 VTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN--VTLYVLEGVGHCPHDDRPDLVHEKLLPW 353 (360)
T ss_pred HhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc--eEEEEcCCCCCCccccCHHHHHHHHHHH
Confidence 11 123445668899999999999999988321 234555676 9999999999999999999999999999
Q ss_pred Hhhc
Q 018916 300 LMGY 303 (349)
Q Consensus 300 l~~~ 303 (349)
|+++
T Consensus 354 L~~~ 357 (360)
T PLN02679 354 LAQL 357 (360)
T ss_pred HHhc
Confidence 9875
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=246.76 Aligned_cols=276 Identities=9% Similarity=0.012 Sum_probs=174.2
Q ss_pred CCceEEeccCCCCCCceeEEeCCC-----eeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEE
Q 018916 6 SDSVSIDMETPPPSGKDNLIKTSH-----GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH 80 (349)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~i~~~~-----~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~ 80 (349)
+++.-.+..++++..+ +++.++ .+++|...|++++|+|||+||++.++.. |...+..+.++||+|++
T Consensus 7 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~------w~~~~~~L~~~gy~vi~ 78 (302)
T PRK00870 7 PDSRFENLPDYPFAPH--YVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYL------YRKMIPILAAAGHRVIA 78 (302)
T ss_pred CcccccCCcCCCCCce--eEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhh------HHHHHHHHHhCCCEEEE
Confidence 3444455666677544 555555 5799999997778999999999877655 54444444457999999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh-
Q 018916 81 INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW- 159 (349)
Q Consensus 81 ~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~- 159 (349)
+|+||||.|+.+ .....++++++++++.+++++++.++++++||||||.+|+.+|.++|++|++++++++.......
T Consensus 79 ~Dl~G~G~S~~~--~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 79 PDLIGFGRSDKP--TRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP 156 (302)
T ss_pred ECCCCCCCCCCC--CCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc
Confidence 999999998743 22235899999999999999999999999999999999999999999999999999975432110
Q ss_pred -hHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc--------
Q 018916 160 -TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN-------- 230 (349)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 230 (349)
.... ........ ..... ....++.. .... ...++....+..................+.
T Consensus 157 ~~~~~--~~~~~~~~--~~~~~----~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T PRK00870 157 MPDAF--WAWRAFSQ--YSPVL----PVGRLVNG-GTVR---DLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPA 224 (302)
T ss_pred chHHH--hhhhcccc--cCchh----hHHHHhhc-cccc---cCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcc
Confidence 0000 00000000 00000 00001000 0000 001111111110000000000000000000
Q ss_pred --CCCChhhhccccCCceEEEEeCCCccc-hhHHHHHHHhcccc-eeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 231 --GRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRY-SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 231 --~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
...+....+.++++|+++|+|++|+++ ...+.+.+.+++.. ..+++++++||++++|+|+++++.|.+|+++.
T Consensus 225 ~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 225 VAANRAAWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred hHHHHHHHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 000112346789999999999999998 33466888888621 23889999999999999999999999999864
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=231.33 Aligned_cols=280 Identities=46% Similarity=0.773 Sum_probs=212.6
Q ss_pred eeEEeCCCeeEEEEEccCCC--CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~--~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
++.++|..|.+++.++|+.+ +|++|-.|-+|.++.++|..+|..+ ....+.+.|.|+-+|.|||....++.+.+...
T Consensus 1 eh~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~-~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFE-DMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSH-HHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcch-hHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 47899999999999999876 9999999999999999999997764 45667788999999999999888887877778
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
.|++++++++.+++++++++.++.+|.-.||.|..++|..+|++|.|+||+++.....+|.+|...+...+.+...++..
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 258 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~ 258 (349)
...+.++.++|+. ..... +.++.+.+++.+.+ ..+.++..+++++..+.|+........||+|++.|+..+..+
T Consensus 160 ~~~d~Ll~h~Fg~-~~~~~----n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~ 234 (283)
T PF03096_consen 160 SVKDYLLWHYFGK-EEEEN----NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVD 234 (283)
T ss_dssp -HHHHHHHHHS-H-HHHHC----T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHH
T ss_pred chHHhhhhccccc-ccccc----cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchh
Confidence 9999999999998 44432 67889999988876 466899999999999999998888999999999999999998
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhccccc
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 307 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 307 (349)
.+.++.+++...+.++..++++|=.+..|+|+++++.++-||+++|+.|
T Consensus 235 ~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~~~ 283 (283)
T PF03096_consen 235 DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGYLP 283 (283)
T ss_dssp HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB--
T ss_pred hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCCcCC
Confidence 8999999999888999999999999999999999999999999999864
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=243.05 Aligned_cols=258 Identities=17% Similarity=0.175 Sum_probs=171.4
Q ss_pred eEEeCCCeeEEEEEc-cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~-g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
+++.+++.+++|... |.+++++|||+||++++... |... ...+.++|+|+++|+||||.|+.+ ...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~----~~~~~ 73 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLEL------VFPF-IEALDPDLEVIAFDVPGVGGSSTP----RHPYR 73 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHH------HHHH-HHHhccCceEEEECCCCCCCCCCC----CCcCc
Confidence 456778889999775 33455899999999988765 4333 355677899999999999999743 13579
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhh-hhhhHHHHhcCcchh
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN-KVMSNLLYYYGMCGV 180 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 180 (349)
++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++............. ............. .
T Consensus 74 ~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 152 (276)
T TIGR02240 74 FPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS-H 152 (276)
T ss_pred HHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc-c
Confidence 9999999999999999999999999999999999999999999999999987643210000000 0000000000000 0
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
.. .....++.. ... ..++.......................... .+..+.+.++++|+++|+|++|+++ .
T Consensus 153 ~~-~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~v~~~ 224 (276)
T TIGR02240 153 GI-HIAPDIYGG-AFR-----RDPELAMAHASKVRSGGKLGYYWQLFAGLG-WTSIHWLHKIQQPTLVLAGDDDPIIPLI 224 (276)
T ss_pred cc-chhhhhccc-eee-----ccchhhhhhhhhcccCCCchHHHHHHHHcC-CchhhHhhcCCCCEEEEEeCCCCcCCHH
Confidence 00 001111211 110 012222222222211111111111111111 2234557899999999999999998 4
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
..+++.+.+++ .++++++ +||++++|+|+++++.|.+|+++.
T Consensus 225 ~~~~l~~~~~~--~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 225 NMRLLAWRIPN--AELHIID-DGHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred HHHHHHHhCCC--CEEEEEc-CCCchhhccHHHHHHHHHHHHHHh
Confidence 56778888887 8899997 599999999999999999999976
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=233.77 Aligned_cols=277 Identities=15% Similarity=0.194 Sum_probs=191.4
Q ss_pred CCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
....+..++..++.+++|...|++++|.|+|+||+.....+ |+.+...+..+||+|+++|+||+|.|+.| ..
T Consensus 19 ~~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wys------wr~q~~~la~~~~rviA~DlrGyG~Sd~P--~~ 90 (322)
T KOG4178|consen 19 LSAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYS------WRHQIPGLASRGYRVIAPDLRGYGFSDAP--PH 90 (322)
T ss_pred hhhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchh------hhhhhhhhhhcceEEEecCCCCCCCCCCC--CC
Confidence 34457778888999999999999999999999999988866 55555677778899999999999999975 34
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhh-hhhhHH----
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN-KVMSNL---- 171 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~---- 171 (349)
...|++..++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|+++.....+........ ..+...
T Consensus 91 ~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 91 ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeE
Confidence 467999999999999999999999999999999999999999999999999999987763221111100 000000
Q ss_pred -HHh-----cCcchhHHHHHHHhhccccccc-----CC-----CCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCC-C
Q 018916 172 -LYY-----YGMCGVVKELLLKRYFSKQEVR-----GN-----AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP-D 234 (349)
Q Consensus 172 -~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 234 (349)
... ..+.....+.+...++.. ... .. +....++.++.+...+......+...+.+.+.... .
T Consensus 171 ~fQ~~~~~E~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 171 LFQEPGKPETELSKDDTEMLVKTFRTR-KTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred eccccCcchhhhccchhHHhHHhhhcc-ccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence 000 001111111222222222 111 00 00112333444444443333334444445544433 2
Q ss_pred hhhhccccCCceEEEEeCCCccc--h-hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--S-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
....+.++++|+++|+|+.|.+. + ....+.+.++. -.+.++++++||+++.|+|++++++|.+|+++.
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 23457789999999999999998 3 23334555555 247889999999999999999999999999875
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=240.83 Aligned_cols=267 Identities=12% Similarity=0.106 Sum_probs=172.5
Q ss_pred CCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
..+...++.++.+++|...| ++++|||+||++++... |... ...+.+.|+||++|+||||.|+.+. .
T Consensus 6 ~~~~~~~~~~g~~i~y~~~G--~g~~vvllHG~~~~~~~------w~~~-~~~L~~~~~via~D~~G~G~S~~~~----~ 72 (295)
T PRK03592 6 PGEMRRVEVLGSRMAYIETG--EGDPIVFLHGNPTSSYL------WRNI-IPHLAGLGRCLAPDLIGMGASDKPD----I 72 (295)
T ss_pred CCcceEEEECCEEEEEEEeC--CCCEEEEECCCCCCHHH------HHHH-HHHHhhCCEEEEEcCCCCCCCCCCC----C
Confidence 34566778899999999998 57899999999988755 4333 3445555799999999999997532 2
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh-hhhhhHHHHhcCc
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYGM 177 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (349)
.++++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++............ .......+.....
T Consensus 73 ~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (295)
T PRK03592 73 DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGE 152 (295)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccc
Confidence 489999999999999999999999999999999999999999999999999998543322111100 0011111111110
Q ss_pred ch-hH--HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhc----------CCCChhhhccccC
Q 018916 178 CG-VV--KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAIN----------GRPDISEGLRKLQ 243 (349)
Q Consensus 178 ~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~l~~i~ 243 (349)
.. .. ...+...++.. .... ...++....+...+... ............. ...+....+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 228 (295)
T PRK03592 153 GEEMVLEENVFIERVLPG-SILR---PLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSD 228 (295)
T ss_pred ccccccchhhHHhhcccC-cccc---cCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCC
Confidence 00 00 00111111111 1100 01222222222221111 0001111111100 0012334577899
Q ss_pred CceEEEEeCCCccc-h-hHHHHH-HHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 244 CRSLIFVGESSPFH-S-EAVHMT-SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 244 ~Pvlii~g~~D~~~-~-~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+|+|+|+|++|.++ . ...++. +.+++ .++++++++||++++|+|+++++.|.+|+++..
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQ--LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhh--cceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 99999999999998 3 333444 44565 899999999999999999999999999998764
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=238.38 Aligned_cols=271 Identities=13% Similarity=0.145 Sum_probs=169.5
Q ss_pred CCCeeEEEEEccCCC-------CCeEEEecCCCCChhhhhcccc----cchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 27 TSHGSLSVTIYGDQD-------KPALVTYPDLALNYMSCFQGLF----FCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 27 ~~~~~l~~~~~g~~~-------~p~vv~lHG~~~~~~~~~~~~~----~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
.++.+++|...|+++ +|+|||+||+++++..|....+ |. ....++.++|+||++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~-~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFG-PGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcC-CCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 356789999999655 7899999999988766532111 11 11234478899999999999998743211
Q ss_pred ---CCCCCCHHHHHHHHHHHH-HHcCCCcEE-EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 96 ---DEPVLSVDDLADQIAEVL-NHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 96 ---~~~~~~~~~~~~~l~~~l-~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
....++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.........+........
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 012489999999988855 889999985 899999999999999999999999999988643221111111111111
Q ss_pred HHHhc------Ccch---hHHHHH-HHhhcccc---cccCCCCCCchHHHH-HHHHhhh---hccchhHHHHHHHhcCCC
Q 018916 171 LLYYY------GMCG---VVKELL-LKRYFSKQ---EVRGNAQVPESDIVQ-ACRRLLD---ERQSSNVWHFLEAINGRP 233 (349)
Q Consensus 171 ~~~~~------~~~~---~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~ 233 (349)
.+... .... ...... ...++... .+... ........ .+..... ......+...+.... ..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 282 (360)
T PRK06489 206 SIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQ--APTRAAADKLVDERLAAPVTADANDFLYQWDSSR-DY 282 (360)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHh--cCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh-cc
Confidence 11100 0000 000000 00000000 00000 00111111 1111111 111222222222222 24
Q ss_pred ChhhhccccCCceEEEEeCCCccc--hhH--HHHHHHhcccceeEEEEcCC----CCcccccChhhHHHHHHHHHhhcc
Q 018916 234 DISEGLRKLQCRSLIFVGESSPFH--SEA--VHMTSKIDRRYSALVEVQAC----GSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 234 ~~~~~l~~i~~Pvlii~g~~D~~~--~~~--~~~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+..+.+.+|++|+|+|+|++|.++ +.. +.+.+.+++ .++++++++ ||+++ ++|++|++.|.+||+++.
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH--GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC--CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 667789999999999999999988 222 568888888 999999986 99997 899999999999998764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=232.31 Aligned_cols=262 Identities=14% Similarity=0.160 Sum_probs=167.2
Q ss_pred CCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
+..+..++++++.+++|...| .+++|||+||++.+... |.. +...+.++|+|+++|+||||.|+.+. .
T Consensus 12 ~~~~~~~~~~~~~~i~y~~~G--~~~~iv~lHG~~~~~~~------~~~-~~~~l~~~~~vi~~D~~G~G~S~~~~---~ 79 (286)
T PRK03204 12 YPFESRWFDSSRGRIHYIDEG--TGPPILLCHGNPTWSFL------YRD-IIVALRDRFRCVAPDYLGFGLSERPS---G 79 (286)
T ss_pred ccccceEEEcCCcEEEEEECC--CCCEEEEECCCCccHHH------HHH-HHHHHhCCcEEEEECCCCCCCCCCCC---c
Confidence 445677899999999999988 56899999999866544 422 34666778999999999999987432 2
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
..++++++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++........... .+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~ 156 (286)
T PRK03204 80 FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMK---AFSRVMSSPPV 156 (286)
T ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHH---HHHHHhccccc
Confidence 247899999999999999999999999999999999999999999999999988764322110000 00000000000
Q ss_pred c-hhH-HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhcCCC----Chhhhccc--cCCceEE
Q 018916 178 C-GVV-KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGRP----DISEGLRK--LQCRSLI 248 (349)
Q Consensus 178 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~l~~--i~~Pvli 248 (349)
. ... ...+...++.. .... ....+....+........ ..........+.... +....+.+ +++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ptli 232 (286)
T PRK03204 157 QYAILRRNFFVERLIPA-GTEH---RPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLL 232 (286)
T ss_pred hhhhhhhhHHHHHhccc-cccC---CCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEE
Confidence 0 000 01111222211 1100 111222222211111000 000000000000000 01011111 2899999
Q ss_pred EEeCCCccc-h--hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 249 FVGESSPFH-S--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 249 i~g~~D~~~-~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
|+|++|.++ + ..+.+.+.+++ .++++++++||++++|+|+++++.|.+||
T Consensus 233 I~G~~D~~~~~~~~~~~~~~~ip~--~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 233 VWGMKDVAFRPKTILPRLRATFPD--HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred EecCCCcccCcHHHHHHHHHhcCC--CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 999999886 2 34668888998 99999999999999999999999999997
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-32 Score=230.78 Aligned_cols=261 Identities=16% Similarity=0.190 Sum_probs=165.5
Q ss_pred ceeEEeCC---CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTS---HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 21 ~~~~i~~~---~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
+...++.+ +..++|...| ++|+|||+||++.+...|.. . | ..+..++++||+|+++|+||||.|+.+.. .
T Consensus 8 ~~~~~~~~~~~~~~~~y~~~g--~~~~ivllHG~~~~~~~~~~-~-~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~--~ 80 (282)
T TIGR03343 8 KFVKINEKGLSNFRIHYNEAG--NGEAVIMLHGGGPGAGGWSN-Y-Y-RNIGPFVDAGYRVILKDSPGFNKSDAVVM--D 80 (282)
T ss_pred eEEEcccccccceeEEEEecC--CCCeEEEECCCCCchhhHHH-H-H-HHHHHHHhCCCEEEEECCCCCCCCCCCcC--c
Confidence 44444444 3468888887 56899999999887655421 1 1 33456667899999999999999975321 1
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh-HH--hhhhhhhHHHHh
Q 018916 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-EW--LYNKVMSNLLYY 174 (349)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~--~~~~~~~~~~~~ 174 (349)
...+. .+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++........ .. .......... .
T Consensus 81 ~~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 158 (282)
T TIGR03343 81 EQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLY-A 158 (282)
T ss_pred ccccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHh-c
Confidence 11222 568899999999999999999999999999999999999999999999764321100 00 0000000000 0
Q ss_pred cCcchhHHHHHHHh-hcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh----cCCCChhhhccccCCceEEE
Q 018916 175 YGMCGVVKELLLKR-YFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI----NGRPDISEGLRKLQCRSLIF 249 (349)
Q Consensus 175 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i~~Pvlii 249 (349)
........ ..... .+.. . ....+..+........ ............ ....+....+.++++|+|++
T Consensus 159 ~~~~~~~~-~~~~~~~~~~-~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli 229 (282)
T TIGR03343 159 EPSYETLK-QMLNVFLFDQ-S------LITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVT 229 (282)
T ss_pred CCCHHHHH-HHHhhCccCc-c------cCcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEE
Confidence 00000010 11111 1111 0 0122222211111111 111111111110 11123445678999999999
Q ss_pred EeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 250 VGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 250 ~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+|++|.++ +..+.+.+.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 230 ~G~~D~~v~~~~~~~~~~~~~~--~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 230 WGRDDRFVPLDHGLKLLWNMPD--AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EccCCCcCCchhHHHHHHhCCC--CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99999998 566778888887 999999999999999999999999999996
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=240.18 Aligned_cols=273 Identities=13% Similarity=0.166 Sum_probs=167.4
Q ss_pred ceeEEeCCCeeEEEEEccCCC---CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQD---KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~---~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
...++.+++.+++|...|+++ +|+|||+||++++...|.... . +.......++|+|+++|+||||.|+.+. .
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~-~-~~L~~~~~~~yrVia~Dl~G~G~S~~p~---~ 251 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETL-F-PNFSDAAKSTYRLFAVDLLGFGRSPKPA---D 251 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHH-H-HHHHHHhhCCCEEEEECCCCCCCCcCCC---C
Confidence 345677788899999999754 579999999998875532211 0 1111223479999999999999987432 2
Q ss_pred CCCCHHHHHHHHH-HHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHH-hc
Q 018916 98 PVLSVDDLADQIA-EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY-YY 175 (349)
Q Consensus 98 ~~~~~~~~~~~l~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~ 175 (349)
..++++++++++. .+++.++.++++++||||||++++.+|.++|++|+++|+++++........... ........ ..
T Consensus 252 ~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~-~~~~~~~~~~~ 330 (481)
T PLN03087 252 SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQAT-QYVMRKVAPRR 330 (481)
T ss_pred CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHH-HHHHHHhcccc
Confidence 3589999999995 889999999999999999999999999999999999999998654321111000 00000000 00
Q ss_pred CcchhHHHHHHHhhcccc--cccCCCCCCchHHHHHHHHhhhh-------------ccchhHHHHHHHhc-CC----CC-
Q 018916 176 GMCGVVKELLLKRYFSKQ--EVRGNAQVPESDIVQACRRLLDE-------------RQSSNVWHFLEAIN-GR----PD- 234 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-~~----~~- 234 (349)
.+...........++... ..... ........+.+...... .........+..+. .. .+
T Consensus 331 ~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 331 VWPPIAFGASVACWYEHISRTICLV-ICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred cCCccccchhHHHHHHHHHhhhhcc-cccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 000000000000011000 00000 00011111111111100 00000001111110 00 01
Q ss_pred hhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccc-cChhhHHHHHHHHHhh
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 302 (349)
....+.++++|+|+|+|++|.++ +..+.+.+.+++ +++++++++||++++ |+|+++++.|.+|++.
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR--ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 12233478999999999999998 566778999988 999999999999996 9999999999999864
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=220.65 Aligned_cols=276 Identities=19% Similarity=0.221 Sum_probs=175.7
Q ss_pred CCCCCceeEEeCCCeeEEEE-Ec--cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 16 PPPSGKDNLIKTSHGSLSVT-IY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 16 ~~~~~~~~~i~~~~~~l~~~-~~--g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
.++.....++.+.++.-.+. .. .+.+++++|||||+|.+...|+..+ .-+.+.++|+++|++|+|+|.+|
T Consensus 61 ~~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf-------~~La~~~~vyaiDllG~G~SSRP 133 (365)
T KOG4409|consen 61 VPVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNF-------DDLAKIRNVYAIDLLGFGRSSRP 133 (365)
T ss_pred cCCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhh-------hhhhhcCceEEecccCCCCCCCC
Confidence 33444455555543322222 22 2257789999999998876655443 44556999999999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh---h-------HH
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW---T-------EW 162 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~-------~~ 162 (349)
.-..........+++-|+++....++++.+|+|||+||++|..||.+||++|+.|||++|....... . .|
T Consensus 134 ~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w 213 (365)
T KOG4409|consen 134 KFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEW 213 (365)
T ss_pred CCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHH
Confidence 6555555677799999999999999999999999999999999999999999999999998865421 1 11
Q ss_pred hh-------hhhhhHHHHhc-CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHH---HHHHH-hc
Q 018916 163 LY-------NKVMSNLLYYY-GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVW---HFLEA-IN 230 (349)
Q Consensus 163 ~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~ 230 (349)
.. ...-...++.. .+... +.+++-.. -+..-+....++.+..|.-......+.+-. ..+.. ..
T Consensus 214 ~~~~~~~~~~~nPl~~LR~~Gp~Gp~----Lv~~~~~d-~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~ 288 (365)
T KOG4409|consen 214 YKALFLVATNFNPLALLRLMGPLGPK----LVSRLRPD-RFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGW 288 (365)
T ss_pred HhhhhhhhhcCCHHHHHHhccccchH----HHhhhhHH-HHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccch
Confidence 10 00000011111 11111 11111111 111111111333322222222222222211 11111 11
Q ss_pred CCCChhhhccccC--CceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 231 GRPDISEGLRKLQ--CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 231 ~~~~~~~~l~~i~--~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+..+.+.+..++ ||+++|+|++|.+- ....++.+.+....++.++++++||.+..++|+.|++.+.++++..
T Consensus 289 Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 289 ARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 2244556666665 99999999999887 5666666665554599999999999999999999999999999763
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=225.82 Aligned_cols=261 Identities=15% Similarity=0.148 Sum_probs=170.7
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
...++++++.+++|...|+.++|+|||+||++++... |... ...+.++|+|+++|+||||.|+.+. ...+
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~------~~~~-~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~ 76 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHS------WRDL-MPPLARSFRVVAPDLPGHGFTRAPF---RFRF 76 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHH------HHHH-HHHHhhCcEEEeecCCCCCCCCCcc---ccCC
Confidence 4456788999999999997778999999999888765 3232 4556778999999999999987432 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC-hhHHhhhhhhhHHHHhcCcch
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-WTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 179 (349)
+++++++++.+++++++.++++++||||||.+++.+|.++|+++++++++++...... ...... ..............
T Consensus 77 ~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 155 (278)
T TIGR03056 77 TLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLF-PYMARVLACNPFTP 155 (278)
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccccccc-chhhHhhhhcccch
Confidence 9999999999999999999999999999999999999999999999999988654211 000000 00000000000000
Q ss_pred hHHH------HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcC--CCChhhhccccCCceEEEEe
Q 018916 180 VVKE------LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING--RPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 180 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~g 251 (349)
.... .....++..... ...+.....+..... ...........+.. .......+.++++|+++|+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g 228 (278)
T TIGR03056 156 PMMSRGAADQQRVERLIRDTGS-----LLDKAGMTYYGRLIR--SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAG 228 (278)
T ss_pred HHHHhhcccCcchhHHhhcccc-----ccccchhhHHHHhhc--CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEe
Confidence 0000 000000000000 001111111111111 00011111111111 11234557789999999999
Q ss_pred CCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 252 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 252 ~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++|.++ ...+.+.+.+++ ++++.++++||++++|+|+++++.|.+|++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPT--ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCcccCHHHHHHHHHhccC--CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999998 455667777887 899999999999999999999999999985
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=225.80 Aligned_cols=233 Identities=11% Similarity=0.078 Sum_probs=151.4
Q ss_pred eEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-CcEE
Q 018916 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GAVM 122 (349)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~v~ 122 (349)
+|||+||++.+... |...+..+.+++|+|+++|+||||.|+.+. ...++++++++|+.++++.++. ++++
T Consensus 5 ~vvllHG~~~~~~~------w~~~~~~L~~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~~ 75 (255)
T PLN02965 5 HFVFVHGASHGAWC------WYKLATLLDAAGFKSTCVDLTGAGISLTDS---NTVSSSDQYNRPLFALLSDLPPDHKVI 75 (255)
T ss_pred EEEEECCCCCCcCc------HHHHHHHHhhCCceEEEecCCcCCCCCCCc---cccCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 59999999977644 544444554789999999999999986421 2358899999999999999987 4999
Q ss_pred EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC---hhHHhh-hhhhhHHHHh---cCc-ch----hHHHHHH-Hhh
Q 018916 123 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLY-NKVMSNLLYY---YGM-CG----VVKELLL-KRY 189 (349)
Q Consensus 123 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~-~~~~~~~~~~---~~~-~~----~~~~~~~-~~~ 189 (349)
++||||||.+++.+|.++|++|+++|++++....+. ...+.. .......+.. ... .. ....... ..+
T Consensus 76 lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
T PLN02965 76 LVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY 155 (255)
T ss_pred EEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHH
Confidence 999999999999999999999999999998643221 111100 0000000000 000 00 0000000 001
Q ss_pred cccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHh
Q 018916 190 FSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI 267 (349)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~ 267 (349)
+.. . ..+........+........ ... .+....+..+++|+++|+|++|.++ ...+.+.+.+
T Consensus 156 ~~~-~--------~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~ 219 (255)
T PLN02965 156 YNQ-S--------PLEDYTLSSKLLRPAPVRAF----QDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW 219 (255)
T ss_pred hcC-C--------CHHHHHHHHHhcCCCCCcch----hhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC
Confidence 111 0 00001111111110001000 000 1122345578999999999999998 4567788899
Q ss_pred cccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 268 DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 268 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++ +++++++++||++++|+|++|++.|.+|++.+
T Consensus 220 ~~--a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 220 PP--AQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred Cc--ceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 98 89999999999999999999999999999875
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-31 Score=220.48 Aligned_cols=239 Identities=18% Similarity=0.171 Sum_probs=151.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
++|+|||+||+++++.. |.... ..+ ++|+|+++|+||||.|..+. ..+++++++++.+++++++.++
T Consensus 1 ~~p~vvllHG~~~~~~~------w~~~~-~~l-~~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~l~~~l~~~~~~~ 67 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQD------WQPVG-EAL-PDYPRLYIDLPGHGGSAAIS-----VDGFADVSRLLSQTLQSYNILP 67 (242)
T ss_pred CCCEEEEECCCCCChHH------HHHHH-HHc-CCCCEEEecCCCCCCCCCcc-----ccCHHHHHHHHHHHHHHcCCCC
Confidence 36789999999998866 43333 445 47999999999999987432 2489999999999999999999
Q ss_pred EEEEEechhHHHHHHHHHhhhcc-cceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCC
Q 018916 121 VMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNA 199 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
++++||||||.+|+.+|.++|+. |++++++++...................+.. .+...........++....+..
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 144 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQ-RFRQEPLEQVLADWYQQPVFAS-- 144 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHH-HhccCcHHHHHHHHHhcchhhc--
Confidence 99999999999999999999764 9999999877544322211111100000000 0000000112222222101110
Q ss_pred CCCchHHHHHHHHhhhhccchhHHHHHHHh--cCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEE
Q 018916 200 QVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEV 277 (349)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i 277 (349)
. .......+................... ....+..+.+.++++|+++|+|++|..+. .+.+.. + ++++++
T Consensus 145 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~---~~~~~~-~--~~~~~i 216 (242)
T PRK11126 145 -L-NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ---ALAQQL-A--LPLHVI 216 (242)
T ss_pred -c-CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH---HHHHHh-c--CeEEEe
Confidence 0 111112211111111111122222221 12235556788999999999999998652 233322 3 899999
Q ss_pred cCCCCcccccChhhHHHHHHHHHhhc
Q 018916 278 QACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 278 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++||++++|+|+++++.|.+|++++
T Consensus 217 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 217 PNAGHNAHRENPAAFAASLAQILRLI 242 (242)
T ss_pred CCCCCchhhhChHHHHHHHHHHHhhC
Confidence 99999999999999999999999763
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=221.41 Aligned_cols=247 Identities=21% Similarity=0.341 Sum_probs=170.0
Q ss_pred EEEEEccCC-CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 32 LSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 32 l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
++|...|++ ++|+|||+||++.+... |... ...+.++|+|+++|+||||.|..+ ...++++++++++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~------~~~~-~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~ 70 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRM------WDPV-LPALTPDFRVLRYDKRGHGLSDAP----EGPYSIEDLADDVL 70 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhh------HHHH-HHHhhcccEEEEecCCCCCCCCCC----CCCCCHHHHHHHHH
Confidence 577777865 67899999999888754 4333 456678999999999999998632 23579999999999
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhc
Q 018916 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF 190 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (349)
++++.++.++++++||||||++++.+|.++|+++++++++++.........+.... ..+......... +.....++
T Consensus 71 ~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~ 146 (251)
T TIGR02427 71 ALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARI---AAVRAEGLAALA-DAVLERWF 146 (251)
T ss_pred HHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHH---hhhhhccHHHHH-HHHHHHHc
Confidence 99999999999999999999999999999999999999999765433222211100 001111111111 11222333
Q ss_pred ccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhc
Q 018916 191 SKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 268 (349)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~ 268 (349)
.. .+.. ......+.+...+.......+......+.. .+..+.+.++++|+++++|++|.++ +..+.+.+.++
T Consensus 147 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 147 TP-GFRE----AHPARLDLYRNMLVRQPPDGYAGCCAAIRD-ADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred cc-cccc----CChHHHHHHHHHHHhcCHHHHHHHHHHHhc-ccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 32 2211 122222333333322222233332333322 3455667889999999999999998 45566778787
Q ss_pred ccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 269 RRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 269 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+ .+++.++++||++++++|+++++.|.+|++
T Consensus 221 ~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 221 G--ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred C--ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 6 899999999999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=226.72 Aligned_cols=246 Identities=13% Similarity=0.103 Sum_probs=155.5
Q ss_pred EEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 018916 32 LSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE 111 (349)
Q Consensus 32 l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~ 111 (349)
++|...|. +.|+|||+||+++++.. |... ...+.++|+|+++|+||||.|..+ ..++++++++++.+
T Consensus 4 ~~y~~~G~-g~~~ivllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l~~ 70 (256)
T PRK10349 4 IWWQTKGQ-GNVHLVLLHGWGLNAEV------WRCI-DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAVLQ 70 (256)
T ss_pred cchhhcCC-CCCeEEEECCCCCChhH------HHHH-HHHHhcCCEEEEecCCCCCCCCCC-----CCCCHHHHHHHHHh
Confidence 66777772 33579999999988866 4333 455677899999999999998632 23788888777653
Q ss_pred HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh-hhhhhHHHHhcCcchhHHHHHHHhhc
Q 018916 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYGMCGVVKELLLKRYF 190 (349)
Q Consensus 112 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (349)
++.++++++||||||.+|+.+|.++|++|+++|++++.+.......+.. .......+... +.... ......++
T Consensus 71 ----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 144 (256)
T PRK10349 71 ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQ-LSDDF-QRTVERFL 144 (256)
T ss_pred ----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHH-HHhch-HHHHHHHH
Confidence 4678999999999999999999999999999999998644311100000 00000000000 00000 01111121
Q ss_pred ccccccCCCCCCchHHHHHHHHhhhhccch---hHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHH
Q 018916 191 SKQEVRGNAQVPESDIVQACRRLLDERQSS---NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 265 (349)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~ 265 (349)
.. ..... .........+.......... ........+. ..+..+.+.++++|+|+|+|++|.++ +..+.+.+
T Consensus 145 ~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 220 (256)
T PRK10349 145 AL-QTMGT--ETARQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 220 (256)
T ss_pred HH-HHccC--chHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHH
Confidence 11 00000 00111111111111111111 1111122222 24666788899999999999999988 45566778
Q ss_pred HhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 266 KIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 266 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
.+++ +++++++++||++++|+|++|++.|.+|-++
T Consensus 221 ~i~~--~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 221 LWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred hCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 8887 9999999999999999999999999999765
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=228.35 Aligned_cols=263 Identities=11% Similarity=0.065 Sum_probs=167.1
Q ss_pred eEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCH
Q 018916 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 102 (349)
..+..++.+++|...|+.++|+|||+||++.+... |... ...+.++|+|+++|+||||.|+.+.......+++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~------w~~~-~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~ 180 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYS------YRKV-LPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTL 180 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEECCCCCCCCCCCcccccccCCH
Confidence 34556778999999997778999999999988765 4333 3556779999999999999998543222235899
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC--hhHHhhhhhhhHHHHhcCcchh
Q 018916 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++...... ..... ..+...+....+..
T Consensus 181 ~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l--~~~~~~l~~~~~~~- 257 (383)
T PLN03084 181 DEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTL--SEFSNFLLGEIFSQ- 257 (383)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHH--HHHHHHHhhhhhhc-
Confidence 99999999999999999999999999999999999999999999999998754321 11100 00000000000000
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccch--hHHHHHHHhcCC-CC----hhhh--ccccCCceEEEEe
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSS--NVWHFLEAINGR-PD----ISEG--LRKLQCRSLIFVG 251 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~----~~~~--l~~i~~Pvlii~g 251 (349)
.........+.. . ......++....+...+...... ......+.+... .. .... ..++++|+++|+|
T Consensus 258 ~~~~~~~~~~~~-~---~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G 333 (383)
T PLN03084 258 DPLRASDKALTS-C---GPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWG 333 (383)
T ss_pred chHHHHhhhhcc-c---CccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEee
Confidence 000000001100 0 00000122222222211111100 011111111110 00 1111 1357999999999
Q ss_pred CCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 252 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 252 ~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++|.++ +..+.+.+. .+ .++++++++||++++|+|+++++.|.+||.+
T Consensus 334 ~~D~~v~~~~~~~~a~~-~~--a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 334 LRDRWLNYDGVEDFCKS-SQ--HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CCCCCcCHHHHHHHHHh-cC--CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999988 344555555 34 8999999999999999999999999999863
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-31 Score=221.94 Aligned_cols=243 Identities=13% Similarity=0.162 Sum_probs=157.3
Q ss_pred EEEEEcc---CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018916 32 LSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (349)
Q Consensus 32 l~~~~~g---~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 108 (349)
++|+.++ +.++|+|||+||++++... |... ...+.++|+|+++|+||||.|..+ ..++++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~------~~~~-~~~l~~~~~vi~~D~~G~G~s~~~-----~~~~~~~~~~d 70 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDN------LGVL-ARDLVNDHDIIQVDMRNHGLSPRD-----PVMNYPAMAQD 70 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhH------HHHH-HHHHhhCCeEEEECCCCCCCCCCC-----CCCCHHHHHHH
Confidence 4555543 3477899999999888754 3222 355677899999999999988732 24799999999
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHh
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKR 188 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (349)
+.++++.++.++++++||||||.+++.+|.++|++|++++++++.+.....................+.... ... ..
T Consensus 71 ~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 147 (255)
T PRK10673 71 LLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR--QQA-AA 147 (255)
T ss_pred HHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH--HHH-HH
Confidence 999999999999999999999999999999999999999999865432211000000000000000010000 000 00
Q ss_pred hcccccccCCCCCCchHHHHHHHHhhhhcc----chhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHH
Q 018916 189 YFSKQEVRGNAQVPESDIVQACRRLLDERQ----SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 262 (349)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~ 262 (349)
.+.. .. ............+.... ............ ..+.+.++++|+|+|+|++|.++ ...+.
T Consensus 148 ~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~ 216 (255)
T PRK10673 148 IMRQ-HL------NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV----GWEKIPAWPHPALFIRGGNSPYVTEAYRDD 216 (255)
T ss_pred HHHH-hc------CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh----CCcccCCCCCCeEEEECCCCCCCCHHHHHH
Confidence 1110 00 01111122211111110 001111111111 12345678999999999999988 55566
Q ss_pred HHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 263 MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+.+.+++ .++++++++||++++++|+++++.|.+||.+
T Consensus 217 ~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 217 LLAQFPQ--ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred HHHhCCC--cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 7888887 9999999999999999999999999999975
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=228.72 Aligned_cols=257 Identities=15% Similarity=0.199 Sum_probs=169.1
Q ss_pred eeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
..++..++.+++|...| ++++|||+||++.+... |... ...+.++|+|+++|+||||.|+.+ ...++
T Consensus 68 ~~~~~~~~~~i~Y~~~g--~g~~vvliHG~~~~~~~------w~~~-~~~l~~~~~v~~~D~~G~G~S~~~----~~~~~ 134 (354)
T PLN02578 68 YNFWTWRGHKIHYVVQG--EGLPIVLIHGFGASAFH------WRYN-IPELAKKYKVYALDLLGFGWSDKA----LIEYD 134 (354)
T ss_pred ceEEEECCEEEEEEEcC--CCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEECCCCCCCCCCc----ccccC
Confidence 35566678899999988 56889999999988654 4333 355677899999999999998753 23589
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH-----------Hhh---hhh
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-----------WLY---NKV 167 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----------~~~---~~~ 167 (349)
.+++++++.++++.+..++++++|||+||.+++.+|.++|++|+++|++++......... ... ...
T Consensus 135 ~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 135 AMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 999999999999999889999999999999999999999999999999987653221100 000 000
Q ss_pred hhHHHHh---------cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhc---CCCC
Q 018916 168 MSNLLYY---------YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAIN---GRPD 234 (349)
Q Consensus 168 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~ 234 (349)
....+.. ........ ......+.. . ....+...+.+....... ....+...+..+. ...+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIE-SVLKSVYKD-K-----SNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYT 287 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHH-HHHHHhcCC-c-----ccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCC
Confidence 0000000 00000000 011111111 0 001122222221111100 1111222222211 1234
Q ss_pred hhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
..+.+.++++|+++|+|++|.++ ...+.+.+.+++ .+++++ ++||++++|+|+++++.|.+|++
T Consensus 288 ~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~--a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 288 LDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD--TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 55678899999999999999988 566678888887 888888 69999999999999999999986
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=236.03 Aligned_cols=261 Identities=15% Similarity=0.141 Sum_probs=163.9
Q ss_pred EEeCCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 24 LIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.+..+|.+++|..++++ .+++|||+||++.+...+ |......+.++||+|+++|+||||.|+.+ .....
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~-----~~~~~~~l~~~g~~v~~~D~~G~G~S~~~---~~~~~ 137 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFF-----FEGIARKIASSGYGVFAMDYPGFGLSEGL---HGYIP 137 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchH-----HHHHHHHHHhCCCEEEEecCCCCCCCCCC---CCCcC
Confidence 34457788999988763 357899999998775332 32333455567999999999999998742 12235
Q ss_pred CHHHHHHHHHHHHHHcCC------CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh--hHHhhhhhhhHHH
Q 018916 101 SVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW--TEWLYNKVMSNLL 172 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~ 172 (349)
+++++++|+.++++.+.. .+++|+||||||++++.++.++|++++++|+++|....... ..+.. ......+
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~-~~~~~~~ 216 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV-LQILILL 216 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH-HHHHHHH
Confidence 899999999999887653 37999999999999999999999999999999987643211 00000 0000000
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhh--hhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLL--DERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
.... .. ...+....+... ...... ........ .......+......+....+....+.++++|+|+|+
T Consensus 217 ~~~~-p~-------~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~ 286 (349)
T PLN02385 217 ANLL-PK-------AKLVPQKDLAEL-AFRDLK-KRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILH 286 (349)
T ss_pred HHHC-CC-------ceecCCCccccc-cccCHH-HHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEE
Confidence 0000 00 000000000000 000000 00000000 000011111111111111234456788999999999
Q ss_pred eCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhh----HHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA----MLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 303 (349)
|++|.++ ..++.+.+.+...++++++++++||+++.|+|++ +.+.|.+||++.
T Consensus 287 G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 287 GEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred eCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 9999998 4567788888655689999999999999999987 888899999876
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-31 Score=229.19 Aligned_cols=275 Identities=12% Similarity=0.116 Sum_probs=169.0
Q ss_pred CceeEEeCCCeeEEEEEccC-CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC--C
Q 018916 20 GKDNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD--D 96 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~-~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~--~ 96 (349)
.+..++..+|.+++|..+++ ..+++|||+||++.+... |...+..++++||+|+++|+||||.|+.+... .
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~------y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVK------YAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHH------HHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc
Confidence 34556667888999999876 356799999999876533 33444567789999999999999998743221 1
Q ss_pred CCCCCHHHHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC-hhHHhhhhhhhHH
Q 018916 97 EPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-WTEWLYNKVMSNL 171 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~ 171 (349)
...++++++++|+.++++.+ +..+++++||||||.+++.+|.++|++++++|+++|...... ...... ......
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~-~~~~~~ 183 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMA-RRILNW 183 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHH-HHHHHH
Confidence 12368999999999999876 667999999999999999999999999999999998754321 111110 000000
Q ss_pred HHhc-CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccc-----hhHHHHHHHhcCCCChhhhccccCCc
Q 018916 172 LYYY-GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQS-----SNVWHFLEAINGRPDISEGLRKLQCR 245 (349)
Q Consensus 172 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~i~~P 245 (349)
+... ....... .....+... .+.........+....+.+.+..... ..+......+.........+.++++|
T Consensus 184 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 261 (330)
T PRK10749 184 AEGHPRIRDGYA-IGTGRWRPL-PFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTP 261 (330)
T ss_pred HHHhcCCCCcCC-CCCCCCCCC-CcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCC
Confidence 0000 0000000 000000000 00000000012222222222221111 01111111111101233456788999
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcc-----cceeEEEEcCCCCcccccCh---hhHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDR-----RYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 303 (349)
+|+|+|++|.++ +..+.+.+.+++ .++++++++++||.++.|.+ +.+.+.|.+||++.
T Consensus 262 ~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 262 LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 999999999999 455667776643 23689999999999999875 56889999999875
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-30 Score=219.23 Aligned_cols=251 Identities=17% Similarity=0.264 Sum_probs=164.6
Q ss_pred EEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018916 32 LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (349)
Q Consensus 32 l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l 109 (349)
++|..+|+ .++|+|||+||+++++.. |... ...+.++|+|+++|+||||.|..+ ....++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~------~~~~-~~~l~~~~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~~~ 70 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSY------WAPQ-LDVLTQRFHVVTYDHRGTGRSPGE---LPPGYSIAHMADDV 70 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhH------HHHH-HHHHHhccEEEEEcCCCCCCCCCC---CcccCCHHHHHHHH
Confidence 46777776 467899999999988744 4233 456678999999999999998743 23458999999999
Q ss_pred HHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhh
Q 018916 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (349)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (349)
.++++.++.++++++||||||++++.++.++|++|+++|++++............ ......+.......... ......
T Consensus 71 ~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~ 148 (257)
T TIGR03611 71 LQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCF-DVRIALLQHAGPEAYVH-AQALFL 148 (257)
T ss_pred HHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHH-HHHHHHHhccCcchhhh-hhhhhh
Confidence 9999999999999999999999999999999999999999998655432111100 00011111111111100 000000
Q ss_pred cccccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHH
Q 018916 190 FSKQEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 266 (349)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~ 266 (349)
+.. .+... ......+........ ............... .+....+.++++|+++++|++|.++ +..+.+.+.
T Consensus 149 ~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 223 (257)
T TIGR03611 149 YPA-DWISE---NAARLAADEAHALAHFPGKANVLRRINALEA-FDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAA 223 (257)
T ss_pred ccc-cHhhc---cchhhhhhhhhcccccCccHHHHHHHHHHHc-CCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHh
Confidence 000 00000 000000000000000 111122222222222 3455678889999999999999998 456678888
Q ss_pred hcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 267 IDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 267 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+++ .+++.++++||++++++|+++++.|.+||+
T Consensus 224 ~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 224 LPN--AQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred cCC--ceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 887 899999999999999999999999999996
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-30 Score=226.94 Aligned_cols=266 Identities=14% Similarity=0.116 Sum_probs=162.3
Q ss_pred EeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhc------ccccchhhh---hhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 25 IKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ------GLFFCPEAC---SLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 25 i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~------~~~~~~~~~---~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
..+++.+++|...|+.+.| +||+||+.+++..+.. ..+|..++. .+..++|+||++|+||||.|..
T Consensus 41 ~~~~~~~l~y~~~G~~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---- 115 (343)
T PRK08775 41 AGLEDLRLRYELIGPAGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---- 115 (343)
T ss_pred CCCCCceEEEEEeccCCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC----
Confidence 3446778999999854444 6666666555432110 114655543 2335789999999999987641
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcE-EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH-HhhhhhhhHHHH
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLYNKVMSNLLY 173 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~ 173 (349)
..++++++++++.+++++++++++ +|+||||||+||+.+|.++|++|+++|++++......... +...........
T Consensus 116 --~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~ 193 (343)
T PRK08775 116 --VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALG 193 (343)
T ss_pred --CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcC
Confidence 247889999999999999999775 7999999999999999999999999999998765322111 110000000000
Q ss_pred -hcCcc----hhHH----------HHHHHhhcccccccCCCCCCchHHHHHHH----HhhhhccchhHHHHHHHhcCCCC
Q 018916 174 -YYGMC----GVVK----------ELLLKRYFSKQEVRGNAQVPESDIVQACR----RLLDERQSSNVWHFLEAINGRPD 234 (349)
Q Consensus 174 -~~~~~----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (349)
..... .... +.+.. .+.. ................+. ..........+.........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 268 (343)
T PRK08775 194 QLQCAEKHGLALARQLAMLSYRTPEEFEE-RFDA-PPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL--- 268 (343)
T ss_pred CCCCCchhHHHHHHHHHHHHcCCHHHHHH-HhCC-CccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh---
Confidence 00000 0000 00101 1111 000000000011111111 11111222222222222211
Q ss_pred hhhhccccCCceEEEEeCCCccc--hhHHHHHHHh-cccceeEEEEcC-CCCcccccChhhHHHHHHHHHhhcc
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI-DRRYSALVEVQA-CGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~-~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
....+.++++|+|+|+|++|.++ ....++.+.+ ++ .+++++++ +||++++|+|++|++.|.+||++.+
T Consensus 269 ~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~--a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 269 HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR--GSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC--CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 12236789999999999999988 4566788877 45 89999985 9999999999999999999998764
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-30 Score=226.77 Aligned_cols=265 Identities=12% Similarity=0.117 Sum_probs=160.4
Q ss_pred CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhh---hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEA---CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~---~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
++.+++|...|+. +.|+||++||+++++.. |...+ ..+..++|+||++|+||||.|..+... ...++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~------~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~ 96 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD------NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT-PAPFN 96 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCccc------chhhccCCCccCcCceEEEEecCCCCCCCCCCCCC-CCCCC
Confidence 5668999999862 34667777777655432 21111 133357899999999999998754221 11234
Q ss_pred HH-----HHHHHHHH----HHHHcCCCc-EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 102 VD-----DLADQIAE----VLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 102 ~~-----~~~~~l~~----~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
++ .+++++.+ +++++++++ ++|+||||||++|+.+|.++|++|+++|++++............ ......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~-~~~~~~ 175 (339)
T PRK07581 97 AARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFL-EGLKAA 175 (339)
T ss_pred CCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHH-HHHHHH
Confidence 33 24555544 668899999 47999999999999999999999999999998765432211110 111110
Q ss_pred HHh-cCc-----c----hhH---HHHHHHhhcccccccCCC--CCC----chHHHHHHH-HhhhhccchhHHHHHHHhc-
Q 018916 172 LYY-YGM-----C----GVV---KELLLKRYFSKQEVRGNA--QVP----ESDIVQACR-RLLDERQSSNVWHFLEAIN- 230 (349)
Q Consensus 172 ~~~-~~~-----~----~~~---~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 230 (349)
+.. ..+ . ... .+......+.. .+.... ... .++...... ..........+...+..+.
T Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 254 (339)
T PRK07581 176 LTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQ-AFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQR 254 (339)
T ss_pred HHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHH-HHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhh
Confidence 100 000 0 000 00010001111 100000 000 012222221 1112122233333322111
Q ss_pred ----C----CCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcC-CCCcccccChhhHHHHHHHH
Q 018916 231 ----G----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA-CGSMVTEEQPHAMLIPMEYF 299 (349)
Q Consensus 231 ----~----~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~f 299 (349)
. ..+..+.+.++++|+|+|+|++|.++ ...+.+.+.+++ ++++++++ +||++++++++++++.|.+|
T Consensus 255 ~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~~~~~~~~~~~~~ 332 (339)
T PRK07581 255 GDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFGQNPADIAFIDAA 332 (339)
T ss_pred cccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCccccccCcHHHHHHHHHH
Confidence 1 12566778899999999999999998 456678888887 89999998 99999999999999999999
Q ss_pred Hhhc
Q 018916 300 LMGY 303 (349)
Q Consensus 300 l~~~ 303 (349)
|+++
T Consensus 333 ~~~~ 336 (339)
T PRK07581 333 LKEL 336 (339)
T ss_pred HHHH
Confidence 9986
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-30 Score=227.37 Aligned_cols=275 Identities=14% Similarity=0.139 Sum_probs=172.8
Q ss_pred CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhc-------ccccchhh---hhhhcCCeEEEEECCCCC-CCCCCCC
Q 018916 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ-------GLFFCPEA---CSLLLHNFCIYHINPPGH-EFGAAAI 93 (349)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~-------~~~~~~~~---~~~l~~g~~vi~~D~~G~-G~s~~~~ 93 (349)
++.+++|..+|+. ++|+|||+||+++++..+.. .-+|..++ ..++.++|+||++|++|+ |.|..+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 5668999999952 36899999999999864321 01354433 245578999999999994 4443221
Q ss_pred CC----------CCCCCCHHHHHHHHHHHHHHcCCCc-EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHH
Q 018916 94 SD----------DEPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (349)
Q Consensus 94 ~~----------~~~~~~~~~~~~~l~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (349)
.. ....++++++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++..........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 10 1125899999999999999999999 589999999999999999999999999999987754322110
Q ss_pred hhhhhhhHHHHhc-----------Ccchh----HH----------HHHHHhhcccccccCCCC---CCchHHHHHHH---
Q 018916 163 LYNKVMSNLLYYY-----------GMCGV----VK----------ELLLKRYFSKQEVRGNAQ---VPESDIVQACR--- 211 (349)
Q Consensus 163 ~~~~~~~~~~~~~-----------~~~~~----~~----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--- 211 (349)
.. ......+... +.... .. +......|.. ....... .......+.+.
T Consensus 191 ~~-~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 191 FN-EVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGR-ELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HH-HHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCc-cccccccccCCCccchHHHHHHHH
Confidence 00 0000000000 00000 00 0011112221 1110000 00001111111
Q ss_pred --HhhhhccchhHHHHHHHhcCC-------CChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccc--eeEEEEc
Q 018916 212 --RLLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQ 278 (349)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~--~~~~~i~ 278 (349)
..........+......+... .+..+.+.+|++|+|+|+|++|.++ +..+++.+.+++.+ +++++++
T Consensus 269 ~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~ 348 (379)
T PRK00175 269 GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEID 348 (379)
T ss_pred HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 111222233333322222211 2466788999999999999999988 56777899998722 2777775
Q ss_pred -CCCCcccccChhhHHHHHHHHHhhcc
Q 018916 279 -ACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 279 -~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
++||++++|+|+++++.|.+||++..
T Consensus 349 ~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 349 SPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 89999999999999999999998863
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=224.85 Aligned_cols=271 Identities=13% Similarity=0.190 Sum_probs=168.9
Q ss_pred CCCeeEEEEEccC---CCCCeEEEecCCCCChhhh-hc----ccccchhh---hhhhcCCeEEEEECCCC--CCCCCCCC
Q 018916 27 TSHGSLSVTIYGD---QDKPALVTYPDLALNYMSC-FQ----GLFFCPEA---CSLLLHNFCIYHINPPG--HEFGAAAI 93 (349)
Q Consensus 27 ~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~-~~----~~~~~~~~---~~~l~~g~~vi~~D~~G--~G~s~~~~ 93 (349)
.+|.+++|..+|+ ..+++|||+||++.++... +. .-+|...+ ..++.++|+|+++|+|| ||.|....
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 3667899999995 3468999999999876321 11 11354332 25667899999999999 56554210
Q ss_pred --CC------CCCCCCHHHHHHHHHHHHHHcCCCc-EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh
Q 018916 94 --SD------DEPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (349)
Q Consensus 94 --~~------~~~~~~~~~~~~~l~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (349)
+. ....++++++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++............
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFN 172 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHH
Confidence 01 1235899999999999999999999 99999999999999999999999999999999876543221110
Q ss_pred hhhhhHHHHhc------Ccch-------h--HH---------HHHHHhhcccccccCCC-CC---CchHHHHHHH-----
Q 018916 165 NKVMSNLLYYY------GMCG-------V--VK---------ELLLKRYFSKQEVRGNA-QV---PESDIVQACR----- 211 (349)
Q Consensus 165 ~~~~~~~~~~~------~~~~-------~--~~---------~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~----- 211 (349)
......+... .... . .. ...+...|.. ...... .. ......+.+.
T Consensus 173 -~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 173 -EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGR-APQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred -HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCc-CcccccccccccCccchHHHHHHHHHH
Confidence 0000000000 0000 0 00 0001111221 100000 00 0000111111
Q ss_pred HhhhhccchhHHHHHHHhcCC------CChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEE-----EEc
Q 018916 212 RLLDERQSSNVWHFLEAINGR------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV-----EVQ 278 (349)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~-----~i~ 278 (349)
..+.......+......+... .+..+.+.+|++|+|+|+|++|.++ ...+.+.+.+++ .+++ +++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~--~~~~v~~~~i~~ 328 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA--AGLRVTYVEIES 328 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh--cCCceEEEEeCC
Confidence 112212222332222222221 2456788999999999999999987 567778999987 4443 456
Q ss_pred CCCCcccccChhhHHHHHHHHHh
Q 018916 279 ACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 279 ~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++||++++|+|+++++.|.+||+
T Consensus 329 ~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 329 PYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCCcchhhcCHHHHHHHHHHHhC
Confidence 89999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=215.61 Aligned_cols=263 Identities=18% Similarity=0.233 Sum_probs=164.7
Q ss_pred eEEeCCCeeEEEEEccCC-CCCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.++..+++.+.|...+++ .+++|||+||+++++..+ | ..+..++.+ ||+|+++|+||||.|..+.. ....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~-----~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~ 77 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEY-----L-ENLRELLKEEGREVIMYDQLGCGYSDQPDD-SDELW 77 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHH-----H-HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-ccccc
Confidence 356778888888887754 378999999986665442 2 233455555 89999999999999874321 11137
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh--h----hHHHHh
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV--M----SNLLYY 174 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~----~~~~~~ 174 (349)
+++++++++.+++++++.++++++||||||.+++.+|.++|+++++++++++....+.......... + ...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (288)
T TIGR01250 78 TIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKR 157 (288)
T ss_pred cHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988664432211110000 0 000000
Q ss_pred ---cC-cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHH--------HhcCCCChhhhcccc
Q 018916 175 ---YG-MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE--------AINGRPDISEGLRKL 242 (349)
Q Consensus 175 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~i 242 (349)
.. ............+... ..... .......... ..... ........ ......+..+.+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 230 (288)
T TIGR01250 158 CEASGDYDNPEYQEAVEVFYHH-LLCRT--RKWPEALKHL---KSGMN-TNVYNIMQGPNEFTITGNLKDWDITDKLSEI 230 (288)
T ss_pred HHhccCcchHHHHHHHHHHHHH-hhccc--ccchHHHHHH---hhccC-HHHHhcccCCccccccccccccCHHHHhhcc
Confidence 00 0000000000000000 00000 0000000000 00000 00000000 000112344567889
Q ss_pred CCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 243 QCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++|+++++|++|.+. ...+.+.+.+++ .++++++++||++++|+|+++++.|.+||+
T Consensus 231 ~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 231 KVPTLLTVGEFDTMTPEAAREMQELIAG--SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCCEEEEecCCCccCHHHHHHHHHhccC--CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 999999999999866 556667777777 889999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=214.99 Aligned_cols=256 Identities=13% Similarity=0.098 Sum_probs=156.5
Q ss_pred eEEeCCCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.++..+|.+++|..+.+. .++.|+|+||++.++.. |...+..+.++||+|+++|+||||.|... .....
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~------~~~~~~~l~~~g~~via~D~~G~G~S~~~---~~~~~ 74 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGR------YEELAENISSLGILVFSHDHIGHGRSNGE---KMMID 74 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccch------HHHHHHHHHhCCCEEEEccCCCCCCCCCc---cCCcC
Confidence 456668888999887653 34567777999877644 44444555567999999999999998632 12234
Q ss_pred CHHHHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcC
Q 018916 101 SVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (349)
++.++++|+.++++.+ ...+++++||||||.+|+.+|.++|++++++|+++|.......... ...........
T Consensus 75 ~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~---~~~~~~~~~~~ 151 (276)
T PHA02857 75 DFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRL---NLLAAKLMGIF 151 (276)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHH---HHHHHHHHHHh
Confidence 6666677776666543 3468999999999999999999999999999999986543211000 00000000000
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHH-hhhhc--cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCC
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRR-LLDER--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 253 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 253 (349)
........+....+.. .......+.. ..... ....+....... ..+..+.+.++++|+|+++|++
T Consensus 152 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvliv~G~~ 219 (276)
T PHA02857 152 YPNKIVGKLCPESVSR----------DMDEVYKYQYDPLVNHEKIKAGFASQVLKA--TNKVRKIIPKIKTPILILQGTN 219 (276)
T ss_pred CCCCccCCCCHhhccC----------CHHHHHHHhcCCCccCCCccHHHHHHHHHH--HHHHHHhcccCCCCEEEEecCC
Confidence 0000000000000000 0000000000 00000 000111111111 1223456788999999999999
Q ss_pred Cccc--hhHHHHHHHhcccceeEEEEcCCCCcccccCh---hhHHHHHHHHHhhc
Q 018916 254 SPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 303 (349)
Q Consensus 254 D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 303 (349)
|.++ ..++++.+.+.. +.++++++++||.++.|++ +++.+.+.+||++.
T Consensus 220 D~i~~~~~~~~l~~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 220 NEISDVSGAYYFMQHANC-NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcCChHHHHHHHHHccC-CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9999 566777777743 4899999999999999866 57889999999874
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=210.04 Aligned_cols=235 Identities=16% Similarity=0.131 Sum_probs=148.6
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
.|+|||+||++.++.. |... ...+.++|+|+++|+||||.|... ..++++++++++.+++ .+++
T Consensus 4 ~~~iv~~HG~~~~~~~------~~~~-~~~l~~~~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~----~~~~ 67 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV------FRCL-DEELSAHFTLHLVDLPGHGRSRGF-----GPLSLADAAEAIAAQA----PDPA 67 (245)
T ss_pred CceEEEEcCCCCchhh------HHHH-HHhhccCeEEEEecCCcCccCCCC-----CCcCHHHHHHHHHHhC----CCCe
Confidence 4789999999888755 3222 355677899999999999997632 2368888888776543 2789
Q ss_pred EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh--hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCC
Q 018916 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNA 199 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
+++||||||.+++.+|.++|++++++|++++.........+. ........+.. .+..... .....++....+..
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~-- 143 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQ-QLSDDYQ-RTIERFLALQTLGT-- 143 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHH-HhhhhHH-HHHHHHHHHHHhcC--
Confidence 999999999999999999999999999998875432111110 00000000000 0000000 01111111000000
Q ss_pred CCCchHHHHHHHHhhhhccc---hhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeE
Q 018916 200 QVPESDIVQACRRLLDERQS---SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL 274 (349)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~ 274 (349)
.........+...+..... ..+...+..+.. .+....+.++++|+++++|++|.++ +..+.+.+.+++ +++
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~--~~~ 219 (245)
T TIGR01738 144 -PTARQDARALKQTLLARPTPNVQVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH--SEL 219 (245)
T ss_pred -CccchHHHHHHHHhhccCCCCHHHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC--CeE
Confidence 0011111222222221111 222222333322 4556678899999999999999998 455667788887 999
Q ss_pred EEEcCCCCcccccChhhHHHHHHHHH
Q 018916 275 VEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 275 ~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
++++++||++++|+|+++++.|.+|+
T Consensus 220 ~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 220 YIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EEeCCCCCCccccCHHHHHHHHHhhC
Confidence 99999999999999999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=215.70 Aligned_cols=262 Identities=11% Similarity=0.120 Sum_probs=159.4
Q ss_pred ceeEEeC-CCeeEEEEEccCC----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+..++.. +|.+++|+.+++. .+++|||+||++.+. .| .|......+..+||+|+++|+||||.|...
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~-~~----~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~--- 104 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDI-SW----TFQSTAIFLAQMGFACFALDLEGHGRSEGL--- 104 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCc-ce----ehhHHHHHHHhCCCEEEEecCCCCCCCCCc---
Confidence 3444444 7778999887643 345799999997653 21 122222345567999999999999998632
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCC------CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh--HHhhhhh
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKV 167 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~ 167 (349)
.....+++++++|+.++++.++. .+++|+||||||.+++.++.++|++|+++|++++........ .+.. ..
T Consensus 105 ~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~ 183 (330)
T PLN02298 105 RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPI-PQ 183 (330)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHH-HH
Confidence 12235889999999999987643 369999999999999999999999999999999876432210 0000 00
Q ss_pred hhHHHHhcCcchhHHHHHHHhhc-cc-ccccCCCCCCchHHHHHHHHh--hhhccchhHHHHHHHhcCCCChhhhccccC
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYF-SK-QEVRGNAQVPESDIVQACRRL--LDERQSSNVWHFLEAINGRPDISEGLRKLQ 243 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (349)
....+.. ...... .. ...... .........+... .........................+.+++
T Consensus 184 ~~~~~~~----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 251 (330)
T PLN02298 184 ILTFVAR----------FLPTLAIVPTADLLEK--SVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVS 251 (330)
T ss_pred HHHHHHH----------HCCCCccccCCCcccc--cccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcC
Confidence 0000000 000000 00 000000 0000000000000 000000000000111110011345577899
Q ss_pred CceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChh----hHHHHHHHHHhhc
Q 018916 244 CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH----AMLIPMEYFLMGY 303 (349)
Q Consensus 244 ~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~ 303 (349)
+|+|+|+|++|.++ +..+.+.+.++..++++++++++||.++.++|+ ++.+.|.+||.+.
T Consensus 252 ~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 252 IPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 566778888765558999999999999998886 4677888999886
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=205.61 Aligned_cols=243 Identities=21% Similarity=0.270 Sum_probs=157.4
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHcCCCc
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ-IAEVLNHFGLGA 120 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~-l~~~l~~l~~~~ 120 (349)
+|+|||+||++++... |...+ ..+.+||+|+++|+||||.|+.+ .....+++++++++ +..+++.++.++
T Consensus 1 ~~~vv~~hG~~~~~~~------~~~~~-~~L~~~~~v~~~d~~g~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD------WQALI-ELLGPHFRCLAIDLPGHGSSQSP--DEIERYDFEEAAQDILATLLDQLGIEP 71 (251)
T ss_pred CCEEEEEcCCCCchhh------HHHHH-HHhcccCeEEEEcCCCCCCCCCC--CccChhhHHHHHHHHHHHHHHHcCCCe
Confidence 4789999999888755 43333 44458999999999999998643 22345789999999 788888888899
Q ss_pred EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhh----hhhhHHHHhcCcchhHHHHHHHhhccccccc
Q 018916 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN----KVMSNLLYYYGMCGVVKELLLKRYFSKQEVR 196 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
++++|||+||.+++.+|.++|++|++++++++............. ......+....... +...++....+.
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 146 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEA-----FLDDWYQQPLFA 146 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccH-----HHHHHhcCceee
Confidence 999999999999999999999999999999987654322111100 00111111111111 111121110110
Q ss_pred CCCCCCchHHHHHHHHhhhhccchhHHHHHHHh--cCCCChhhhccccCCceEEEEeCCCccc-hhHHHHHHHhccccee
Q 018916 197 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSA 273 (349)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~ 273 (349)
. .....+.....+...............+... ....+..+.+.++++|+++++|++|..+ ...+.+.+.+++ .+
T Consensus 147 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 223 (251)
T TIGR03695 147 S-QKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLPN--LT 223 (251)
T ss_pred e-cccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCCC--Cc
Confidence 0 0001222222222222212222222222211 1123444567789999999999999876 455567777776 89
Q ss_pred EEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 274 LVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 274 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++.++++||++++++|+++++.|.+|++
T Consensus 224 ~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 224 LVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 9999999999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=206.11 Aligned_cols=224 Identities=23% Similarity=0.358 Sum_probs=147.2
Q ss_pred EEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEE
Q 018916 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (349)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lv 124 (349)
|||+||++++... |...+ ..+++||+|+++|+||||.|..+. ....++++++++++.+++++++.++++++
T Consensus 1 vv~~hG~~~~~~~------~~~~~-~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSSES------WDPLA-EALARGYRVIAFDLPGHGRSDPPP--DYSPYSIEDYAEDLAELLDALGIKKVILV 71 (228)
T ss_dssp EEEE-STTTTGGG------GHHHH-HHHHTTSEEEEEECTTSTTSSSHS--SGSGGSHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred eEEECCCCCCHHH------HHHHH-HHHhCCCEEEEEecCCcccccccc--ccCCcchhhhhhhhhhccccccccccccc
Confidence 7999999988854 43443 444789999999999999987532 13458999999999999999999999999
Q ss_pred EechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc--chhHHHHHHHhhcccccccCCCCCC
Q 018916 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM--CGVVKELLLKRYFSKQEVRGNAQVP 202 (349)
Q Consensus 125 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (349)
|||+||.+++.++.++|++|+++|++++...............+...+..... ...........++..
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 141 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDG---------- 141 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH----------
T ss_pred ccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccc----------
Confidence 99999999999999999999999999998864321100000111111100000 000000011111111
Q ss_pred chHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCC
Q 018916 203 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQAC 280 (349)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~ 280 (349)
....+.+.. ....+...+.......+....+.++++|+++++|++|.++ ...+.+.+.+++ ++++.++++
T Consensus 142 -~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~ 213 (228)
T PF12697_consen 142 -DEPEDLIRS-----SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN--AELVVIPGA 213 (228)
T ss_dssp -HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT--EEEEEETTS
T ss_pred -ccccccccc-----cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC--CEEEEECCC
Confidence 111111100 1111122211100112344667788999999999999998 466667778887 999999999
Q ss_pred CCcccccChhhHHHH
Q 018916 281 GSMVTEEQPHAMLIP 295 (349)
Q Consensus 281 gH~~~~e~p~~~~~~ 295 (349)
||++++|+|++++++
T Consensus 214 gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 214 GHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSTHHHHSHHHHHHH
T ss_pred CCccHHHCHHHHhcC
Confidence 999999999999874
|
... |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=206.64 Aligned_cols=253 Identities=10% Similarity=0.083 Sum_probs=153.8
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
+|.+++|..- ++++|+|||+||++.+... |......+.++||+|+++|+||||.|... ....++++++++
T Consensus 5 ~~~~~~~~~~-~~~~p~vvliHG~~~~~~~------w~~~~~~L~~~g~~vi~~dl~g~G~s~~~---~~~~~~~~~~~~ 74 (273)
T PLN02211 5 NGEEVTDMKP-NRQPPHFVLIHGISGGSWC------WYKIRCLMENSGYKVTCIDLKSAGIDQSD---ADSVTTFDEYNK 74 (273)
T ss_pred cccccccccc-cCCCCeEEEECCCCCCcCc------HHHHHHHHHhCCCEEEEecccCCCCCCCC---cccCCCHHHHHH
Confidence 4556666662 2567899999999888744 54444444457999999999999986521 123479999999
Q ss_pred HHHHHHHHcC-CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHH
Q 018916 108 QIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (349)
Q Consensus 108 ~l~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
++.++++.++ .++++|+||||||.++..++.++|++|+++|++++...................+.... .... .
T Consensus 75 ~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~---~ 149 (273)
T PLN02211 75 PLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFG--DVYE---L 149 (273)
T ss_pred HHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhc--ccee---e
Confidence 9999999885 58999999999999999999999999999999987654322111100000000000000 0000 0
Q ss_pred HhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHH---------HHhcCCCChhhhcccc-CCceEEEEeCCCcc
Q 018916 187 KRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFL---------EAINGRPDISEGLRKL-QCRSLIFVGESSPF 256 (349)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~ 256 (349)
...+.. ...........+.... .+....+....... ..+.. .+..+...++ ++|+++|.|++|..
T Consensus 150 ~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vP~l~I~g~~D~~ 224 (273)
T PLN02211 150 GFGLGP-DQPPTSAIIKKEFRRK---ILYQMSPQEDSTLAAMLLRPGPILALRS-ARFEEETGDIDKVPRVYIKTLHDHV 224 (273)
T ss_pred eeccCC-CCCCceeeeCHHHHHH---HHhcCCCHHHHHHHHHhcCCcCcccccc-ccccccccccCccceEEEEeCCCCC
Confidence 000000 0000000000010000 00000010000000 01111 1122223345 78999999999999
Q ss_pred c--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 257 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+ +..+.+.+.++. .+++.++ +||.+++++|+++++.|.++....
T Consensus 225 ip~~~~~~m~~~~~~--~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 225 VKPEQQEAMIKRWPP--SQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred CCHHHHHHHHHhCCc--cEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 8 456668888887 7899996 999999999999999999987654
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=213.03 Aligned_cols=249 Identities=17% Similarity=0.265 Sum_probs=153.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
++++||++|||+.+... |+..+ ..+.+ |++|+++|++|+|.+.. .+....|+..++++.+..++...+.
T Consensus 57 ~~~pvlllHGF~~~~~~------w~~~~-~~L~~~~~~~v~aiDl~G~g~~s~--~~~~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFS------WRRVV-PLLSKAKGLRVLAIDLPGHGYSSP--LPRGPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCcEEEeccccCCccc------Hhhhc-cccccccceEEEEEecCCCCcCCC--CCCCCceehhHHHHHHHHHHHhhcC
Confidence 68999999999997755 43333 33443 49999999999994432 1233459999999999999999999
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeE---EecCCCCCCChhHHhhhhhhhHHHHhcCcch-----hHHHHHHHhhc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLI---LVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG-----VVKELLLKRYF 190 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 190 (349)
++++++|||+||.+|+.+|+.+|+.|++++ ++++........................... ...........
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 207 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLL 207 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhh
Confidence 999999999999999999999999999999 5555554332221111111111110000000 00000000000
Q ss_pred ccccccCCCCCCchHHHHHHHHhhhhccchhHHH-----HHHHhcC-CCChhhhccccC-CceEEEEeCCCccc--hhHH
Q 018916 191 SKQEVRGNAQVPESDIVQACRRLLDERQSSNVWH-----FLEAING-RPDISEGLRKLQ-CRSLIFVGESSPFH--SEAV 261 (349)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~l~~i~-~Pvlii~g~~D~~~--~~~~ 261 (349)
....... .......+.....+.........+ ....... .......+.++. ||+|+++|++|+++ +.++
T Consensus 208 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 208 RCLKVVY---TDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAE 284 (326)
T ss_pred cceeeec---cccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHH
Confidence 0000000 001111111111111000000000 0000000 012233456666 99999999999999 5677
Q ss_pred HHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 262 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+.+++ +++++++++||.+++|+|+++++.|..|++..
T Consensus 285 ~~~~~~pn--~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 285 ELKKKLPN--AELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHhhCCC--ceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 78888876 99999999999999999999999999999875
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=211.07 Aligned_cols=265 Identities=15% Similarity=0.156 Sum_probs=155.0
Q ss_pred eEEEEE-ccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC-CCCHHHHHHH
Q 018916 31 SLSVTI-YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP-VLSVDDLADQ 108 (349)
Q Consensus 31 ~l~~~~-~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~-~~~~~~~~~~ 108 (349)
.+.+.. .+++++|+|||+||++.+... |...+ ..+.++|+|+++|+||||.|+.+...... ....+.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~------~~~~~-~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 165 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGF------FFRNF-DALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDS 165 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhH------HHHHH-HHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHH
Confidence 444333 344577999999999887644 32333 44566799999999999998743211000 1112346677
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHH---hhh------hhhhHHHHhcCc--
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYN------KVMSNLLYYYGM-- 177 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~------~~~~~~~~~~~~-- 177 (349)
+.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.........+ ... ...........+
T Consensus 166 i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 245 (402)
T PLN02894 166 FEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTP 245 (402)
T ss_pred HHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCH
Confidence 888888899999999999999999999999999999999999987643321111 100 000000000000
Q ss_pred -------ch---hHHHHHHHhhcccccccC--CCCCCchHHHHHHHHhhhhccc-hhHHHHHHHh--cCCCChhhhcccc
Q 018916 178 -------CG---VVKELLLKRYFSKQEVRG--NAQVPESDIVQACRRLLDERQS-SNVWHFLEAI--NGRPDISEGLRKL 242 (349)
Q Consensus 178 -------~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~i 242 (349)
.. ..........+.. .... ..........+.+......... .......... ....+..+.+.++
T Consensus 246 ~~~~~~~gp~~~~l~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 324 (402)
T PLN02894 246 QKIIRGLGPWGPNLVRRYTTARFGA-HSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEW 324 (402)
T ss_pred HHHHHhccchhHHHHHHHHHHHhhh-cccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccC
Confidence 00 0000111111111 0000 0000011111111111111111 1111111111 1123455668889
Q ss_pred CCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 243 QCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
++|+++|+|++|.+. .....+.+.+. ..+++++++++||+++.|+|++|++.|.+|++.+.
T Consensus 325 ~vP~liI~G~~D~i~~~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 325 KVPTTFIYGRHDWMNYEGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred CCCEEEEEeCCCCCCcHHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 999999999999877 44445555553 23889999999999999999999999999998763
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=210.54 Aligned_cols=256 Identities=16% Similarity=0.183 Sum_probs=165.1
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+...+..++..++|...|++++++|||+||++++... |... ...+.++|+|+++|+||||.|... ....
T Consensus 110 ~~~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~------~~~~-~~~l~~~~~v~~~d~~g~G~s~~~----~~~~ 178 (371)
T PRK14875 110 APRKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNN------WLFN-HAALAAGRPVIALDLPGHGASSKA----VGAG 178 (371)
T ss_pred CCCcceEcCcEEEEecccCCCCCeEEEECCCCCccch------HHHH-HHHHhcCCEEEEEcCCCCCCCCCC----CCCC
Confidence 3345666778899998887778999999999888755 3223 345566799999999999988532 2347
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++++++++.++++.++..+++++|||+||.+++.+|.++|+++.+++++++............ .. +........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~-~~----~~~~~~~~~ 253 (371)
T PRK14875 179 SLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYI-DG----FVAAESRRE 253 (371)
T ss_pred CHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHH-HH----hhcccchhH
Confidence 8999999999999999999999999999999999999999999999999988654321111000 00 000000000
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHh----cCCCChhhhccccCCceEEEEeCCCc
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAI----NGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.. ......+.. .. .................. ...+....... ....+....+.++++|+++++|++|.
T Consensus 254 ~~-~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 326 (371)
T PRK14875 254 LK-PVLELLFAD-PA-----LVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDR 326 (371)
T ss_pred HH-HHHHHHhcC-hh-----hCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCC
Confidence 10 111111111 00 001122222111111000 01111111111 11133445677899999999999999
Q ss_pred cchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 256 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+++.. ..+.+.. +.++..++++||++++++|+++++.|.+||++
T Consensus 327 ~vp~~--~~~~l~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 327 IIPAA--HAQGLPD-GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred ccCHH--HHhhccC-CCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 88321 1222332 48899999999999999999999999999975
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-27 Score=202.16 Aligned_cols=256 Identities=13% Similarity=0.089 Sum_probs=156.8
Q ss_pred eEEeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 23 ~~i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
.++.. ++.+++|...|++++++|||+||+++++..+ .....+..++|+|+++|+||||.|..+. ....++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-------~~~~~~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~ 77 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-------GCRRFFDPETYRIVLFDQRGCGKSTPHA--CLEENT 77 (306)
T ss_pred CeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-------HHHhccCccCCEEEEECCCCCCCCCCCC--CcccCC
Confidence 45555 5678999999977788999999987665321 1111233468999999999999987432 123468
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh--------hhhhhHHHH
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY--------NKVMSNLLY 173 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--------~~~~~~~~~ 173 (349)
++++++++..++++++.++++++||||||.+++.++.++|++|+++|++++....+....+.. ...+.....
T Consensus 78 ~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (306)
T TIGR01249 78 TWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMD 157 (306)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhh
Confidence 899999999999999999999999999999999999999999999999998765432111110 000000000
Q ss_pred hc--Ccc-hhHHHHHHHhhcccccccCCCCCCchHHHHHHHH--------hhhhccch--------hHHHHHHHh-----
Q 018916 174 YY--GMC-GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRR--------LLDERQSS--------NVWHFLEAI----- 229 (349)
Q Consensus 174 ~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--------~~~~~~~~~----- 229 (349)
.. ... ....+.+...++.. .++....+.+ .+...... .....+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (306)
T TIGR01249 158 SIPENERNEQLVNAYHDRLQSG----------DEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYF 227 (306)
T ss_pred hCChhhhhccHHHHHHHHccCC----------CHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHH
Confidence 00 000 01111122222221 1111111110 01100000 001111110
Q ss_pred --cC----CCChhhhcccc-CCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 230 --NG----RPDISEGLRKL-QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 230 --~~----~~~~~~~l~~i-~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
.. ..+....+.++ ++|+++|+|++|.++ ..++.+.+.+++ .++++++++||.++. ++..+.|.+|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~~---~~~~~~i~~~~ 302 (306)
T TIGR01249 228 VNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE--AELKVTNNAGHSAFD---PNNLAALVHAL 302 (306)
T ss_pred HHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCCCCC---hHHHHHHHHHH
Confidence 01 11233456677 699999999999998 567778888887 899999999999863 23445555555
Q ss_pred hh
Q 018916 301 MG 302 (349)
Q Consensus 301 ~~ 302 (349)
+.
T Consensus 303 ~~ 304 (306)
T TIGR01249 303 ET 304 (306)
T ss_pred HH
Confidence 43
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-27 Score=237.38 Aligned_cols=263 Identities=19% Similarity=0.260 Sum_probs=169.4
Q ss_pred EEEEEccC-CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC----CCCCCCCHHHHH
Q 018916 32 LSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS----DDEPVLSVDDLA 106 (349)
Q Consensus 32 l~~~~~g~-~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~----~~~~~~~~~~~~ 106 (349)
++|...|+ +.+++|||+||++++... |... ...+.++|+|+++|+||||.|..... .....+++++++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~------w~~~-~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a 1432 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGED------WIPI-MKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVA 1432 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHH
Confidence 44555564 356899999999999866 3333 34556789999999999999864211 012357899999
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHH
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
+++.+++++++.++++|+||||||.+++.++.++|++|+++|++++..................... ..+.......+.
T Consensus 1433 ~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~-~~l~~~g~~~~~ 1511 (1655)
T PLN02980 1433 DLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRA-RMLIDHGLEIFL 1511 (1655)
T ss_pred HHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHH-HHHHhhhHHHHH
Confidence 9999999999999999999999999999999999999999999987654322111110000000000 000000001122
Q ss_pred HhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc--CCCChhhhccccCCceEEEEeCCCccc-hhHHHH
Q 018916 187 KRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHM 263 (349)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~ 263 (349)
..++.. .+... ....+...+.+...+...........+..+. ...+..+.+.++++|+|+|+|++|.++ ....++
T Consensus 1512 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~ 1589 (1655)
T PLN02980 1512 ENWYSG-ELWKS-LRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKM 1589 (1655)
T ss_pred HHhccH-HHhhh-hccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHH
Confidence 233332 11000 0012222222222222222222222222221 224556778999999999999999987 445667
Q ss_pred HHHhccc----------ceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 264 TSKIDRR----------YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 264 ~~~~~~~----------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+.+++. .+++++++++||++++|+|+++++.|.+||++..
T Consensus 1590 ~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1590 YREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 7777652 2589999999999999999999999999999863
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-27 Score=207.78 Aligned_cols=254 Identities=13% Similarity=0.129 Sum_probs=156.5
Q ss_pred CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHH
Q 018916 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (349)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 104 (349)
++..+++..+.+. .+++|||+||++.+... |...+..+.++||+|+++|+||||.|+.. .....+++.
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~------~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~---~~~~~~~~~ 189 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGR------YLHFAKQLTSCGFGVYAMDWIGHGGSDGL---HGYVPSLDY 189 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHH------HHHHHHHHHHCCCEEEEeCCCCCCCCCCC---CCCCcCHHH
Confidence 5567888877653 34689999999876543 33344556678999999999999998742 122357888
Q ss_pred HHHHHHHHHHHcCC----CcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 105 LADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 105 ~~~~l~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
+++|+.++++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|........... ........
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~--~~~~~l~~---- 262 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV--GAVAPIFS---- 262 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH--HHHHHHHH----
Confidence 99999998887653 37999999999999997764 554 799999999876543211111 00000000
Q ss_pred chhHHHHHHHhh-cccccccCCCCCCchHH-HHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 178 CGVVKELLLKRY-FSKQEVRGNAQVPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 178 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.....+ +............++.. ...+...+..............+.........+.++++|+|+++|++|.
T Consensus 263 ------~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~ 336 (395)
T PLN02652 263 ------LVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADR 336 (395)
T ss_pred ------HhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCC
Confidence 000000 00000000000001111 1111110000000000000011101012345677899999999999999
Q ss_pred cc--hhHHHHHHHhcccceeEEEEcCCCCccccc-ChhhHHHHHHHHHhhc
Q 018916 256 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 303 (349)
++ +.++++.+.+.+.+.+++++++++|.++.| +++++.+.|.+||+..
T Consensus 337 vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 337 VTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred CCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 99 567778888776568899999999999876 7999999999999875
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=197.42 Aligned_cols=270 Identities=14% Similarity=0.095 Sum_probs=173.9
Q ss_pred ceeEEeCCCeeEEEEEccCCCC--CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDK--PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~--p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+..+..+++..++|..+-.... .+||++||++.+..-| ...+..+..+||.|+++|+||||.|.. .....
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry------~~la~~l~~~G~~V~~~D~RGhG~S~r--~~rg~ 82 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRY------EELADDLAARGFDVYALDLRGHGRSPR--GQRGH 82 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHH------HHHHHHHHhCCCEEEEecCCCCCCCCC--CCcCC
Confidence 4556667888999988775433 6999999998887653 245567889999999999999999963 12233
Q ss_pred CCCHHHHHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHh
Q 018916 99 VLSVDDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (349)
..+++++.+|+.++++... ..+++++||||||.|++.++.+++..|+++||.+|....... ... ...... ..
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~-~~~--~~~~~~-~~ 158 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGA-ILR--LILARL-AL 158 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChh-HHH--HHHHHH-hc
Confidence 4569999999999997764 368999999999999999999999999999999999987640 000 000000 00
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhh-hccchhHHHHHHHhcCC-CChhhhccccCCceEEEEeC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLD-ERQSSNVWHFLEAINGR-PDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~ 252 (349)
.................. .........+++..+.+.+.-. .............+... .........+++|+|+++|+
T Consensus 159 ~~~~~~~p~~~~~~~~~~-~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~ 237 (298)
T COG2267 159 KLLGRIRPKLPVDSNLLE-GVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGG 237 (298)
T ss_pred ccccccccccccCccccc-CcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecC
Confidence 011100000000000000 1111111114444444443221 11111222211111111 12344567789999999999
Q ss_pred CCccch---hHHHHHHHhcccceeEEEEcCCCCcccccC-h--hhHHHHHHHHHhhc
Q 018916 253 SSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQ-P--HAMLIPMEYFLMGY 303 (349)
Q Consensus 253 ~D~~~~---~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-p--~~~~~~i~~fl~~~ 303 (349)
+|.++. ...++.+....+++++++++|+.|.++.|. . +++.+.+.+|+.+.
T Consensus 238 ~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 238 DDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred CCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 999984 234466666666689999999999988864 4 68889999999875
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-25 Score=195.25 Aligned_cols=272 Identities=13% Similarity=0.150 Sum_probs=170.7
Q ss_pred eeEEEEEccCC---CCCeEEEecCCCCChhhh-------hcccccchhhhh---hhcCCeEEEEECCCCCCCCCCC----
Q 018916 30 GSLSVTIYGDQ---DKPALVTYPDLALNYMSC-------FQGLFFCPEACS---LLLHNFCIYHINPPGHEFGAAA---- 92 (349)
Q Consensus 30 ~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~-------~~~~~~~~~~~~---~l~~g~~vi~~D~~G~G~s~~~---- 92 (349)
.++.|+.+|.. ..++||++|++++++... ...-+|...+-. +=...|.||++|..|-|.|.+|
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 47899999963 357999999998864221 011234222221 2245899999999998754322
Q ss_pred ---C---C-------CCCCCCCHHHHHHHHHHHHHHcCCCcEE-EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC
Q 018916 93 ---I---S-------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (349)
Q Consensus 93 ---~---~-------~~~~~~~~~~~~~~l~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (349)
. + .+...++++++++++..+++++++++++ ++||||||++|+.+|.++|++|+++|++++......
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~ 200 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDA 200 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCCh
Confidence 0 1 1234589999999999999999999986 999999999999999999999999999998876544
Q ss_pred hh-HHhhhhhhhHHHHhc------Cc-----c----hhHHHHHHHhhcccc----cccCCC-CCCc-------hHHHHHH
Q 018916 159 WT-EWLYNKVMSNLLYYY------GM-----C----GVVKELLLKRYFSKQ----EVRGNA-QVPE-------SDIVQAC 210 (349)
Q Consensus 159 ~~-~~~~~~~~~~~~~~~------~~-----~----~~~~~~~~~~~~~~~----~~~~~~-~~~~-------~~~~~~~ 210 (349)
+. .... ......+... .. . ..........++... .+.... .... ....+.+
T Consensus 201 ~~~~~~~-~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~y 279 (389)
T PRK06765 201 WTSVNVL-QNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKE 279 (389)
T ss_pred hHHHHHH-HHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHH
Confidence 32 1111 1111111000 00 0 000000111111110 110000 0000 0011222
Q ss_pred HHh-----hhhccchhHHHHHHHhcCC------CChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc--cceeEE
Q 018916 211 RRL-----LDERQSSNVWHFLEAINGR------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR--RYSALV 275 (349)
Q Consensus 211 ~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~--~~~~~~ 275 (349)
... ....+...+....+.+... .+..+.+.++++|+|+|+|++|.++ ...+++.+.+++ .+++++
T Consensus 280 l~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~ 359 (389)
T PRK06765 280 INKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVY 359 (389)
T ss_pred HHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEE
Confidence 211 1222334444444444321 2567788899999999999999988 456678888863 248999
Q ss_pred EEcC-CCCcccccChhhHHHHHHHHHhh
Q 018916 276 EVQA-CGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 276 ~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++++ +||+.++++|+++++.|.+||++
T Consensus 360 ~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 360 EIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9985 99999999999999999999975
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=214.69 Aligned_cols=265 Identities=14% Similarity=0.126 Sum_probs=156.4
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+..++..++.+++|..+|++++|+|||+||++++... |... ...+.++|+|+++|+||||.|..+. ....+
T Consensus 4 ~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~------w~~~-~~~L~~~~~Vi~~D~~G~G~S~~~~--~~~~~ 74 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEV------WDGV-APLLADRFRVVAYDVRGAGRSSAPK--RTAAY 74 (582)
T ss_pred eEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHH------HHHH-HHHhhcceEEEEecCCCCCCCCCCC--ccccc
Confidence 4566777899999999998788999999999888755 4333 3555889999999999999987432 22358
Q ss_pred CHHHHHHHHHHHHHHcCCCc-EEEEEechhHHHHHHHHHh--hhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 101 SVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
+++++++|+.+++++++..+ ++|+||||||.+++.++.+ .++++..++.+++.... ....+..... .. ......
T Consensus 75 ~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~-~~-~~~~~~ 151 (582)
T PRK05855 75 TLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD-HVGFWLRSGL-RR-PTPRRL 151 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH-HHHHHHhhcc-cc-cchhhh
Confidence 99999999999999998765 9999999999999988776 34455555554432211 0000000000 00 000000
Q ss_pred chhHHHHHHHh----hccccc---ccCCCCCCchHHHHHHHHhhhhcc-------------chhHHHHHHHhcCCCChhh
Q 018916 178 CGVVKELLLKR----YFSKQE---VRGNAQVPESDIVQACRRLLDERQ-------------SSNVWHFLEAINGRPDISE 237 (349)
Q Consensus 178 ~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~ 237 (349)
...... .... .+.... .... ...... ............ ............. .....
T Consensus 152 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 227 (582)
T PRK05855 152 ARALGQ-LLRSWYIYLFHLPVLPELLWR-LGLGRA-WPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIR-SLSRP 227 (582)
T ss_pred hHHHHH-HhhhHHHHHHhCCCCcHHHhc-cchhhH-HHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhh-hhccC
Confidence 000000 0000 000000 0000 000000 000000000000 0001111010100 11112
Q ss_pred hccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 238 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 238 ~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+..+++|+++|+|++|.++ ...+.+.+.+++ .++++++ +||+++.|+|+++++.|.+|+.+..
T Consensus 228 ~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 228 RERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPR--LWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCCccCceEEEEeCCCcccCHHHhccccccCCc--ceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 24568999999999999998 344456666665 7777775 7999999999999999999999865
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-26 Score=183.22 Aligned_cols=264 Identities=15% Similarity=0.112 Sum_probs=175.9
Q ss_pred ceeEEeC-CCeeEEEEEccCC----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
...++++ .|.++.+..+-+. .+..|+|+||++.+....++ .....+...||.|+++|++|||.|+. .
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~-----~~a~~l~~~g~~v~a~D~~GhG~SdG---l 99 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQ-----STAKRLAKSGFAVYAIDYEGHGRSDG---L 99 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHH-----HHHHHHHhCCCeEEEeeccCCCcCCC---C
Confidence 3344444 6668888777652 34489999999988644333 34467788999999999999999983 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH--Hhhhhh
Q 018916 96 DEPVLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE--WLYNKV 167 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~ 167 (349)
.....+++..++|+..+.+... ..+..++||||||.|++.++.+.|+..+|+|+++|......... +.. ..
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v-~~ 178 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPV-IS 178 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHH-HH
Confidence 3455789999999988887532 24789999999999999999999999999999999886532111 110 00
Q ss_pred hhHHHHhcCcchhHHHHHHHhhc-ccccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHHHhcCCCChhhhccccCCc
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYF-SKQEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCR 245 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 245 (349)
+...+. .+...|- .+..-.......+++..+.+...-.. .....+....+.++...++...+.++++|
T Consensus 179 ~l~~l~----------~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP 248 (313)
T KOG1455|consen 179 ILTLLS----------KLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP 248 (313)
T ss_pred HHHHHH----------HhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccccccc
Confidence 011100 0111111 00000000001133333333332211 12223334444444445677889999999
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccc----cChhhHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTE----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~ 303 (349)
.+++||+.|.++ ..++++.+.....+.++..+||+-|.++. |+-+.|...|.+||++.
T Consensus 249 flilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 249 FLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999 57778999998888999999999998886 34456788899999863
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-26 Score=171.17 Aligned_cols=252 Identities=13% Similarity=0.137 Sum_probs=170.0
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCC-eEEEEECCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g-~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
++..+.++|.+++|..+|. +...|++++|.-+++... |.+++..+...- +.|+++|.||+|.|.+|.. ....
T Consensus 22 te~kv~vng~ql~y~~~G~-G~~~iLlipGalGs~~tD-----f~pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf~~ 94 (277)
T KOG2984|consen 22 TESKVHVNGTQLGYCKYGH-GPNYILLIPGALGSYKTD-----FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KFEV 94 (277)
T ss_pred hhheeeecCceeeeeecCC-CCceeEeccccccccccc-----CCHHHHhcCCCCceEEEEECCCCCCCCCCCcc-cchH
Confidence 5667788999999999992 334788999987776552 445556666554 9999999999999986532 1222
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
.-+..-+++..+++++|..+++.++|||-||..|+..|+++++.|.++|+++............. +.+.... .+..
T Consensus 95 ~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~-kgiRdv~---kWs~ 170 (277)
T KOG2984|consen 95 QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAF-KGIRDVN---KWSA 170 (277)
T ss_pred HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHH-hchHHHh---hhhh
Confidence 33455577778899999999999999999999999999999999999999998776543222111 1111110 0000
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 257 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-- 257 (349)
..++ -....++. +.+...+.++.. .. .++..+..-.-.+..+.+++||+||++|++|+++
T Consensus 171 r~R~-P~e~~Yg~-----------e~f~~~wa~wvD-----~v-~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~ 232 (277)
T KOG2984|consen 171 RGRQ-PYEDHYGP-----------ETFRTQWAAWVD-----VV-DQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGD 232 (277)
T ss_pred hhcc-hHHHhcCH-----------HHHHHHHHHHHH-----HH-HHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCC
Confidence 0001 11122222 111111111111 11 1111111111133557899999999999999999
Q ss_pred hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 258 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+..-.+....+. +++.+.++++|.+++..+++|++.+.+||++.
T Consensus 233 ~hv~fi~~~~~~--a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 233 PHVCFIPVLKSL--AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCccchhhhccc--ceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 455556666676 99999999999999999999999999999863
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=197.38 Aligned_cols=270 Identities=13% Similarity=0.122 Sum_probs=151.9
Q ss_pred CCceeEEeC-CCeeEEEEEc------cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC
Q 018916 19 SGKDNLIKT-SHGSLSVTIY------GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 19 ~~~~~~i~~-~~~~l~~~~~------g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
..++..+.+ +|+.+.+.-. .+.++|+|||+||+++++... ++...+..++++||+|+++|+||||.|..
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~----y~~~~~~~~~~~g~~vv~~d~rG~G~s~~ 145 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDS----YVRHMLLRARSKGWRVVVFNSRGCADSPV 145 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCH----HHHHHHHHHHHCCCEEEEEecCCCCCCCC
Confidence 345566666 5566654321 235678999999997765331 11123346678999999999999998864
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCC----CcEEEEEechhHHHHHHHHHhhhcc--cceeEEecCCCCCCChhHHhhh
Q 018916 92 AISDDEPVLSVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYN 165 (349)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~ 165 (349)
..+ ......+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++...........
T Consensus 146 ~~~----~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~- 220 (388)
T PLN02511 146 TTP----QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFH- 220 (388)
T ss_pred CCc----CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHh-
Confidence 211 12224455666666655543 6899999999999999999999987 888888876654211110000
Q ss_pred hhhhHHHHhcCcchhHHHHHH--Hhhccc-ccccCCCCCCchHHHHHHHHhhhh--ccchhHHHHHHHhcCCCChhhhcc
Q 018916 166 KVMSNLLYYYGMCGVVKELLL--KRYFSK-QEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAINGRPDISEGLR 240 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 240 (349)
..+. ......+......... ...+.. .................+.+.+.. ........++ ...+..+.+.
T Consensus 221 ~~~~-~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy----~~~s~~~~L~ 295 (388)
T PLN02511 221 KGFN-NVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYY----SNSSSSDSIK 295 (388)
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHH----HHcCchhhhc
Confidence 0000 0000000000000000 000000 000000000000000001010100 0000111111 1133456788
Q ss_pred ccCCceEEEEeCCCccch-h-H-HHHHHHhcccceeEEEEcCCCCcccccChhh------HHHHHHHHHhhcc
Q 018916 241 KLQCRSLIFVGESSPFHS-E-A-VHMTSKIDRRYSALVEVQACGSMVTEEQPHA------MLIPMEYFLMGYG 304 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~~-~-~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~~~ 304 (349)
+|++|+|+|+|++|++++ . . ..+.+.+++ +++++++++||+.++|+|+. +.+.+.+||+.+.
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~--~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPREDIKANPN--CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC--EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 999999999999999982 2 2 345566666 99999999999999999986 4899999998764
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=167.28 Aligned_cols=224 Identities=13% Similarity=0.184 Sum_probs=155.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHcC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL---NHFG 117 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l---~~l~ 117 (349)
++..|+||||+.++... ...+...+.++||.|+++.+||||... ......+.+++-+++.+.- ...+
T Consensus 14 G~~AVLllHGFTGt~~D------vr~Lgr~L~e~GyTv~aP~ypGHG~~~----e~fl~t~~~DW~~~v~d~Y~~L~~~g 83 (243)
T COG1647 14 GNRAVLLLHGFTGTPRD------VRMLGRYLNENGYTVYAPRYPGHGTLP----EDFLKTTPRDWWEDVEDGYRDLKEAG 83 (243)
T ss_pred CCEEEEEEeccCCCcHH------HHHHHHHHHHCCceEecCCCCCCCCCH----HHHhcCCHHHHHHHHHHHHHHHHHcC
Confidence 44789999999888754 223345666789999999999998754 3344577788877666544 4457
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccC
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
.+.|.++|.||||.+++.+|..+| ++++|.++++.....+..... .+.... . -.+.+-..
T Consensus 84 y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie--~~l~y~---------~--~~kk~e~k----- 143 (243)
T COG1647 84 YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIE--GLLEYF---------R--NAKKYEGK----- 143 (243)
T ss_pred CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhH--HHHHHH---------H--HhhhccCC-----
Confidence 899999999999999999999998 999999999887654432210 000000 0 01111111
Q ss_pred CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEE
Q 018916 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV 275 (349)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~ 275 (349)
+.+..+.....+..........+...+ .+....+..|..|++++.|.+|+++ +.+..+.+.+.....++.
T Consensus 144 -----~~e~~~~e~~~~~~~~~~~~~~~~~~i---~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~ 215 (243)
T COG1647 144 -----DQEQIDKEMKSYKDTPMTTTAQLKKLI---KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELK 215 (243)
T ss_pred -----CHHHHHHHHHHhhcchHHHHHHHHHHH---HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeE
Confidence 334444433333322222222222222 2355668889999999999999999 667778888887779999
Q ss_pred EEcCCCCcccc-cChhhHHHHHHHHHhh
Q 018916 276 EVQACGSMVTE-EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 276 ~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 302 (349)
+++++||.+.. +..+.+.+.+..||+.
T Consensus 216 ~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 216 WLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred EEccCCceeecchhHHHHHHHHHHHhhC
Confidence 99999998887 5678899999999973
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=172.14 Aligned_cols=241 Identities=15% Similarity=0.138 Sum_probs=157.3
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG- 117 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~- 117 (349)
...|+++++||+-+++.. |......+... +..|+++|.|.||.|... ..++.+++++|+..|++..+
T Consensus 50 ~~~Pp~i~lHGl~GS~~N------w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ma~dv~~Fi~~v~~ 118 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN------WRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEAMAEDVKLFIDGVGG 118 (315)
T ss_pred CCCCceEEecccccCCCC------HHHHHHHhcccccCceEEEecccCCCCccc-----cccCHHHHHHHHHHHHHHccc
Confidence 478999999999999866 54443444332 779999999999988642 24679999999999998874
Q ss_pred ---CCcEEEEEechhH-HHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc---hhHHHHHHHhhc
Q 018916 118 ---LGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC---GVVKELLLKRYF 190 (349)
Q Consensus 118 ---~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 190 (349)
..+++++|||||| .+++..+...|+.+..+|+++..+..-..........+.. +...... ..........+.
T Consensus 119 ~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~-m~~~d~~~~~~~~rke~~~~l~ 197 (315)
T KOG2382|consen 119 STRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKA-MIQLDLSIGVSRGRKEALKSLI 197 (315)
T ss_pred ccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHH-HHhccccccccccHHHHHHHHH
Confidence 6789999999999 7777888899999999999997764211111011011111 1111110 000111111111
Q ss_pred ccccccCCCCCCchHHHHHHHHhhhh----------ccchhHHHHHHH--hcCCCChhhhccccCCceEEEEeCCCccc-
Q 018916 191 SKQEVRGNAQVPESDIVQACRRLLDE----------RQSSNVWHFLEA--INGRPDISEGLRKLQCRSLIFVGESSPFH- 257 (349)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~l~~i~~Pvlii~g~~D~~~- 257 (349)
.. . .+....+.+...+.. .+.......+.. ...++...+. .....||+++.|.++.++
T Consensus 198 ~~-~-------~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 198 EV-G-------FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HH-h-------cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcC
Confidence 11 1 123333444444431 112223333333 2222222223 667899999999999999
Q ss_pred -hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 258 -SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 258 -~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+....+.+.+++ ++++.++++||++|.|+|+++.+.|.+|+++.
T Consensus 269 ~~~~~~~~~~fp~--~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 269 DEHYPRMEKIFPN--VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred hhHHHHHHHhccc--hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 445567888888 99999999999999999999999999999754
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=183.26 Aligned_cols=259 Identities=10% Similarity=0.062 Sum_probs=153.2
Q ss_pred CCCeeEEEEEccCC-CCCeEEEecCCCCChhhhhcc-----------------cc---cchhhhhhhcCCeEEEEECCCC
Q 018916 27 TSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQG-----------------LF---FCPEACSLLLHNFCIYHINPPG 85 (349)
Q Consensus 27 ~~~~~l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~-----------------~~---~~~~~~~~l~~g~~vi~~D~~G 85 (349)
.+|..|+++.+.++ .+.+||++||++.+....+.. .+ ....+..+.++||+|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 36667888776543 456999999999887522211 00 0123456668899999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC------------------------CCcEEEEEechhHHHHHHHHHhhh
Q 018916 86 HEFGAAAISDDEPVLSVDDLADQIAEVLNHFG------------------------LGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 86 ~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~------------------------~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
||.|...........+++++++|+..+++... ..+++++||||||.+++.++.+++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 99987432111222489999999999887531 247999999999999999987664
Q ss_pred c--------ccceeEEecCCCCCCChh-----H-HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHH
Q 018916 142 H--------RVLGLILVSPLCKAPSWT-----E-WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIV 207 (349)
Q Consensus 142 ~--------~v~~lvl~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (349)
+ .++++|+++|........ . ......+...+.. +...+.-. . ......++...
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~----------~~p~~~~~-~--~~~~~~~~~~~ 231 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSR----------VFPTFRIS-K--KIRYEKSPYVN 231 (332)
T ss_pred cccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHH----------HCCccccc-C--ccccccChhhh
Confidence 3 589999888875321100 0 0000111111100 00000000 0 00000012222
Q ss_pred HHHHHhhhhc----cchhHHHHHHHhcCCCChhhhcccc--CCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcC
Q 018916 208 QACRRLLDER----QSSNVWHFLEAINGRPDISEGLRKL--QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA 279 (349)
Q Consensus 208 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~ 279 (349)
+.+...-... ........+.... .....+.++ ++|+|+++|++|.++ +.++.+.+.+...+.+++++++
T Consensus 232 ~~~~~Dp~~~~~~~s~~~~~~l~~~~~---~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g 308 (332)
T TIGR01607 232 DIIKFDKFRYDGGITFNLASELIKATD---TLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLED 308 (332)
T ss_pred hHHhcCccccCCcccHHHHHHHHHHHH---HHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECC
Confidence 2221111000 1111111122111 112234444 799999999999998 5566677776555589999999
Q ss_pred CCCcccccC-hhhHHHHHHHHHh
Q 018916 280 CGSMVTEEQ-PHAMLIPMEYFLM 301 (349)
Q Consensus 280 ~gH~~~~e~-p~~~~~~i~~fl~ 301 (349)
++|.++.|. ++++.+.|.+||+
T Consensus 309 ~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCccCCCHHHHHHHHHHHhh
Confidence 999999975 6889999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-23 Score=178.96 Aligned_cols=268 Identities=11% Similarity=0.039 Sum_probs=148.8
Q ss_pred CCceeEEeC-CCeeEEEEEc--c--CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 19 SGKDNLIKT-SHGSLSVTIY--G--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 19 ~~~~~~i~~-~~~~l~~~~~--g--~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
..+...+.+ +|+.+.+... . +..+|+||++||++++....+ ....+..+.++||+|+++|+||||.+....
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~----~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~ 105 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPY----AHGLLEAAQKRGWLGVVMHFRGCSGEPNRL 105 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHH----HHHHHHHHHHCCCEEEEEeCCCCCCCccCC
Confidence 344555666 4445444322 1 135689999999987643311 123445677889999999999998664221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcc--cceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
.........+|+...+..+.+.++..+++++||||||.+++.++.++++. +.++++++++........... ......
T Consensus 106 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~-~~~~~~ 184 (324)
T PRK10985 106 HRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRME-QGFSRV 184 (324)
T ss_pred cceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHh-hhHHHH
Confidence 11111224566555555555667778999999999999999888887654 889999998765321111110 000000
Q ss_pred HHhcCcchhHHH---HHHHhhcccccccCCCCCCchHHHHH------HHHhhhhccchhHHHHHHHhcCCCChhhhcccc
Q 018916 172 LYYYGMCGVVKE---LLLKRYFSKQEVRGNAQVPESDIVQA------CRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 242 (349)
Q Consensus 172 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (349)
. ...+.....+ .....+... . ..+.+.... +.+.+. ....++......+.. .+..+.+.++
T Consensus 185 ~-~~~l~~~l~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~fd~~~~-~~~~g~~~~~~~y~~-~~~~~~l~~i 254 (324)
T PRK10985 185 Y-QRYLLNLLKANAARKLAAYPGT--L-----PINLAQLKSVRRLREFDDLIT-ARIHGFADAIDYYRQ-CSALPLLNQI 254 (324)
T ss_pred H-HHHHHHHHHHHHHHHHHhcccc--c-----cCCHHHHhcCCcHHHHhhhhe-eccCCCCCHHHHHHH-CChHHHHhCC
Confidence 0 0000000000 011111111 0 001111111 111110 111111111122212 3345678899
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccCh----h-hHHHHHHHHHhhc
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP----H-AMLIPMEYFLMGY 303 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p----~-~~~~~i~~fl~~~ 303 (349)
++|+++|+|++|+++ +....+.+..++ .++++++++||+.++|.. . -.-+.+.+|++..
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPESLPPN--VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHHhCCC--eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999999999988 333445555555 899999999999999742 2 3456777888654
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-22 Score=170.19 Aligned_cols=251 Identities=14% Similarity=0.131 Sum_probs=144.4
Q ss_pred eEEeCCCeeEEEEEc--cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~--g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
..+..++..+.-... .+..++.||++||+.....+++. .|......+.++||+|+++|+||||.|... ..
T Consensus 5 ~~~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~--~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~------~~ 76 (274)
T TIGR03100 5 LTFSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHR--QFVLLARRLAEAGFPVLRFDYRGMGDSEGE------NL 76 (274)
T ss_pred EEEEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchh--HHHHHHHHHHHCCCEEEEeCCCCCCCCCCC------CC
Confidence 445556665543332 22345678888876543322111 122344556678999999999999987621 24
Q ss_pred CHHHHHHHHHHHHHHc-----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh-hhhhhhHHHHh
Q 018916 101 SVDDLADQIAEVLNHF-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL-YNKVMSNLLYY 174 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~ 174 (349)
+++++.+|+.++++.+ +.++++++||||||.+++.+|.. +.+|+++|+++|........... .........
T Consensus 77 ~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~-- 153 (274)
T TIGR03100 77 GFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQL-- 153 (274)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHH--
Confidence 6677777777777665 56789999999999999988765 46899999999875532211110 000000000
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc---cchhHHHHHHHhcCCCChhhhccccCCceEEEEe
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER---QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 251 (349)
... .....++.. .+ ........+...+... ........ ...+....+.++++|+++++|
T Consensus 154 --~~~----~~~~~~~~g-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~P~ll~~g 215 (274)
T TIGR03100 154 --LSA----DFWRKLLSG-EV------NLGSSLRGLGDALLKARQKGDEVAHGG-----LAERMKAGLERFQGPVLFILS 215 (274)
T ss_pred --hCh----HHHHHhcCC-Cc------cHHHHHHHHHHHHHhhhhcCCCcccch-----HHHHHHHHHHhcCCcEEEEEc
Confidence 000 011111111 10 0111112222111000 00000000 002234456678999999999
Q ss_pred CCCccchhH-------HHHHHHhcccceeEEEEcCCCCccccc-ChhhHHHHHHHHHhh
Q 018916 252 ESSPFHSEA-------VHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYFLMG 302 (349)
Q Consensus 252 ~~D~~~~~~-------~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 302 (349)
++|...+.. ....+.+..++++++.+++++|++..+ .++++.+.|.+||++
T Consensus 216 ~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 216 GNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred CcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999886322 334454643459999999999998564 558999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.2e-23 Score=170.28 Aligned_cols=212 Identities=18% Similarity=0.263 Sum_probs=130.5
Q ss_pred eEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 76 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
|+|+++|+||+|.|++........++.+++++++..++++++.++++++||||||.+++.+|+++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 79999999999998831113345689999999999999999999999999999999999999999999999999999741
Q ss_pred CC------ChhHHhhhhhhhHHHHh--cCcchhHHHHHH--HhhcccccccCCCCCCchHHHHHH-HHhhhhc-cch---
Q 018916 156 AP------SWTEWLYNKVMSNLLYY--YGMCGVVKELLL--KRYFSKQEVRGNAQVPESDIVQAC-RRLLDER-QSS--- 220 (349)
Q Consensus 156 ~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--- 220 (349)
.. ................. ............ ...... .. ..+..... ....... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~ 152 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDR-EF-------VEDFLKQFQSQQYARFAETDAFD 152 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-------HHTHHHHHHHHHHHHTCHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccC-cc-------ccchhhccchhhhhHHHHHHHHh
Confidence 00 00000000000000000 000000000000 000000 00 00000000 0000000 000
Q ss_pred hHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHH
Q 018916 221 NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPME 297 (349)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 297 (349)
.............+....+.++++|+++++|++|.++ .....+.+.+++ .++++++++||+.++++++++++.|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0001001111112344567789999999999999998 556667888888 99999999999999999999999885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-21 Score=172.65 Aligned_cols=237 Identities=14% Similarity=0.100 Sum_probs=145.4
Q ss_pred CCCCceeEEeCCCe-eEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 17 PPSGKDNLIKTSHG-SLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 17 ~~~~~~~~i~~~~~-~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
+...++..+.+.++ .+..+.+.+ +..|+||++||+++.... +|......+..+||+|+++|+||||.|...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~-----~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~ 239 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTD-----YYRLFRDYLAPRGIAMLTIDMPSVGFSSKW 239 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhh-----hHHHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 33456777777666 676555433 345677777776543222 133344567788999999999999988531
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC-ChhHHhhhhhh
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP-SWTEWLYNKVM 168 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~ 168 (349)
........+..++.+++... +.+++.++||||||.+++.+|..+|++++++|++++..... ....+. .
T Consensus 240 ----~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~--~-- 311 (414)
T PRK05077 240 ----KLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQ--Q-- 311 (414)
T ss_pred ----CccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhh--h--
Confidence 11133444555666666544 55789999999999999999999999999999999875321 000000 0
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhc-cccCCceE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL-RKLQCRSL 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl 247 (349)
.+.....+.+.. .+.. . ....+ .+...+ ..+.. .....+ .++++|+|
T Consensus 312 -------~~p~~~~~~la~-~lg~-~------~~~~~---~l~~~l------------~~~sl--~~~~~l~~~i~~PvL 359 (414)
T PRK05077 312 -------QVPEMYLDVLAS-RLGM-H------DASDE---ALRVEL------------NRYSL--KVQGLLGRRCPTPML 359 (414)
T ss_pred -------hchHHHHHHHHH-HhCC-C------CCChH---HHHHHh------------hhccc--hhhhhhccCCCCcEE
Confidence 000000011111 1111 0 00111 111111 11100 000111 46899999
Q ss_pred EEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|+|++|+++ +..+.+.+..++ .++++++++ ++.+.++++++.|.+||++.
T Consensus 360 iI~G~~D~ivP~~~a~~l~~~~~~--~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 360 SGYWKNDPFSPEEDSRLIASSSAD--GKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred EEecCCCCCCCHHHHHHHHHhCCC--CeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999999998 555667777776 899999976 45689999999999999864
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=173.62 Aligned_cols=282 Identities=14% Similarity=0.101 Sum_probs=163.5
Q ss_pred cCCCCCCceeEEeCCC-eeEEEEEcc-------CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC
Q 018916 14 ETPPPSGKDNLIKTSH-GSLSVTIYG-------DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG 85 (349)
Q Consensus 14 ~~~~~~~~~~~i~~~~-~~l~~~~~g-------~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G 85 (349)
....+..+++.+.|++ ..+.+.... +..+|+|||+||++.++..|....--......+.++||+|+++|+||
T Consensus 38 ~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG 117 (395)
T PLN02872 38 HPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRG 117 (395)
T ss_pred HHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccc
Confidence 3445677899999854 456655432 12468999999999888765321100112224557799999999999
Q ss_pred CCCCCC-----CCCCCCCCCCHHHHH-HHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCC
Q 018916 86 HEFGAA-----AISDDEPVLSVDDLA-DQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPL 153 (349)
Q Consensus 86 ~G~s~~-----~~~~~~~~~~~~~~~-~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 153 (349)
+|.|.. +.......+++++++ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +|+.+++++|.
T Consensus 118 ~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 118 TRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred cccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 876532 111112257899998 7999988875 347899999999999999554 5665 68899999988
Q ss_pred CCCCChhHHh----hhhhhhHHHHhcCcchh-----HHHHHH--------------HhhcccccccCCCCCCchHHHHHH
Q 018916 154 CKAPSWTEWL----YNKVMSNLLYYYGMCGV-----VKELLL--------------KRYFSKQEVRGNAQVPESDIVQAC 210 (349)
Q Consensus 154 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (349)
.......... ........+...+...+ ....+. ..+.+. + ...+......+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~-~-----~~~n~~~~~~~ 270 (395)
T PLN02872 197 SYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGT-N-----CCFNASRIDYY 270 (395)
T ss_pred hhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCC-C-----cccchhhhhHH
Confidence 6542211111 00000011111111111 000011 111111 0 00111122222
Q ss_pred HHhhhh-ccchhHHHHHHHh-------------------cCCCChhhhcccc--CCceEEEEeCCCccc--hhHHHHHHH
Q 018916 211 RRLLDE-RQSSNVWHFLEAI-------------------NGRPDISEGLRKL--QCRSLIFVGESSPFH--SEAVHMTSK 266 (349)
Q Consensus 211 ~~~~~~-~~~~~~~~~~~~~-------------------~~~~~~~~~l~~i--~~Pvlii~g~~D~~~--~~~~~~~~~ 266 (349)
...... .....+..+.+.+ .......-.+.++ ++|+++++|++|.++ ...+.+.+.
T Consensus 271 ~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~ 350 (395)
T PLN02872 271 LEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAE 350 (395)
T ss_pred HhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHH
Confidence 221111 1111222222211 1111112236667 589999999999998 566778888
Q ss_pred hcccceeEEEEcCCCCcc---cccChhhHHHHHHHHHhhc
Q 018916 267 IDRRYSALVEVQACGSMV---TEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 267 ~~~~~~~~~~i~~~gH~~---~~e~p~~~~~~i~~fl~~~ 303 (349)
+++ ..+++.+++++|.. ..+.|+++.+.|.+|+++.
T Consensus 351 Lp~-~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 351 LPS-KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CCC-ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 886 25788899999964 4488999999999999864
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-21 Score=168.31 Aligned_cols=248 Identities=12% Similarity=0.113 Sum_probs=146.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH-----HHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD-----QIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~-----~l~~~l~~ 115 (349)
.+++||++||+..++..+... .+...+..+.++||+|+++|++|+|.++. ..++++++. .+..+++.
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~-~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-------~~~~~d~~~~~~~~~v~~l~~~ 132 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQ-EDRSLVRGLLERGQDVYLIDWGYPDRADR-------YLTLDDYINGYIDKCVDYICRT 132 (350)
T ss_pred CCCcEEEeccccccceeccCC-CCchHHHHHHHCCCeEEEEeCCCCCHHHh-------cCCHHHHHHHHHHHHHHHHHHH
Confidence 356799999986554333222 24566777888899999999999987652 246666653 34445566
Q ss_pred cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH----HhhhhhhhHHHHhcC-cchhHHHH------
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE----WLYNKVMSNLLYYYG-MCGVVKEL------ 184 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~------ 184 (349)
.+.++++++||||||.+++.+++.+|++|+++|+++++........ +.............+ +.......
T Consensus 133 ~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~ 212 (350)
T TIGR01836 133 SKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLK 212 (350)
T ss_pred hCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 7788999999999999999999999999999999998876432111 100000001111111 11100000
Q ss_pred ----HHHhhcccccccCCCCCCchHHHHHHHH---hhhhc---cchhHHHHHHHhcCCC----------ChhhhccccCC
Q 018916 185 ----LLKRYFSKQEVRGNAQVPESDIVQACRR---LLDER---QSSNVWHFLEAINGRP----------DISEGLRKLQC 244 (349)
Q Consensus 185 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~----------~~~~~l~~i~~ 244 (349)
....+...... ..+++....+.+ +.... ....+...+..+.... .....+.++++
T Consensus 213 p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~ 287 (350)
T TIGR01836 213 PFSLGYQKYVNLVDI-----LEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKM 287 (350)
T ss_pred cchhhhHHHHHHHHh-----cCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCC
Confidence 00001000000 012222222221 11111 1112222222221101 11234678899
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccC---hhhHHHHHHHHHhh
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQ---PHAMLIPMEYFLMG 302 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 302 (349)
|+++++|++|.++ ..++.+.+.+++.+.+++.++ +||..++.+ ++++.+.|.+||++
T Consensus 288 Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 288 PILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 9999999999998 456678888876557777776 899887754 47899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=155.84 Aligned_cols=278 Identities=14% Similarity=0.196 Sum_probs=157.9
Q ss_pred EeccCCCCC---CceeEEeCCCee--EEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEEC
Q 018916 11 IDMETPPPS---GKDNLIKTSHGS--LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHIN 82 (349)
Q Consensus 11 ~~~~~~~~~---~~~~~i~~~~~~--l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D 82 (349)
.++...++. .+...++.++.. ++.+..++ ..+|.++++||+|.++.+ |.....++..+ ..+|+++|
T Consensus 36 re~S~~pWs~yFdekedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LS------fA~~a~el~s~~~~r~~a~D 109 (343)
T KOG2564|consen 36 REYSPVPWSDYFDEKEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALS------FAIFASELKSKIRCRCLALD 109 (343)
T ss_pred cccCCCchHHhhccccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchh------HHHHHHHHHhhcceeEEEee
Confidence 344444443 355566666554 55555554 478999999999999877 32333344433 67889999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC---CCcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCCCC
Q 018916 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 83 ~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~ 157 (349)
+||||++.. .+..+.+.+.+++|+.++++.+= ..+++||||||||.||...|.. .|. +.+++.++..-...
T Consensus 110 lRgHGeTk~---~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtA 185 (343)
T KOG2564|consen 110 LRGHGETKV---ENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTA 185 (343)
T ss_pred ccccCcccc---CChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHH
Confidence 999999874 44456899999999999997652 3679999999999999887763 465 88999988654321
Q ss_pred ChhHHhhhhhhhHHHHhcC-cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhh------hccchhHHHHHHHhc
Q 018916 158 SWTEWLYNKVMSNLLYYYG-MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLD------ERQSSNVWHFLEAIN 230 (349)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 230 (349)
.... ......++... ....+.+ ...+.......++. ....-.+...+...-. .........++..+.
T Consensus 186 --meAL--~~m~~fL~~rP~~F~Si~~-Ai~W~v~sg~~Rn~-~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF 259 (343)
T KOG2564|consen 186 --MEAL--NSMQHFLRNRPKSFKSIED-AIEWHVRSGQLRNR-DSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWF 259 (343)
T ss_pred --HHHH--HHHHHHHhcCCccccchhh-HHHHHhcccccccc-ccceEecchheeeccCCCcEEEEeeccccchhHHHHH
Confidence 0000 00001110000 0000100 11111111000000 0000000000000000 000001111111111
Q ss_pred CCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhccccccC
Q 018916 231 GRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT 309 (349)
Q Consensus 231 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 309 (349)
..+.+.+-...+|-++|.+..|..-... ..-++.+ ..++.+++.+||+.+.+.|..++..+..|+.+..+.+|-
T Consensus 260 --~gLS~~Fl~~p~~klLilAg~d~LDkdL--tiGQMQG-k~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~~~~~~ 333 (343)
T KOG2564|consen 260 --KGLSDKFLGLPVPKLLILAGVDRLDKDL--TIGQMQG-KFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNRFAEPK 333 (343)
T ss_pred --hhhhhHhhCCCccceeEEecccccCcce--eeeeecc-ceeeeeecccCceeccCCcchHHHHHHHHHhhhcccccc
Confidence 2333445566788888888888763111 1112222 378999999999999999999999999999999876644
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-20 Score=155.77 Aligned_cols=238 Identities=13% Similarity=0.083 Sum_probs=138.5
Q ss_pred ceeEEeC-CCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~ 93 (349)
..+.+.+ +|..|+-+..-|+ ..++||++||++.+... +...+..+.++||.|+.+|.||| |.|+...
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~------~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH------FAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH------HHHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 4566666 5557776655442 34799999999987522 22445677788999999999998 8886432
Q ss_pred CCCCCCCCHHHHHHHHHH---HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 94 SDDEPVLSVDDLADQIAE---VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~---~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
. ..++....+|+.. +++..+.+++.|+||||||.+|+..|... .++++|+.+|........... . .
T Consensus 84 ~----~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~---~--~ 152 (307)
T PRK13604 84 D----EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERA---L--G 152 (307)
T ss_pred c----cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHh---h--h
Confidence 2 2222223445433 33444667899999999999997666643 399999999987753211110 0 0
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
. ........ .. .... ++... ... ...+......... .......+...++++|+|+||
T Consensus 153 ~--~~~~~p~~--~l-p~~~---d~~g~--~l~---~~~f~~~~~~~~~----------~~~~s~i~~~~~l~~PvLiIH 209 (307)
T PRK13604 153 Y--DYLSLPID--EL-PEDL---DFEGH--NLG---SEVFVTDCFKHGW----------DTLDSTINKMKGLDIPFIAFT 209 (307)
T ss_pred c--ccccCccc--cc-cccc---ccccc--ccc---HHHHHHHHHhcCc----------cccccHHHHHhhcCCCEEEEE
Confidence 0 00000000 00 0000 00000 000 0011000000000 000122344667789999999
Q ss_pred eCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|++|.++ +.++.+.+.+...+++++.++|++|.+. |+. -.++.|.+.+
T Consensus 210 G~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~----~~~~~~~~~~ 259 (307)
T PRK13604 210 ANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENL----VVLRNFYQSV 259 (307)
T ss_pred cCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cch----HHHHHHHHHH
Confidence 9999999 6777888888755699999999999766 333 3455666655
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-19 Score=164.25 Aligned_cols=239 Identities=13% Similarity=0.077 Sum_probs=142.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
.+++|||+||+......+...- -...+..+.++||+|+++|++|+|.+..... ...|..+.+.+.+..+++.++.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p-~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRP-QNSLVRWLVEQGHTVFVISWRNPDASQADKT--FDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeeccc-chHHHHHHHHCCcEEEEEECCCCCcccccCC--hhhhHHHHHHHHHHHHHHhcCCCC
Confidence 5689999999976654432111 1246677888999999999999998764322 234666677778888888899999
Q ss_pred EEEEEechhHHHHH----HHHHhh-hcccceeEEecCCCCCCChhHH--hh----hhhhhHHHHhcCc-chhHH------
Q 018916 121 VMCMGVTAGAYILT----LFAMKY-RHRVLGLILVSPLCKAPSWTEW--LY----NKVMSNLLYYYGM-CGVVK------ 182 (349)
Q Consensus 121 v~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~-~~~~~------ 182 (349)
++++||||||.++. .+++.. +++|++++++++.......... .. ...+.......+. .....
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~ 343 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSL 343 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHh
Confidence 99999999999862 245554 7889999999988765421111 00 0011111111111 00000
Q ss_pred ----HHHHHhhcccccccCCCCCCchHHHHHHHHhhhh---ccchhHHHHHHHhcCC----------CChhhhccccCCc
Q 018916 183 ----ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE---RQSSNVWHFLEAINGR----------PDISEGLRKLQCR 245 (349)
Q Consensus 183 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----------~~~~~~l~~i~~P 245 (349)
+.....++.. .+... .+.. ..+..+... .....+..+++.+... .+....+.+|++|
T Consensus 344 lrp~~l~w~~~v~~-yl~g~----~~~~-fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vP 417 (532)
T TIGR01838 344 LRENDLIWNYYVDN-YLKGK----SPVP-FDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVP 417 (532)
T ss_pred cChhhHHHHHHHHH-HhcCC----Cccc-hhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCC
Confidence 0001111110 00000 0000 111111111 1222223333222211 1223568889999
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChh
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH 290 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 290 (349)
+++|.|++|.++ ..++.+.+.+++ .+.++++++||.+++++|.
T Consensus 418 vLvV~G~~D~IvP~~sa~~l~~~i~~--~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 418 VYIIATREDHIAPWQSAYRGAALLGG--PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EEEEeeCCCCcCCHHHHHHHHHHCCC--CEEEEECCCCCchHhhCCC
Confidence 999999999999 456667788886 7888999999999998764
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=151.51 Aligned_cols=260 Identities=18% Similarity=0.195 Sum_probs=147.8
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
....+.|...+.. +|+++|+||++.+...|.... ......... |+|+.+|+||||.|. . . .+....+++
T Consensus 8 ~~~~~~~~~~~~~-~~~i~~~hg~~~~~~~~~~~~---~~~~~~~~~-~~~~~~d~~g~g~s~-~--~---~~~~~~~~~ 76 (282)
T COG0596 8 DGVRLAYREAGGG-GPPLVLLHGFPGSSSVWRPVF---KVLPALAAR-YRVIAPDLRGHGRSD-P--A---GYSLSAYAD 76 (282)
T ss_pred CCeEEEEeecCCC-CCeEEEeCCCCCchhhhHHHH---HHhhccccc-eEEEEecccCCCCCC-c--c---cccHHHHHH
Confidence 3445666666644 669999999998876643311 011121123 999999999999886 1 1 345566699
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH------HhhhhhhhHHHHhcCcchhH
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE------WLYNKVMSNLLYYYGMCGVV 181 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 181 (349)
++..+++.++..+++++|||+||.+++.++.++|+++++++++++......... ....................
T Consensus 77 ~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T COG0596 77 DLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAF 156 (282)
T ss_pred HHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhh
Confidence 999999999999999999999999999999999999999999998764110000 00000000000000000000
Q ss_pred HHHHHHhhcccccccC-----CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 182 KELLLKRYFSKQEVRG-----NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 182 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
........... .+.. .................................. ......+..+++|+++++|++|.+
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~d~~ 234 (282)
T COG0596 157 AALLAALGLLA-ALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLD-RDLRAALARITVPTLIIHGEDDPV 234 (282)
T ss_pred hhhhhcccccc-cccccchhccccccccccchhHhhhhhhhcccccchhhhcccc-cccchhhccCCCCeEEEecCCCCc
Confidence 00000000000 0000 0000000011111110000000000000111111 023345677889999999999955
Q ss_pred chh--HHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 257 HSE--AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 257 ~~~--~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
.+. ...+.+.++. ..++++++++||+++.++|+.+++.+.+|++
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 235 VPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 533 3455556663 4789999999999999999999999888554
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=151.39 Aligned_cols=216 Identities=11% Similarity=0.082 Sum_probs=123.3
Q ss_pred EEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC-------CCCH
Q 018916 32 LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP-------VLSV 102 (349)
Q Consensus 32 l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~-------~~~~ 102 (349)
++|...+. +..|+||++||++.+... |......+.++||+|+++|+||||.+......... ..++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~ 88 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLV------YSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNM 88 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccch------HHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHH
Confidence 44444432 346899999999877533 32344566678999999999999975321110000 0122
Q ss_pred HHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 103 DDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 103 ~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++.+.+..+.+. ++.++++++|||+||.+++.++.++|+....++++++... . .
T Consensus 89 ~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----~-----~------------- 145 (249)
T PRK10566 89 QEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-----T-----S------------- 145 (249)
T ss_pred HHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----H-----H-------------
Confidence 3333333333332 2447899999999999999999988874444444433210 0 0
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc-CCceEEEEeCCCccc--
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFH-- 257 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~-- 257 (349)
.....+.. .... .+.....+ ......... .+....+.++ ++|+|+++|++|.++
T Consensus 146 ----~~~~~~~~-~~~~-----~~~~~~~~------------~~~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~ 202 (249)
T PRK10566 146 ----LARTLFPP-LIPE-----TAAQQAEF------------NNIVAPLAE-WEVTHQLEQLADRPLLLWHGLADDVVPA 202 (249)
T ss_pred ----HHHHhccc-cccc-----ccccHHHH------------HHHHHHHhh-cChhhhhhhcCCCCEEEEEcCCCCcCCH
Confidence 00000111 0000 00000000 001111111 1233345555 699999999999999
Q ss_pred hhHHHHHHHhccc----ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 258 SEAVHMTSKIDRR----YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 258 ~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
...+.+.+.+... +++++.++++||... ....+.+.+||++.
T Consensus 203 ~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 203 AESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 5667777777653 257778899999764 34568888999864
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=143.13 Aligned_cols=183 Identities=14% Similarity=0.109 Sum_probs=118.7
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhc---CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~---~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
|+|||+||++++..+|.... +..++. .+|+|+++|+|||| ++.++++.+++++++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~-----~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~ 61 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATL-----LKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGD 61 (190)
T ss_pred CeEEEECCCCCCcchHHHHH-----HHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCC
Confidence 68999999999887643211 123332 38999999999983 35788999999999999
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNA 199 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
+++++||||||.+++.+|.++|. ++|+++|+... . ... ..+... ....
T Consensus 62 ~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~--~-~~~-----------------------~~~~~~-~~~~-- 109 (190)
T PRK11071 62 PLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRP--F-ELL-----------------------TDYLGE-NENP-- 109 (190)
T ss_pred CeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCH--H-HHH-----------------------HHhcCC-cccc--
Confidence 99999999999999999999983 46888886541 1 100 000010 0000
Q ss_pred CCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEE
Q 018916 200 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEV 277 (349)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i 277 (349)
...+. + .-...+......+ +... +. ..+|+++++|++|.++ ..+..+.+ + ++.+.+
T Consensus 110 -~~~~~--------~--~~~~~~~~d~~~~----~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~---~--~~~~~~ 167 (190)
T PRK11071 110 -YTGQQ--------Y--VLESRHIYDLKVM----QIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYA---A--CRQTVE 167 (190)
T ss_pred -cCCCc--------E--EEcHHHHHHHHhc----CCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHH---h--cceEEE
Confidence 00000 0 0000111111111 1111 22 6788999999999999 45555555 3 567788
Q ss_pred cCCCCcccccChhhHHHHHHHHHh
Q 018916 278 QACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 278 ~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+|++|.. .+.+++.+.|.+|++
T Consensus 168 ~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 168 EGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCCCcch--hhHHHhHHHHHHHhc
Confidence 9999976 555889999999975
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-17 Score=139.99 Aligned_cols=271 Identities=14% Similarity=0.133 Sum_probs=171.4
Q ss_pred CeeEEEEEccCC---CCCeEEEecCCCCChhhhhc-----ccccchhhhh---hhcCCeEEEEECCCCCC-CCCCCCCC-
Q 018916 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ-----GLFFCPEACS---LLLHNFCIYHINPPGHE-FGAAAISD- 95 (349)
Q Consensus 29 ~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~-----~~~~~~~~~~---~l~~g~~vi~~D~~G~G-~s~~~~~~- 95 (349)
+..+.|+.+|.. ..++|+++||+.+++...-. .-+|...+-. +-...|.||+.|..|.+ .|..|.+.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 347899999963 34689999999886543211 1245322222 22357999999999986 33333221
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHcCCCcEE-EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 96 --------DEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 96 --------~~~~~~~~~~~~~l~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
..+.++++|+++.-..++++||++++. +||-||||+.|++++..||++|++++.+++........... +.
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~-~~ 193 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF-NE 193 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH-HH
Confidence 235689999999998999999999986 99999999999999999999999999999877654322111 01
Q ss_pred hhhHH------------------------HHhcCcchhHHHHHHHhhcccccccCCCCCC--chHHHHHHHHhhh-----
Q 018916 167 VMSNL------------------------LYYYGMCGVVKELLLKRYFSKQEVRGNAQVP--ESDIVQACRRLLD----- 215 (349)
Q Consensus 167 ~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----- 215 (349)
..... .+..++..+..+..+..-|.. .....+... .....+.|.+..-
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r-~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGR-RLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcc-cccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 11111 111111111111122222222 110000000 1223344443221
Q ss_pred hccchhHHHHHHHhcC------CCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEc-CCCCcccc
Q 018916 216 ERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQ-ACGSMVTE 286 (349)
Q Consensus 216 ~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~-~~gH~~~~ 286 (349)
..+...+....+++.. +.++.+.+.++++|+|++.-+.|.++ ...+++.+.++..+. +++|+ ..||..++
T Consensus 273 rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~GHDaFL 351 (368)
T COG2021 273 RFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPYGHDAFL 351 (368)
T ss_pred ccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCCCchhhh
Confidence 2344445544444432 23445569999999999999999998 577778999988443 65554 68999999
Q ss_pred cChhhHHHHHHHHHhh
Q 018916 287 EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 287 e~p~~~~~~i~~fl~~ 302 (349)
...+.+...|..||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 9999999999999975
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-17 Score=164.18 Aligned_cols=250 Identities=9% Similarity=0.038 Sum_probs=143.9
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FG 117 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~---l~ 117 (349)
.+++|||+||++.+...|.... -...+..+.++||+|+++|+ |.++.+. .....++.+++..+.+.++. +.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~-~~s~v~~L~~~g~~v~~~d~---G~~~~~~--~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTR-DDGAVGILHRAGLDPWVIDF---GSPDKVE--GGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCC-cccHHHHHHHCCCEEEEEcC---CCCChhH--cCccCCHHHHHHHHHHHHHHHHHhh
Confidence 5689999999988875532211 00124556688999999995 5455321 11246888887777666654 34
Q ss_pred CCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCC-----hh-HH-hhh-hhhh-HHHHhcCcchhHH-----
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS-----WT-EW-LYN-KVMS-NLLYYYGMCGVVK----- 182 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~-----~~-~~-~~~-~~~~-~~~~~~~~~~~~~----- 182 (349)
.++++++||||||.+++.+++.+ +++|++++++++...... .. .+ ... .... ..+..........
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 219 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQ 219 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHH
Confidence 57899999999999999998755 568999999888754311 00 00 000 0000 0000011111000
Q ss_pred --------H---HHHHhhcccccccCCCCCCchHHHHHHHHhh--hhccchhHHHHHHHhc---CCC----Ch---hhhc
Q 018916 183 --------E---LLLKRYFSKQEVRGNAQVPESDIVQACRRLL--DERQSSNVWHFLEAIN---GRP----DI---SEGL 239 (349)
Q Consensus 183 --------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~----~~---~~~l 239 (349)
. .+...+..+ .. ..+++....+.... ...........++.+. ... .. ...+
T Consensus 220 ~l~p~~~~~~~~~~~~~l~~~-~~-----~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L 293 (994)
T PRK07868 220 MLDPVKTAKARVDFLRQLHDR-EA-----LLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTL 293 (994)
T ss_pred hcChhHHHHHHHHHHHhcCch-hh-----hccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcch
Confidence 0 011111111 10 00111111211111 0111112222222221 100 11 1247
Q ss_pred cccCCceEEEEeCCCccc--hhHHHHHHHhcccceeE-EEEcCCCCcccc---cChhhHHHHHHHHHhhcc
Q 018916 240 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL-VEVQACGSMVTE---EQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~---e~p~~~~~~i~~fl~~~~ 304 (349)
.+|++|+|+|+|++|.++ ...+.+.+.+++ .++ ..++++||+.++ ..++++...|.+||++..
T Consensus 294 ~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~--a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 294 ADITCPVLAFVGEVDDIGQPASVRGIRRAAPN--AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 899999999999999998 566778888887 776 677899999888 457889999999999874
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-18 Score=143.52 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=94.3
Q ss_pred eEEeCCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
.+++...+.+....+.+. .+++|||+||++.+...+ . .+|......+.++||+|+++|+||||.|..+. ..
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~-~-~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~----~~ 76 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKS-R-RMVALQARAFAAGGFGVLQIDLYGCGDSAGDF----AA 76 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccch-h-HHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc----cc
Confidence 456666666555444432 257899999997643221 1 12444455666789999999999999986321 23
Q ss_pred CCHHHHHHHHHHH---HHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 100 LSVDDLADQIAEV---LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 100 ~~~~~~~~~l~~~---l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
.+++++++|+..+ +++.+.++++++||||||.+++.+|.++|++++++|+++|.....
T Consensus 77 ~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 77 ARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 5777888887664 455567899999999999999999999999999999999876643
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-16 Score=135.52 Aligned_cols=281 Identities=15% Similarity=0.135 Sum_probs=157.5
Q ss_pred CCCCCCceeEEeC-CCeeEEEEEc--cC-------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCC
Q 018916 15 TPPPSGKDNLIKT-SHGSLSVTIY--GD-------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP 84 (349)
Q Consensus 15 ~~~~~~~~~~i~~-~~~~l~~~~~--g~-------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~ 84 (349)
...+..++..+++ +||.+.+.-. .. ...|.||++||+.+++...+- ...+..+.++||+|++++.|
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV----r~lv~~a~~~G~r~VVfN~R 163 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV----RHLVHEAQRKGYRVVVFNHR 163 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH----HHHHHHHHhCCcEEEEECCC
Confidence 3445567888887 6777665433 11 256999999999877655322 23445777889999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcc---cceeEEecCCCCC--CCh
Q 018916 85 GHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR---VLGLILVSPLCKA--PSW 159 (349)
Q Consensus 85 G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~~--~~~ 159 (349)
|+|.+.-..+.-......+|+.+.+..+.+.+-..+...+|.||||.+...|..+..++ +.++.+.+|+-.. ...
T Consensus 164 G~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~ 243 (409)
T KOG1838|consen 164 GLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRS 243 (409)
T ss_pred CCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhH
Confidence 99887644333344456677777777777777778899999999999999999875543 4555555555432 111
Q ss_pred hHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhc
Q 018916 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL 239 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (349)
..+.....+.......++...+.. -..-++.. ...-. .......+..+-+.+. ...-++.. ...+....+....+
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~-~r~~~~~~-~vd~d-~~~~~~SvreFD~~~t-~~~~gf~~-~deYY~~aSs~~~v 318 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLR-HRHTLFED-PVDFD-VILKSRSVREFDEALT-RPMFGFKS-VDEYYKKASSSNYV 318 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhh-hhhhhhhc-cchhh-hhhhcCcHHHHHhhhh-hhhcCCCc-HHHHHhhcchhhhc
Confidence 111111111111111111111100 00001111 00000 0000000011111000 00001111 12222224556778
Q ss_pred cccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccC----hhhHHHH-HHHHHhhcc
Q 018916 240 RKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQ----PHAMLIP-MEYFLMGYG 304 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~----p~~~~~~-i~~fl~~~~ 304 (349)
.+|++|+|+|++.+|+++ +......+...++++-+++-..+||..++|. +....+. +.+|+...-
T Consensus 319 ~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 319 DKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 999999999999999999 4344444444555588888899999999976 2233333 777776653
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-16 Score=131.50 Aligned_cols=268 Identities=13% Similarity=0.085 Sum_probs=143.3
Q ss_pred CCCceeEEeCCCe-eEEEEEcc---CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHG-SLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 18 ~~~~~~~i~~~~~-~l~~~~~g---~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
+..+++.+.+.++ .+...-.. ...+|.||++||+.+++.+-+.. ..+..+.++||.|++++.|||+.+....
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r----~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~ 122 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYAR----GLMRALSRRGWLVVVFHFRGCSGEANTS 122 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHH----HHHHHHHhcCCeEEEEecccccCCcccC
Confidence 3445667777544 33222222 24568999999998887554332 3445667889999999999997665433
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCCCCChhH--------Hh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKAPSWTE--------WL 163 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~--------~~ 163 (349)
+.-......+|++..+..+.+.....++..+|.|+||.....+..+..+ .+.+.+.++.+........ ..
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~l 202 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRL 202 (345)
T ss_pred cceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhh
Confidence 3223333345655555555555666899999999999555545544333 3555555555443311000 00
Q ss_pred hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCc-hHHHHHHHHhhhh-----ccchhHHHHHHHhcCCCChhh
Q 018916 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPE-SDIVQACRRLLDE-----RQSSNVWHFLEAINGRPDISE 237 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 237 (349)
....+.+.+ ...+.. -+..+ .+ .. ... .+.++.++....- ....++....+.+.. .+...
T Consensus 203 y~r~l~~~L-----~~~~~~-kl~~l-~~-~~-----p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~-aSs~~ 268 (345)
T COG0429 203 YSRYLLRNL-----KRNAAR-KLKEL-EP-SL-----PGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQ-ASSLP 268 (345)
T ss_pred hHHHHHHHH-----HHHHHH-HHHhc-Cc-cc-----CcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHh-ccccc
Confidence 001111100 000000 00001 01 10 001 2222222221110 011112222222222 34456
Q ss_pred hccccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccC----hh-hHHHHHHHHHhhc
Q 018916 238 GLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQ----PH-AMLIPMEYFLMGY 303 (349)
Q Consensus 238 ~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~----p~-~~~~~i~~fl~~~ 303 (349)
.+.+|.+|+|+|++.+|+++ +..........++++.+..-+.+||..++.. +. -..+.+.+||+..
T Consensus 269 ~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 269 LLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 78999999999999999999 3233222222334599999999999999873 32 3456777887754
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-15 Score=123.45 Aligned_cols=241 Identities=13% Similarity=0.149 Sum_probs=147.1
Q ss_pred EEEccCCCCC--eEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 018916 34 VTIYGDQDKP--ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE 111 (349)
Q Consensus 34 ~~~~g~~~~p--~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~ 111 (349)
|....+.+.+ +||=+||.++++.. +......+-+.|.|+|.+++||+|.+.. .....|+-++-...+.+
T Consensus 25 y~D~~~~gs~~gTVv~~hGsPGSH~D------FkYi~~~l~~~~iR~I~iN~PGf~~t~~---~~~~~~~n~er~~~~~~ 95 (297)
T PF06342_consen 25 YEDSLPSGSPLGTVVAFHGSPGSHND------FKYIRPPLDEAGIRFIGINYPGFGFTPG---YPDQQYTNEERQNFVNA 95 (297)
T ss_pred EEecCCCCCCceeEEEecCCCCCccc------hhhhhhHHHHcCeEEEEeCCCCCCCCCC---CcccccChHHHHHHHHH
Confidence 4444444433 89999999998855 2222234556799999999999998874 33456899999999999
Q ss_pred HHHHcCCC-cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC--ChhHHhhhhhhhHHHHhcCcchhHHHHHHHh
Q 018916 112 VLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP--SWTEWLYNKVMSNLLYYYGMCGVVKELLLKR 188 (349)
Q Consensus 112 ~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (349)
+++.++++ +++.+|||.|+-.|+.+|..+| +.++++++|....+ +.........+...+.. +...+.+.+...
T Consensus 96 ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~--lp~~~~~~i~~~ 171 (297)
T PF06342_consen 96 LLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDL--LPRFIINAIMYF 171 (297)
T ss_pred HHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHH--hhHHHHHHHHHH
Confidence 99999985 6889999999999999999985 67999999987543 21111111111111110 111222233333
Q ss_pred hcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHH
Q 018916 189 YFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 266 (349)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~ 266 (349)
++..-.+.- ...++....++.... ..-..-. ...+.+.+-++|+++++|.+|.++ +...++...
T Consensus 172 ~y~~iG~KV---~~GeeA~na~r~m~~-~df~~q~----------~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~ 237 (297)
T PF06342_consen 172 YYRMIGFKV---SDGEEAINAMRSMQN-CDFEEQK----------EYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMK 237 (297)
T ss_pred HHHHhCeee---cChHHHHHHHHHHHh-cCHHHHH----------HHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHH
Confidence 322212211 112333333332221 1111111 222334455689999999999997 333333333
Q ss_pred hcc-------------------------cceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 267 IDR-------------------------RYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 267 ~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+.+ ....-+.+.+.||+.+-.+++-+++.+...|+
T Consensus 238 f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 238 FKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred hCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 221 11335667788999888888888888877653
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-16 Score=133.60 Aligned_cols=206 Identities=11% Similarity=0.131 Sum_probs=123.6
Q ss_pred CCCeeEEEEEccC-----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCC---CC---CCC-
Q 018916 27 TSHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFG---AA---AIS- 94 (349)
Q Consensus 27 ~~~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s---~~---~~~- 94 (349)
+-+..+.|.++-| ...|+|+|+||++++...+.. +......+...|+.|+.+|..++|.. .. ...
T Consensus 27 ~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~---~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~ 103 (283)
T PLN02442 27 TLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQ---KSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGV 103 (283)
T ss_pred ccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHH---hhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCC
Confidence 4556777776643 246899999999887655422 11111223356999999999877621 00 000
Q ss_pred ----------C-----CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh
Q 018916 95 ----------D-----DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (349)
Q Consensus 95 ----------~-----~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (349)
. ....+-.+++.+.+....+.++.++++++||||||..|+.++.++|+++++++.+++.......
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~ 183 (283)
T PLN02442 104 GAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINC 183 (283)
T ss_pred CcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccC
Confidence 0 0001223455555555555667789999999999999999999999999999999987553211
Q ss_pred hHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhc
Q 018916 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL 239 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (349)
. +. . .....++.. ..+..+.+ . .......+
T Consensus 184 ~-~~--~-----------------~~~~~~~g~----------~~~~~~~~-------d-------------~~~~~~~~ 213 (283)
T PLN02442 184 P-WG--Q-----------------KAFTNYLGS----------DKADWEEY-------D-------------ATELVSKF 213 (283)
T ss_pred c-hh--h-----------------HHHHHHcCC----------ChhhHHHc-------C-------------hhhhhhhc
Confidence 0 00 0 001112221 11111110 0 01112223
Q ss_pred cccCCceEEEEeCCCccchh---HHHHHHHhccc--ceeEEEEcCCCCccc
Q 018916 240 RKLQCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVT 285 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~~~---~~~~~~~~~~~--~~~~~~i~~~gH~~~ 285 (349)
...++|+++++|++|.+++. .+.+.+.+... +++++++++.+|..+
T Consensus 214 ~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 214 NDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 45678999999999988742 45565555432 378999999999755
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=122.93 Aligned_cols=143 Identities=19% Similarity=0.278 Sum_probs=103.1
Q ss_pred eEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEE
Q 018916 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMC 123 (349)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~l 123 (349)
+|||+||++.+... |......+.++||.|+.+|+||+|.+.. ....+++.+++. .+..+.+++++
T Consensus 1 ~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~i~l 65 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD------YQPLAEALAEQGYAVVAFDYPGHGDSDG-------ADAVERVLADIR--AGYPDPDRIIL 65 (145)
T ss_dssp EEEEECTTTTTTHH------HHHHHHHHHHTTEEEEEESCTTSTTSHH-------SHHHHHHHHHHH--HHHCTCCEEEE
T ss_pred CEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEecCCCCccch-------hHHHHHHHHHHH--hhcCCCCcEEE
Confidence 68999999988655 2344467788899999999999987531 112233333322 12236789999
Q ss_pred EEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCc
Q 018916 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPE 203 (349)
Q Consensus 124 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
+|||+||.+++.++.++ .+++++|++++... .
T Consensus 66 ~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------~----------- 97 (145)
T PF12695_consen 66 IGHSMGGAIAANLAARN-PRVKAVVLLSPYPD------------------------------------S----------- 97 (145)
T ss_dssp EEETHHHHHHHHHHHHS-TTESEEEEESESSG------------------------------------C-----------
T ss_pred EEEccCcHHHHHHhhhc-cceeEEEEecCccc------------------------------------h-----------
Confidence 99999999999999988 78999999998200 0
Q ss_pred hHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCC
Q 018916 204 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACG 281 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~g 281 (349)
+.+...++|+++++|++|.++ +..+.+.+.++ ...+++++++++
T Consensus 98 ---------------------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~ 143 (145)
T PF12695_consen 98 ---------------------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAG 143 (145)
T ss_dssp ---------------------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-
T ss_pred ---------------------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCc
Confidence 000112349999999999998 56677888888 358999999999
Q ss_pred Cc
Q 018916 282 SM 283 (349)
Q Consensus 282 H~ 283 (349)
|+
T Consensus 144 H~ 145 (145)
T PF12695_consen 144 HF 145 (145)
T ss_dssp TT
T ss_pred Cc
Confidence 95
|
... |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-15 Score=119.98 Aligned_cols=225 Identities=14% Similarity=0.122 Sum_probs=139.5
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HcCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN-HFGL 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~-~l~~ 118 (349)
..++.++++|=.|+++.. |.. | ...+.....++++++||+|.-- ......+++++++.+...+. .+--
T Consensus 5 ~~~~~L~cfP~AGGsa~~-fr~--W----~~~lp~~iel~avqlPGR~~r~----~ep~~~di~~Lad~la~el~~~~~d 73 (244)
T COG3208 5 GARLRLFCFPHAGGSASL-FRS--W----SRRLPADIELLAVQLPGRGDRF----GEPLLTDIESLADELANELLPPLLD 73 (244)
T ss_pred CCCceEEEecCCCCCHHH-HHH--H----HhhCCchhheeeecCCCccccc----CCcccccHHHHHHHHHHHhccccCC
Confidence 456678888877777544 332 3 2445567999999999997532 22345799999999988887 4445
Q ss_pred CcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV 195 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
+++.++||||||++|.++|.+... ...++.+.+...+........ .......++. .+...-..+..+
T Consensus 74 ~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i---------~~~~D~~~l~-~l~~lgG~p~e~ 143 (244)
T COG3208 74 APFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQI---------HHLDDADFLA-DLVDLGGTPPEL 143 (244)
T ss_pred CCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCc---------cCCCHHHHHH-HHHHhCCCChHH
Confidence 789999999999999999987643 256677666554421110000 0001111111 111111111111
Q ss_pred cCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhccccee
Q 018916 196 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSA 273 (349)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~ 273 (349)
. .++++.+.+.-.+. ..+..+..+ .... -..++||+.++.|++|..+ +....+.+...+ ..+
T Consensus 144 l-----ed~El~~l~LPilR--------AD~~~~e~Y-~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~ 207 (244)
T COG3208 144 L-----EDPELMALFLPILR--------ADFRALESY-RYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTKG-DFT 207 (244)
T ss_pred h-----cCHHHHHHHHHHHH--------HHHHHhccc-ccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhcC-Cce
Confidence 1 14444444433332 222333321 1111 2578999999999999998 444446666553 589
Q ss_pred EEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 274 LVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 274 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+..++ +||+...++.+++.+.|.+.+..
T Consensus 208 l~~fd-GgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 208 LRVFD-GGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred EEEec-CcceehhhhHHHHHHHHHHHhhh
Confidence 99996 99999999999999999988853
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-15 Score=126.23 Aligned_cols=127 Identities=10% Similarity=0.098 Sum_probs=85.0
Q ss_pred eCCCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECC--CCCCCCCCCC----
Q 018916 26 KTSHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINP--PGHEFGAAAI---- 93 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~--~G~G~s~~~~---- 93 (349)
...+..+.|.++.|+ ..|+|+|+||++.+...|... ..+..++ ..|+.|+++|. +|+|.+....
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~----~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~ 96 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIK----AGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDF 96 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhh----hHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccc
Confidence 345556666666542 468999999999887664211 1122333 35999999998 5554322100
Q ss_pred ------------CCCCCCCCHHH-HHHHHHHHHHH---cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 94 ------------SDDEPVLSVDD-LADQIAEVLNH---FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 94 ------------~~~~~~~~~~~-~~~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
......+...+ +++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++....
T Consensus 97 g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 97 GKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred cCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 00001233333 46777777765 35578999999999999999999999999999999887653
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=121.71 Aligned_cols=209 Identities=16% Similarity=0.140 Sum_probs=133.3
Q ss_pred ceeEEeCCCeeE--EEEEccCCC-CCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSL--SVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 21 ~~~~i~~~~~~l--~~~~~g~~~-~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
+-..+.+..+.. .++..-+.. .+++++.||...+-.... .....+.. -+++|+.+|++|+|.|....
T Consensus 36 ~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~------~~~~~l~~~ln~nv~~~DYSGyG~S~G~p--- 106 (258)
T KOG1552|consen 36 EVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMV------ELFKELSIFLNCNVVSYDYSGYGRSSGKP--- 106 (258)
T ss_pred ceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHH------HHHHHHhhcccceEEEEecccccccCCCc---
Confidence 334455544432 222222333 589999999855543211 11122222 38999999999999987421
Q ss_pred CCCCCHHHHHHHHHHHH-HHcC-CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHh
Q 018916 97 EPVLSVDDLADQIAEVL-NHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l-~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (349)
.. ..+.+-++.+.+.+ +..| .++++|+|+|+|...++.+|.+.| +.++||.+|....... +..
T Consensus 107 sE-~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv------------~~~ 171 (258)
T KOG1552|consen 107 SE-RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV------------AFP 171 (258)
T ss_pred cc-ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhh------------hcc
Confidence 12 22222233333333 4443 578999999999999999999998 9999999986543110 000
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
.. ....++.. ....+..+.++||+|+++|++|
T Consensus 172 ~~--------~~~~~~d~----------------------------------------f~~i~kI~~i~~PVLiiHgtdD 203 (258)
T KOG1552|consen 172 DT--------KTTYCFDA----------------------------------------FPNIEKISKITCPVLIIHGTDD 203 (258)
T ss_pred Cc--------ceEEeecc----------------------------------------ccccCcceeccCCEEEEecccC
Confidence 00 00000000 1114556788999999999999
Q ss_pred ccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 255 PFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.++ .....+.+..++ ..+-.++.|+||.- ++...++.+.+..|+...
T Consensus 204 evv~~sHg~~Lye~~k~-~~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 204 EVVDFSHGKALYERCKE-KVEPLWVKGAGHND-IELYPEYIEHLRRFISSV 252 (258)
T ss_pred ceecccccHHHHHhccc-cCCCcEEecCCCcc-cccCHHHHHHHHHHHHHh
Confidence 999 677889998887 24777888999964 466678888899998765
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=116.02 Aligned_cols=218 Identities=16% Similarity=0.132 Sum_probs=133.6
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
++...+|++||+-.+...-+. ...+..+.+.|+.++.+|++|.|.|... ...-.....|+|+..+++++...
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~----~~vA~~~e~~gis~fRfDF~GnGeS~gs----f~~Gn~~~eadDL~sV~q~~s~~ 102 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIM----KNVAKALEKEGISAFRFDFSGNGESEGS----FYYGNYNTEADDLHSVIQYFSNS 102 (269)
T ss_pred CCceEEEEeeccccccchHHH----HHHHHHHHhcCceEEEEEecCCCCcCCc----cccCcccchHHHHHHHHHHhccC
Confidence 467799999999777533222 1233455567999999999999998743 22234455569999999887543
Q ss_pred -c--EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccccccc
Q 018916 120 -A--VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVR 196 (349)
Q Consensus 120 -~--v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
+ -+++|||-||.+++.+|.++.+ ++-+|.++.-..................+...++...-. -.
T Consensus 103 nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~------------rk 169 (269)
T KOG4667|consen 103 NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGP------------RK 169 (269)
T ss_pred ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCc------------cc
Confidence 2 3689999999999999999987 777777776655443322111111111111111111100 00
Q ss_pred CCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc--cCCceEEEEeCCCccc--hhHHHHHHHhcccce
Q 018916 197 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK--LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS 272 (349)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~ 272 (349)
+ ....-...+.+... ++ .+..+...+ .+||||-++|..|.++ +.+.++++.+++ .
T Consensus 170 G--~y~~rvt~eSlmdr---------------Ln--td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n--H 228 (269)
T KOG4667|consen 170 G--KYGYRVTEESLMDR---------------LN--TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN--H 228 (269)
T ss_pred C--CcCceecHHHHHHH---------------Hh--chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC--C
Confidence 0 00000001111110 11 223333333 3799999999999999 789999999999 9
Q ss_pred eEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 273 ALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 273 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
++..+||+.|.... ..++.......|.
T Consensus 229 ~L~iIEgADHnyt~-~q~~l~~lgl~f~ 255 (269)
T KOG4667|consen 229 KLEIIEGADHNYTG-HQSQLVSLGLEFI 255 (269)
T ss_pred ceEEecCCCcCccc-hhhhHhhhcceeE
Confidence 99999999997654 3344444444444
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=117.35 Aligned_cols=223 Identities=12% Similarity=0.061 Sum_probs=140.1
Q ss_pred eeEEeC-CCeeEE-EEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKT-SHGSLS-VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 22 ~~~i~~-~~~~l~-~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+..+.| +..+++ |......+.|+++.+||..++- +.+....| .-+..-+.+|+.+++||+|.|....++
T Consensus 56 ~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNm-Ghr~~i~~----~fy~~l~mnv~ivsYRGYG~S~GspsE---- 126 (300)
T KOG4391|consen 56 RIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNM-GHRLPIAR----VFYVNLKMNVLIVSYRGYGKSEGSPSE---- 126 (300)
T ss_pred EEEEEcCcceeEeeeeecccCCCceEEEEccCCCcc-cchhhHHH----HHHHHcCceEEEEEeeccccCCCCccc----
Confidence 333444 445554 3444445889999999988774 22221212 122345899999999999998743221
Q ss_pred CCHHHHHHH-HHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcC
Q 018916 100 LSVDDLADQ-IAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 100 ~~~~~~~~~-l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (349)
..+.--++. +..++.+ +...+++++|-|+||.+|+.+|++..+++.++++-++....+.......... .
T Consensus 127 ~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~--------~ 198 (300)
T KOG4391|consen 127 EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPF--------P 198 (300)
T ss_pred cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccc--------h
Confidence 112211222 2223322 2346799999999999999999999999999999888765532111000000 0
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
+ . ....+... +.+ .-...+.+.+.|.|+|.|.+|.+
T Consensus 199 ~-k-----~i~~lc~k----------------------------------n~~----~S~~ki~~~~~P~LFiSGlkDel 234 (300)
T KOG4391|consen 199 M-K-----YIPLLCYK----------------------------------NKW----LSYRKIGQCRMPFLFISGLKDEL 234 (300)
T ss_pred h-h-----HHHHHHHH----------------------------------hhh----cchhhhccccCceEEeecCcccc
Confidence 0 0 00000000 000 01112335578999999999999
Q ss_pred c--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcccc
Q 018916 257 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 306 (349)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 306 (349)
+ ...+.+.+..+....++.++|++.|.-.+- .+-+.++|.+||.+.+..
T Consensus 235 VPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 235 VPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 9 466779999998889999999999965543 357889999999998654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.4e-15 Score=122.25 Aligned_cols=189 Identities=16% Similarity=0.166 Sum_probs=114.6
Q ss_pred hhhhcCCeEEEEECCCCCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhc
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAAAI----SDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH 142 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (349)
..+.++||.|+.+|+||.+...... ........++|..+.+..+++.. +.+++.++|||+||.+++.++.++|+
T Consensus 8 ~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~ 87 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD 87 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC
T ss_pred HHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccce
Confidence 4555899999999999986322110 11112234455555555555443 34789999999999999999999999
Q ss_pred ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhH
Q 018916 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNV 222 (349)
Q Consensus 143 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (349)
++++++..++............ . ........+ .. . ...++....
T Consensus 88 ~f~a~v~~~g~~d~~~~~~~~~------------~---~~~~~~~~~-~~-~------~~~~~~~~~------------- 131 (213)
T PF00326_consen 88 RFKAAVAGAGVSDLFSYYGTTD------------I---YTKAEYLEY-GD-P------WDNPEFYRE------------- 131 (213)
T ss_dssp GSSEEEEESE-SSTTCSBHHTC------------C---HHHGHHHHH-SS-T------TTSHHHHHH-------------
T ss_pred eeeeeeccceecchhccccccc------------c---ccccccccc-Cc-c------chhhhhhhh-------------
Confidence 9999999998776543222110 0 000000000 00 0 001111111
Q ss_pred HHHHHHhcCCCChhhhccc--cCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccc-cChhhHHHH
Q 018916 223 WHFLEAINGRPDISEGLRK--LQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIP 295 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~l~~--i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-e~p~~~~~~ 295 (349)
...+ ..+.+ +++|+|+++|++|..+ ..+..+.+.+... ..++++++++||.... +...+..+.
T Consensus 132 ---~s~~-------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 132 ---LSPI-------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp ---HHHG-------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred ---hccc-------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 1111 11223 7899999999999998 6677777777653 3899999999995553 556678899
Q ss_pred HHHHHhhc
Q 018916 296 MEYFLMGY 303 (349)
Q Consensus 296 i~~fl~~~ 303 (349)
+.+|+++.
T Consensus 202 ~~~f~~~~ 209 (213)
T PF00326_consen 202 ILDFFDKY 209 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-14 Score=136.11 Aligned_cols=232 Identities=16% Similarity=0.125 Sum_probs=144.4
Q ss_pred ceeEEeC-CCeeEEEEEccCC--C----CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC-
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ--D----KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA- 92 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~--~----~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~- 92 (349)
+...+.. +|..++.....|. + -|+||++||.+.....+ . +......+..+||.|+.++.||.+.-...
T Consensus 366 e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~--~--~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 366 EPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGY--S--FNPEIQVLASAGYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred eEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCcccccc--c--cchhhHHHhcCCeEEEEeCCCCCCccHHHH
Confidence 4555666 4558887776652 1 27999999997554442 1 22455688899999999999986431110
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 93 ---ISDDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 93 ---~~~~~~~~~~~~~~~~l~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
.........++|+.+.+. +++..+. +++.++|||+||+.++..+.+.| .+++.+...+.........
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~----- 514 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFG----- 514 (620)
T ss_pred HHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcc-----
Confidence 011223457777777777 5555543 58999999999999999998888 6666665555433210000
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCce
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 246 (349)
.. .....+........ .....+. +.. ........++++|+
T Consensus 515 ---------~~-------~~~~~~~~~~~~~~----~~~~~~~-------------------~~~-~sp~~~~~~i~~P~ 554 (620)
T COG1506 515 ---------ES-------TEGLRFDPEENGGG----PPEDREK-------------------YED-RSPIFYADNIKTPL 554 (620)
T ss_pred ---------cc-------chhhcCCHHHhCCC----cccChHH-------------------HHh-cChhhhhcccCCCE
Confidence 00 00000000000000 0000000 000 22334456889999
Q ss_pred EEEEeCCCccc--hhHHHHHHHhcc--cceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 247 LIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 247 lii~g~~D~~~--~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
|+|||++|..+ +.+..+.+.+.. ..++++++|+.+|.+.. ++...+.+.+.+|+++.
T Consensus 555 LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 555 LLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred EEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 99999999988 677788887764 34899999999998777 55667788888888875
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.6e-14 Score=120.33 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=70.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHH-
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD---LADQIAEVLNH- 115 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~---~~~~l~~~l~~- 115 (349)
...|+|||+||++.+... |......+.++||.|+++|++|++.+. ....+++ ..+.+.+.++.
T Consensus 50 g~~PvVv~lHG~~~~~~~------y~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSF------YSQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CCCCEEEEECCCCCCccc------HHHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHHHHHHHhhhhhh
Confidence 456899999999876532 434445666789999999999974321 1123333 22223222222
Q ss_pred ------cCCCcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCC
Q 018916 116 ------FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 155 (349)
Q Consensus 116 ------l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 155 (349)
.+.++++++|||+||.+|+.+|.++++ +++++++++|...
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 234689999999999999999998874 5788888887643
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.4e-15 Score=130.88 Aligned_cols=108 Identities=11% Similarity=0.113 Sum_probs=79.6
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhh-hhhc--CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEAC-SLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~-~~l~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (349)
..+|++|+|||++.++ .+. .|...+. .++. .+|+||++|++|+|.+..+.. . .....+++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~-~~~---~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a---~-~~t~~vg~~la~lI~~L 110 (442)
T TIGR03230 39 HETKTFIVIHGWTVTG-MFE---SWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS---A-AYTKLVGKDVAKFVNWM 110 (442)
T ss_pred CCCCeEEEECCCCcCC-cch---hhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc---c-ccHHHHHHHHHHHHHHH
Confidence 4689999999998754 110 1333223 3332 379999999999987653211 1 23466677777777654
Q ss_pred ------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 117 ------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 ------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+.++++|+||||||.+|..++.++|++|.++++++|+.+
T Consensus 111 ~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 111 QEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 368999999999999999999999999999999999764
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-14 Score=117.01 Aligned_cols=176 Identities=13% Similarity=0.038 Sum_probs=104.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC----C---CCCCCCC---CHHHHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA----I---SDDEPVL---SVDDLADQI 109 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~----~---~~~~~~~---~~~~~~~~l 109 (349)
+..|+|||+||+|++...+ .+....+...++.+..++.+|....... + ....... .+.+..+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~------~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l 87 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAM------GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTF 87 (232)
T ss_pred CCCcEEEEEeCCCCChHHH------HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHH
Confidence 4678999999999997663 2333344444555555556665321100 0 0000011 122222223
Q ss_pred HH----HHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHH
Q 018916 110 AE----VLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (349)
Q Consensus 110 ~~----~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
.+ +.+.+++ ++++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 88 ~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------------------- 140 (232)
T PRK11460 88 IETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------------------- 140 (232)
T ss_pred HHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc---------------------------
Confidence 33 3334443 57999999999999999999998877777765431100
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 261 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~ 261 (349)
. + . . ...+.|+++++|++|+++ +..+
T Consensus 141 -----~--~-~--------~------------------------------------~~~~~pvli~hG~~D~vvp~~~~~ 168 (232)
T PRK11460 141 -----L--P-E--------T------------------------------------APTATTIHLIHGGEDPVIDVAHAV 168 (232)
T ss_pred -----c--c-c--------c------------------------------------ccCCCcEEEEecCCCCccCHHHHH
Confidence 0 0 0 0 012579999999999999 5666
Q ss_pred HHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 262 HMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 262 ~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
++.+.+... +++++.++++||.+..+.-+.+.+.|.++|
T Consensus 169 ~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 169 AAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 677766532 378888999999886433333333333333
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-13 Score=117.16 Aligned_cols=238 Identities=10% Similarity=0.021 Sum_probs=132.7
Q ss_pred CceeEEeCCCeeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
.+...+...++.+.++.+.+ ...|+||++||.|....+.. .|......+.. .|+.|+.+|+|......
T Consensus 57 ~~~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~---~~~~~~~~la~~~g~~Vv~vdYrlape~~------ 127 (318)
T PRK10162 57 TRAYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNLD---THDRIMRLLASYSGCTVIGIDYTLSPEAR------ 127 (318)
T ss_pred EEEEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCch---hhhHHHHHHHHHcCCEEEEecCCCCCCCC------
Confidence 34455666666666666544 34689999999774322111 12233334444 49999999999763221
Q ss_pred CCCCCHHHHHHHHHH---HHHHcCC--CcEEEEEechhHHHHHHHHHhh------hcccceeEEecCCCCCCChhHHhhh
Q 018916 97 EPVLSVDDLADQIAE---VLNHFGL--GAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYN 165 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~---~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (349)
....++|..+.+.. ..+.+++ ++++++|+|+||.+|+.++.+. +.++.+++++.|...........
T Consensus 128 -~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~-- 204 (318)
T PRK10162 128 -FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRR-- 204 (318)
T ss_pred -CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHH--
Confidence 12345555444333 3345654 5899999999999999988754 25688999998876542111000
Q ss_pred hhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc
Q 018916 166 KVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 245 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 245 (349)
. ........ .....+.+...+........ ..+. ......+..--.|
T Consensus 205 -~-----~~~~~~~l----------------------~~~~~~~~~~~y~~~~~~~~----~p~~--~p~~~~l~~~lPp 250 (318)
T PRK10162 205 -L-----LGGVWDGL----------------------TQQDLQMYEEAYLSNDADRE----SPYY--CLFNNDLTRDVPP 250 (318)
T ss_pred -H-----hCCCcccc----------------------CHHHHHHHHHHhCCCccccC----Cccc--CcchhhhhcCCCC
Confidence 0 00000000 00111111111110000000 0000 0000112112358
Q ss_pred eEEEEeCCCccchhHHHHHHHhcccc--eeEEEEcCCCCcccc-----cChhhHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 303 (349)
+++++|+.|++.+..+.+.+++...+ ++++++++..|.... +...+..+.+.+||++.
T Consensus 251 ~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 251 CFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred eEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888886543 889999999996543 22345666777788754
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=119.99 Aligned_cols=249 Identities=11% Similarity=0.044 Sum_probs=146.0
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
.|+||++.-+.++.... -...+..++. |+.|+..|+..-+... ......+++|+++-+.++++++|.+ +
T Consensus 102 ~~pvLiV~Pl~g~~~~L-----~RS~V~~Ll~-g~dVYl~DW~~p~~vp----~~~~~f~ldDYi~~l~~~i~~~G~~-v 170 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATL-----LRSTVEALLP-DHDVYITDWVNARMVP----LSAGKFDLEDYIDYLIEFIRFLGPD-I 170 (406)
T ss_pred CCcEEEEcCCchHHHHH-----HHHHHHHHhC-CCcEEEEeCCCCCCCc----hhcCCCCHHHHHHHHHHHHHHhCCC-C
Confidence 37999998887555442 2356677778 9999999998875432 1234589999999999999999876 9
Q ss_pred EEEEechhHHHHHHHHHhh-----hcccceeEEecCCCCCCCh---hH-Hhhhh---hhhHHH-Hh-----cCcc-hhHH
Q 018916 122 MCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAPSW---TE-WLYNK---VMSNLL-YY-----YGMC-GVVK 182 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~---~~-~~~~~---~~~~~~-~~-----~~~~-~~~~ 182 (349)
+++|+|+||..++.+++.. |++++++++++++...... .. +.... .+.... .. .+.. ...+
T Consensus 171 ~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~P 250 (406)
T TIGR01849 171 HVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYP 250 (406)
T ss_pred cEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccC
Confidence 9999999999988776654 6679999999998865321 11 11000 000000 00 0000 0111
Q ss_pred HHHHHhhc---ccc-----------cccCCCCCCchHHHHHHHHhhhh---ccchhHHHHHHHhcCCCChh---------
Q 018916 183 ELLLKRYF---SKQ-----------EVRGNAQVPESDIVQACRRLLDE---RQSSNVWHFLEAINGRPDIS--------- 236 (349)
Q Consensus 183 ~~~~~~~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------- 236 (349)
..+....| ++. .+... ..+..+....+..++.. .....+...++.+.....+.
T Consensus 251 G~~~~~~F~~mnp~r~~~~~~~~~~~l~~g-d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~ 329 (406)
T TIGR01849 251 GFLQLAGFISMNLDRHTKAHSDFFLHLVKG-DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGK 329 (406)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHhcC-CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCE
Confidence 11111111 100 11000 00011111111111111 12223334443332211111
Q ss_pred -hhccccC-CceEEEEeCCCccc--hhHHHHHHH---hcccceeEEEEcCCCCcccc---cChhhHHHHHHHHHhh
Q 018916 237 -EGLRKLQ-CRSLIFVGESSPFH--SEAVHMTSK---IDRRYSALVEVQACGSMVTE---EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 237 -~~l~~i~-~Pvlii~g~~D~~~--~~~~~~~~~---~~~~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 302 (349)
-++++|+ +|+|.+.|++|.++ ..++.+.+. ++..+.+.+..+++||+..+ ..++++.-.|.+||.+
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 2477899 99999999999999 455555555 46555667788889998877 3457888999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=127.79 Aligned_cols=121 Identities=13% Similarity=0.135 Sum_probs=85.7
Q ss_pred CCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHH
Q 018916 28 SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (349)
Q Consensus 28 ~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 104 (349)
+|.+|++..+-+ +..|+||++||++.+...... . .......++++||.|+++|+||+|.|+.... .++ ..
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~-~-~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~----~~~-~~ 77 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWG-L-DKTEPAWFVAQGYAVVIQDTRGRGASEGEFD----LLG-SD 77 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccc-c-ccccHHHHHhCCcEEEEEeccccccCCCceE----ecC-cc
Confidence 566787665543 356899999999866421000 0 0012245678899999999999999874321 122 44
Q ss_pred HHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 105 LADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 105 ~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
.++|+.++++.+. ..+|.++|||+||.+++.+|..+|..+++++..++...
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 5666666666542 25899999999999999999999999999998887654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-12 Score=116.50 Aligned_cols=229 Identities=12% Similarity=0.134 Sum_probs=133.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF---- 116 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l---- 116 (349)
.+++||+++.+-...+.+...- -.+.+..++++||.|+++|+++-+... ...+++++++.+.+.++..
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P-~~SlVr~lv~qG~~VflIsW~nP~~~~-------r~~~ldDYv~~i~~Ald~V~~~t 285 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSP-EKSFVQYCLKNQLQVFIISWRNPDKAH-------REWGLSTYVDALKEAVDAVRAIT 285 (560)
T ss_pred CCCcEEEechhhhhhheeecCC-cchHHHHHHHcCCeEEEEeCCCCChhh-------cCCCHHHHHHHHHHHHHHHHHhc
Confidence 4578999998864443332111 136778889999999999999975533 3478899988777666544
Q ss_pred CCCcEEEEEechhHHHHHH----HHHhhhc-ccceeEEecCCCCCCChh--HHhhhhhh----hHHHHhcCc-chhHH--
Q 018916 117 GLGAVMCMGVTAGAYILTL----FAMKYRH-RVLGLILVSPLCKAPSWT--EWLYNKVM----SNLLYYYGM-CGVVK-- 182 (349)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~-~~~~~-- 182 (349)
|.+++.++|||+||.+++. +++++++ +|++++++.+........ ........ .......+. .....
T Consensus 286 G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~ 365 (560)
T TIGR01839 286 GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAK 365 (560)
T ss_pred CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHH
Confidence 6789999999999999997 7888886 799999999887654211 11100000 011111111 11000
Q ss_pred --------HHHHHhhcccccccCCCCCCchHHHHHHHHhhhh---ccchhHHHHHHHhcCCCChh-----------hhcc
Q 018916 183 --------ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE---RQSSNVWHFLEAINGRPDIS-----------EGLR 240 (349)
Q Consensus 183 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~l~ 240 (349)
+.+...+... .+..+ .+...+ +..+... .....+..+++.+.. ..+. -.++
T Consensus 366 ~F~~LrP~dliw~y~v~~-yllg~----~p~~fd-ll~Wn~D~t~lPg~~~~e~l~ly~~-N~L~~pG~l~v~G~~idL~ 438 (560)
T TIGR01839 366 VFAWMRPNDLIWNYWVNN-YLLGN----EPPAFD-ILYWNNDTTRLPAAFHGDLLDMFKS-NPLTRPDALEVCGTPIDLK 438 (560)
T ss_pred HHHhcCchhhhHHHHHHH-hhcCC----Ccchhh-HHHHhCcCccchHHHHHHHHHHHhc-CCCCCCCCEEECCEEechh
Confidence 0011111110 10110 111111 2222222 122223333332222 2222 2478
Q ss_pred ccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccc
Q 018916 241 KLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTE 286 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 286 (349)
+|+||++++.|+.|.++ ..+..+.+.+.+ +.+++.. .+||..=+
T Consensus 439 ~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~-~gGHIggi 484 (560)
T TIGR01839 439 KVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLS-NSGHIQSI 484 (560)
T ss_pred cCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEec-CCCccccc
Confidence 99999999999999999 566677777776 5676666 58885443
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.4e-14 Score=120.05 Aligned_cols=115 Identities=12% Similarity=0.143 Sum_probs=80.1
Q ss_pred eEEEEEccCCCCCeEEEecCCCCCh-hhhhcccccchhhh-hhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNY-MSCFQGLFFCPEAC-SLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~-~~~~~~~~~~~~~~-~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
.+.+..+. +.+|++|+|||++.+. .. |...+. .++. .+|+|+++|+++++.+.. . ....+++.+++
T Consensus 26 ~~~~~~f~-~~~p~vilIHG~~~~~~~~------~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y--~--~a~~~~~~v~~ 94 (275)
T cd00707 26 SLKNSNFN-PSRPTRFIIHGWTSSGEES------WISDLRKAYLSRGDYNVIVVDWGRGANPNY--P--QAVNNTRVVGA 94 (275)
T ss_pred hhhhcCCC-CCCCcEEEEcCCCCCCCCc------HHHHHHHHHHhcCCCEEEEEECccccccCh--H--HHHHhHHHHHH
Confidence 34444444 5688999999998876 23 322222 3444 589999999999833221 1 11234555555
Q ss_pred HHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 108 QIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 108 ~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
++..+++.+ +.++++++||||||.+|..++.++|++|.++++++|+.+.
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 555555443 4578999999999999999999999999999999988654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.4e-13 Score=107.56 Aligned_cols=112 Identities=11% Similarity=0.085 Sum_probs=74.7
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCC---C---CCCCCCHHHHHHHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAIS---D---DEPVLSVDDLADQIAEV 112 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~---~---~~~~~~~~~~~~~l~~~ 112 (349)
...|+||++||.+.+...+.....| ..++ +.||.|+++|.+|+|.+..... . ........++.+.+..+
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~----~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGW----KAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAV 86 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcCh----HHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHH
Confidence 3578999999998876654321112 2333 4699999999999975432110 0 00112233333344444
Q ss_pred HHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 113 LNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 113 l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
.+..++ ++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 87 ~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 87 KANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 444444 5899999999999999999999999999988887654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.5e-12 Score=103.75 Aligned_cols=218 Identities=14% Similarity=0.121 Sum_probs=125.4
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCC-eEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-c
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-A 120 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g-~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~ 120 (349)
++|+|+|+.+++... |. .+...+... +.|+.++.+|.+... ....+++++++...+.+.....+ +
T Consensus 1 ~~lf~~p~~gG~~~~-y~------~la~~l~~~~~~v~~i~~~~~~~~~------~~~~si~~la~~y~~~I~~~~~~gp 67 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-YR------PLARALPDDVIGVYGIEYPGRGDDE------PPPDSIEELASRYAEAIRARQPEGP 67 (229)
T ss_dssp -EEEEESSTTCSGGG-GH------HHHHHHTTTEEEEEEECSTTSCTTS------HEESSHHHHHHHHHHHHHHHTSSSS
T ss_pred CeEEEEcCCccCHHH-HH------HHHHhCCCCeEEEEEEecCCCCCCC------CCCCCHHHHHHHHHHHhhhhCCCCC
Confidence 479999999987644 22 225666775 999999999997322 23579999999998888766555 9
Q ss_pred EEEEEechhHHHHHHHHHhhh---cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccC
Q 018916 121 VMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
++|+|||+||.+|.++|.+.. ..+..++++++.................. ..+.+....-......
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~- 136 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQ----------FIEELRRIGGTPDASL- 136 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHH----------HHHHHHHHCHHHHHHC-
T ss_pred eeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHH----------HHHHHHHhcCCchhhh-
Confidence 999999999999999998653 34899999997655321111110000000 0000000000000000
Q ss_pred CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhH----H-HHHHHhcccce
Q 018916 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEA----V-HMTSKIDRRYS 272 (349)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~----~-~~~~~~~~~~~ 272 (349)
..++....+.. .+........... ......-.+|.++.....|+..... . .+.+...+ ..
T Consensus 137 ----~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~-~~ 201 (229)
T PF00975_consen 137 ----EDEELLARLLR--------ALRDDFQALENYS--IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSG-DV 201 (229)
T ss_dssp ----HHHHHHHHHHH--------HHHHHHHHHHTCS---TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSS-SE
T ss_pred ----cCHHHHHHHHH--------HHHHHHHHHhhcc--CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCC-Cc
Confidence 01111111111 1111112222211 0001111567888889999887222 1 23333333 47
Q ss_pred eEEEEcCCCCccccc-ChhhHHHHHHHHH
Q 018916 273 ALVEVQACGSMVTEE-QPHAMLIPMEYFL 300 (349)
Q Consensus 273 ~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 300 (349)
+++.++ ++|+.++. +..++++.|.++|
T Consensus 202 ~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 202 EVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp EEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred EEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 788886 89999997 7778888888876
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.8e-12 Score=111.05 Aligned_cols=232 Identities=12% Similarity=0.038 Sum_probs=117.8
Q ss_pred CCCceeEEeCCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhh-hhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~-~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
...++..|+..+..|....+-+. ..|+||++.|+-+-... +| ... ..+..+|+.++++|+||.|.|...
T Consensus 163 ~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD-----~~-~l~~~~l~~rGiA~LtvDmPG~G~s~~~- 235 (411)
T PF06500_consen 163 YPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQED-----LY-RLFRDYLAPRGIAMLTVDMPGQGESPKW- 235 (411)
T ss_dssp SEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGG-----GH-HHHHCCCHHCT-EEEEE--TTSGGGTTT-
T ss_pred CCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHH-----HH-HHHHHHHHhCCCEEEEEccCCCcccccC-
Confidence 34466777777877765544432 33566666555333222 12 122 245679999999999999987532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
+ -.. +.+.+...+.+.+... +..+|.++|.|+||++|.++|..++++++++|..++....--.....
T Consensus 236 ~-l~~--D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~------- 305 (411)
T PF06500_consen 236 P-LTQ--DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEW------- 305 (411)
T ss_dssp --S-S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHH-------
T ss_pred C-CCc--CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHH-------
Confidence 1 112 2234555555555543 34689999999999999999999889999999999875431110000
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhh--hc--cccCCce
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISE--GL--RKLQCRS 246 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l--~~i~~Pv 246 (349)
.........+.+ ...++. . .. ..+.+...+ .. ..+.. .+ .+..+|+
T Consensus 306 ---~~~~P~my~d~L-A~rlG~-~--------~~-~~~~l~~el---------------~~-~SLk~qGlL~~rr~~~pl 355 (411)
T PF06500_consen 306 ---QQRVPDMYLDVL-ASRLGM-A--------AV-SDESLRGEL---------------NK-FSLKTQGLLSGRRCPTPL 355 (411)
T ss_dssp ---HTTS-HHHHHHH-HHHCT--S--------CE--HHHHHHHG---------------GG-GSTTTTTTTTSS-BSS-E
T ss_pred ---HhcCCHHHHHHH-HHHhCC-c--------cC-CHHHHHHHH---------------Hh-cCcchhccccCCCCCcce
Confidence 011111111111 112221 0 00 011111111 11 12211 23 5678999
Q ss_pred EEEEeCCCccchhHH--HHHHHhcccceeEEEEcCCC-CcccccChhhHHHHHHHHHhh
Q 018916 247 LIFVGESSPFHSEAV--HMTSKIDRRYSALVEVQACG-SMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 247 lii~g~~D~~~~~~~--~~~~~~~~~~~~~~~i~~~g-H~~~~e~p~~~~~~i~~fl~~ 302 (349)
|.+.|++|++++... -++..-. +.+...++... |..+ +.-...+.+||+.
T Consensus 356 L~i~~~~D~v~P~eD~~lia~~s~--~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 356 LAINGEDDPVSPIEDSRLIAESST--DGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp EEEEETT-SSS-HHHHHHHHHTBT--T-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred EEeecCCCCCCCHHHHHHHHhcCC--CCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 999999999984333 3333333 37777777544 4333 3556677788875
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.4e-13 Score=110.66 Aligned_cols=247 Identities=11% Similarity=0.115 Sum_probs=91.4
Q ss_pred eEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l 109 (349)
.+.|..........||||.|++..-.+ .-|.+.+...+ ..+|.|+-+-++... .+....+++.-+++|
T Consensus 22 afe~~~~~~~~~~~llfIGGLtDGl~t----vpY~~~La~aL~~~~wsl~q~~LsSSy-------~G~G~~SL~~D~~eI 90 (303)
T PF08538_consen 22 AFEFTSSSSSAPNALLFIGGLTDGLLT----VPYLPDLAEALEETGWSLFQVQLSSSY-------SGWGTSSLDRDVEEI 90 (303)
T ss_dssp EEEEEEE-TTSSSEEEEE--TT--TT-----STCHHHHHHHHT-TT-EEEEE--GGGB-------TTS-S--HHHHHHHH
T ss_pred EEEecCCCCCCCcEEEEECCCCCCCCC----CchHHHHHHHhccCCeEEEEEEecCcc-------CCcCcchhhhHHHHH
Confidence 333443333356689999998655322 11223334445 469999999887621 122346777777777
Q ss_pred HHHHHHc--------CCCcEEEEEechhHHHHHHHHHhhh-----cccceeEEecCCCCCCChhHHhhh----hhhhHH-
Q 018916 110 AEVLNHF--------GLGAVMCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLCKAPSWTEWLYN----KVMSNL- 171 (349)
Q Consensus 110 ~~~l~~l--------~~~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~----~~~~~~- 171 (349)
.++++.+ +.++|+|+|||.|+.-+++|+.... ..|+++||-+|....+........ ......
T Consensus 91 ~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A 170 (303)
T PF08538_consen 91 AQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALA 170 (303)
T ss_dssp HHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHH
T ss_pred HHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHH
Confidence 7776543 3568999999999999999988653 569999999998876543221111 111111
Q ss_pred ---HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEE
Q 018916 172 ---LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 248 (349)
Q Consensus 172 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 248 (349)
+....-...++.......+ . ..+--..++.........+.+ +........+...+..+++|+|+
T Consensus 171 ~~~i~~g~~~~~lp~~~~~~~~-----~-----~~PiTA~Rf~SL~s~~gdDD~---FSSDL~de~l~~tfG~v~~plLv 237 (303)
T PF08538_consen 171 KELIAEGKGDEILPREFTPLVF-----Y-----DTPITAYRFLSLASPGGDDDY---FSSDLSDERLKKTFGKVSKPLLV 237 (303)
T ss_dssp HHHHHCT-TT-GG----GGTTT-----------SS---HHHHHT-S-SSHHHHT---HHHHHTT-HHHHTGGG--S-EEE
T ss_pred HHHHHcCCCCceeecccccccc-----C-----CCcccHHHHHhccCCCCcccc---cCCCCCHHHHHHHhccCCCceEE
Confidence 1111111111111111110 0 012222333333332222222 22222224556778899999999
Q ss_pred EEeCCCccchh---HHHHHHHhcccc------eeEEEEcCCCCcccccCh----hhHHHHHHHHHh
Q 018916 249 FVGESSPFHSE---AVHMTSKIDRRY------SALVEVQACGSMVTEEQP----HAMLIPMEYFLM 301 (349)
Q Consensus 249 i~g~~D~~~~~---~~~~~~~~~~~~------~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl~ 301 (349)
+.+++|.+++. .+.+.+++...- ..-.+|+|++|.+-.+.. +.+.+.+..||+
T Consensus 238 l~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 238 LYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp EEE--TT-----------------------------------------------------------
T ss_pred EecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 99999999832 223444443311 224588999998876433 246777777774
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.7e-12 Score=108.75 Aligned_cols=143 Identities=13% Similarity=0.117 Sum_probs=101.1
Q ss_pred CCCCCCceeEEeCCCee-E--EEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC
Q 018916 15 TPPPSGKDNLIKTSHGS-L--SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 15 ~~~~~~~~~~i~~~~~~-l--~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
...+..+++.+.|.+|- + +-...+...+|+|++.||+..++..|....--....--+..+||+|+.-+.||.-.|..
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 34456788999996663 2 32333446789999999999999887433212233334557899999999999776654
Q ss_pred CCC------CCCCCCCHHHHH-----HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCC
Q 018916 92 AIS------DDEPVLSVDDLA-----DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAP 157 (349)
Q Consensus 92 ~~~------~~~~~~~~~~~~-----~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~ 157 (349)
... ......++++++ +.|..+++.-+.++++.+|||.|+.+....+...|+ +|+.+++++|.....
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 211 113345666654 445555666677899999999999999988887665 799999999988443
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-11 Score=102.78 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=95.3
Q ss_pred EEeCCCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccchhhhhhhc----------CCeEEEEECCCCCC
Q 018916 24 LIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL----------HNFCIYHINPPGHE 87 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~----------~g~~vi~~D~~G~G 87 (349)
..++.|-++|+....++ .--+++++|||.++-...+.- ..+|. --|.||++.+||+|
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykf-------IPlLT~p~~hg~~~d~~FEVI~PSlPGyg 200 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKF-------IPLLTDPKRHGNESDYAFEVIAPSLPGYG 200 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhh-------hhhhcCccccCCccceeEEEeccCCCCcc
Confidence 45667888888765543 123899999999886553321 23332 24899999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 88 FGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 88 ~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
.|+.+.. ...+....|.-+..++-.+|..++.+-|-.||..|+..+|..+|+.|.|+-+-.+....
T Consensus 201 wSd~~sk---~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s 266 (469)
T KOG2565|consen 201 WSDAPSK---TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNS 266 (469)
T ss_pred cCcCCcc---CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCC
Confidence 9986533 33677888899999999999999999999999999999999999999988776655543
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-11 Score=106.10 Aligned_cols=226 Identities=14% Similarity=0.077 Sum_probs=116.2
Q ss_pred CCeeEEEEEcc----CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCC-CCCCCC------CC
Q 018916 28 SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF-GAAAIS------DD 96 (349)
Q Consensus 28 ~~~~l~~~~~g----~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~-s~~~~~------~~ 96 (349)
+|..++-...- .+.-|+||.+||.+.....+.. ...+..+||.|+.+|.||+|. +..... .+
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~-------~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFD-------LLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHH-------HHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccc-------ccccccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 55555433322 2345799999999887544322 135678899999999999982 221100 00
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH
Q 018916 97 ---------EPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 97 ---------~~~~~~~~~~~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (349)
...+-+..+..|....++.+ +.+++.+.|.|.||.+++.+|+..+ +|++++..-|....- ..
T Consensus 138 ~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~--~~ 214 (320)
T PF05448_consen 138 HITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF--RR 214 (320)
T ss_dssp STTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH--HH
T ss_pred HHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch--hh
Confidence 11122333334444333322 2368999999999999999988875 699999888765431 11
Q ss_pred HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc
Q 018916 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 241 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (349)
.. .. .. ....+ ..+..++...+- ..+..+. .++. ..+.|......+
T Consensus 215 ~~------~~-~~-~~~~y---~~~~~~~~~~d~-------~~~~~~~---------------v~~~-L~Y~D~~nfA~r 260 (320)
T PF05448_consen 215 AL------EL-RA-DEGPY---PEIRRYFRWRDP-------HHEREPE---------------VFET-LSYFDAVNFARR 260 (320)
T ss_dssp HH------HH-T---STTT---HHHHHHHHHHSC-------THCHHHH---------------HHHH-HHTT-HHHHGGG
T ss_pred hh------hc-CC-ccccH---HHHHHHHhccCC-------CcccHHH---------------HHHH-HhhhhHHHHHHH
Confidence 00 00 00 00000 001111110000 0111111 1111 123677777889
Q ss_pred cCCceEEEEeCCCccch--hHHHHHHHhcccceeEEEEcCCCCcccccChhhH-HHHHHHHHhh
Q 018916 242 LQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM-LIPMEYFLMG 302 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~-~~~i~~fl~~ 302 (349)
|+||+++-.|-.|++++ ......+.++. .+++.+++..||.. ..++ .+...+||++
T Consensus 261 i~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~----~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 261 IKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEY----GPEFQEDKQLNFLKE 319 (320)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SST----THHHHHHHHHHHHHH
T ss_pred cCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCc----hhhHHHHHHHHHHhc
Confidence 99999999999999993 33446666765 48999999999944 3444 6777788875
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-11 Score=99.02 Aligned_cols=181 Identities=16% Similarity=0.194 Sum_probs=101.8
Q ss_pred CCCCCeEEEecCCCCChhhhhcccccchhhh-hhhcCCeEEEEECCCC------CCC---CCCC---CCCCC--CCCCHH
Q 018916 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEAC-SLLLHNFCIYHINPPG------HEF---GAAA---ISDDE--PVLSVD 103 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~-~~l~~g~~vi~~D~~G------~G~---s~~~---~~~~~--~~~~~~ 103 (349)
.+..++|||+||+|.+...+.. ... .......+++.++-|. .|. +--+ ..... ....++
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~------~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFAL------LAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHH------HHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCCceEEEEECCCCCCcchhHH------HHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 3567899999999998844211 111 1234567777765442 122 1100 00000 112334
Q ss_pred HHHHHHHHHHHH-----cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc
Q 018916 104 DLADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (349)
Q Consensus 104 ~~~~~l~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
+.++.+.++++. ...+++++.|+|.||++|+.++.++|+.+.+++.+++........
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------ 146 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------ 146 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------
Confidence 444455555542 234689999999999999999999999999999998865431100
Q ss_pred hhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-
Q 018916 179 GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 257 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~- 257 (349)
.. . ..... +.|+++++|++|+++
T Consensus 147 ------------~~-~-----------------------------------------~~~~~--~~pi~~~hG~~D~vvp 170 (216)
T PF02230_consen 147 ------------ED-R-----------------------------------------PEALA--KTPILIIHGDEDPVVP 170 (216)
T ss_dssp ------------HC-C-----------------------------------------HCCCC--TS-EEEEEETT-SSST
T ss_pred ------------cc-c-----------------------------------------ccccC--CCcEEEEecCCCCccc
Confidence 00 0 00001 579999999999998
Q ss_pred -hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 258 -SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 258 -~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+..+...+.+... +++++.++++||.+. .+..+.+.+||++.
T Consensus 171 ~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 171 FEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 4556666666543 389999999999775 45566788888763
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.4e-11 Score=92.48 Aligned_cols=194 Identities=15% Similarity=0.149 Sum_probs=117.8
Q ss_pred eeEEeCCCeeEEE--EEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSV--TIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 22 ~~~i~~~~~~l~~--~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+..++-.-+.+.. .....+..|..|++|--...+.+..+.. -......+.+.||.++.+|+||.|+|..... ...
T Consensus 6 ~v~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkv-v~~la~~l~~~G~atlRfNfRgVG~S~G~fD--~Gi 82 (210)
T COG2945 6 TVIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKV-VQTLARALVKRGFATLRFNFRGVGRSQGEFD--NGI 82 (210)
T ss_pred cEEecCCcccceeccCCCCCCCCceEEecCCCccccCccCCHH-HHHHHHHHHhCCceEEeecccccccccCccc--CCc
Confidence 3444444444433 3333356778888886544443322222 1133345567899999999999999875432 122
Q ss_pred CCHHHHHHHHHHHHHHcCC-Cc-EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 100 LSVDDLADQIAEVLNHFGL-GA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~-~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
-..+|... ..++++.... .+ ..+.|+|+|++|+..+|.+.|+ ....+.+.+......
T Consensus 83 GE~~Da~a-aldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~d------------------- 141 (210)
T COG2945 83 GELEDAAA-ALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYD------------------- 141 (210)
T ss_pred chHHHHHH-HHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchh-------------------
Confidence 23344333 3334443332 22 4689999999999999999876 444443333222100
Q ss_pred chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc
Q 018916 178 CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 257 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 257 (349)
..+ +....+|.++|+|+.|.++
T Consensus 142 ---------fs~-------------------------------------------------l~P~P~~~lvi~g~~Ddvv 163 (210)
T COG2945 142 ---------FSF-------------------------------------------------LAPCPSPGLVIQGDADDVV 163 (210)
T ss_pred ---------hhh-------------------------------------------------ccCCCCCceeEecChhhhh
Confidence 001 1123578999999999887
Q ss_pred h--hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 258 S--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 258 ~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+ ...++.+. ...+++.+++++||.+ .+-+.+.+.|.+||+
T Consensus 164 ~l~~~l~~~~~---~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 164 DLVAVLKWQES---IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred cHHHHHHhhcC---CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 3 33334443 2378999999999877 667889999999995
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-12 Score=118.76 Aligned_cols=111 Identities=12% Similarity=0.013 Sum_probs=79.3
Q ss_pred eEEeCCCeeEEEEEccCC---------CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC-
Q 018916 23 NLIKTSHGSLSVTIYGDQ---------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA- 92 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~---------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~- 92 (349)
+++..++.++.|...|.+ +.|+|||+||++++... |......+..+||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~------~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~ 494 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKEN------ALAFAGTLAAAGVATIAIDHPLHGARSFDA 494 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHH------HHHHHHHHHhCCcEEEEeCCCCCCcccccc
Confidence 344445666666654422 23689999999998865 33444555568999999999999988432
Q ss_pred C-------CCCCC-----------CCCHHHHHHHHHHHHHHcC----------------CCcEEEEEechhHHHHHHHHH
Q 018916 93 I-------SDDEP-----------VLSVDDLADQIAEVLNHFG----------------LGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 93 ~-------~~~~~-----------~~~~~~~~~~l~~~l~~l~----------------~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
. ..... ...++..+.|+..++..++ ..+++++||||||+++..++.
T Consensus 495 ~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 495 NASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred ccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 0 00001 1378999999998887776 358999999999999999987
Q ss_pred h
Q 018916 139 K 139 (349)
Q Consensus 139 ~ 139 (349)
.
T Consensus 575 ~ 575 (792)
T TIGR03502 575 Y 575 (792)
T ss_pred h
Confidence 5
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.4e-11 Score=113.49 Aligned_cols=218 Identities=13% Similarity=0.054 Sum_probs=131.6
Q ss_pred CceeEEeC-CCeeEEE-EEc-----cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 20 GKDNLIKT-SHGSLSV-TIY-----GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 20 ~~~~~i~~-~~~~l~~-~~~-----g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
.++..+.. +|.+|.+ ..+ .++..|+||++||..+.... .. |......++.+||.|+.++.||-|.=...
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~---p~-f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID---AD-FSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC---CC-ccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 34455554 6667765 332 12356999999997655422 12 33445678899999999999997643321
Q ss_pred CC----CCCCCCCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 93 IS----DDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 93 ~~----~~~~~~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
+. ......+++|+.+.+..+++.= ..+++.+.|.|.||+++...+.++|++++++|...|.........
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~----- 566 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML----- 566 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcc-----
Confidence 11 1122367888888877777541 236899999999999999999999999999998887665421100
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc-
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR- 245 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P- 245 (349)
...+..... ....+ +. . .+++..+. +.. .+....+.+++.|
T Consensus 567 -------~~~~p~~~~--~~~e~-G~-p-------~~~~~~~~----------------l~~----~SP~~~v~~~~~P~ 608 (686)
T PRK10115 567 -------DESIPLTTG--EFEEW-GN-P-------QDPQYYEY----------------MKS----YSPYDNVTAQAYPH 608 (686)
T ss_pred -------cCCCCCChh--HHHHh-CC-C-------CCHHHHHH----------------HHH----cCchhccCccCCCc
Confidence 000000000 00001 11 0 01111111 111 1233344567889
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEE---cCCCCcc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEV---QACGSMV 284 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i---~~~gH~~ 284 (349)
+|+++|.+|.-+ ..+.++..++... ..+.+.+ +++||..
T Consensus 609 lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 609 LLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred eeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 567799999988 5666777777642 2566777 8999983
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.7e-11 Score=95.52 Aligned_cols=155 Identities=10% Similarity=0.151 Sum_probs=100.7
Q ss_pred EEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEE
Q 018916 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (349)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lv 124 (349)
|+++||++++...- |.+-....+...++|-..|+ + ..+.+++.+.+.+.+.... ++++||
T Consensus 1 v~IvhG~~~s~~~H-----W~~wl~~~l~~~~~V~~~~~------~--------~P~~~~W~~~l~~~i~~~~-~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDH-----WQPWLERQLENSVRVEQPDW------D--------NPDLDEWVQALDQAIDAID-EPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTS-----THHHHHHHHTTSEEEEEC--------T--------S--HHHHHHHHHHCCHC-T-TTEEEE
T ss_pred CEEeCCCCCCCccH-----HHHHHHHhCCCCeEEecccc------C--------CCCHHHHHHHHHHHHhhcC-CCeEEE
Confidence 68999998886542 44555666666688877776 1 1367888888887777654 679999
Q ss_pred EechhHHHHHHHH-HhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCc
Q 018916 125 GVTAGAYILTLFA-MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPE 203 (349)
Q Consensus 125 GhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
|||+|+..++.++ .....+|.+++|++|+..... . ..... ...|..
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~-~---------------~~~~~------~~~f~~----------- 107 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP-E---------------PFPPE------LDGFTP----------- 107 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH-H---------------CCTCG------GCCCTT-----------
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc-c---------------chhhh------cccccc-----------
Confidence 9999999999999 777789999999999754300 0 00000 000000
Q ss_pred hHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCC
Q 018916 204 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACG 281 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~g 281 (349)
.....+.+|.++|.+++|+++ +.++++++.+. ++++.++++|
T Consensus 108 ---------------------------------~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~---a~~~~~~~~G 151 (171)
T PF06821_consen 108 ---------------------------------LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG---AELIILGGGG 151 (171)
T ss_dssp ---------------------------------SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEETS-T
T ss_pred ---------------------------------CcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC---CCeEECCCCC
Confidence 001123467799999999999 67778899887 7999999999
Q ss_pred CcccccC
Q 018916 282 SMVTEEQ 288 (349)
Q Consensus 282 H~~~~e~ 288 (349)
|+.-.+.
T Consensus 152 Hf~~~~G 158 (171)
T PF06821_consen 152 HFNAASG 158 (171)
T ss_dssp TSSGGGT
T ss_pred CcccccC
Confidence 9876543
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=101.61 Aligned_cols=179 Identities=16% Similarity=0.156 Sum_probs=103.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC--------CHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL--------SVDDLADQIAEV 112 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~--------~~~~~~~~l~~~ 112 (349)
..|.||++|++.+-. .+. ......+.++||.|+++|+-+-...... ....... ..+...+++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~-~~~-----~~~ad~lA~~Gy~v~~pD~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa 85 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLN-PNI-----RDLADRLAEEGYVVLAPDLFGGRGAPPS-DPEEAFAAMRELFAPRPEQVAADLQAA 85 (218)
T ss_dssp SEEEEEEE-BTTBS--HHH-----HHHHHHHHHTT-EEEEE-CCCCTS--CC-CHHCHHHHHHHCHHHSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCc-hHH-----HHHHHHHHhcCCCEEecccccCCCCCcc-chhhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 468999999986543 111 1334566788999999998664320110 0000000 133455666555
Q ss_pred HHHcC------CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHH
Q 018916 113 LNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (349)
Q Consensus 113 l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
++.+. .+++.++|+|+||.+++.+|.+. ..+++.+..-+....
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------ 134 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------ 134 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG------------------------------
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC------------------------------
Confidence 54442 35799999999999999998887 568888765550000
Q ss_pred HhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHH
Q 018916 187 KRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 264 (349)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~ 264 (349)
........++++|+++++|++|+.+ +..+.+.
T Consensus 135 ----------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 135 ----------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALE 168 (218)
T ss_dssp ----------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHH
T ss_pred ----------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHH
Confidence 0011123456799999999999998 3455677
Q ss_pred HHhcc--cceeEEEEcCCCCcccccChh--------hHHHHHHHHHhhc
Q 018916 265 SKIDR--RYSALVEVQACGSMVTEEQPH--------AMLIPMEYFLMGY 303 (349)
Q Consensus 265 ~~~~~--~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~fl~~~ 303 (349)
+.+.. ...+++.++|++|..+....+ +-.+.+.+||++.
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 76632 348999999999977764322 3345566777653
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.36 E-value=4e-11 Score=94.36 Aligned_cols=183 Identities=13% Similarity=0.139 Sum_probs=106.6
Q ss_pred EEEecCCCCChhhhhcccccchhhhhhhcC---CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLH---NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~---g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
|+++||+.++..+.-.. .+...+++ ...++++|++- ..++..+.+.++++....+.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~-----~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~ 61 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQ-----ALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENV 61 (187)
T ss_pred eEEecCCCCCCCCHHHH-----HHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCe
Confidence 79999998876553111 11222322 34556666543 345666778888888877779
Q ss_pred EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCC
Q 018916 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQV 201 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
.|+|.||||+.|..+|.+++ +++ ||++|+...... +..+++....... .
T Consensus 62 ~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~--------------------------l~~~iG~~~~~~~--~ 110 (187)
T PF05728_consen 62 VLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYEL--------------------------LQDYIGEQTNPYT--G 110 (187)
T ss_pred EEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHH--------------------------HHHhhCccccCCC--C
Confidence 99999999999999999885 444 889998765321 1111121000000 0
Q ss_pred CchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCC
Q 018916 202 PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACG 281 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 281 (349)
..-.+..... ...+. +......-..+++++.++.|.+++. ++..+...+ ...++.+|++
T Consensus 111 e~~~~~~~~~------------~~l~~------l~~~~~~~~~~~lvll~~~DEvLd~-~~a~~~~~~--~~~~i~~ggd 169 (187)
T PF05728_consen 111 ESYELTEEHI------------EELKA------LEVPYPTNPERYLVLLQTGDEVLDY-REAVAKYRG--CAQIIEEGGD 169 (187)
T ss_pred ccceechHhh------------hhcce------EeccccCCCccEEEEEecCCcccCH-HHHHHHhcC--ceEEEEeCCC
Confidence 0000000000 00000 0000122356899999999999855 444555555 5566667899
Q ss_pred CcccccChhhHHHHHHHHHh
Q 018916 282 SMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 282 H~~~~e~p~~~~~~i~~fl~ 301 (349)
|-+ ++-++....|.+|+.
T Consensus 170 H~f--~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 170 HSF--QDFEEYLPQIIAFLQ 187 (187)
T ss_pred CCC--ccHHHHHHHHHHhhC
Confidence 954 356777788888863
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.2e-11 Score=94.08 Aligned_cols=224 Identities=11% Similarity=0.084 Sum_probs=131.9
Q ss_pred CCeeEEEEEcc----CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC--CCCC----
Q 018916 28 SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SDDE---- 97 (349)
Q Consensus 28 ~~~~l~~~~~g----~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~--~~~~---- 97 (349)
+|.+|+-+..- .+..|.||-.||.++++..|...+ .+...||.|+.+|.||.|.|..+. +...
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-------~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-------HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-------cccccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 66677654332 245689999999998875543333 445779999999999999774311 1111
Q ss_pred -----------CCC----CHHHHHHHHHHHH--HHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh
Q 018916 98 -----------PVL----SVDDLADQIAEVL--NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (349)
Q Consensus 98 -----------~~~----~~~~~~~~l~~~l--~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (349)
..| -+.|.+..+..++ .....+++.+.|.|.||.|++..++..| ++++++.+-|....-.
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~-- 214 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFP-- 214 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccch--
Confidence 111 1234444433333 2334578999999999999998888775 6998888777654321
Q ss_pred HHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcc
Q 018916 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240 (349)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (349)
.+. .. ..... -.-+..++.. . .+. ...+ +..+ ++.|......
T Consensus 215 r~i------~~----~~~~~--ydei~~y~k~-h--------~~~-e~~v---------------~~TL-~yfD~~n~A~ 256 (321)
T COG3458 215 RAI------EL----ATEGP--YDEIQTYFKR-H--------DPK-EAEV---------------FETL-SYFDIVNLAA 256 (321)
T ss_pred hhe------ee----cccCc--HHHHHHHHHh-c--------Cch-HHHH---------------HHHH-hhhhhhhHHH
Confidence 000 00 00000 0011222222 0 000 0011 1111 1245556677
Q ss_pred ccCCceEEEEeCCCccc-h-hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 241 KLQCRSLIFVGESSPFH-S-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~-~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++++|+|+..|--|+++ + ......+++.. ..++.+++.-+|.- -|.-..+.+..|++.+
T Consensus 257 RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~---~p~~~~~~~~~~l~~l 317 (321)
T COG3458 257 RIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEG---GPGFQSRQQVHFLKIL 317 (321)
T ss_pred hhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeecccccc---CcchhHHHHHHHHHhh
Confidence 89999999999999999 3 33346677765 36677777666743 3666666677787764
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-11 Score=99.02 Aligned_cols=194 Identities=14% Similarity=0.123 Sum_probs=106.9
Q ss_pred EEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----cCC
Q 018916 45 LVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-----FGL 118 (349)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~-----l~~ 118 (349)
||++||.+......... + .....++. .|+.|+.+|+|=.. .......++|..+.+..+++. .+.
T Consensus 1 v~~~HGGg~~~g~~~~~--~-~~~~~la~~~g~~v~~~~Yrl~p-------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH--W-PFAARLAAERGFVVVSIDYRLAP-------EAPFPAALEDVKAAYRWLLKNADKLGIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTTH--H-HHHHHHHHHHTSEEEEEE---TT-------TSSTTHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CEEECCcccccCChHHH--H-HHHHHHHhhccEEEEEeeccccc-------cccccccccccccceeeeccccccccccc
Confidence 79999987764332111 2 33345554 79999999999642 222234566666666666665 445
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCC-CC-hhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKA-PS-WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (349)
++++|+|+|.||.+++.++.+..+. ++++++++|.... .. ......... .......
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~----~~~~~~~-------------- 132 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNE----NKDDPFL-------------- 132 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHH----HSTTSSS--------------
T ss_pred cceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccc----ccccccc--------------
Confidence 7899999999999999999865543 8999999996644 11 111100000 0000000
Q ss_pred ccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHHHhcCCCChhh-hccccCCceEEEEeCCCccchhHHHHHHHhccc
Q 018916 193 QEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISE-GLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRR 270 (349)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 270 (349)
.....+.+...... ...... .+ ..... .+.. -.|+++++|+.|.+++....+.+++...
T Consensus 133 ----------~~~~~~~~~~~~~~~~~~~~~--~~------sp~~~~~~~~-~Pp~~i~~g~~D~l~~~~~~~~~~L~~~ 193 (211)
T PF07859_consen 133 ----------PAPKIDWFWKLYLPGSDRDDP--LA------SPLNASDLKG-LPPTLIIHGEDDVLVDDSLRFAEKLKKA 193 (211)
T ss_dssp ----------BHHHHHHHHHHHHSTGGTTST--TT------SGGGSSCCTT-CHEEEEEEETTSTTHHHHHHHHHHHHHT
T ss_pred ----------ccccccccccccccccccccc--cc------cccccccccc-CCCeeeeccccccchHHHHHHHHHHHHC
Confidence 11111111111110 000000 00 00000 1222 2589999999999887777888887754
Q ss_pred c--eeEEEEcCCCCccc
Q 018916 271 Y--SALVEVQACGSMVT 285 (349)
Q Consensus 271 ~--~~~~~i~~~gH~~~ 285 (349)
+ ++++++++.+|...
T Consensus 194 gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 194 GVDVELHVYPGMPHGFF 210 (211)
T ss_dssp T-EEEEEEETTEETTGG
T ss_pred CCCEEEEEECCCeEEee
Confidence 4 78999999999654
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.2e-10 Score=94.62 Aligned_cols=112 Identities=20% Similarity=0.280 Sum_probs=82.6
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHcC--
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SDDEPVLSVDDLADQIAEVLNHFG-- 117 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~--~~~~~~~~~~~~~~~l~~~l~~l~-- 117 (349)
+..+|||+|.++-- .+|..++ ..+...+...+.|+++.+.||-.+.... ......+++++.++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv-~fY~~Fl--~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-EFYEEFL--SALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCCCChH-HHHHHHH--HHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 45789999987663 3343332 2233334579999999999995444320 023567999999988877775542
Q ss_pred ----CCcEEEEEechhHHHHHHHHHhhh---cccceeEEecCCCCC
Q 018916 118 ----LGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKA 156 (349)
Q Consensus 118 ----~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~ 156 (349)
..+++++|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 357999999999999999999999 789999999988743
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-11 Score=95.80 Aligned_cols=222 Identities=10% Similarity=0.011 Sum_probs=117.8
Q ss_pred cchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q 018916 64 FCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA-----DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 64 ~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~-----~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
+.+......++||.|+++|+||.|.|...... ...+.+.|++ ..+..+-+.+...+.+.+|||+||.+.-.+ .
T Consensus 46 YRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~-~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~-~ 123 (281)
T COG4757 46 YRRFAAAAAKAGFEVLTFDYRGIGQSRPASLS-GSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLL-G 123 (281)
T ss_pred hHHHHHHhhccCceEEEEecccccCCCccccc-cCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccc-c
Confidence 44555666788999999999999998754322 2235555554 344444455556789999999999987644 4
Q ss_pred hhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc-CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc
Q 018916 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY-GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER 217 (349)
Q Consensus 139 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (349)
+++ +..+....+.......+..........-.+... .........+...+++- . ....-.......++....
T Consensus 124 ~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~-G-----~d~p~~v~RdW~RwcR~p 196 (281)
T COG4757 124 QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGL-G-----SDLPGTVMRDWARWCRHP 196 (281)
T ss_pred cCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCC-C-----ccCcchHHHHHHHHhcCc
Confidence 444 455555544443322221111100000000000 00000011111222221 0 001122222222222211
Q ss_pred cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcC----CCCcccccCh-h
Q 018916 218 QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA----CGSMVTEEQP-H 290 (349)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~----~gH~~~~e~p-~ 290 (349)
....... ......+....+++|++.+...+|+.+ ...+.+.+...+...+...++. -||+-..-++ |
T Consensus 197 ~y~fddp------~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~E 270 (281)
T COG4757 197 RYYFDDP------AMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFE 270 (281)
T ss_pred cccccCh------hHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchH
Confidence 0000000 001244556788999999999999999 3445588888886666666654 4998888666 7
Q ss_pred hHHHHHHHHH
Q 018916 291 AMLIPMEYFL 300 (349)
Q Consensus 291 ~~~~~i~~fl 300 (349)
.+.+.+.+|+
T Consensus 271 alwk~~L~w~ 280 (281)
T COG4757 271 ALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHhh
Confidence 7777777765
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.32 E-value=8e-12 Score=83.65 Aligned_cols=77 Identities=14% Similarity=0.204 Sum_probs=59.9
Q ss_pred CeeEEEEEccCCC--CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 29 HGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 29 ~~~l~~~~~g~~~--~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
|.+|+++.+.+++ +.+|+++||++.++.. +...+..+.++||.|+++|+||||+|.. ......++++++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~r------y~~~a~~L~~~G~~V~~~D~rGhG~S~g---~rg~~~~~~~~v 71 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGR------YAHLAEFLAEQGYAVFAYDHRGHGRSEG---KRGHIDSFDDYV 71 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHH------HHHHHHHHHhCCCEEEEECCCcCCCCCC---cccccCCHHHHH
Confidence 4578888877654 5699999999877654 2344567788999999999999999983 233457899999
Q ss_pred HHHHHHHH
Q 018916 107 DQIAEVLN 114 (349)
Q Consensus 107 ~~l~~~l~ 114 (349)
+|+..+++
T Consensus 72 ~D~~~~~~ 79 (79)
T PF12146_consen 72 DDLHQFIQ 79 (79)
T ss_pred HHHHHHhC
Confidence 99998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-10 Score=90.87 Aligned_cols=227 Identities=12% Similarity=0.114 Sum_probs=107.2
Q ss_pred eeEEeC-CCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCCC
Q 018916 22 DNLIKT-SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAIS 94 (349)
Q Consensus 22 ~~~i~~-~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~~ 94 (349)
.+.+.. +|..|+++..-|+ ..++||+..|++-.-.. +...+.++..+||+|+.||...| |.|+.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh------~agLA~YL~~NGFhViRyDsl~HvGlSsG--- 74 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDH------FAGLAEYLSANGFHVIRYDSLNHVGLSSG--- 74 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGG------GHHHHHHHHTTT--EEEE---B----------
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHH------HHHHHHHHhhCCeEEEeccccccccCCCC---
Confidence 355665 5567888776543 45799999998655322 22455677889999999999887 77762
Q ss_pred CCCCCCCHHHHHHHHHHHHH---HcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 95 DDEPVLSVDDLADQIAEVLN---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
.-..+++....+++..+++ ..|..++-|+.-|+.|-+|+..|.+- .+.-+|..-+..............
T Consensus 75 -~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~----- 146 (294)
T PF02273_consen 75 -DINEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGY----- 146 (294)
T ss_dssp -------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-----
T ss_pred -ChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhcc-----
Confidence 3346888888888776664 55788899999999999999999854 366666655444332111111000
Q ss_pred HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEe
Q 018916 172 LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 251 (349)
.+.... ....-...++.+ ..... +.+.....+..-..+ ......+.++++|++.+++
T Consensus 147 ----Dyl~~~----i~~lp~dldfeG--h~l~~---~vFv~dc~e~~w~~l----------~ST~~~~k~l~iP~iaF~A 203 (294)
T PF02273_consen 147 ----DYLQLP----IEQLPEDLDFEG--HNLGA---EVFVTDCFEHGWDDL----------DSTINDMKRLSIPFIAFTA 203 (294)
T ss_dssp -----GGGS-----GGG--SEEEETT--EEEEH---HHHHHHHHHTT-SSH----------HHHHHHHTT--S-EEEEEE
T ss_pred ----chhhcc----hhhCCCcccccc--cccch---HHHHHHHHHcCCccc----------hhHHHHHhhCCCCEEEEEe
Confidence 000000 000000000000 00000 001111110111111 1123456678999999999
Q ss_pred CCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccCh
Q 018916 252 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP 289 (349)
Q Consensus 252 ~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 289 (349)
++|.++ ....++.+.+.....++..++|++|.+- |++
T Consensus 204 ~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 204 NDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp TT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred CCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 999999 5666777777776689999999999765 444
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.2e-10 Score=92.67 Aligned_cols=199 Identities=11% Similarity=0.104 Sum_probs=127.9
Q ss_pred ceeEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISDD 96 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~~~~ 96 (349)
+...+.+.++.+.-+..-+ ...|.||++|++.+-... .......+...||.|+++|+-+. |.+.......
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~------i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~ 76 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPH------IRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEP 76 (236)
T ss_pred cceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCchH------HHHHHHHHHhCCcEEEechhhccCCCCCcccccH
Confidence 3445666666664443332 233899999998655432 22445677788999999999884 3322111000
Q ss_pred --CC-----CCCHHHHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh
Q 018916 97 --EP-----VLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (349)
Q Consensus 97 --~~-----~~~~~~~~~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (349)
.. ..+..+...|+.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 77 ~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~----- 150 (236)
T COG0412 77 AELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD----- 150 (236)
T ss_pred HHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-----
Confidence 00 1223566677777666552 467999999999999999999887 5777775444322110
Q ss_pred hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC
Q 018916 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 243 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (349)
.....+++
T Consensus 151 ------------------------------------------------------------------------~~~~~~~~ 158 (236)
T COG0412 151 ------------------------------------------------------------------------TADAPKIK 158 (236)
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 00023668
Q ss_pred CceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccC-----------hhhHHHHHHHHHhhc
Q 018916 244 CRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQ-----------PHAMLIPMEYFLMGY 303 (349)
Q Consensus 244 ~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~-----------p~~~~~~i~~fl~~~ 303 (349)
+|+|+++|+.|..+ .....+.+.+... ..++.+++++.|..+.+. .+.-.+.+.+|+++.
T Consensus 159 ~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 159 VPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999998 3445566666654 488999999999777542 123456677787765
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-11 Score=94.77 Aligned_cols=176 Identities=17% Similarity=0.172 Sum_probs=109.8
Q ss_pred CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCCCCCCCCCCCCCC-------CHHHHHHHH
Q 018916 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDEPVL-------SVDDLADQI 109 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~~~~~~~~~~~-------~~~~~~~~l 109 (349)
++..|+||++||+|++...... + ......++.++.+.=+- .|.-.-..-.+...+ ..+.+++.+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~-~------~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVP-L------PELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhh-h------hhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 4567789999999988765322 1 23334445555442111 110000000011122 333445555
Q ss_pred HHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHH
Q 018916 110 AEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (349)
Q Consensus 110 ~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
..+.+.+++ ++++++|+|-||.+++.+..++|+.++++++.++.......
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------- 139 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------- 139 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------
Confidence 555666676 78999999999999999999999999999988886654320
Q ss_pred hhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHH
Q 018916 188 RYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 265 (349)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~ 265 (349)
..+ ..-..|+++++|+.|+++ ..+.++.+
T Consensus 140 --~~~-----------------------------------------------~~~~~pill~hG~~Dpvvp~~~~~~l~~ 170 (207)
T COG0400 140 --LLP-----------------------------------------------DLAGTPILLSHGTEDPVVPLALAEALAE 170 (207)
T ss_pred --ccc-----------------------------------------------ccCCCeEEEeccCcCCccCHHHHHHHHH
Confidence 000 011469999999999998 45555555
Q ss_pred Hhcc--cceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 266 KIDR--RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 266 ~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.. .+++...++ +||.+. .+-.+.+.+|+...
T Consensus 171 ~l~~~g~~v~~~~~~-~GH~i~----~e~~~~~~~wl~~~ 205 (207)
T COG0400 171 YLTASGADVEVRWHE-GGHEIP----PEELEAARSWLANT 205 (207)
T ss_pred HHHHcCCCEEEEEec-CCCcCC----HHHHHHHHHHHHhc
Confidence 5543 247888887 999775 34455666677653
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.3e-10 Score=95.66 Aligned_cols=239 Identities=15% Similarity=0.169 Sum_probs=137.3
Q ss_pred CCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhhhhh-hcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~-l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
....+.++.+-+ ...|.|||+||.|.--.+..... ++.....+ .+.+..|+.+|+|=- ++...+.
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~-y~~~~~~~a~~~~~vvvSVdYRLA-------PEh~~Pa 141 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPA-YDSFCTRLAAELNCVVVSVDYRLA-------PEHPFPA 141 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCch-hHHHHHHHHHHcCeEEEecCcccC-------CCCCCCc
Confidence 444566665543 25689999999876544322222 22222333 345889999999976 2333446
Q ss_pred CHHHHHHHHHHHHHH------cCCCcEEEEEechhHHHHHHHHHhhh------cccceeEEecCCCCCCChhHHhhhhhh
Q 018916 101 SVDDLADQIAEVLNH------FGLGAVMCMGVTAGAYILTLFAMKYR------HRVLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
.++|-.+.+..+.++ .+.++|+|+|-|.||.||..+|.+.- -++++.|++-|............+...
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~ 221 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNL 221 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhh
Confidence 777777777666653 34578999999999999999887543 468999999999876543322111100
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc-eE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SL 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl 247 (349)
... ........+.+.. .+.+... . ..+. ..++.... .......-..+| ++
T Consensus 222 ~~~---~~~~~~~~~~~w~-~~lP~~~-------~--------------~~~~--p~~np~~~--~~~~d~~~~~lp~tl 272 (336)
T KOG1515|consen 222 NGS---PELARPKIDKWWR-LLLPNGK-------T--------------DLDH--PFINPVGN--SLAKDLSGLGLPPTL 272 (336)
T ss_pred cCC---cchhHHHHHHHHH-HhCCCCC-------C--------------CcCC--cccccccc--ccccCccccCCCceE
Confidence 000 0000000011111 1111010 0 0000 00000000 111122233444 99
Q ss_pred EEEeCCCccchhHHHHHHHhcccc--eeEEEEcCCCCcccccCh-----hhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTEEQP-----HAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 303 (349)
++.++.|.+.+....+.+++...+ +++.+++++.|..+.-.+ .++.+.+.+|+++.
T Consensus 273 v~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 273 VVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999887778888887655 556678999997777444 35677888888764
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.23 E-value=6e-10 Score=94.12 Aligned_cols=238 Identities=12% Similarity=0.088 Sum_probs=128.7
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH----------HHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA----------DQI 109 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~----------~~l 109 (349)
+.+|.+|.++|.|.++.- .... -....++++|+..+.+..|-||.-.+.........+..|+. ..+
T Consensus 90 ~~rp~~IhLagTGDh~f~-rR~~---l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFW-RRRR---LMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CCCceEEEecCCCccchh-hhhh---hhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 357899999998887622 1111 12567888899999999999986543222222223333332 233
Q ss_pred HHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH-HHHhcCcchh-HHHHHHH
Q 018916 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN-LLYYYGMCGV-VKELLLK 187 (349)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~ 187 (349)
..+++.-|..++.+.|.||||..|...|..+|..+..+-.+++......+..-........ .+... +... ..+. ..
T Consensus 166 l~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q-~~~~~~~~~-~~ 243 (348)
T PF09752_consen 166 LHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQ-FEDTVYEEE-IS 243 (348)
T ss_pred HHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHH-hcccchhhh-hc
Confidence 4445555889999999999999999999999988777767766554332222111110000 00000 0000 0000 00
Q ss_pred hhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC-----CceEEEEeCCCccc--hhH
Q 018916 188 RYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ-----CRSLIFVGESSPFH--SEA 260 (349)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-----~Pvlii~g~~D~~~--~~~ 260 (349)
.... .. .. ......-............... .+....+.+.. --++++.+++|.++ ...
T Consensus 244 -~~~~-~~-------~~---~~~~~~~~~~~~~Ea~~~m~~~---md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v 308 (348)
T PF09752_consen 244 -DIPA-QN-------KS---LPLDSMEERRRDREALRFMRGV---MDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGV 308 (348)
T ss_pred -cccc-Cc-------cc---ccchhhccccchHHHHHHHHHH---HHhhccccccCCCCCCCcEEEEEecCceEechhhc
Confidence 0000 00 00 0000000000001111111111 01111122222 23788999999999 466
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccc-cChhhHHHHHHHHHh
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLM 301 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 301 (349)
..+.+.+++ +++..++ +||..-+ -+.+.+.++|.+=++
T Consensus 309 ~~Lq~~WPG--sEvR~l~-gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 309 LSLQEIWPG--SEVRYLP-GGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred chHHHhCCC--CeEEEec-CCcEEEeeechHHHHHHHHHHhh
Confidence 689999998 9999997 5996554 677888888877554
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.2e-10 Score=106.47 Aligned_cols=215 Identities=11% Similarity=0.053 Sum_probs=116.8
Q ss_pred hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--------------------CCcEEEEEech
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG--------------------LGAVMCMGVTA 128 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~--------------------~~~v~lvGhS~ 128 (349)
..++.+||.|+.+|.||+|.|+... ..+. .+-.+|..++++.+. ..+|.++|.|+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~----~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCP----TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcC----ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 5677889999999999999987421 1122 333445555555443 36899999999
Q ss_pred hHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc----hhHHHHHHHhhcccccccCCCCCCch
Q 018916 129 GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC----GVVKELLLKRYFSKQEVRGNAQVPES 204 (349)
Q Consensus 129 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (349)
||.+++.+|...|..++++|.+++..... ......-... ...++. ....+....+......... ..
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~y---d~yr~~G~~~--~~~g~~ged~d~l~~~~~~r~~~~~~~~~-----~~ 417 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWY---DYYRENGLVR--APGGYQGEDLDVLAELTYSRNLLAGDYLR-----HN 417 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHH---HHhhcCCcee--ccCCcCCcchhhHHHHhhhcccCcchhhc-----ch
Confidence 99999999998888899999877664321 1100000000 000100 0011111111100000000 11
Q ss_pred HHHHHHHHhhhh---ccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc--cceeEEEE
Q 018916 205 DIVQACRRLLDE---RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVEV 277 (349)
Q Consensus 205 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~--~~~~~~~i 277 (349)
+..+.+...+.. .....+..+ ....+....+.++++|+|+|+|.+|..+ ..+.++.+.+.. ...++...
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~y~~f----W~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~ 493 (767)
T PRK05371 418 EACEKLLAELTAAQDRKTGDYNDF----WDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH 493 (767)
T ss_pred HHHHHHHhhhhhhhhhcCCCccHH----HHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe
Confidence 111111110000 000001111 1123455677899999999999999998 356677777753 22556544
Q ss_pred cCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 278 QACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 278 ~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
.++|.... ..+.++.+.+.+|+++.
T Consensus 494 -~g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 494 -QGGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred -CCCccCCCchhHHHHHHHHHHHHHhc
Confidence 57885443 34566777777887654
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.8e-10 Score=95.50 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=81.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA-----DQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~-----~~l~~~l~~ 115 (349)
.+++++++|-+-.....+.... -.+.+..++++|+.|+.+|+++=..+.. ..++++++ +.+..+.+.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~-~~s~V~~l~~~g~~vfvIsw~nPd~~~~-------~~~~edYi~e~l~~aid~v~~i 177 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSP-EKSLVRWLLEQGLDVFVISWRNPDASLA-------AKNLEDYILEGLSEAIDTVKDI 177 (445)
T ss_pred CCCceEeeccccCceeEEeCCC-CccHHHHHHHcCCceEEEeccCchHhhh-------hccHHHHHHHHHHHHHHHHHHH
Confidence 4568999988765544432222 2356777889999999999998755442 24555555 555666677
Q ss_pred cCCCcEEEEEechhHHHHHHHHHhhhcc-cceeEEecCCCCCC
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAP 157 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~ 157 (349)
.+.++|.++|+|.||+++..+++.++.+ |++++++.+.....
T Consensus 178 tg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 178 TGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred hCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 7889999999999999999999988887 99999998877643
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.7e-10 Score=115.83 Aligned_cols=101 Identities=19% Similarity=0.185 Sum_probs=81.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (349)
++++++|+||+++++.. |... ...+..+++|+++|++|+|.+. ...++++++++++.+.++.+.. .
T Consensus 1067 ~~~~l~~lh~~~g~~~~------~~~l-~~~l~~~~~v~~~~~~g~~~~~------~~~~~l~~la~~~~~~i~~~~~~~ 1133 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQ------FSVL-SRYLDPQWSIYGIQSPRPDGPM------QTATSLDEVCEAHLATLLEQQPHG 1133 (1296)
T ss_pred CCCCeEEecCCCCchHH------HHHH-HHhcCCCCcEEEEECCCCCCCC------CCCCCHHHHHHHHHHHHHhhCCCC
Confidence 45789999999988754 3222 4566778999999999997542 2347999999999999987654 5
Q ss_pred cEEEEEechhHHHHHHHHHh---hhcccceeEEecCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLC 154 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 154 (349)
+++++||||||.+|.++|.+ .++++..++++++..
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 89999999999999999986 467899999998754
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-09 Score=79.11 Aligned_cols=184 Identities=12% Similarity=0.074 Sum_probs=120.8
Q ss_pred eEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFG--AAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s--~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
+||+-||.|.+-.+.+. ......+..+|+.|..++++-.-.- ....++.....-..++...+.++...+...+.
T Consensus 16 tilLaHGAGasmdSt~m----~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpL 91 (213)
T COG3571 16 TILLAHGAGASMDSTSM----TAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPL 91 (213)
T ss_pred EEEEecCCCCCCCCHHH----HHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCce
Confidence 78888999877544322 1233556678999999998765311 11112222233446777788888888777899
Q ss_pred EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCC
Q 018916 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQV 201 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
++-|+||||-++..++..--..|+++++++-++..++..+
T Consensus 92 i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe---------------------------------------- 131 (213)
T COG3571 92 IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE---------------------------------------- 131 (213)
T ss_pred eeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc----------------------------------------
Confidence 9999999999999998876566999998876555432100
Q ss_pred CchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCC
Q 018916 202 PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACG 281 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 281 (349)
.-..+.+..++.|++|.+|+.|.+-. -.+.....-....++++++++.
T Consensus 132 -------------------------------~~Rt~HL~gl~tPtli~qGtrD~fGt-r~~Va~y~ls~~iev~wl~~ad 179 (213)
T COG3571 132 -------------------------------QLRTEHLTGLKTPTLITQGTRDEFGT-RDEVAGYALSDPIEVVWLEDAD 179 (213)
T ss_pred -------------------------------cchhhhccCCCCCeEEeecccccccC-HHHHHhhhcCCceEEEEeccCc
Confidence 00112345678999999999999971 1122333333348999999999
Q ss_pred Cccccc----------ChhhHHHHHHHHHhhc
Q 018916 282 SMVTEE----------QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 282 H~~~~e----------~p~~~~~~i~~fl~~~ 303 (349)
|.+--. +-...++.|..|+.++
T Consensus 180 HDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 180 HDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 965321 1234567777787765
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.1e-09 Score=94.82 Aligned_cols=125 Identities=11% Similarity=0.122 Sum_probs=81.8
Q ss_pred CeeEEEEEccC----CCCCeEEEecCCCCChhhh--hc---ccccch------hhhhhhcCCeEEEEECCC-CCCCCCCC
Q 018916 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSC--FQ---GLFFCP------EACSLLLHNFCIYHINPP-GHEFGAAA 92 (349)
Q Consensus 29 ~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~--~~---~~~~~~------~~~~~l~~g~~vi~~D~~-G~G~s~~~ 92 (349)
+..+.|..+.. .+.|+||.++|.++.+... +. ++.... .-.....+..+++.+|.| |+|.|...
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~ 139 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYAD 139 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCC
Confidence 35677766552 4679999999987776443 10 000000 001112346789999975 88888653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH-------cCCCcEEEEEechhHHHHHHHHHhhh----------cccceeEEecCCCC
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKYR----------HRVLGLILVSPLCK 155 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p----------~~v~~lvl~~~~~~ 155 (349)
.. ....+.++.++|+.++++. ++..+++|+|||+||.++..+|.+.- -.++++++-++...
T Consensus 140 ~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 140 KA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred CC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 22 2235668888888888863 34578999999999999988887531 23788888887664
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.9e-10 Score=90.39 Aligned_cols=110 Identities=10% Similarity=0.028 Sum_probs=69.0
Q ss_pred CCCeEEEecCCCCChhhhhc--ccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQ--GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD----QIAEVLN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~--~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~----~l~~~l~ 114 (349)
++.+||||||.+++...+.. ...+...........++++++|+......- ....+.+.++ .+..+++
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~-------~g~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF-------HGRTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc-------ccccHHHHHHHHHHHHHHHHH
Confidence 57799999999888654211 000000001122346899999988763211 1123333333 3444444
Q ss_pred Hc-----CCCcEEEEEechhHHHHHHHHHhhh---cccceeEEecCCCCCC
Q 018916 115 HF-----GLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAP 157 (349)
Q Consensus 115 ~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 157 (349)
.+ +.+++++|||||||.+|..++...+ +.|+.+|.++++....
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 44 4578999999999999998776543 4799999999887654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-09 Score=91.07 Aligned_cols=124 Identities=10% Similarity=0.040 Sum_probs=75.2
Q ss_pred CCeeEEEEEccC-----CCCCeEEEecCCCCCh-hhhhccccc---chhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNY-MSCFQGLFF---CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vv~lHG~~~~~-~~~~~~~~~---~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+|.+|...++-| ..-|+||..|+++.+. ......... ......+.++||.|+.+|.||+|.|+-...
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~---- 76 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFD---- 76 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-----
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccc----
Confidence 355665554433 3457899999987542 111111101 000112789999999999999999874321
Q ss_pred CCCHHHHHHHHHHHHHHc---CC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 99 VLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
....+-++|..++++.+ .. .+|.++|.|++|..++..|+..|..+++++...+....
T Consensus 77 -~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 77 -PMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp -TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred -cCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 21344455555555443 22 57999999999999999999888889999988776543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.1e-09 Score=90.46 Aligned_cols=202 Identities=14% Similarity=0.033 Sum_probs=115.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FG 117 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~---l~ 117 (349)
..|+||++||.+.....-... +..........|+.|+.+|+|-.-+ ......++|..+.+..+.++ ++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~--~~~~~~~~~~~g~~vv~vdYrlaPe-------~~~p~~~~d~~~a~~~l~~~~~~~g 148 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTH--DALVARLAAAAGAVVVSVDYRLAPE-------HPFPAALEDAYAAYRWLRANAAELG 148 (312)
T ss_pred CCcEEEEEeCCeeeecChhhh--HHHHHHHHHHcCCEEEecCCCCCCC-------CCCCchHHHHHHHHHHHHhhhHhhC
Confidence 478999999987664332111 1122234446799999999998722 22345677755555555543 33
Q ss_pred --CCcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcc
Q 018916 118 --LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (349)
Q Consensus 118 --~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (349)
.+++.++|+|.||.+++.++..-.+ .....+++.|...... ..... ...+......
T Consensus 149 ~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~--------~~~~~~~~~~--------- 210 (312)
T COG0657 149 IDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL--------PGYGEADLLD--------- 210 (312)
T ss_pred CCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch--------hhcCCccccC---------
Confidence 4789999999999999999887654 4688899999876543 10000 0000000000
Q ss_pred cccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccc
Q 018916 192 KQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRY 271 (349)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~ 271 (349)
.......+...+............. .-..+.+.. -.|+++++|+.|.+.++...+.+++...+
T Consensus 211 -----------~~~~~~~~~~~~~~~~~~~~~p~~s-----pl~~~~~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~ag 273 (312)
T COG0657 211 -----------AAAILAWFADLYLGAAPDREDPEAS-----PLASDDLSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAG 273 (312)
T ss_pred -----------HHHHHHHHHHHhCcCccccCCCccC-----ccccccccC-CCCEEEEecCCCcchhHHHHHHHHHHHcC
Confidence 0111111111111000000000000 000011333 46899999999999988888888887644
Q ss_pred --eeEEEEcCCCCcccc
Q 018916 272 --SALVEVQACGSMVTE 286 (349)
Q Consensus 272 --~~~~~i~~~gH~~~~ 286 (349)
+++..+++..|....
T Consensus 274 v~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 274 VPVELRVYPGMIHGFDL 290 (312)
T ss_pred CeEEEEEeCCcceeccc
Confidence 678999999995544
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-08 Score=83.32 Aligned_cols=100 Identities=20% Similarity=0.309 Sum_probs=78.8
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CCcE
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LGAV 121 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~v 121 (349)
|+++++|+.++.... |..+ ...+.....|+..+.||.|... ....+++++++...+.|.... ..++
T Consensus 1 ~pLF~fhp~~G~~~~------~~~L-~~~l~~~~~v~~l~a~g~~~~~------~~~~~l~~~a~~yv~~Ir~~QP~GPy 67 (257)
T COG3319 1 PPLFCFHPAGGSVLA------YAPL-AAALGPLLPVYGLQAPGYGAGE------QPFASLDDMAAAYVAAIRRVQPEGPY 67 (257)
T ss_pred CCEEEEcCCCCcHHH------HHHH-HHHhccCceeeccccCcccccc------cccCCHHHHHHHHHHHHHHhCCCCCE
Confidence 579999999888654 2122 3556677999999999997533 234799999998888776654 4789
Q ss_pred EEEEechhHHHHHHHHHhh---hcccceeEEecCCCC
Q 018916 122 MCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCK 155 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 155 (349)
+|+|||+||.+|..+|.+- .+.|..++++++...
T Consensus 68 ~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 68 VLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999999999864 346999999999887
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.9e-09 Score=81.90 Aligned_cols=196 Identities=9% Similarity=0.083 Sum_probs=117.4
Q ss_pred CCeeEEEEEccC-CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 28 SHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 28 ~~~~l~~~~~g~-~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
.++.-.+.++|+ ...+.+|||||.-..-.. ... -...+..++.+||+|..+++ |.+.. ......++.+..
T Consensus 52 ~~g~q~VDIwg~~~~~klfIfIHGGYW~~g~--rk~-clsiv~~a~~~gY~vasvgY---~l~~q---~htL~qt~~~~~ 122 (270)
T KOG4627|consen 52 EGGRQLVDIWGSTNQAKLFIFIHGGYWQEGD--RKM-CLSIVGPAVRRGYRVASVGY---NLCPQ---VHTLEQTMTQFT 122 (270)
T ss_pred CCCceEEEEecCCCCccEEEEEecchhhcCc--hhc-ccchhhhhhhcCeEEEEecc---CcCcc---cccHHHHHHHHH
Confidence 455666777884 467899999996322111 111 11445677789999999865 33331 111223445555
Q ss_pred HHHHHHHHHcC-CCcEEEEEechhHHHHHHHHHh-hhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHH
Q 018916 107 DQIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (349)
Q Consensus 107 ~~l~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
+.+.-+++... .+.+.+-|||.|+.+|.....+ +..+|.++++.++......... ..
T Consensus 123 ~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~-------------te-------- 181 (270)
T KOG4627|consen 123 HGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN-------------TE-------- 181 (270)
T ss_pred HHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC-------------Cc--------
Confidence 55555555554 3557788999999999987665 3346888877666443211000 00
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHH
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 262 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~ 262 (349)
... ++.. ..+..+.. ......+..+++|++++.|++|.-- +..+.
T Consensus 182 -----~g~-dlgL-----t~~~ae~~----------------------Scdl~~~~~v~~~ilVv~~~~espklieQnrd 228 (270)
T KOG4627|consen 182 -----SGN-DLGL-----TERNAESV----------------------SCDLWEYTDVTVWILVVAAEHESPKLIEQNRD 228 (270)
T ss_pred -----ccc-ccCc-----ccchhhhc----------------------CccHHHhcCceeeeeEeeecccCcHHHHhhhh
Confidence 000 0000 00000000 1112234567889999999999544 78888
Q ss_pred HHHHhcccceeEEEEcCCCCcccccC
Q 018916 263 MTSKIDRRYSALVEVQACGSMVTEEQ 288 (349)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~gH~~~~e~ 288 (349)
+.+.+.. +++..+++.+|+-.+++
T Consensus 229 f~~q~~~--a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 229 FADQLRK--ASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HHHHhhh--cceeecCCcchhhHHHH
Confidence 9999887 99999999999877754
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-08 Score=75.69 Aligned_cols=171 Identities=18% Similarity=0.174 Sum_probs=111.1
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEE
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVM 122 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~ 122 (349)
+.+|++||+..++..-++.. | ...+. .+-.+++ .+......+++++.+.+.+... -++++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~-w----e~~l~---~a~rveq-----------~~w~~P~~~dWi~~l~~~v~a~-~~~~v 62 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSR-W----ESALP---NARRVEQ-----------DDWEAPVLDDWIARLEKEVNAA-EGPVV 62 (181)
T ss_pred ceEEEecCCCCCChhHHHHH-H----HhhCc---cchhccc-----------CCCCCCCHHHHHHHHHHHHhcc-CCCeE
Confidence 56899999988875533332 2 11111 1222222 1223357899998888888776 46799
Q ss_pred EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCC
Q 018916 123 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202 (349)
Q Consensus 123 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (349)
||+||+|+..++.++.+....|.|++|++|+-........ ....-|.+
T Consensus 63 lVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~----------------------~~~~tf~~---------- 110 (181)
T COG3545 63 LVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP----------------------KHLMTFDP---------- 110 (181)
T ss_pred EEEecccHHHHHHHHHhhhhccceEEEecCCCccccccch----------------------hhccccCC----------
Confidence 9999999999999999887799999999997654220000 00000111
Q ss_pred chHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCC
Q 018916 203 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQAC 280 (349)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~ 280 (349)
. ...++.-|.+++...+|+++ +.++.+++.+. ..++.+.++
T Consensus 111 -------------------------------~---p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg---s~lv~~g~~ 153 (181)
T COG3545 111 -------------------------------I---PREPLPFPSVVVASRNDPYVSYEHAEDLANAWG---SALVDVGEG 153 (181)
T ss_pred -------------------------------C---ccccCCCceeEEEecCCCCCCHHHHHHHHHhcc---Hhheecccc
Confidence 0 01123458999999999999 67777888888 578888889
Q ss_pred CCccccc---ChhhHHHHHHHHHhh
Q 018916 281 GSMVTEE---QPHAMLIPMEYFLMG 302 (349)
Q Consensus 281 gH~~~~e---~p~~~~~~i~~fl~~ 302 (349)
||+--.+ .-.+....+.+|+.+
T Consensus 154 GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 154 GHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cccchhhcCCCcHHHHHHHHHHhhh
Confidence 9965432 334555666666554
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-08 Score=82.43 Aligned_cols=168 Identities=15% Similarity=0.183 Sum_probs=84.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEECCCCC-----CCCCC------------C---CCC----
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGH-----EFGAA------------A---ISD---- 95 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~-----G~s~~------------~---~~~---- 95 (349)
.++-||+|||++.++...-... ..+...+.+ ++.++.+|-|-- |.... + +-.
T Consensus 3 ~k~riLcLHG~~~na~if~~q~---~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQT---SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHT---HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHHHHHHHH---HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 4678999999999986642222 334555666 899988885432 11100 0 000
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc--------ccceeEEecCCCCCCChhHHhhhhh
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
......+++..+.+.++++..|. -..|+|+|.||.+|..++..... .++.+|++++.......
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred cccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 01124466666677777766552 35699999999999988864321 25566666554332100
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceE
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 247 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 247 (349)
+ .+.. .-..|++|+|
T Consensus 151 -------------------------------------------------------------~---~~~~-~~~~i~iPtl 165 (212)
T PF03959_consen 151 -------------------------------------------------------------Y---QELY-DEPKISIPTL 165 (212)
T ss_dssp -------------------------------------------------------------G---TTTT---TT---EEE
T ss_pred -------------------------------------------------------------h---hhhh-ccccCCCCeE
Confidence 0 0000 2235689999
Q ss_pred EEEeCCCccch--hHHHHHHHhcccceeEEEEcCCCCccccc
Q 018916 248 IFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEE 287 (349)
Q Consensus 248 ii~g~~D~~~~--~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 287 (349)
-|+|++|.+++ .++.+.+.+.+. .+++.. ++||.+...
T Consensus 166 Hv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h-~gGH~vP~~ 205 (212)
T PF03959_consen 166 HVIGENDPVVPPERSEALAEMFDPD-ARVIEH-DGGHHVPRK 205 (212)
T ss_dssp EEEETT-SSS-HHHHHHHHHHHHHH-EEEEEE-SSSSS----
T ss_pred EEEeCCCCCcchHHHHHHHHhccCC-cEEEEE-CCCCcCcCC
Confidence 99999999994 777788888864 556666 599987754
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-07 Score=89.99 Aligned_cols=226 Identities=11% Similarity=0.073 Sum_probs=140.7
Q ss_pred EEeCCCeeEEEEEccCC------CCCeEEEecCCCCChhhh-hcccccchhhhhhhcCCeEEEEECCCCCCCCCCC----
Q 018916 24 LIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSC-FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA---- 92 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~-~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~---- 92 (349)
.+..+|....+...-|+ .-|.+|.+||...+.... .-..-|.. .-....|+.|+.+|.||.|.-...
T Consensus 502 ~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~--~~~s~~g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 502 KIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNE--VVVSSRGFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred EEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHH--HhhccCCeEEEEEcCCCcCCcchhHHHH
Confidence 34446767767665542 346888889987632221 11111311 134467999999999998754422
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcc-cceeEEecCCCCCCChhHHhhhhhhh
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
.........++|....+..+++.. +.+++.++|+|+||++++.++...|+. +++.+.++|..... .....
T Consensus 580 ~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~------ 652 (755)
T KOG2100|consen 580 LPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDST------ 652 (755)
T ss_pred hhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccc------
Confidence 112233467778777777777654 336799999999999999999999844 56668888877653 11100
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCce-EE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS-LI 248 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-li 248 (349)
...++.+. . .+. ...+.+ ......+..++.|. |+
T Consensus 653 ---------------~terymg~-p--------~~~-~~~y~e--------------------~~~~~~~~~~~~~~~Ll 687 (755)
T KOG2100|consen 653 ---------------YTERYMGL-P--------SEN-DKGYEE--------------------SSVSSPANNIKTPKLLL 687 (755)
T ss_pred ---------------ccHhhcCC-C--------ccc-cchhhh--------------------ccccchhhhhccCCEEE
Confidence 00111111 0 000 000111 11222334445554 99
Q ss_pred EEeCCCccc--hhHHHHHHHhcccc--eeEEEEcCCCCcccccCh-hhHHHHHHHHHhhc
Q 018916 249 FVGESSPFH--SEAVHMTSKIDRRY--SALVEVQACGSMVTEEQP-HAMLIPMEYFLMGY 303 (349)
Q Consensus 249 i~g~~D~~~--~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~ 303 (349)
+||+.|.-+ +.+..+.+.+...+ .+..++|+..|.+..-.. ..+...+..|+..+
T Consensus 688 iHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 688 IHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred EEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 999999888 77778888887644 788999999998887443 56778888999854
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-08 Score=83.67 Aligned_cols=106 Identities=17% Similarity=0.195 Sum_probs=71.6
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHc--
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHF-- 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l-~~l-- 116 (349)
..=|+|||+||+.... .+|. ..+....+.||-|+.+|+...+... .........++.+++.+=+ ..+
T Consensus 15 g~yPVv~f~~G~~~~~-s~Ys-----~ll~hvAShGyIVV~~d~~~~~~~~----~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLIN-SWYS-----QLLEHVASHGYIVVAPDLYSIGGPD----DTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCcCEEEEeCCcCCCH-HHHH-----HHHHHHHhCceEEEEecccccCCCC----cchhHHHHHHHHHHHHhcchhhccc
Confidence 4568999999998553 3332 4456777889999999977753311 1111123333333333211 122
Q ss_pred ----CCCcEEEEEechhHHHHHHHHHhh-----hcccceeEEecCCCC
Q 018916 117 ----GLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCK 155 (349)
Q Consensus 117 ----~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~ 155 (349)
+..++.|.|||-||-+|..++..+ +.+++++++++|.-.
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 346899999999999999999887 558999999999863
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.5e-07 Score=70.69 Aligned_cols=118 Identities=12% Similarity=0.159 Sum_probs=72.5
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
+++.|||+|+||+.|..+|.++. + ..||++|+..... .+..+.+. ...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~--------------------------~L~~~ig~-~~~-- 107 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEE--------------------------NMEGKIDR-PEE-- 107 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHH--------------------------HHHHHhCC-Ccc--
Confidence 57999999999999999999984 4 5578899877521 11111111 000
Q ss_pred CCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccce-eEEEE
Q 018916 199 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYS-ALVEV 277 (349)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~i 277 (349)
..++.+...+.+. .+-.-..+++..+.|.+. +.++..+.+.+ . +.++.
T Consensus 108 ----y~~~~~~h~~eL~------------------------~~~p~r~~vllq~gDEvL-Dyr~a~~~y~~--~y~~~v~ 156 (180)
T PRK04940 108 ----YADIATKCVTNFR------------------------EKNRDRCLVILSRNDEVL-DSQRTAEELHP--YYEIVWD 156 (180)
T ss_pred ----hhhhhHHHHHHhh------------------------hcCcccEEEEEeCCCccc-CHHHHHHHhcc--CceEEEE
Confidence 0011111111110 011223688999999988 44455555665 5 78888
Q ss_pred cCCCCcccccChhhHHHHHHHHHh
Q 018916 278 QACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 278 ~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+|+.|-+ ++-++....|.+|++
T Consensus 157 ~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 157 EEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred CCCCCCC--CCHHHHHHHHHHHHh
Confidence 8888843 456678888888885
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.3e-09 Score=92.07 Aligned_cols=90 Identities=13% Similarity=0.124 Sum_probs=67.3
Q ss_pred cchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcc
Q 018916 64 FCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143 (349)
Q Consensus 64 ~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 143 (349)
|...+..+.+.||.+ ..|++|+|.+.+. .......++++.+.+.++.+..+.++++|+||||||.+++.++..+|+.
T Consensus 110 ~~~li~~L~~~GY~~-~~dL~g~gYDwR~--~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 110 FHDMIEQLIKWGYKE-GKTLFGFGYDFRQ--SNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHcCCcc-CCCcccCCCCccc--cccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 556666777778755 8999999987642 1111234556666666666777888999999999999999999888764
Q ss_pred ----cceeEEecCCCCC
Q 018916 144 ----VLGLILVSPLCKA 156 (349)
Q Consensus 144 ----v~~lvl~~~~~~~ 156 (349)
|+++|.++++...
T Consensus 187 ~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 187 FEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHhHhccEEEECCCCCC
Confidence 7899999887654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.2e-07 Score=76.94 Aligned_cols=57 Identities=14% Similarity=0.237 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHHHHH----cCCCcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCCC
Q 018916 100 LSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (349)
.++...++.+..++.. .+++++.+|||||||..+..|+..+.. ++.++|.+++++..
T Consensus 80 ~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 80 ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 3677788888777754 478899999999999999999887532 48999999987764
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.8e-08 Score=74.76 Aligned_cols=82 Identities=20% Similarity=0.283 Sum_probs=62.4
Q ss_pred hhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HcCCCcEEEEEechhHHHHHHHHHhhh
Q 018916 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN----HFGLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 66 ~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
.....+.++|+.|+.+|-+-+=.+. .+.++.+.|+..+++ +.+.++++|+|.|+|+-+......+.|
T Consensus 20 ~~a~~l~~~G~~VvGvdsl~Yfw~~---------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp 90 (192)
T PF06057_consen 20 QIAEALAKQGVPVVGVDSLRYFWSE---------RTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLP 90 (192)
T ss_pred HHHHHHHHCCCeEEEechHHHHhhh---------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCC
Confidence 4456677889999999987764432 466777777777664 456789999999999988887777665
Q ss_pred ----cccceeEEecCCCCC
Q 018916 142 ----HRVLGLILVSPLCKA 156 (349)
Q Consensus 142 ----~~v~~lvl~~~~~~~ 156 (349)
++|..++|+++....
T Consensus 91 ~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 91 AALRARVAQVVLLSPSTTA 109 (192)
T ss_pred HHHHhheeEEEEeccCCcc
Confidence 468999999987654
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.3e-07 Score=71.08 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=134.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCC---CCCC--CCCCCCCHHHHHHHHHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGA---AAIS--DDEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~---~~~~--~~~~~~~~~~~~~~l~~~l~ 114 (349)
.+++.+++++|.++...- +..+ - ..+...+-+.+.|+.+-..||-.-. +..+ .....+++++.++.-.++++
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y~~F-~-~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-YTEF-A-RHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCceEEEEecCCCCchhH-HHHH-H-HHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 567889999999877533 2222 1 2222333344779999999995332 1111 12356889999998888887
Q ss_pred HcC--CCcEEEEEechhHHHHHHHHHhhh--cccceeEEecCCCCCC--ChhHHhhhhh---------hhHHHHhcCcch
Q 018916 115 HFG--LGAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCKAP--SWTEWLYNKV---------MSNLLYYYGMCG 179 (349)
Q Consensus 115 ~l~--~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~ 179 (349)
..- ..+++++|||-|+++.+.+..... -.|.+.+++-|..... +...+...+. ....+...-...
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 653 367999999999999999887422 2477888877765321 1100000000 000000011111
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchh---HHH-HHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSN---VWH-FLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
+++..+....+...+. ..++...-.......-.+. +.. -+..+.. -..+.+.+-.+-+.+.+|..|.
T Consensus 184 ~ir~~Li~~~l~~~n~-------p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~--~d~e~~een~d~l~Fyygt~Dg 254 (301)
T KOG3975|consen 184 FIRFILIKFMLCGSNG-------PQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT--RDIEYCEENLDSLWFYYGTNDG 254 (301)
T ss_pred HHHHHHHHHhcccCCC-------cHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH--hHHHHHHhcCcEEEEEccCCCC
Confidence 1211111211111010 2222211111110000000 000 0000000 0112233445678899999999
Q ss_pred cc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 256 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++ .....+.+.++..+.++-+ ++.-|..-..+.+..+..+.+.++
T Consensus 255 W~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 255 WVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred CcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 99 5666788899986677777 789999888888888888877653
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.3e-09 Score=84.27 Aligned_cols=91 Identities=19% Similarity=0.161 Sum_probs=52.2
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeE---EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
.||||+||.+.+... -|......+.++||. |+++++-................+..++++.|..+++.-|.
T Consensus 2 ~PVVlVHG~~~~~~~-----~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYS-----NWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA- 75 (219)
T ss_dssp --EEEE--TTTTTCG-----GCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--
T ss_pred CCEEEECCCCcchhh-----CHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-
Confidence 479999999875433 155666788899999 79999954432110000000012234666677777777888
Q ss_pred cEEEEEechhHHHHHHHHHh
Q 018916 120 AVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+|.||||||||.++-.+...
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999999877653
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.9e-09 Score=83.44 Aligned_cols=51 Identities=16% Similarity=0.334 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 105 LADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 105 ~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
+.+...++++.. ..++|.|+|.|.||-+|+.+|..+| .|+++|.++|....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 344455555443 2368999999999999999999998 69999999987754
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.3e-08 Score=76.00 Aligned_cols=107 Identities=14% Similarity=0.195 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-- 118 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-- 118 (349)
.+--||||-|++..-..+.. -..+..++.+.++..+-+-++.+ ..+....++++-++|+..++++++.
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y---~~~L~~~lde~~wslVq~q~~Ss-------y~G~Gt~slk~D~edl~~l~~Hi~~~~ 104 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLY---TTMLNRYLDENSWSLVQPQLRSS-------YNGYGTFSLKDDVEDLKCLLEHIQLCG 104 (299)
T ss_pred eEEEEEEEcccCCCcccccc---HHHHHHHHhhccceeeeeecccc-------ccccccccccccHHHHHHHHHHhhccC
Confidence 34579999888765433311 12455677788999999988875 2334557888889999999998754
Q ss_pred --CcEEEEEechhHHHHHHHHH--hhhcccceeEEecCCCCCC
Q 018916 119 --GAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 119 --~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~~~ 157 (349)
..|+|+|||.|+.=.+.|.. ..+..+++.|+.+|.....
T Consensus 105 fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 105 FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 47999999999998888773 3455688888888877653
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.1e-07 Score=83.89 Aligned_cols=105 Identities=18% Similarity=0.162 Sum_probs=54.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC--C--CC-------------C-------
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA--I--SD-------------D------- 96 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~--~--~~-------------~------- 96 (349)
.-|+|||-||++++...+ .....++.++||-|+++|+|-. |..- . .. .
T Consensus 99 ~~PvvIFSHGlgg~R~~y------S~~~~eLAS~GyVV~aieHrDg--Sa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSY------SAICGELASHGYVVAAIEHRDG--SAPATYFMRDGSGAEVEPYVVEYLEEEWIPLR 170 (379)
T ss_dssp -EEEEEEE--TT--TTTT------HHHHHHHHHTT-EEEEE---SS---SSEEEE-SSHHHHHHT---------EEEE--
T ss_pred CCCEEEEeCCCCcchhhH------HHHHHHHHhCCeEEEEeccCCC--ceeEEEeccCCCccccccccccccccceeccc
Confidence 458999999999886542 2334688899999999999975 3210 0 00 0
Q ss_pred -C-CCCC-------HHHHHHHHHHHHHH--------------------------cCCCcEEEEEechhHHHHHHHHHhhh
Q 018916 97 -E-PVLS-------VDDLADQIAEVLNH--------------------------FGLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 97 -~-~~~~-------~~~~~~~l~~~l~~--------------------------l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
. .... ++.-++++..+++. ++.+++.++|||+||..++..+.+.
T Consensus 171 ~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d- 249 (379)
T PF03403_consen 171 DFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD- 249 (379)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-
Confidence 0 0000 00111222222221 1235789999999999999877766
Q ss_pred cccceeEEecCCC
Q 018916 142 HRVLGLILVSPLC 154 (349)
Q Consensus 142 ~~v~~lvl~~~~~ 154 (349)
.++++.|+++++.
T Consensus 250 ~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 250 TRFKAGILLDPWM 262 (379)
T ss_dssp TT--EEEEES---
T ss_pred cCcceEEEeCCcc
Confidence 6799999999864
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.71 E-value=1e-08 Score=88.49 Aligned_cols=108 Identities=14% Similarity=0.151 Sum_probs=63.5
Q ss_pred CCCCeEEEecCCCCCh-h-hhhcccccchhhhhhhc---CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 018916 40 QDKPALVTYPDLALNY-M-SCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~-~-~~~~~~~~~~~~~~~l~---~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~ 114 (349)
..+|++|++|||..+. . .|.. .....++. .+++||++|+... +... ............+.+..+++
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~-----~~~~all~~~~~d~NVI~VDWs~~--a~~~--Y~~a~~n~~~vg~~la~~l~ 139 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQ-----DMIKALLQKDTGDYNVIVVDWSRG--ASNN--YPQAVANTRLVGRQLAKFLS 139 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHH-----HHHHHHHCC--S-EEEEEEE-HHH--HSS---HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHH-----HHHHHHHhhccCCceEEEEcchhh--cccc--ccchhhhHHHHHHHHHHHHH
Confidence 4789999999998887 2 2222 22233444 4899999999654 2210 00000122333444444443
Q ss_pred ----Hc--CCCcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCCC
Q 018916 115 ----HF--GLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 156 (349)
Q Consensus 115 ----~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 156 (349)
.. ..++++|||||+||.||-..+..... +|.+++-++|+.+.
T Consensus 140 ~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 140 FLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 32 34789999999999999988887776 89999999998764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.1e-07 Score=74.24 Aligned_cols=112 Identities=13% Similarity=0.115 Sum_probs=71.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCC--CCC---CCCCCCCHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAA--AIS---DDEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~--~~~---~~~~~~~~~~~~~~l~~~l~ 114 (349)
..|.||++||.+.+........-| ..+. ++||-|+.++......... .+. ..........+++.+.++..
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~----~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~ 90 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGW----NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAA 90 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCH----HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhh
Confidence 358999999999987664333223 2222 4589999998643211111 000 00011122333444444555
Q ss_pred HcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 115 HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
+.++ .+|++.|+|.||+.+..++..+|+.+.++..++.....
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYG 134 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccc
Confidence 5554 58999999999999999999999999998888776543
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-06 Score=68.47 Aligned_cols=58 Identities=16% Similarity=0.300 Sum_probs=44.7
Q ss_pred ccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 241 KLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+++|.|-|.|+.|.++ ..++.+++.+.+ ..++.- .+||++.-.+ .+.+.|.+|+++.
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~--a~vl~H-pggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKD--ATVLEH-PGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCC--CeEEec-CCCccCCCch--HHHHHHHHHHHHH
Confidence 57899999999999999 556889999998 544444 4999887644 5666677776654
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.1e-07 Score=72.29 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=61.4
Q ss_pred hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHcCCCcEEEEEechhHHHHHHHHHhh---hccc
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHFGLGAVMCMGVTAGAYILTLFAMKY---RHRV 144 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l-~~l~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v 144 (349)
...+..++.|+++|++|+|.+.. ...+++++++.+...+ +.....+++++|||+||.++..++.+. ++.+
T Consensus 19 ~~~l~~~~~v~~~~~~g~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~ 92 (212)
T smart00824 19 AAALRGRRDVSALPLPGFGPGEP------LPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPP 92 (212)
T ss_pred HHhcCCCccEEEecCCCCCCCCC------CCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCC
Confidence 45566789999999999986542 2246788777665554 444467899999999999999988864 4568
Q ss_pred ceeEEecCCCCC
Q 018916 145 LGLILVSPLCKA 156 (349)
Q Consensus 145 ~~lvl~~~~~~~ 156 (349)
.+++++++....
T Consensus 93 ~~l~~~~~~~~~ 104 (212)
T smart00824 93 AAVVLLDTYPPG 104 (212)
T ss_pred cEEEEEccCCCC
Confidence 999988875543
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.4e-08 Score=78.97 Aligned_cols=115 Identities=14% Similarity=0.089 Sum_probs=70.4
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI-SDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
+.+..+||+||+..+........ .++...+...-.++.+.||+.|.-..-. .......+-..+++.+..+.+..+.
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~---aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~ 92 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRA---AQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI 92 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHH---HHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC
Confidence 46779999999977754432222 2333444333389999999987521100 0001112333333334444444467
Q ss_pred CcEEEEEechhHHHHHHHHHh----hh-----cccceeEEecCCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMK----YR-----HRVLGLILVSPLCKAP 157 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~~~~~ 157 (349)
++|++++||||+.+.+..... .+ .++..+++++|-....
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 899999999999999987653 11 3578899998877654
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.2e-07 Score=82.47 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=126.8
Q ss_pred CCCeEEEecCCCCChhhh--hcccccchhhhhhhcCCeEEEEECCCCCCCCCC----CCCCCCCCCCHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSC--FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA----AISDDEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~--~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~----~~~~~~~~~~~~~~~~~l~~~l~ 114 (349)
.-|+++++-|...-.... |...-+ -....+.+.||.|+.+|-||.-.-.. .....-....++|.++.+.-+.+
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~y-lR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQY-LRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceeh-hhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 357999998875443222 111100 11245567899999999999632211 01122335678899999998888
Q ss_pred HcC---CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcc
Q 018916 115 HFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (349)
Q Consensus 115 ~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (349)
+.| .++|.+-|||+||++++....++|+-++..|.-+|...-.... ....+++++
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YD----------------------TgYTERYMg 777 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYD----------------------TGYTERYMG 777 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeec----------------------ccchhhhcC
Confidence 875 4789999999999999999999999777665444432211000 011122322
Q ss_pred cccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc
Q 018916 192 KQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 269 (349)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~ 269 (349)
-++. ++ ..| ........... +..=.-..|++||--|.-+ .....+.+.+-.
T Consensus 778 ~P~~-------nE---~gY-------~agSV~~~Vek----------lpdepnRLlLvHGliDENVHF~Hts~Lvs~lvk 830 (867)
T KOG2281|consen 778 YPDN-------NE---HGY-------GAGSVAGHVEK----------LPDEPNRLLLVHGLIDENVHFAHTSRLVSALVK 830 (867)
T ss_pred CCcc-------ch---hcc-------cchhHHHHHhh----------CCCCCceEEEEecccccchhhhhHHHHHHHHHh
Confidence 2000 00 000 00011111111 2222335899999999877 444455555543
Q ss_pred cc--eeEEEEcCCCCcccc-cChhhHHHHHHHHHhh
Q 018916 270 RY--SALVEVQACGSMVTE-EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 270 ~~--~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 302 (349)
++ -++.++|+-.|.+-. |..+-+...|..||++
T Consensus 831 agKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 831 AGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 33 689999999998876 5556677889999986
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.4e-07 Score=76.34 Aligned_cols=102 Identities=14% Similarity=0.207 Sum_probs=68.0
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--C
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--G 119 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--~ 119 (349)
+..||+.-|..+-... -.+..-++.||.|+.+++||++.|... .....+...+-.-+...++.+|. +
T Consensus 243 q~LvIC~EGNAGFYEv--------G~m~tP~~lgYsvLGwNhPGFagSTG~---P~p~n~~nA~DaVvQfAI~~Lgf~~e 311 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV--------GVMNTPAQLGYSVLGWNHPGFAGSTGL---PYPVNTLNAADAVVQFAIQVLGFRQE 311 (517)
T ss_pred ceEEEEecCCccceEe--------eeecChHHhCceeeccCCCCccccCCC---CCcccchHHHHHHHHHHHHHcCCCcc
Confidence 4467777665433222 122344577999999999999887631 11222222222223334566664 6
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
.++++|||.||.-++..|..||+ |+++||-++.-.
T Consensus 312 dIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 312 DIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred ceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 79999999999999999999997 999998776543
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-05 Score=67.84 Aligned_cols=114 Identities=11% Similarity=-0.039 Sum_probs=71.2
Q ss_pred CceeEEeCCCeeEEEEEc---cCCCCCeEEEecCCCCChhhhhcccccchhhhhh-hcCCeEEEEECCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~---g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~-l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
.++..+..++..+-.... .......||+.-|.+...............+..+ ...+-+|+.+++||.|.|..
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G---- 187 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG---- 187 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC----
Confidence 356667777766533222 2235668999977544332210000000111222 24589999999999998862
Q ss_pred CCCCCCHHHHHHHHHHHHHHcC-------CCcEEEEEechhHHHHHHHHHhh
Q 018916 96 DEPVLSVDDLADQIAEVLNHFG-------LGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~-------~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
..+.++++.+-.+.++.|. .+++++.|||+||.++.+.+.++
T Consensus 188 ---~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 188 ---PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 2356888888777776552 26799999999999999765554
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.59 E-value=2e-05 Score=69.99 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=62.9
Q ss_pred hhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhh
Q 018916 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 66 ~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+++-..+..|+.||.+...-. + ....+++|.......+++.+. ..+++|+|-+.||..++.+|+.+
T Consensus 91 SevG~AL~~GHPvYFV~F~p~-------P--~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~ 161 (581)
T PF11339_consen 91 SEVGVALRAGHPVYFVGFFPE-------P--EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALR 161 (581)
T ss_pred cHHHHHHHcCCCeEEEEecCC-------C--CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcC
Confidence 566777888999998866433 1 223688888877777775542 34889999999999999999999
Q ss_pred hcccceeEEecCCCC
Q 018916 141 RHRVLGLILVSPLCK 155 (349)
Q Consensus 141 p~~v~~lvl~~~~~~ 155 (349)
|+++.-+|+.+.+..
T Consensus 162 Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 162 PDLVGPLVLAGAPLS 176 (581)
T ss_pred cCccCceeecCCCcc
Confidence 999999888776653
|
Their function is unknown. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.58 E-value=1e-06 Score=76.15 Aligned_cols=113 Identities=15% Similarity=0.139 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
..|+||++||+|.--......+.+-..+..++. ...++++|+.-.. ... ....-+..+.+.++....+++..|.++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~--~~~-~~~~yPtQL~qlv~~Y~~Lv~~~G~~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTS--SDE-HGHKYPTQLRQLVATYDYLVESEGNKN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccc--ccc-CCCcCchHHHHHHHHHHHHHhccCCCe
Confidence 579999999986543221111101012233344 6689999987652 000 122334788888989999998889999
Q ss_pred EEEEEechhHHHHHHHHHhhh--c---ccceeEEecCCCCCC
Q 018916 121 VMCMGVTAGAYILTLFAMKYR--H---RVLGLILVSPLCKAP 157 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p--~---~v~~lvl~~~~~~~~ 157 (349)
++|+|-|.||.+++.++.... + .-+++|+++|+....
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998876421 1 257999999998754
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.8e-06 Score=76.96 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=81.3
Q ss_pred eeEEeC-CCeeEEEEEccC---CCCCeEEEec--CCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 22 DNLIKT-SHGSLSVTIYGD---QDKPALVTYP--DLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 22 ~~~i~~-~~~~l~~~~~g~---~~~p~vv~lH--G~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
...|.. +|.+|+..++-+ +..|+++..+ -..-..........-.+.-..+.++||.|+..|.||.|.|+....
T Consensus 21 ~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~- 99 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFD- 99 (563)
T ss_pred eeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccc-
Confidence 345555 777887776654 3567888777 221111011100100011114678899999999999999884322
Q ss_pred CCCCCC--HHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 96 DEPVLS--VDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 96 ~~~~~~--~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
..++ .+| ..|+.+++.+. ...+|..+|.|++|+..+.+|+..|..++.++-..+...
T Consensus 100 --~~~~~E~~D-g~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 100 --PESSREAED-GYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred --eeccccccc-hhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 1122 122 22444455433 237899999999999999999988888888888777665
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-06 Score=68.06 Aligned_cols=64 Identities=11% Similarity=0.120 Sum_probs=43.9
Q ss_pred cccCCceEEEEeCCCccc--hhHHHHHHHhcc---cceeEEEEcCCCCcccc-----cCh------hhHHHHHHHHHhhc
Q 018916 240 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDR---RYSALVEVQACGSMVTE-----EQP------HAMLIPMEYFLMGY 303 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~-----e~p------~~~~~~i~~fl~~~ 303 (349)
.++++|+|++.|+.|.++ .....+.+.+.. .+.++.++++.+|..+. +.| |+..+.+..|++++
T Consensus 161 ~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 161 ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 456799999999999997 444445555543 23579999999996552 334 34456667777654
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.53 E-value=3e-05 Score=70.36 Aligned_cols=127 Identities=15% Similarity=0.090 Sum_probs=77.6
Q ss_pred CeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhh------------hhcCCeEEEEECCC-CCCCCCC
Q 018916 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACS------------LLLHNFCIYHINPP-GHEFGAA 91 (349)
Q Consensus 29 ~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~------------~l~~g~~vi~~D~~-G~G~s~~ 91 (349)
+..+.|..+.. .++|.||.+.|.++.++.+-.-.-..+.... -..+..+++-+|.| |.|.|-.
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~ 102 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYG 102 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EE
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeec
Confidence 56787776542 4679999999997776554110001111111 12346899999955 9999875
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc-------CCCcEEEEEechhHHHHHHHHHh----h------hcccceeEEecCCC
Q 018916 92 AISDDEPVLSVDDLADQIAEVLNHF-------GLGAVMCMGVTAGAYILTLFAMK----Y------RHRVLGLILVSPLC 154 (349)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~ 154 (349)
..... ...+.++.++++.++|+.+ ...+++|.|-|+||..+..+|.+ . +-.++|+++.++..
T Consensus 103 ~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 103 NDPSD-YVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp SSGGG-GS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred ccccc-ccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 43221 2457788888888877543 44589999999999988777653 2 23478999988877
Q ss_pred CC
Q 018916 155 KA 156 (349)
Q Consensus 155 ~~ 156 (349)
..
T Consensus 182 dp 183 (415)
T PF00450_consen 182 DP 183 (415)
T ss_dssp BH
T ss_pred cc
Confidence 54
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.9e-07 Score=79.48 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=44.6
Q ss_pred hhccccCCceEEEEeCCCccc---hhHHHHHHHhcccceeEEEEcCCCCcccccChhhH
Q 018916 237 EGLRKLQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 292 (349)
Q Consensus 237 ~~l~~i~~Pvlii~g~~D~~~---~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 292 (349)
..+.+++.|++++.|..|.+. .........+++...-+..++++.|+-+.+-..+.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 446788999999999999865 44455677788754578889999999999877764
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.1e-06 Score=69.69 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=89.7
Q ss_pred CceeEEeCCCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC-C------CC
Q 018916 20 GKDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG-H------EF 88 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G-~------G~ 88 (349)
.+...+..++.+..|+.+-| .+.|.||.+||...++.......-|.. -.-..||-|+.+|--. + |.
T Consensus 35 ~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~---lAd~~gFlV~yPdg~~~~wn~~~~~~ 111 (312)
T COG3509 35 SSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDA---LADREGFLVAYPDGYDRAWNANGCGN 111 (312)
T ss_pred CCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhh---hhcccCcEEECcCccccccCCCcccc
Confidence 34455666777777777655 245789999999999887755554522 1224599999995222 1 11
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 89 GAAAISDDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 89 s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
+..+............+++.+..++.+.+++ +|++.|.|-||..+..++..+|+.+.++..++...
T Consensus 112 ~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 112 WFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1101111122234555566666677777776 79999999999999999999999999988888766
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.2e-07 Score=73.20 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=68.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF---- 116 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l---- 116 (349)
.-|+|+|+||+.....- |...+.....+||-|+++++-.- ... .......+....++++..-++++
T Consensus 45 ~yPVilF~HG~~l~ns~------Ys~lL~HIASHGfIVVAPQl~~~--~~p--~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSF------YSQLLAHIASHGFIVVAPQLYTL--FPP--DGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CccEEEEeechhhhhHH------HHHHHHHHhhcCeEEEechhhcc--cCC--CchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 56899999999766422 33444667788999999999764 221 00011112222333333333322
Q ss_pred ---CCCcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCCC
Q 018916 117 ---GLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 156 (349)
Q Consensus 117 ---~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 156 (349)
++.++.++|||.||-.|..+|..+.. ++.++|.++|....
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 34689999999999999999987742 47888988887654
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.44 E-value=3.5e-06 Score=71.88 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=50.7
Q ss_pred hhhhhhcCCeEEEEECCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHh---
Q 018916 67 EACSLLLHNFCIYHINPPGHEFGAAAIS-DDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMK--- 139 (349)
Q Consensus 67 ~~~~~l~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~~~~l~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~--- 139 (349)
.+..++++||.|+++|+.|-|. +.. .....+.+-|.++...++....++ .++.++|||-||.-++..|..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~---~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~ 94 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGT---PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPS 94 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCC---cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHH
Confidence 4568889999999999999976 111 111112222333333333332332 579999999999988765543
Q ss_pred -hhcc---cceeEEecCCC
Q 018916 140 -YRHR---VLGLILVSPLC 154 (349)
Q Consensus 140 -~p~~---v~~lvl~~~~~ 154 (349)
.|+. +.+.+..+++.
T Consensus 95 YApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 95 YAPELNRDLVGAAAGGPPA 113 (290)
T ss_pred hCcccccceeEEeccCCcc
Confidence 2442 55666555544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.4e-06 Score=74.88 Aligned_cols=113 Identities=14% Similarity=0.138 Sum_probs=58.2
Q ss_pred CCCeEEEecCCCCChhhhhcc---------ccc---chhhhhhhcCCeEEEEECCCCCCCCCCCCCCC-CCCCCHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQG---------LFF---CPEACSLLLHNFCIYHINPPGHEFGAAAISDD-EPVLSVDDLAD 107 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~---------~~~---~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~-~~~~~~~~~~~ 107 (349)
.-|+||++||=+.+....-.. ..+ .....++.++||-|+++|.+|+|+........ ...++.+.++.
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 457999999976654221000 000 12245677899999999999999654321111 11223333322
Q ss_pred HH---------------HHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 108 QI---------------AEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 108 ~l---------------~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
.+ ...++.+ +.++|.++|+||||..++.+++.. ++|+..|..+-..
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 11 1122222 236899999999999999888876 5788877766543
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.1e-05 Score=66.32 Aligned_cols=119 Identities=13% Similarity=0.169 Sum_probs=73.4
Q ss_pred CCCeeEEEEEccCC------CC-CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCC-CCCCCC-----
Q 018916 27 TSHGSLSVTIYGDQ------DK-PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAI----- 93 (349)
Q Consensus 27 ~~~~~l~~~~~g~~------~~-p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G-~s~~~~----- 93 (349)
.-+..+.|+.+-|+ .- |.|||+||.|..+...+ ..+..|...++.+.+-.+ .--.|.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~----------~~l~sg~gaiawa~pedqcfVlAPQy~~if 238 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND----------KVLSSGIGAIAWAGPEDQCFVLAPQYNPIF 238 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh----------hhhhcCccceeeecccCceEEEcccccccc
Confidence 34567888877652 22 89999999987774432 222333444444444433 000000
Q ss_pred --CCCCCCCCHHHHHHHHH-HHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 94 --SDDEPVLSVDDLADQIA-EVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 94 --~~~~~~~~~~~~~~~l~-~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
.+.....-.....+.+. .+.++.++ .+++++|.|+||+-++.++.++|+.+.+.++++....
T Consensus 239 ~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 239 ADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred cccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 00011122334444444 33356665 5799999999999999999999999999999987654
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.6e-06 Score=69.76 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=75.4
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~-~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
..+..+||+||+..+-....... .++.........++.+-||..|.--. ........++-.++...|..+.+....
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~---aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRT---AQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHH---HHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 35679999999965543322211 34445556677889999998874210 001112235555666566666666667
Q ss_pred CcEEEEEechhHHHHHHHHHh--------hhcccceeEEecCCCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMK--------YRHRVLGLILVSPLCKAPS 158 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~~~~~~~~ 158 (349)
++|+|++||||.+++++...+ .+.+++-+||.+|-...+.
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 899999999999999987653 2446788888877666543
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.2e-05 Score=61.49 Aligned_cols=106 Identities=17% Similarity=0.165 Sum_probs=62.1
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC------------CCCC--CCCCCCHHHHHH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA------------AISD--DEPVLSVDDLAD 107 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~------------~~~~--~~~~~~~~~~~~ 107 (349)
..+||++||.+.++..|. +.+..+-.++..-|++.-|-.-.+.. .... ......+...++
T Consensus 3 ~atIi~LHglGDsg~~~~------~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~ 76 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWA------QFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAAD 76 (206)
T ss_pred eEEEEEEecCCCCCccHH------HHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHH
Confidence 458999999999987742 22233333444555553222100000 0000 001234555566
Q ss_pred HHHHHHHHc---C--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 108 QIAEVLNHF---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 108 ~l~~~l~~l---~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
.+..+++.. | ..++.+-|.|+||.+++..+..+|..+.+++-..+.
T Consensus 77 ~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 77 NIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 666666432 3 357899999999999999999998777776654443
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.6e-06 Score=71.60 Aligned_cols=53 Identities=13% Similarity=0.162 Sum_probs=41.4
Q ss_pred HHHHHHHHHHH-HcCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 104 DLADQIAEVLN-HFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 104 ~~~~~l~~~l~-~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
-+.+++..+++ .++.. +..++|+||||..|+.++.++|+.+.+++.+++....
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 34455555553 44432 2699999999999999999999999999999987654
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.7e-05 Score=65.65 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH 86 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~ 86 (349)
.-|.|||-||++++. ..|..++ ..+..+||-|.++++|-+
T Consensus 117 k~PvvvFSHGLggsR-t~YSa~c-----~~LAShG~VVaavEHRD~ 156 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSR-TLYSAYC-----TSLASHGFVVAAVEHRDR 156 (399)
T ss_pred CccEEEEecccccch-hhHHHHh-----hhHhhCceEEEEeecccC
Confidence 348999999999875 3333332 578899999999999988
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.3e-06 Score=72.89 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=75.5
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeE---EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
.-++|++||++.+... +... + ..+...|+. ++.+++++... .......-+.+...+.+++...+.
T Consensus 59 ~~pivlVhG~~~~~~~-~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~ql~~~V~~~l~~~ga 126 (336)
T COG1075 59 KEPIVLVHGLGGGYGN-FLPL-D----YRLAILGWLTNGVYAFELSGGDG------TYSLAVRGEQLFAYVDEVLAKTGA 126 (336)
T ss_pred CceEEEEccCcCCcch-hhhh-h----hhhcchHHHhcccccccccccCC------CccccccHHHHHHHHHHHHhhcCC
Confidence 3489999999555444 3323 1 123344565 88888886511 112335667777778888888888
Q ss_pred CcEEEEEechhHHHHHHHHHhhh--cccceeEEecCCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCKAP 157 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~ 157 (349)
+++.++||||||.+...++...+ .+|+.++.++++....
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999999999999998887 7899999999887653
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00012 Score=61.06 Aligned_cols=60 Identities=10% Similarity=0.218 Sum_probs=47.7
Q ss_pred ccCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccc-cChhhHHHHHHHHH
Q 018916 241 KLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFL 300 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 300 (349)
...+|-|+++++.|.++ ++.++..+..... .++...++++.|..|+ ++|+++.+++.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 34689999999999999 5556555444332 3778888999999998 89999999999885
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00081 Score=57.96 Aligned_cols=135 Identities=13% Similarity=0.112 Sum_probs=78.9
Q ss_pred CCceeEEeCCCeeEEEEEc---cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC--CCCCC--
Q 018916 19 SGKDNLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH--EFGAA-- 91 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~---g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~--G~s~~-- 91 (349)
..+-+.+..++.++-.... +.....+||+|||.+.+.. |.... ..+-..+-..|++.+++.+|.- .....
T Consensus 61 ~~e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d-~p~~i--~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 61 ADEVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPD-WPGLI--APLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred HhhcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCC-cHhHH--HHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 3566677776665432222 2234559999999987752 11101 1233455577999999988881 10000
Q ss_pred ------------CCCCCCCC---------CCH----HHHHHHHH---HHHHHcCCCcEEEEEechhHHHHHHHHHhhhc-
Q 018916 92 ------------AISDDEPV---------LSV----DDLADQIA---EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH- 142 (349)
Q Consensus 92 ------------~~~~~~~~---------~~~----~~~~~~l~---~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~- 142 (349)
........ ... +.+...|. .+++..+..+++|+||+.|+..++.|....+.
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 00000000 011 22222333 33455566679999999999999999887764
Q ss_pred ccceeEEecCCCCC
Q 018916 143 RVLGLILVSPLCKA 156 (349)
Q Consensus 143 ~v~~lvl~~~~~~~ 156 (349)
.++++|++++....
T Consensus 218 ~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 218 MPDALVLINAYWPQ 231 (310)
T ss_pred ccCeEEEEeCCCCc
Confidence 48999999986544
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.5e-05 Score=69.30 Aligned_cols=180 Identities=9% Similarity=0.054 Sum_probs=108.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH------
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN------ 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~------ 114 (349)
..|.++++||.+....+......| .....+..+--.|-.+|++.- .+ ...+..-++.+..+.+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~w-qs~lsl~gevvev~tfdl~n~--ig--------G~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSW-QSRLSLKGEVVEVPTFDLNNP--IG--------GANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhH-HHHHhhhceeeeeccccccCC--CC--------CcchHHHHHHHHHHhhhhhhhh
Confidence 567899999988221121111224 222344445556678888764 11 1344444444444433
Q ss_pred --HcCCCcEEEEEechhHHHHHHHHHhhh-cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcc
Q 018916 115 --HFGLGAVMCMGVTAGAYILTLFAMKYR-HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (349)
Q Consensus 115 --~l~~~~v~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (349)
++...+++|+|.|||+.++........ ..|+++|.++-+......
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg-------------------------------- 291 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG-------------------------------- 291 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc--------------------------------
Confidence 234478999999999888877766543 237777766544332110
Q ss_pred cccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc
Q 018916 192 KQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 269 (349)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~ 269 (349)
+ . ....+.+-.++.|+|++.|.+|..+ ...+++.+++..
T Consensus 292 p----------r-----------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA 332 (784)
T KOG3253|consen 292 P----------R-----------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA 332 (784)
T ss_pred c----------c-----------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc
Confidence 0 0 0111223455789999999999999 566668888775
Q ss_pred cceeEEEEcCCCCcccccC---------hhhHHHHHHHHHhhc
Q 018916 270 RYSALVEVQACGSMVTEEQ---------PHAMLIPMEYFLMGY 303 (349)
Q Consensus 270 ~~~~~~~i~~~gH~~~~e~---------p~~~~~~i~~fl~~~ 303 (349)
..+++++.+++|.+-... .++|...+.++|.++
T Consensus 333 -~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 333 -EVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred -cceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 478999999999877643 234555555555443
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.1e-06 Score=67.01 Aligned_cols=88 Identities=13% Similarity=0.006 Sum_probs=44.1
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHHcC
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ----IAEVLNHFG 117 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~----l~~~l~~l~ 117 (349)
.-.|||+||+.++...+.. +...... ....+.--.+...++.... ......++..++. +.+.++...
T Consensus 4 ~hLvV~vHGL~G~~~d~~~---~~~~l~~-~~~~~~~~~i~~~~~~~n~-----~~T~~gI~~~g~rL~~eI~~~~~~~~ 74 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRY---LKNHLEK-IPEDLPNARIVVLGYSNNE-----FKTFDGIDVCGERLAEEILEHIKDYE 74 (217)
T ss_pred CEEEEEeCCCCCCHHHHHH---HHHHHHH-hhhhcchhhhhhhcccccc-----cccchhhHHHHHHHHHHHHHhccccc
Confidence 4479999999999766411 1111111 1112221122222221010 0112345554444 444443333
Q ss_pred C--CcEEEEEechhHHHHHHHHH
Q 018916 118 L--GAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 118 ~--~~v~lvGhS~Gg~ia~~~a~ 138 (349)
. .++.+|||||||.++-.+..
T Consensus 75 ~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 75 SKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccccceEEEecccHHHHHHHHH
Confidence 3 48999999999999975544
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.5e-05 Score=67.77 Aligned_cols=106 Identities=8% Similarity=0.016 Sum_probs=61.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCC----eEEEEECCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN----FCIYHINPPGHE-FGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g----~~vi~~D~~G~G-~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
..|+|+++||-. |....--...+..+.++| .-|+.+|..+.. ++. ..+ ....-.+.+++++.-++++
T Consensus 208 ~~PvlyllDG~~-----w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~-el~--~~~~f~~~l~~eLlP~I~~ 279 (411)
T PRK10439 208 ERPLAILLDGQF-----WAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ-ELP--CNADFWLAVQQELLPQVRA 279 (411)
T ss_pred CCCEEEEEECHH-----hhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccc-cCC--chHHHHHHHHHHHHHHHHH
Confidence 458999998843 211110012233444444 345677763211 111 000 1111123344555555543
Q ss_pred -cC----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 116 -FG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 116 -l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
++ -++.+|+|+||||+.|+.++.++|+.+.+++.+++..
T Consensus 280 ~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 280 IAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred hCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 22 2568999999999999999999999999999999864
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.08 E-value=9.5e-05 Score=61.97 Aligned_cols=102 Identities=8% Similarity=0.093 Sum_probs=62.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL---NH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l---~~ 115 (349)
...|||+.||+|.+.... .+ ..+..++. .+..+.++. .|-|. .......+.+.++.+.+-+ +.
T Consensus 25 ~~~PvViwHGlgD~~~~~--~~---~~~~~~i~~~~~~pg~~v~-ig~~~------~~s~~~~~~~Qv~~vce~l~~~~~ 92 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG--KV---SNLTQFLINHSGYPGTCVE-IGNGV------QDSLFMPLRQQASIACEKIKQMKE 92 (306)
T ss_pred CCCCEEEECCCCcccCCc--hH---HHHHHHHHhCCCCCeEEEE-ECCCc------ccccccCHHHHHHHHHHHHhcchh
Confidence 345899999998554221 11 22345554 356555554 23221 1111234455555444444 23
Q ss_pred cCCCcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCC
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 155 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 155 (349)
+. +-++++|+|.||.++-.++.+.|+ .|+.+|.+++...
T Consensus 93 L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 93 LS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred hc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 33 459999999999999999999987 4999999887653
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.5e-05 Score=60.08 Aligned_cols=231 Identities=10% Similarity=0.058 Sum_probs=118.4
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH--------HHHHHH
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ--------IAEVLN 114 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~--------l~~~l~ 114 (349)
+.-+++-|-|.+ +++.++ .+....+.++...++++-|-+|.-.++ ..-...++ .+.| |.++.+
T Consensus 114 ~KOG~~a~tgdh--~y~rr~---~L~~p~~k~~i~tmvle~pfYgqr~p~---~q~~~~Le-~vtDlf~mG~A~I~E~~~ 184 (371)
T KOG1551|consen 114 DLCLSWALTGDH--VYTRRL---VLSKPINKREIATMVLEKPFYGQRVPE---EQIIHMLE-YVTDLFKMGRATIQEFVK 184 (371)
T ss_pred CeeEEEeecCCc--eeEeee---eecCchhhhcchheeeecccccccCCH---HHHHHHHH-HHHHHHHhhHHHHHHHHH
Confidence 444555444433 333332 344577788899999999999875421 11111111 1122 233332
Q ss_pred ------HcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHh
Q 018916 115 ------HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKR 188 (349)
Q Consensus 115 ------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (349)
..|..++.++|-||||.+|......++..|.-+=.+++.....+..+...... .. .+++
T Consensus 185 lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~-~s--------------~~~~ 249 (371)
T KOG1551|consen 185 LFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQD-TS--------------KMKR 249 (371)
T ss_pred hcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhh-hH--------------HHHh
Confidence 34568899999999999999888877766655444444332222111100000 00 0011
Q ss_pred hcccccccCCCC-CCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc-----eEEEEeCCCccc--hhH
Q 018916 189 YFSKQEVRGNAQ-VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-----SLIFVGESSPFH--SEA 260 (349)
Q Consensus 189 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vlii~g~~D~~~--~~~ 260 (349)
+........... .+........ +............+++.+.+ -...+.+..+| +.++.+++|..+ ...
T Consensus 250 ~~~~t~~~~~~~r~p~Q~~~~~~-~~~srn~~~E~~~~Mr~vmd---~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv 325 (371)
T KOG1551|consen 250 FNQTTNKSGYTSRNPAQSYHLLS-KEQSRNSRKESLIFMRGVMD---ECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGV 325 (371)
T ss_pred hccCcchhhhhhhCchhhHHHHH-HHhhhcchHHHHHHHHHHHH---hhchhhcCCCCCCCCeEEEEEecCCccccccCc
Confidence 110000000000 0011111111 11111222222222222221 11112222333 667889999988 466
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhcc
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 304 (349)
..+.+.+|+ +++..++ +||..-+ -+.+.+.++|.+-|+++.
T Consensus 326 ~~lQ~~WPg--~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 326 RSLQEIWPG--CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred HHHHHhCCC--CEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 678899998 9999997 8996544 778899999999998764
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.6e-05 Score=69.41 Aligned_cols=83 Identities=14% Similarity=0.110 Sum_probs=57.6
Q ss_pred CCeEEEEECCCCCCCCCCCC--C-CCCCCCCHHHHHHHHHHHHHHcC-------CCcEEEEEechhHHHHHHHHHhhhcc
Q 018916 74 HNFCIYHINPPGHEFGAAAI--S-DDEPVLSVDDLADQIAEVLNHFG-------LGAVMCMGVTAGAYILTLFAMKYRHR 143 (349)
Q Consensus 74 ~g~~vi~~D~~G~G~s~~~~--~-~~~~~~~~~~~~~~l~~~l~~l~-------~~~v~lvGhS~Gg~ia~~~a~~~p~~ 143 (349)
-|--|+++++|-+|.|.+-. + .+-...+.++..+|++.+++++. ..+++++|-|+||++|..+-.+||+.
T Consensus 58 ~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 58 FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 38899999999999997421 1 12345688888888888875543 24799999999999999999999999
Q ss_pred cceeEEecCCCCC
Q 018916 144 VLGLILVSPLCKA 156 (349)
Q Consensus 144 v~~lvl~~~~~~~ 156 (349)
|.+.+..+++...
T Consensus 138 ~~ga~ASSapv~a 150 (434)
T PF05577_consen 138 FDGAWASSAPVQA 150 (434)
T ss_dssp -SEEEEET--CCH
T ss_pred eEEEEeccceeee
Confidence 9999988877743
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0008 Score=53.92 Aligned_cols=79 Identities=10% Similarity=0.130 Sum_probs=50.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhh-hcCCeEE-EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCI-YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~-l~~g~~v-i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
++..|||.-|+|++... +. .+ +..++.| +++|+|-. .- .. + + -+.
T Consensus 10 ~~~LilfF~GWg~d~~~-f~---------hL~~~~~~D~l~~yDYr~l--~~----------d~-----~---~---~~y 56 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSP-FS---------HLILPENYDVLICYDYRDL--DF----------DF-----D---L---SGY 56 (213)
T ss_pred CCeEEEEEecCCCChHH-hh---------hccCCCCccEEEEecCccc--cc----------cc-----c---c---ccC
Confidence 45689999999988633 11 22 2346666 47788775 11 10 1 1 135
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
+++.|||+|||-.+|..+....| ++..+.+++..
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 89999999999999988766543 55555555544
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00095 Score=56.17 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=65.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---H
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN---H 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~---~ 115 (349)
...++|+.||+|.+.... .. ..+.+++.. |..++++.. | .+. .......+.+.++.+.+-++ .
T Consensus 24 ~~~P~ViwHG~GD~c~~~--g~---~~~~~l~~~~~g~~~~~i~i-g--~~~----~~s~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDA--TN---ANFTQLLTNLSGSPGFCLEI-G--NGV----GDSWLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCCeEEecCCCcccCCc--hH---HHHHHHHHhCCCCceEEEEE-C--CCc----cccceeCHHHHHHHHHHHHhhchh
Confidence 345799999998775431 11 223444433 566666654 3 231 12223455555555554443 3
Q ss_pred cCCCcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCC
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 155 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 155 (349)
+. +-++++|+|.||.++-.++.+.|+ .|+.+|.+++...
T Consensus 92 l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 92 LS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred hh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 32 459999999999999999999987 5999999886653
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.1e-05 Score=59.66 Aligned_cols=107 Identities=12% Similarity=0.109 Sum_probs=67.0
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCC-----eEEEEECCCCC----CCCCCCCCC-------CCCCCCHHHHH
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-----FCIYHINPPGH----EFGAAAISD-------DEPVLSVDDLA 106 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g-----~~vi~~D~~G~----G~s~~~~~~-------~~~~~~~~~~~ 106 (349)
-|.|||||.+++..+. . ..+.++...+ -=++.+|--|. |.=+.+... .....+..++.
T Consensus 46 iPTIfIhGsgG~asS~-~-----~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s 119 (288)
T COG4814 46 IPTIFIHGSGGTASSL-N-----GMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQS 119 (288)
T ss_pred cceEEEecCCCChhHH-H-----HHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHH
Confidence 3789999999887662 1 2223333322 23456666662 110100000 01234556667
Q ss_pred HHHHHHH----HHcCCCcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCC
Q 018916 107 DQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 155 (349)
Q Consensus 107 ~~l~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 155 (349)
..+..++ ++.++.++.++||||||.-...|+..+.. .++.+|.++..+.
T Consensus 120 ~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 120 KWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 6666665 55678999999999999999999987643 3888998888776
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00012 Score=68.04 Aligned_cols=111 Identities=17% Similarity=0.093 Sum_probs=66.7
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCC-CC-CCCCCCCCCCCCCCCHHHHHHHHH---HH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPP-GH-EFGAAAISDDEPVLSVDDLADQIA---EV 112 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~-G~-G~s~~~~~~~~~~~~~~~~~~~l~---~~ 112 (349)
+..|+||+|||.+......... . ...+... ++-|+.+++| |. |.-............+.|....+. +-
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~---~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~ 167 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--P---GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDN 167 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--C---hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 3468999999976543222110 1 1233333 3899999999 42 222111111122345566554443 33
Q ss_pred HHHcCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCC
Q 018916 113 LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (349)
Q Consensus 113 l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (349)
++.+|. ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 168 i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 168 IAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 445554 579999999999999887765 3456888888886554
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00066 Score=59.24 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=52.4
Q ss_pred hhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 237 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 237 ~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
....++++|.++|.|..|.+. +....+.+.+++ ...+..+||++|..-. ..+.+.|..|+..+
T Consensus 256 ~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 256 SYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred HHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 334567899999999999998 677789999997 5788999999998765 67778888888875
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00011 Score=57.37 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=69.4
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC--CCCCCC----------------CCCCHH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA--AISDDE----------------PVLSVD 103 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~--~~~~~~----------------~~~~~~ 103 (349)
-|++.++-|+..........-.|. ......|+.|+.+|---.|..-. +.+-+. ..|.+.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~q---q~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMY 120 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQ---QQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMY 120 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHH---HhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHH
Confidence 478999999888876653333331 24456799999999543331111 000000 123333
Q ss_pred HH-HHHHHHHHHH----cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 104 DL-ADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 104 ~~-~~~l~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
++ ++.+.+++.. +...++.+.||||||.=|+..+.+.|.+.+++-..+|-.+.
T Consensus 121 dYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 33 2344444431 23356899999999999999999999998888777765543
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00016 Score=67.29 Aligned_cols=109 Identities=15% Similarity=0.115 Sum_probs=62.8
Q ss_pred CCCeEEEecCCCCChhhhhc----------ccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQ----------GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~----------~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
++-+|+||+|..++...... .-..+.-........|+..++|+=+- .+ .....++.+.++-+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~t------Am~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FT------AMHGHILLDQTEYVN 160 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hh------hhccHhHHHHHHHHH
Confidence 56799999999888644311 00000111122234677788887552 01 112356677766655
Q ss_pred HHHHH----c-C--------CCcEEEEEechhHHHHHHHHHh---hhcccceeEEecCCCCC
Q 018916 111 EVLNH----F-G--------LGAVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCKA 156 (349)
Q Consensus 111 ~~l~~----l-~--------~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~ 156 (349)
+.++. . + ...|+++||||||++|...+.. .++.|.-++..+++...
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 54432 1 1 1239999999999999965542 34457777777765543
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.022 Score=51.54 Aligned_cols=137 Identities=10% Similarity=0.040 Sum_probs=77.1
Q ss_pred CCCceeEEeCC---CeeEEEEEccC----CCCCeEEEecCCCCChhhh--hc---ccccch--------h---hhhhhcC
Q 018916 18 PSGKDNLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSC--FQ---GLFFCP--------E---ACSLLLH 74 (349)
Q Consensus 18 ~~~~~~~i~~~---~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~--~~---~~~~~~--------~---~~~~l~~ 74 (349)
+....=+++++ +..+.|..... ...|.|+.+-|.++.++.. +. ++.... . -..-..+
T Consensus 35 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~ 114 (433)
T PLN03016 35 FELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK 114 (433)
T ss_pred eeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh
Confidence 33334455553 34677765442 3678999999887665422 11 110000 0 0011134
Q ss_pred CeEEEEEC-CCCCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhh-------
Q 018916 75 NFCIYHIN-PPGHEFGAAAISDDEPVLSV---DDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKY------- 140 (349)
Q Consensus 75 g~~vi~~D-~~G~G~s~~~~~~~~~~~~~---~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~------- 140 (349)
..+++-+| .-|.|.|-...... ...+. +++.+.+..+++.. ...+++|+|.|+||..+-.+|..-
T Consensus 115 ~anllfiDqPvGtGfSy~~~~~~-~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~ 193 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTPID-KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 193 (433)
T ss_pred cCcEEEecCCCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccc
Confidence 57899999 77899886432211 11122 34444444444332 346899999999998777766532
Q ss_pred ---hcccceeEEecCCCC
Q 018916 141 ---RHRVLGLILVSPLCK 155 (349)
Q Consensus 141 ---p~~v~~lvl~~~~~~ 155 (349)
+-.++|+++-++...
T Consensus 194 ~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 194 CEPPINLQGYMLGNPVTY 211 (433)
T ss_pred cCCcccceeeEecCCCcC
Confidence 124778888887654
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00028 Score=50.02 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=52.0
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
..|+|++.++.|+.. +.++.+.+.+++ ++++.+++.||......-.-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999999 788889999998 99999999999988755567889999999843
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0075 Score=54.58 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=75.5
Q ss_pred ceeEEeCC---CeeEEEEEccC----CCCCeEEEecCCCCChhhh--hc---ccccchh-----------hhhhhcCCeE
Q 018916 21 KDNLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSC--FQ---GLFFCPE-----------ACSLLLHNFC 77 (349)
Q Consensus 21 ~~~~i~~~---~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~--~~---~~~~~~~-----------~~~~l~~g~~ 77 (349)
..-++.++ +..+.|..... ...|+|+.+-|.++.++.. +. ++..... -.....+-.+
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 33345543 34576665442 3578999999987665443 11 1100000 0011234678
Q ss_pred EEEEC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----Hc---CCCcEEEEEechhHHHHHHHHHhh---------
Q 018916 78 IYHIN-PPGHEFGAAAISDDEPVLSVDDLADQIAEVLN----HF---GLGAVMCMGVTAGAYILTLFAMKY--------- 140 (349)
Q Consensus 78 vi~~D-~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~----~l---~~~~v~lvGhS~Gg~ia~~~a~~~--------- 140 (349)
++-+| ..|.|.|-...... ..+-++.++++.++++ .. ...+++|.|.|+||..+-.+|..-
T Consensus 120 llfiDqPvGtGfSy~~~~~~--~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIE--RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred EEEecCCCCCCccCCCCCCC--ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 99999 77889885332211 1122233455555443 32 235899999999998777766532
Q ss_pred -hcccceeEEecCCCCC
Q 018916 141 -RHRVLGLILVSPLCKA 156 (349)
Q Consensus 141 -p~~v~~lvl~~~~~~~ 156 (349)
+-.++|+++.++....
T Consensus 198 ~~inl~Gi~igng~td~ 214 (437)
T PLN02209 198 PPINLQGYVLGNPITHI 214 (437)
T ss_pred CceeeeeEEecCcccCh
Confidence 1246788888876643
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00066 Score=60.45 Aligned_cols=112 Identities=16% Similarity=0.089 Sum_probs=70.7
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCC-eEEEEECCCC--CCCCCCC-CC---CCCCCCCHHHHHH---HHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPG--HEFGAAA-IS---DDEPVLSVDDLAD---QIA 110 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g-~~vi~~D~~G--~G~s~~~-~~---~~~~~~~~~~~~~---~l~ 110 (349)
+.|++|+|||.+....+..... + + -..+.++| +-|+++++|= .|.=+-+ .. .......+.|++. .+.
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~-y-d-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPL-Y-D-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CCcEEEEEeccccccCCCcccc-c-C-hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 4599999999876655544443 2 2 24666777 8888888763 2211100 00 0011245555554 445
Q ss_pred HHHHHcCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCC
Q 018916 111 EVLNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (349)
Q Consensus 111 ~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (349)
+-++++|. ++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 55677775 569999999999999876653 2345888888888775
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0042 Score=57.24 Aligned_cols=113 Identities=16% Similarity=0.123 Sum_probs=77.7
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD----DEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~----~~~~~~~~~~~~~l~~~l~~ 115 (349)
...|.+|.-=|.-+. + .... +......++.+||-.-...-||=|.-...+-. .....++.|+.+....+++.
T Consensus 446 g~~p~lLygYGaYG~--s-~~p~-Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~ 521 (682)
T COG1770 446 GSAPLLLYGYGAYGI--S-MDPS-FSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKE 521 (682)
T ss_pred CCCcEEEEEeccccc--c-CCcC-cccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHc
Confidence 355666655443222 2 2222 12334578899998888889997654432211 12346889998888887753
Q ss_pred -cC-CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 116 -FG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 116 -l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
.+ .+.++++|-|.||++....+...|+.++++|+--|+...
T Consensus 522 g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 522 GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 22 257999999999999999999999999999988887764
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00022 Score=63.73 Aligned_cols=81 Identities=9% Similarity=0.069 Sum_probs=53.1
Q ss_pred cchhhhhhhcCCeEE----E-E-ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cCCCcEEEEEechhHHHHH
Q 018916 64 FCPEACSLLLHNFCI----Y-H-INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FGLGAVMCMGVTAGAYILT 134 (349)
Q Consensus 64 ~~~~~~~~l~~g~~v----i-~-~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~ 134 (349)
|...+..+.+.||.. . + +|+|-- . ...+++...+..+++. ...++|+|+||||||.++.
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~---~---------~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~ 134 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLS---P---------AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVAR 134 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhc---h---------hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHH
Confidence 556666666656643 2 2 677653 1 1233444444444422 2258999999999999999
Q ss_pred HHHHhhhc------ccceeEEecCCCCC
Q 018916 135 LFAMKYRH------RVLGLILVSPLCKA 156 (349)
Q Consensus 135 ~~a~~~p~------~v~~lvl~~~~~~~ 156 (349)
.+....+. .|+++|.++++...
T Consensus 135 ~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 135 YFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 99887643 49999999987753
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.039 Score=48.02 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=44.5
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhc------------c----------cc-eeEEEEcCCCCcccccChhhHHHHHH
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKID------------R----------RY-SALVEVQACGSMVTEEQPHAMLIPME 297 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~------------~----------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 297 (349)
.++||+..|..|.++ ...+.+.+.+. + .+ .++..+.++||++. .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 489999999999887 33344444433 1 11 45677779999996 69999999999
Q ss_pred HHHhhc
Q 018916 298 YFLMGY 303 (349)
Q Consensus 298 ~fl~~~ 303 (349)
.|++..
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999763
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00082 Score=60.97 Aligned_cols=132 Identities=11% Similarity=0.054 Sum_probs=83.9
Q ss_pred CCCCceeEEeC-CCeeEEEEEcc-C---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC
Q 018916 17 PPSGKDNLIKT-SHGSLSVTIYG-D---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 17 ~~~~~~~~i~~-~~~~l~~~~~g-~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
++..++.+... +|.+|.|.+.+ . ..+|++|+ |.|+-..+... . +...+...+++|...+.-+.||=|+=.+
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~--aYGGF~vsltP-~-fs~~~~~WLerGg~~v~ANIRGGGEfGp 466 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLY--AYGGFNISLTP-R-FSGSRKLWLERGGVFVLANIRGGGEFGP 466 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEE--eccccccccCC-c-cchhhHHHHhcCCeEEEEecccCCccCH
Confidence 33344455444 77789887764 1 23566664 44444333222 2 2244578889999999999999875443
Q ss_pred CCCC----CCCCCCHHHHHHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 92 AISD----DEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 92 ~~~~----~~~~~~~~~~~~~l~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
.+.. ......++|+++-..++++. |+ +++.+.|-|=||.+.-....++|+.+.+++.--|.
T Consensus 467 ~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 467 EWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred HHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 2211 11234566666666666543 33 56889999999999998888999988877754443
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0074 Score=52.68 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=78.0
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-- 117 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-- 117 (349)
.++|+|+.--|.+.+... .......++ +-+-+.+++|-+|.|.+. +.+....++++-+.|...+++.+.
T Consensus 61 ~drPtV~~T~GY~~~~~p------~r~Ept~Ll--d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP------RRSEPTQLL--DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred CCCCeEEEecCcccccCc------cccchhHhh--ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhh
Confidence 578999998887654321 112223444 347789999999988753 455667899999999998887764
Q ss_pred -CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 118 -LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 118 -~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
.++.+--|-|=||+.++.+=.-||+.|++.|---.+
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 367888899999999998888899999987754433
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0052 Score=52.64 Aligned_cols=70 Identities=20% Similarity=0.198 Sum_probs=50.1
Q ss_pred ChhhhccccC-CceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChh---hHHHHHHHHHhhc
Q 018916 234 DISEGLRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH---AMLIPMEYFLMGY 303 (349)
Q Consensus 234 ~~~~~l~~i~-~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 303 (349)
+....+.++. +|+++++|.+|.++ .....+.+.......+...+++++|........ +..+.+.+|+.+.
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3344445555 79999999999998 455566666554346778888999988864443 6778888888764
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00075 Score=58.38 Aligned_cols=107 Identities=18% Similarity=0.161 Sum_probs=67.8
Q ss_pred CeEEEecCCCCChhhh--hcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHH
Q 018916 43 PALVTYPDLALNYMSC--FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD------DEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~--~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~------~~~~~~~~~~~~~l~~~l~ 114 (349)
.+|+|--|.-++-... -..++| +.. -+.+--++-.++|-+|+|-+--.. .-...+.++--+|.++++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~-D~A---p~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMW-DLA---PELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHH-hhh---HhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 5688887765543221 234455 221 133667889999999998642111 1112344444445555554
Q ss_pred HcC------CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 115 HFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 115 ~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
.+. ..+|+.+|-|+||++|..+=.+||+.|.|.+..+.+
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 442 257999999999999999999999988887665543
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.002 Score=50.65 Aligned_cols=114 Identities=10% Similarity=0.065 Sum_probs=67.9
Q ss_pred CCCeEEEecCCCCChhh-hhcccc---------cchhhhhhhcCCeEEEEECCCC---CCCCCCCCCCCCCCCCHHHHHH
Q 018916 41 DKPALVTYPDLALNYMS-CFQGLF---------FCPEACSLLLHNFCIYHINPPG---HEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~-~~~~~~---------~~~~~~~~l~~g~~vi~~D~~G---~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
....+|+|||.|.-..+ |-.++. --+.+....+.||.|++.+.-- +-.+.. .+. ....+..+.+.
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~-np~-kyirt~veh~~ 177 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKR-NPQ-KYIRTPVEHAK 177 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhccc-Ccc-hhccchHHHHH
Confidence 44589999997654322 211110 0134556667899999987531 111110 011 11123333333
Q ss_pred H-HHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCCC
Q 018916 108 Q-IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 156 (349)
Q Consensus 108 ~-l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 156 (349)
- ...++.....+.+.++.||+||...+.+..++|+ +|.++.|-+.+...
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 2 2334445566889999999999999999999885 57777777776443
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00092 Score=51.41 Aligned_cols=54 Identities=17% Similarity=0.248 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHH----cCCCcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCC
Q 018916 103 DDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKA 156 (349)
Q Consensus 103 ~~~~~~l~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 156 (349)
..+.+.+...++. ....+++++|||+||.+|..++..... .+..++..+++...
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 3444444444433 356789999999999999998887765 45666666665543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.016 Score=48.03 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=71.4
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
.|.|+++-.+.++........ .+.+-....|+.-|+-.- .--+ -......++|+.+-+.+++..+|.+ +
T Consensus 103 dPkvLivapmsGH~aTLLR~T------V~alLp~~~vyitDW~dA--r~Vp--~~~G~FdldDYIdyvie~~~~~Gp~-~ 171 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGT------VEALLPYHDVYITDWVDA--RMVP--LEAGHFDLDDYIDYVIEMINFLGPD-A 171 (415)
T ss_pred CCeEEEEecccccHHHHHHHH------HHHhccccceeEeecccc--ceee--cccCCccHHHHHHHHHHHHHHhCCC-C
Confidence 457777777777765533322 344455678999998765 2222 2345689999999999999999954 7
Q ss_pred EEEEechhH-----HHHHHHHHhhhcccceeEEecCCCCC
Q 018916 122 MCMGVTAGA-----YILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 122 ~lvGhS~Gg-----~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
++++.+.-+ .+++.-+...|..-..+++++++...
T Consensus 172 hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 172 HVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 777777543 44444444567778899999988754
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=49.48 Aligned_cols=92 Identities=9% Similarity=0.149 Sum_probs=61.8
Q ss_pred EEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEE
Q 018916 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (349)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lv 124 (349)
||.+||+-++..+--. ....++++. |.|-++.+.+ .........++.+..++..++.+...++
T Consensus 2 ilYlHGFnSSP~shka-----~l~~q~~~~-------~~~~i~y~~p-----~l~h~p~~a~~ele~~i~~~~~~~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKA-----VLLLQFIDE-------DVRDIEYSTP-----HLPHDPQQALKELEKAVQELGDESPLIV 64 (191)
T ss_pred eEEEecCCCCcccHHH-----HHHHHHHhc-------cccceeeecC-----CCCCCHHHHHHHHHHHHHHcCCCCceEE
Confidence 8999999765433111 112233333 3333333432 1236788899999999999987889999
Q ss_pred EechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 125 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
|-|+||+.|.+++.++. ++. |+++|....
T Consensus 65 GssLGGY~At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 65 GSSLGGYYATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred eecchHHHHHHHHHHhC--Chh-hhcCCCcCc
Confidence 99999999999998873 444 456776654
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=49.84 Aligned_cols=40 Identities=18% Similarity=0.314 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
.+.+.+.+.++++.....++++.|||+||.+|..++....
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 3455666777667766678999999999999998887643
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0091 Score=48.89 Aligned_cols=100 Identities=12% Similarity=0.140 Sum_probs=62.5
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--C
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG--L 118 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~--~ 118 (349)
-++|++||++....+... ..+.+++. .|..|++.|. |-| . .+.....+.+.++.+.+.++... .
T Consensus 24 ~P~ii~HGigd~c~~~~~-----~~~~q~l~~~~g~~v~~lei-g~g--~----~~s~l~pl~~Qv~~~ce~v~~m~~ls 91 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSM-----ANLTQLLEELPGSPVYCLEI-GDG--I----KDSSLMPLWEQVDVACEKVKQMPELS 91 (296)
T ss_pred CCEEEEeccCcccccchH-----HHHHHHHHhCCCCeeEEEEe-cCC--c----chhhhccHHHHHHHHHHHHhcchhcc
Confidence 468999999887654211 12234443 4888999987 333 1 11222344555554444443211 1
Q ss_pred CcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLC 154 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 154 (349)
+-++++|.|.||.++-.++...++ .|+.+|-++++.
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 458999999999999998887654 488888777654
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0006 Score=56.78 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=54.4
Q ss_pred CCCCeEEEecCCCCChhhh--hcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 018916 40 QDKPALVTYPDLALNYMSC--FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-- 115 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~--~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~-- 115 (349)
+...|||+.||+|.+.... .... ....+..-.|-.|++++.-.....+. .......+.+.++.+.+.++.
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i---~~~i~~~~PG~yV~si~ig~~~~~D~---~~s~f~~v~~Qv~~vc~~l~~~p 76 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSI---KELIEEQHPGTYVHSIEIGNDPSEDV---ENSFFGNVNDQVEQVCEQLANDP 76 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHH---HHHHHHHSTT--EEE--SSSSHHHHH---HHHHHSHHHHHHHHHHHHHHH-G
T ss_pred CCCCcEEEEEcCccccCChhHHHHH---HHHHHHhCCCceEEEEEECCCcchhh---hhhHHHHHHHHHHHHHHHHhhCh
Confidence 3445899999998764211 1111 11122223588888888732211110 001113445555556555543
Q ss_pred -cCCCcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCCC
Q 018916 116 -FGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (349)
Q Consensus 116 -l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 155 (349)
+. +-++++|+|.||.++-.++.+.|+ .|+.+|.+++...
T Consensus 77 ~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 77 ELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp GGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred hhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 22 469999999999999999999875 5999999886653
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0036 Score=53.82 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=43.0
Q ss_pred CCHHHH-HHHHHHHH-HHcCC----CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 100 LSVDDL-ADQIAEVL-NHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 100 ~~~~~~-~~~l~~~l-~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
+.++++ .+++-+.+ +++.. +...++||||||.=|+.+|+++|+++..+.-.++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 555554 34555344 34432 267899999999999999999999999998888877654
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.021 Score=52.62 Aligned_cols=134 Identities=15% Similarity=0.055 Sum_probs=87.6
Q ss_pred CCceeEEeCCCe-eEE----EEEcc--CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC
Q 018916 19 SGKDNLIKTSHG-SLS----VTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 19 ~~~~~~i~~~~~-~l~----~~~~g--~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
..+++++...+| .+. |...- .+++|.+|..+|.-+-+. .. .|...-..++..|+-....|.||=|.-..
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl---~p-~f~~srl~lld~G~Vla~a~VRGGGe~G~ 515 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISL---DP-SFRASRLSLLDRGWVLAYANVRGGGEYGE 515 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceee---cc-ccccceeEEEecceEEEEEeeccCccccc
Confidence 345666666444 332 22111 136777777666533221 11 24444456778898888889999886554
Q ss_pred CCCCCC----CCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 92 AISDDE----PVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 92 ~~~~~~----~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
.+..+. ...+++|+...+..+++. ..-.+..+.|.|.||.++..++.++|+.+.++|+--|....
T Consensus 516 ~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 516 QWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred chhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 433222 245788888777777753 12357899999999999999999999999998876665543
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0069 Score=56.91 Aligned_cols=112 Identities=18% Similarity=0.062 Sum_probs=63.4
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCCCCCCCCCCC-CCCCHHHHHHHHHH---HHHH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDE-PVLSVDDLADQIAE---VLNH 115 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~~~~~~~~-~~~~~~~~~~~l~~---~l~~ 115 (349)
.|++|+|||.+....+..... + ........++.-|+.+.+|= +|.-........ ..+.+.|+...+.= -+..
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~-~-~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPP-Y-DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGG-G-HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGG
T ss_pred cceEEEeecccccCCCccccc-c-cccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhh
Confidence 589999999866644331111 1 22233456799999999873 221111111111 45677777655443 3445
Q ss_pred cCC--CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCC
Q 018916 116 FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (349)
Q Consensus 116 l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (349)
+|. ++|.|+|||.||..+...+..- ...++++|+.++...
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred cccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 554 5699999999999988766642 346999999998543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0061 Score=53.42 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=30.8
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999998876555443
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0039 Score=51.54 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=29.1
Q ss_pred HHHcCCCcEEEEEechhHHHHHHHHHhhh-----cccceeEEecCCCC
Q 018916 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLCK 155 (349)
Q Consensus 113 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~ 155 (349)
++.....++++.|||+||.+|..++.... ..+..+.+-+|...
T Consensus 122 ~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 122 LKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 33334567999999999999998887543 33555555555443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.033 Score=43.54 Aligned_cols=122 Identities=17% Similarity=0.096 Sum_probs=66.1
Q ss_pred EEEccCC--CCCeEEEecCCCCChhhhhccccc-----chhhhhh---hcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 34 VTIYGDQ--DKPALVTYPDLALNYMSCFQGLFF-----CPEACSL---LLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 34 ~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~-----~~~~~~~---l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
....|+. ...+.++++|.+.+-........- ...+... ...+-+|-++-+.|+-.-...........--+
T Consensus 9 ava~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~ 88 (177)
T PF06259_consen 9 AVAVGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYAR 88 (177)
T ss_pred EEEECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHH
Confidence 3455654 345889999987664332111000 0000111 12233555555555511000000111112234
Q ss_pred HHHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 104 DLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 104 ~~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+-+.++..|++.|. -.++.++|||+|+.++-..+...+..++.+++++++..
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 55566666665553 24689999999999999777765778999999887654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0068 Score=49.53 Aligned_cols=50 Identities=10% Similarity=0.178 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh----hcccceeEEecCCCCC
Q 018916 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKA 156 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~ 156 (349)
++-+..+++..+ +++++.|||.||.+|...|... .++|.++...+++...
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 344455555554 4699999999999999887763 3578888877776544
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.018 Score=51.54 Aligned_cols=115 Identities=11% Similarity=0.045 Sum_probs=79.2
Q ss_pred CCCCCeEEEecCCCCChhhh--hcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHH
Q 018916 39 DQDKPALVTYPDLALNYMSC--FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD---DEPVLSVDDLADQIAEVL 113 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~--~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~---~~~~~~~~~~~~~l~~~l 113 (349)
.+++|..++|-|=|.-...| .....| +....+-|-.|+..++|-+|.|.+.... +-...+.+....|+++++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~---~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTW---LQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFI 159 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchH---HHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHH
Confidence 45788888886644443223 222212 2233345899999999999988532111 122356677777888888
Q ss_pred HHcCC-------CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 114 NHFGL-------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 114 ~~l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
++++. .+.+.+|-|+-|.++..+=.+||+.+-+.|..+.+...
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 76542 28999999999999999999999999998887776643
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0046 Score=56.73 Aligned_cols=88 Identities=9% Similarity=0.011 Sum_probs=51.8
Q ss_pred cchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HcCCCcEEEEEechhHHHHHHHHHh
Q 018916 64 FCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN----HFGLGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 64 ~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~----~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
|...+..+...||. -.|+.|....-+- +. .....-+++-..+..+++ .-+.++|+|+||||||.+++.+...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRl-s~-~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRL-SF-QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeeccccccc-Cc-cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 56777777777886 4455554321110 00 001122334344444443 3345899999999999999998763
Q ss_pred hh---------------cccceeEEecCCCC
Q 018916 140 YR---------------HRVLGLILVSPLCK 155 (349)
Q Consensus 140 ~p---------------~~v~~lvl~~~~~~ 155 (349)
.. ..|+++|.++++..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 21 23788998888754
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0069 Score=49.93 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=34.7
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
-++-.++|||+||.+++.....+|+.+...++++|....
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 356899999999999999999999999999999987543
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.012 Score=51.96 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=24.2
Q ss_pred HHHHHHHHHHcCCCc--EEEEEechhHHHHHHHHHh
Q 018916 106 ADQIAEVLNHFGLGA--VMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~--v~lvGhS~Gg~ia~~~a~~ 139 (349)
...+..+++.....+ +++.|||+||.+|+..|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 334445555544344 9999999999999988764
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0087 Score=37.82 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=21.7
Q ss_pred CCCCCceeEEeCCCe-eEEEEEc--cC------CCCCeEEEecCCCCChhhh
Q 018916 16 PPPSGKDNLIKTSHG-SLSVTIY--GD------QDKPALVTYPDLALNYMSC 58 (349)
Q Consensus 16 ~~~~~~~~~i~~~~~-~l~~~~~--g~------~~~p~vv~lHG~~~~~~~~ 58 (349)
..+..+++.|.|++| .+..... +. ..+|+|+|.||+..++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 445678899999665 4444322 22 3578999999999998764
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.019 Score=51.36 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
...++.+.+.+++......++++.|||+||.+|..+|.
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34555666677776666678999999999999998765
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0065 Score=53.87 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=59.1
Q ss_pred ccchhhhhhhcCCeE----E--EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHH
Q 018916 63 FFCPEACSLLLHNFC----I--YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLF 136 (349)
Q Consensus 63 ~~~~~~~~~l~~g~~----v--i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~ 136 (349)
+|+..+..+..-||. + ..+|+|=.=. ..+..+..+..+...|+...+..|.++|+|++|||||.+.+.+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~-----~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYH-----NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccC-----ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 366666666665665 3 4677775210 1222335666666666666677777999999999999999999
Q ss_pred HHhhhc--------ccceeEEecCCC
Q 018916 137 AMKYRH--------RVLGLILVSPLC 154 (349)
Q Consensus 137 a~~~p~--------~v~~lvl~~~~~ 154 (349)
...+++ .|++++.++.+.
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCchh
Confidence 988776 266777666544
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.02 Score=50.70 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHh
Q 018916 103 DDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+++.+++..+++....+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45566677777665433 68999999999999988764
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.028 Score=50.44 Aligned_cols=38 Identities=13% Similarity=0.261 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
...++.+.+.++++.....++++.|||+||.+|..+|.
T Consensus 266 ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34456677788887777678999999999999998775
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.023 Score=45.43 Aligned_cols=68 Identities=10% Similarity=0.029 Sum_probs=45.2
Q ss_pred cCCeEEEEECCCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHhh
Q 018916 73 LHNFCIYHINPPGHEFGAA-----AISDDEPVLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 73 ~~g~~vi~~D~~G~G~s~~-----~~~~~~~~~~~~~~~~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
..-.+|+++=+|-.....- ............|..+....+|++.+. ++++|+|||.|+.+..++...+
T Consensus 43 ~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 43 NGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4456777777665421110 000111234567777788888888865 5899999999999999998764
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.025 Score=46.16 Aligned_cols=104 Identities=12% Similarity=0.015 Sum_probs=57.0
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC----
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL---- 118 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~---- 118 (349)
.+|=|+-|..... +....|......+.++||.|++.-+.- |..- ......-.+.+-..+..+.+.-+.
T Consensus 18 gvihFiGGaf~ga---~P~itYr~lLe~La~~Gy~ViAtPy~~-tfDH----~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 18 GVIHFIGGAFVGA---APQITYRYLLERLADRGYAVIATPYVV-TFDH----QAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEEcCcceecc---CcHHHHHHHHHHHHhCCcEEEEEecCC-CCcH----HHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 3566665543222 333334455677778999999887633 1100 000001112222222222222222
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
-+++-+|||+|+-+-+.+...++..-++-++++-..
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 367889999999999988777765556777776543
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.58 Score=46.89 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=63.9
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (349)
...|+++|+|.+-+.... .+.+.... ..|.+|.-- ....+..++++.+.-...-++++. .
T Consensus 2121 se~~~~Ffv~pIEG~tt~-----------l~~la~rl-----e~PaYglQ~---T~~vP~dSies~A~~yirqirkvQP~ 2181 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTA-----------LESLASRL-----EIPAYGLQC---TEAVPLDSIESLAAYYIRQIRKVQPE 2181 (2376)
T ss_pred ccCCceEEEeccccchHH-----------HHHHHhhc-----CCcchhhhc---cccCCcchHHHHHHHHHHHHHhcCCC
Confidence 477899999987544322 12223322 345555322 123345688888887777776665 3
Q ss_pred CcEEEEEechhHHHHHHHHHhhh--cccceeEEecCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCK 155 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~ 155 (349)
.++.++|.|+|+.++.++|.... +....+|+++..+.
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 68999999999999999987543 33566898887664
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.076 Score=41.87 Aligned_cols=77 Identities=14% Similarity=0.106 Sum_probs=45.1
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh------hhccc
Q 018916 75 NFCIYHINPPGHEFGAAAISDDEPVLSV----DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK------YRHRV 144 (349)
Q Consensus 75 g~~vi~~D~~G~G~s~~~~~~~~~~~~~----~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~------~p~~v 144 (349)
...+..+++|-..... ....+. .++.+.+.+....-...+++|+|+|.|+.++..++.. ..++|
T Consensus 39 ~~~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I 112 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRI 112 (179)
T ss_dssp EEEEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHE
T ss_pred eeEEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhE
Confidence 4566777777753210 011122 3334444444444445689999999999999998876 44679
Q ss_pred ceeEEecCCCCCC
Q 018916 145 LGLILVSPLCKAP 157 (349)
Q Consensus 145 ~~lvl~~~~~~~~ 157 (349)
.++++++-+....
T Consensus 113 ~avvlfGdP~~~~ 125 (179)
T PF01083_consen 113 AAVVLFGDPRRGA 125 (179)
T ss_dssp EEEEEES-TTTBT
T ss_pred EEEEEecCCcccC
Confidence 9999998766543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.041 Score=48.06 Aligned_cols=36 Identities=28% Similarity=0.425 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHhh
Q 018916 105 LADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 105 ~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+.+.+..+++....+ ++++.|||+||.+|...|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 345566666665533 489999999999999877654
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.065 Score=46.78 Aligned_cols=68 Identities=13% Similarity=0.210 Sum_probs=49.7
Q ss_pred hhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----cCCCcEEEEEechhHHHHHHHHHhhh
Q 018916 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 66 ~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
+....+.++|+.|+.+|-.-+=.|. .+.++.++|+..+++. .+..++.|+|+|+|+=+.-....+.|
T Consensus 278 ~v~~~l~~~gvpVvGvdsLRYfW~~---------rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 278 EVAEALQKQGVPVVGVDSLRYFWSE---------RTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHHHCCCceeeeehhhhhhcc---------CCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 3445566789999999965553332 5778888888888754 46689999999999998776555544
Q ss_pred c
Q 018916 142 H 142 (349)
Q Consensus 142 ~ 142 (349)
.
T Consensus 349 ~ 349 (456)
T COG3946 349 P 349 (456)
T ss_pred H
Confidence 3
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.045 Score=49.57 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
...+...+..+++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456667777777776678999999999999998875
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.091 Score=45.72 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=33.1
Q ss_pred cCCCcEEEEEechhHHHHHHHHHhhhcc-----cceeEEecCCCCCC
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMKYRHR-----VLGLILVSPLCKAP 157 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-----v~~lvl~~~~~~~~ 157 (349)
.|.+||.|+|||+|+.+...++....++ |+.+++++.+....
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 4667899999999999999877655443 88999998766553
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.088 Score=46.68 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHh
Q 018916 105 LADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 105 ~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+.+.+..+++....+ +|++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344566666665432 58999999999999987754
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.14 Score=46.14 Aligned_cols=113 Identities=17% Similarity=0.163 Sum_probs=67.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhh------------hhhhcCCeEEEEEC-CCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEA------------CSLLLHNFCIYHIN-PPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~------------~~~l~~g~~vi~~D-~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
++|.|+.+-|.++.++.+-.-.-..+.. ..-....-.++-+| .-|.|.|... .+....++....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~--~~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRAL--GDEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccc--ccccccchhccch
Confidence 6889999999988776541100000000 01112234788999 7789988742 2222344455555
Q ss_pred HHHHHHH-------HcC--CCcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCC
Q 018916 108 QIAEVLN-------HFG--LGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCK 155 (349)
Q Consensus 108 ~l~~~l~-------~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 155 (349)
|+..+.+ ++. ..+.+|+|-|+||.-+..+|..--+ ..++++++.+...
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 5444432 222 2589999999999999988875444 2566666665443
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.077 Score=48.10 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhh
Q 018916 104 DLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
++.+.+..+++.... .++++.|||+||.+|...|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344455666665543 2689999999999999877643
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.078 Score=46.94 Aligned_cols=37 Identities=14% Similarity=0.288 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHHh
Q 018916 103 DDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+++.+.+..+++.+. ..++++.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344455666665542 1368999999999999987754
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.09 E-value=3.8 Score=35.91 Aligned_cols=216 Identities=13% Similarity=0.096 Sum_probs=107.6
Q ss_pred hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHH-H---hh-h
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFA-M---KY-R 141 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a-~---~~-p 141 (349)
.-+.++|+.++-+-.|-+-..- .......+......-+.++++..+ ..++++--.|+||...+... . ++ |
T Consensus 60 ~~Yq~~g~~~~~~tap~~~~~~---~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~ 136 (350)
T KOG2521|consen 60 KIYQDKGYIVVRITAPCPSVFL---SASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEP 136 (350)
T ss_pred HHHhcCCceEEEecCccccccc---ccccccchhhHHHHHHHHHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcCc
Confidence 4455779999988888773221 223344667777778888887766 45677778899998777543 1 12 2
Q ss_pred ---cccceeEEecCCCCCCC-hhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc
Q 018916 142 ---HRVLGLILVSPLCKAPS-WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER 217 (349)
Q Consensus 142 ---~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (349)
+.+.+++..+.+..... ...+..... .....-.+.+...-+.. ..... .........+...+...
T Consensus 137 ~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~--------~~~~~~~~~~~~~~~~i-~~~~~--~~~~~~~~~~~~~~~~~ 205 (350)
T KOG2521|consen 137 KAAQLSGGIIFDSAPARSSPVQLGWAVSFS--------SPPDDYVARWARLNYHI-TLLTM--AGNEGGAYLLGPLAEKI 205 (350)
T ss_pred hhHhhcCCceEeccccccchhhhcceeccc--------cCchhhHHHHHhcCeEE-EEEEe--eecccchhhhhhhhhcc
Confidence 23556666655443211 111100000 00000000000000000 00000 00000001111111111
Q ss_pred cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccc--eeEEEEcCCCCcccc-cChhhH
Q 018916 218 QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQACGSMVTE-EQPHAM 292 (349)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~-e~p~~~ 292 (349)
.......++..+ .+.-.....+.+.+.+..|.++ +..+++.+.....+ ++-+.+.++-|..+. ..|..+
T Consensus 206 ~~~r~~~~~~r~------~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y 279 (350)
T KOG2521|consen 206 SMSRKYHFLDRY------EEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTY 279 (350)
T ss_pred ccccchHHHHHH------HhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHH
Confidence 111111111111 1111222467888889999998 45555544444322 666677789998888 789999
Q ss_pred HHHHHHHHhhcc
Q 018916 293 LIPMEYFLMGYG 304 (349)
Q Consensus 293 ~~~i~~fl~~~~ 304 (349)
.+...+|++...
T Consensus 280 ~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 280 LKKCSEFLRSVI 291 (350)
T ss_pred HHHHHHHHHhcc
Confidence 999999999874
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.092 Score=47.83 Aligned_cols=36 Identities=14% Similarity=0.261 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHcCC-----CcEEEEEechhHHHHHHHHHh
Q 018916 104 DLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
++.+.+..+++.+.. .+|++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344455666665532 479999999999999988753
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.14 Score=46.49 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHcCC-----CcEEEEEechhHHHHHHHHHh
Q 018916 105 LADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 105 ~~~~l~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+.+.+..+++.+.. .++.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44455556655532 369999999999999987754
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.17 Score=46.10 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHHh
Q 018916 104 DLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 104 ~~~~~l~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
++.+++..+++.+. ..++++.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34456667776553 1358999999999999987754
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.86 E-value=2.2 Score=32.42 Aligned_cols=77 Identities=8% Similarity=0.084 Sum_probs=47.8
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEE-EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI-YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~v-i~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
..||..-|+|..... +..+ .+.+++.+ +++|++.... +.++.. .+.+
T Consensus 12 ~LIvyFaGwgtpps~-v~HL--------ilpeN~dl~lcYDY~dl~l----------dfDfsA-------------y~hi 59 (214)
T COG2830 12 HLIVYFAGWGTPPSA-VNHL--------ILPENHDLLLCYDYQDLNL----------DFDFSA-------------YRHI 59 (214)
T ss_pred EEEEEEecCCCCHHH-Hhhc--------cCCCCCcEEEEeehhhcCc----------ccchhh-------------hhhh
Confidence 378888888877633 2211 23445554 6889877621 122221 2456
Q ss_pred EEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
-||++|||-.+|-++....+ ++..+.+++.
T Consensus 60 rlvAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 60 RLVAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 78999999999999887764 5555555544
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.13 Score=46.85 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHH
Q 018916 104 DLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 104 ~~~~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
++.+.|..+++... .-++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34455566666552 136999999999999998775
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.57 Score=44.25 Aligned_cols=110 Identities=22% Similarity=0.159 Sum_probs=60.3
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHH---HHH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAE---VLN 114 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~---~l~ 114 (349)
-|++|++||.+....+....... ........++.-|+.+.+| |+..... ......+.+.|+...+.- -+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~-~~~~~~~~~~VVvVt~~YRLG~lGF~st~d--~~~~gN~gl~Dq~~AL~wv~~~I~ 188 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEII-SPAYVLLLKDVVVVTINYRLGPLGFLSTGD--SAAPGNLGLFDQLLALRWVKDNIP 188 (545)
T ss_pred CCEEEEEeCCceeeccccchhhc-CchhccccCCEEEEEecccceeceeeecCC--CCCCCcccHHHHHHHHHHHHHHHH
Confidence 69999999986543331000001 1111223345666676655 3322211 111345667777665543 345
Q ss_pred HcCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCC
Q 018916 115 HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (349)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 154 (349)
.+|. ++|.++|||.||..+..+... ....+.++|..++..
T Consensus 189 ~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 189 SFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred hcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 5553 579999999999999866542 223455556555443
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.33 Score=44.72 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=58.1
Q ss_pred hhhhcCCeEEEEECCCCCCCCCC--CCCCCCCC--------CCHHHHHHHHHHHHHHc-C--CCcEEEEEechhHHHHHH
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAA--AISDDEPV--------LSVDDLADQIAEVLNHF-G--LGAVMCMGVTAGAYILTL 135 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~--~~~~~~~~--------~~~~~~~~~l~~~l~~l-~--~~~v~lvGhS~Gg~ia~~ 135 (349)
...+.+||.++.=|- ||..+.. ........ .++.+++..-.++++.+ + .+.-+..|.|.||.-++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 456789999999997 6643321 11111111 12333333334444432 3 356799999999999999
Q ss_pred HHHhhhcccceeEEecCCCCC
Q 018916 136 FAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 136 ~a~~~p~~v~~lvl~~~~~~~ 156 (349)
.|.+||+..++++.-+|+...
T Consensus 132 ~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 132 AAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHhChhhcCeEEeCCchHHH
Confidence 999999999999999988754
|
It also includes several bacterial homologues of unknown function. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.2 Score=46.44 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=20.3
Q ss_pred HHcCCCcEEEEEechhHHHHHHHHHh
Q 018916 114 NHFGLGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 114 ~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+....-+++++|||+||.+|..++..
T Consensus 246 ~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 246 DEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33333579999999999999987764
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.083 Score=44.41 Aligned_cols=38 Identities=11% Similarity=0.006 Sum_probs=33.2
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
+.-+|+|.|+||.+++..+..+|+.+-.++..++....
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 34689999999999999999999999999988876653
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.14 Score=40.27 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=46.7
Q ss_pred CCceEEEEeCCCccc-----hhHHHHHHHhcccceeEEEEcCCCCcccccC---hhhHHHHHHHHHhh
Q 018916 243 QCRSLIFVGESSPFH-----SEAVHMTSKIDRRYSALVEVQACGSMVTEEQ---PHAMLIPMEYFLMG 302 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~-----~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 302 (349)
++++|-|-|+.|.+. ..+..+...++......++.+++||+....- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 456777999999998 3455577777776677888899999877743 46788999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.46 E-value=0.23 Score=43.56 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh
Q 018916 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
..+.+++..+++....-++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5777788888888877789999999999999987764
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.14 Score=39.12 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=36.3
Q ss_pred HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 112 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
+++..-....++-|-||||+-|+.+..++|+...++|.++.....
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 343333356788899999999999999999999999998876654
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.34 E-value=1.5 Score=38.07 Aligned_cols=61 Identities=16% Similarity=0.104 Sum_probs=45.2
Q ss_pred cccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 240 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.++..|-.++.+..|.+. +.+.-..+.+++ ...+..+|+..|..- +..+.+.|..|+.++.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq 388 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI---NQFIKESLEPFLNRFQ 388 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh---HHHHHHHHHHHHHHHh
Confidence 467789999999998887 566667889997 466888999999765 4455566666666553
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.98 E-value=2.2 Score=38.91 Aligned_cols=136 Identities=15% Similarity=0.132 Sum_probs=77.2
Q ss_pred CCCceeEEeCC---CeeEEEEEcc----CCCCCeEEEecCCCCChhhhhccccc--chhhhh-----h------hcCCeE
Q 018916 18 PSGKDNLIKTS---HGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFF--CPEACS-----L------LLHNFC 77 (349)
Q Consensus 18 ~~~~~~~i~~~---~~~l~~~~~g----~~~~p~vv~lHG~~~~~~~~~~~~~~--~~~~~~-----~------l~~g~~ 77 (349)
+....=++.++ +..+.|+... +..+|.||.+-|.++.++.. .++. .+.... + -.+-.+
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~--G~~~E~GPf~v~~~G~tL~~N~ySWnk~aN 119 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG--GLFEENGPFRVKYNGKTLYLNPYSWNKEAN 119 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh--hhhhhcCCeEEcCCCCcceeCCcccccccc
Confidence 33344466664 5678887654 34678999998886655332 1110 010000 0 123457
Q ss_pred EEEECCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH---cCCCcEEEEEechhHHHHHHHHHh----hh----
Q 018916 78 IYHINPP-GHEFGAAAISDDEPVLSVDDLADQIAEVL----NH---FGLGAVMCMGVTAGAYILTLFAMK----YR---- 141 (349)
Q Consensus 78 vi~~D~~-G~G~s~~~~~~~~~~~~~~~~~~~l~~~l----~~---l~~~~v~lvGhS~Gg~ia~~~a~~----~p---- 141 (349)
++-+|.| |.|.|=+..+.+.. .+-+..++|+..++ ++ +...++++.|-|++|...-.+|.+ ..
T Consensus 120 iLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~ 198 (454)
T KOG1282|consen 120 ILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCK 198 (454)
T ss_pred EEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccC
Confidence 8888876 67877543222111 34444555555444 33 234789999999999777666653 21
Q ss_pred --cccceeEEecCCCCC
Q 018916 142 --HRVLGLILVSPLCKA 156 (349)
Q Consensus 142 --~~v~~lvl~~~~~~~ 156 (349)
-.++|+++-++....
T Consensus 199 ~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 199 PNINLKGYAIGNGLTDP 215 (454)
T ss_pred CcccceEEEecCcccCc
Confidence 246788877776643
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=91.48 E-value=2.7 Score=34.49 Aligned_cols=64 Identities=14% Similarity=0.190 Sum_probs=38.9
Q ss_pred CeEEEEECCCCC-CC-CCCCCCCCCCCCCHHHHHHHHHHHHHH-c-CCCcEEEEEechhHHHHHHHHHhh
Q 018916 75 NFCIYHINPPGH-EF-GAAAISDDEPVLSVDDLADQIAEVLNH-F-GLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 75 g~~vi~~D~~G~-G~-s~~~~~~~~~~~~~~~~~~~l~~~l~~-l-~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
|+.+..+++|.. +- +. ........++.+=++.+.+.++. . .-++++++|+|.|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g--~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG--IGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCC--CCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 566777777762 10 00 01112234555555566665554 1 237899999999999999877654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.53 Score=33.73 Aligned_cols=35 Identities=3% Similarity=-0.072 Sum_probs=20.2
Q ss_pred ceeEEeCCCeeEEEEEccC--CCCCeEEEecCCCCCh
Q 018916 21 KDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNY 55 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~~~~ 55 (349)
....++++|..||+..... ++..+|||+||++++-
T Consensus 69 phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 69 PHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp -EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred CCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 3445667899998865542 3556999999998775
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.86 E-value=0.84 Score=42.19 Aligned_cols=57 Identities=16% Similarity=0.321 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHh-----hhc------ccceeEEecCCCCCC
Q 018916 101 SVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMK-----YRH------RVLGLILVSPLCKAP 157 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~~~~ 157 (349)
++..-...+.+.+++.++ .+|+.+||||||.++=.+... .|+ ...|+++++.+....
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 333333444444444443 579999999999888766543 232 367888888775543
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.00 E-value=0.43 Score=41.93 Aligned_cols=85 Identities=14% Similarity=0.137 Sum_probs=44.2
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
+-.+|+.||+-+.... +|...+.+...+ +..++..+..|. .... ...-..-=+.+++++.+.+....++
T Consensus 80 ~HLvVlthGi~~~~~~-----~~~~~~~~~~kk~p~~~iv~~g~~~~--~~~T--~~Gv~~lG~Rla~~~~e~~~~~si~ 150 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADME-----YWKEKIEQMTKKMPDKLIVVRGKMNN--MCQT--FDGVDVLGERLAEEVKETLYDYSIE 150 (405)
T ss_pred ceEEEeccccccccHH-----HHHHHHHhhhcCCCcceEeeeccccc--hhhc--cccceeeecccHHHHhhhhhccccc
Confidence 3489999999761111 132222233322 333344444433 2211 1111111233455555555555578
Q ss_pred cEEEEEechhHHHHHH
Q 018916 120 AVMCMGVTAGAYILTL 135 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~ 135 (349)
++-++|||+||.++..
T Consensus 151 kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARY 166 (405)
T ss_pred eeeeeeeecCCeeeeE
Confidence 9999999999998874
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=86.91 E-value=1.5 Score=36.64 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=23.0
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
.+.+...-.++.|-|||+||.+|..+-.++
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 333444446799999999999999887776
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.91 E-value=1.5 Score=36.64 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=23.0
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
.+.+...-.++.|-|||+||.+|..+-.++
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 333444446799999999999999887776
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=86.60 E-value=4.4 Score=34.67 Aligned_cols=113 Identities=15% Similarity=0.195 Sum_probs=71.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhh----------cCCeEEEEECCC-CCCCCCCCCCCCCCCCCHHHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL----------LHNFCIYHINPP-GHEFGAAAISDDEPVLSVDDLADQ 108 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l----------~~g~~vi~~D~~-G~G~s~~~~~~~~~~~~~~~~~~~ 108 (349)
..+|..+.+-|..+.+...+..+ ..+-++- -+...++.+|-| |.|.|--+- ......+.++++.|
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNF---eE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg-~~~Y~~~~~qia~D 104 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNF---EELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDG-SSAYTTNNKQIALD 104 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccch---hhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecC-cccccccHHHHHHH
Confidence 45677788887766655443322 1111110 134567777765 677764321 12234567888999
Q ss_pred HHHHHHHc-------CCCcEEEEEechhHHHHHHHHHhhhc---------ccceeEEecCCCCC
Q 018916 109 IAEVLNHF-------GLGAVMCMGVTAGAYILTLFAMKYRH---------RVLGLILVSPLCKA 156 (349)
Q Consensus 109 l~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~~~~~~ 156 (349)
+.++++.+ +..+++++.-|+||-+|..++...-+ .+.+++|-++....
T Consensus 105 l~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 105 LVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 99988754 34689999999999999988874322 35677777766543
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.52 E-value=2.4 Score=38.59 Aligned_cols=63 Identities=24% Similarity=0.353 Sum_probs=45.6
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhc------------------c-----cceeEEEEcCCCCcccccChhhHHHHHH
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKID------------------R-----RYSALVEVQACGSMVTEEQPHAMLIPME 297 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~------------------~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 297 (349)
..+++|..|+.|.++ -..+.+.+.+. + .+..+..+.|+||++..++|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 379999999999888 22222222211 0 0134577789999999999999999999
Q ss_pred HHHhhccc
Q 018916 298 YFLMGYGL 305 (349)
Q Consensus 298 ~fl~~~~~ 305 (349)
.|+....+
T Consensus 443 ~fl~g~~l 450 (454)
T KOG1282|consen 443 RFLNGQPL 450 (454)
T ss_pred HHHcCCCC
Confidence 99987643
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.85 E-value=2.3 Score=38.76 Aligned_cols=44 Identities=16% Similarity=0.187 Sum_probs=34.0
Q ss_pred HHcCCCcEEEEEechhHHHHHHHHHhhh-----cccceeEEecCCCCCC
Q 018916 114 NHFGLGAVMCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLCKAP 157 (349)
Q Consensus 114 ~~l~~~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~ 157 (349)
..+|.+||.|+|+|+|+-+...+..... +.|..++|++.+....
T Consensus 442 r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 442 RSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred hccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 4467899999999999999987665322 3488899988877654
|
|
| >cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases | Back alignment and domain information |
|---|
Probab=83.65 E-value=4.4 Score=32.64 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=45.7
Q ss_pred hhcCCe-EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEech----hHHHHHHHHHhh
Q 018916 71 LLLHNF-CIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTA----GAYILTLFAMKY 140 (349)
Q Consensus 71 ~l~~g~-~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~----Gg~ia~~~a~~~ 140 (349)
+...|. +|+..|.++.. .++.+.+++.+.++++..+ ..++|+|+|. |..++.++|++.
T Consensus 72 l~~~G~d~V~~~~~~~~~-----------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 72 ALAMGADRAILVSDRAFA-----------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred HHHcCCCEEEEEeccccc-----------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 344565 78888776652 2688999999999998877 6799999988 889999998875
|
ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit. |
| >TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Probab=82.27 E-value=1.1 Score=38.50 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=23.9
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (349)
+.++++..|+++..++|||+|-+.|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 344557778899999999999988886654
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. |
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.21 E-value=3.7 Score=38.15 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=57.9
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhh-hcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL---NHF 116 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~-l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l---~~l 116 (349)
++-.||-+||.|.-..+.-.+- ..+..+ .+-|..|+.+|+-=- | ....+..+++.--...-++ ..+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE---~YLr~Wa~aL~cPiiSVdYSLA-----P--EaPFPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHE---PYLRSWAQALGCPIISVDYSLA-----P--EAPFPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred CceEEEEecCCceeeecccccc---HHHHHHHHHhCCCeEEeeeccC-----C--CCCCCcHHHHHHHHHHHHhcCHHHh
Confidence 4447888899875433321111 111222 244899999998433 1 2223344555433322223 345
Q ss_pred CC--CcEEEEEechhHHHHHHHHHhhh---cc-cceeEEecCCC
Q 018916 117 GL--GAVMCMGVTAGAYILTLFAMKYR---HR-VLGLILVSPLC 154 (349)
Q Consensus 117 ~~--~~v~lvGhS~Gg~ia~~~a~~~p---~~-v~~lvl~~~~~ 154 (349)
|. ++|+++|-|.||.+..-.|.+.- -+ -+|+++.-++.
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 53 79999999999987666555421 12 35777766654
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=81.38 E-value=44 Score=30.75 Aligned_cols=119 Identities=17% Similarity=0.223 Sum_probs=66.6
Q ss_pred eEEeCCCeeEEEE-EccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEE-CCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVT-IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI-NPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~-~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~-D~~G~G~s~~~~~~~~~~~ 100 (349)
.++...+..+.|+ .-|+-..|..|..-|+-. ...|..+ | -.-.-|...+.+ |.|=-|.+=- -+...+
T Consensus 269 r~~D~~reEi~yYFnPGD~KPPL~VYFSGyR~--aEGFEgy-~-----MMk~Lg~PfLL~~DpRleGGaFY---lGs~ey 337 (511)
T TIGR03712 269 RLVDSKRQEFIYYFNPGDFKPPLNVYFSGYRP--AEGFEGY-F-----MMKRLGAPFLLIGDPRLEGGAFY---LGSDEY 337 (511)
T ss_pred eEecCCCCeeEEecCCcCCCCCeEEeeccCcc--cCcchhH-H-----HHHhcCCCeEEeeccccccceee---eCcHHH
Confidence 3444444455444 445445667788766532 1113333 1 112235555444 7777764321 111112
Q ss_pred CHHHHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 101 SVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
-+.+.+-|.+.++.||.+ ..+|-|-|||..=|+.|+++.. -.++|+--|...
T Consensus 338 -E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 338 -EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred -HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 345566667777888875 5999999999999999988752 345555445443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 349 | ||||
| 2xmq_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 3e-34 | ||
| 2xmr_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 1e-33 | ||
| 2xms_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 2e-33 | ||
| 2qmq_A | 286 | Crystal Structure Of A N-Myc Downstream Regulated 2 | 2e-32 |
| >pdb|2XMQ|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2XMR|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2XMS|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2QMQ|A Chain A, Crystal Structure Of A N-Myc Downstream Regulated 2 Protein (Ndrg2, Syld, Ndr2, Ai182517, Au040374) From Mus Musculus At 1.70 A Resolution Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 1e-81 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 2e-14 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 3e-14 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 3e-12 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 2e-11 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 3e-11 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 2e-10 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 8e-10 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 5e-09 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 6e-09 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 8e-09 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 3e-08 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 4e-08 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 6e-08 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 6e-08 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 7e-08 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 8e-08 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 2e-07 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 3e-07 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 4e-07 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 8e-07 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 1e-06 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 1e-06 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 2e-06 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 3e-06 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 3e-06 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 6e-06 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 8e-06 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 9e-06 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 1e-05 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 1e-05 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 1e-05 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 3e-05 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 5e-05 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 6e-05 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 8e-05 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 1e-04 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 2e-04 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 4e-04 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 5e-04 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 5e-04 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 6e-04 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 6e-04 |
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 249 bits (636), Expect = 1e-81
Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 19/291 (6%)
Query: 18 PSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN 75
+ ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ N
Sbjct: 9 HHHHTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QN 67
Query: 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135
F H++ PG E GA S+D LAD I +L + ++ +GV AGAYIL+
Sbjct: 68 FVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSR 127
Query: 136 FAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV 195
+A+ + V GL+L++ A W +W +K G+ + +++L FS++E+
Sbjct: 128 YALNHPDTVEGLVLINIDPNAKGWMDWAAHK-------LTGLTSSIPDMILGHLFSQEEL 180
Query: 196 RGNAQVPESDIVQACRRLLDERQSS-NVWHFLEAINGRPDIS---EGLRKLQCRSLIFVG 251
GN S+++Q R ++ + N+ + + N R D++ G L+C ++ VG
Sbjct: 181 SGN-----SELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVG 235
Query: 252 ESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302
+ +P V SK+D ++ +++ G QP + +YFL G
Sbjct: 236 DQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 2e-14
Identities = 38/218 (17%), Positives = 79/218 (36%), Gaps = 24/218 (11%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
PGH G S DE + D + + +L+ + ++ G + G + +A+
Sbjct: 51 PGH--GEDQSSMDET-WNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIP 107
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVM----SNLLYYYGMCGVVKELLLKRYFSKQEVRGNA 199
+ LIL S L +++ + +L G+ V + K + ++
Sbjct: 108 ISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVND-WEKLPLFQSQLELPV 166
Query: 200 QVPESDIVQACRRLLDERQSSNVWHFLEAING-----RPDISEGLRKLQCRSLIFVGES- 253
++ ++ +R S + +A+ P++ L++++ +LI GE
Sbjct: 167 EI--------QHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYD 218
Query: 254 SPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
F A M + I S + A G + E
Sbjct: 219 EKFVQIAKKMANLIPN--SKCKLISATGHTIHVEDSDE 254
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 3e-14
Identities = 38/212 (17%), Positives = 67/212 (31%), Gaps = 17/212 (8%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G G + E S+ +A ++ + L G+ +G GA + A+ Y
Sbjct: 50 RGT--GNNPDTLAEDY-SIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPAS 106
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPE 203
V LI V+ + + T + V LLY G V E + +
Sbjct: 107 VTVLISVNGWLRINAHTRRCFQ-VRERLLYSGGAQAWV-EAQPLFLYPADWMAAR---AP 161
Query: 204 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSE 259
+ L + +N+ L A+ R D S +++C I S
Sbjct: 162 RLEAEDALALAHFQGKNNLLRRLNAL-KRADFSHHADRIRCPVQIICASDDLLVPTACSS 220
Query: 260 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+H + + S + + G P
Sbjct: 221 ELH--AALPD--SQKMVMPYGGHACNVTDPET 248
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 3e-12
Identities = 45/302 (14%), Positives = 86/302 (28%), Gaps = 67/302 (22%)
Query: 13 METPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL 72
+ P K I T G V G +D P LV L
Sbjct: 38 LSLWPVRCKSFYISTRFGQTHVIASGPEDAPPLV-------------------------L 72
Query: 73 LH------------------NFCIYHINPPGHEFGAAAISD--DEPVLSVDDLADQIAEV 112
LH + Y ++ G + + D A+ + +V
Sbjct: 73 LHGALFSSTMWYPNIADWSSKYRTYAVDIIGD--KN---KSIPENVSGTRTDYANWLLDV 127
Query: 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172
++ G+ +G++ G F ++ RV ++SP + Y +
Sbjct: 128 FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTA 187
Query: 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR 232
V+ L + + V V+ + + + S +
Sbjct: 188 SN-----GVETFL--NWMM-----NDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPY 235
Query: 233 PDISEGLRKLQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP 289
E LR + L+ +GE + S +S + ++ G +++ EQP
Sbjct: 236 VFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPD--IEAEVIKNAGHVLSMEQP 293
Query: 290 HA 291
Sbjct: 294 TY 295
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 31/214 (14%), Positives = 71/214 (33%), Gaps = 27/214 (12%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
GH G + +++ L + +++ + G++ G A ++ R
Sbjct: 61 RGH--GHSEAPKGP--YTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADR 116
Query: 144 VLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQV 201
+ + L + + S W+ K + GM + + +L R+F+ +
Sbjct: 117 IERVALCNTAARIGSPEVWVPRAVKARTE-----GMHALA-DAVLPRWFTADYMEREP-- 168
Query: 202 PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFH 257
++ R + EAI D+ ++ +L+ G ++P
Sbjct: 169 ---VVLAMIRDVFVHTDKEGYASNCEAI-DAADLRPEAPGIKVPALVISGTHDLAATPAQ 224
Query: 258 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ I + VE+ A + E+ A
Sbjct: 225 GRE--LAQAIAG--ARYVELDA-SHISNIERADA 253
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-11
Identities = 46/272 (16%), Positives = 100/272 (36%), Gaps = 30/272 (11%)
Query: 25 IKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP 83
+ TS G SL+ + G +KP L + + + L +F + +
Sbjct: 9 LATSDGASLAYRLDGAAEKPLLALSNSIGTT-LHMWDAQL------PALTRHFRVLRYDA 61
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
GH GA+++ ++ L + + E+L+ + +G++ G + A+ R
Sbjct: 62 RGH--GASSVPPGPY--TLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQR 117
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPE 203
+ L+L + +W ++ ++ +L M L +F +
Sbjct: 118 IERLVLANTSAWLGPAAQW--DERIAAVLQAEDMSETA-AGFLGNWFPPALLERAE---- 170
Query: 204 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSE 259
+V+ R +L + A+ D+ L +++ +L+ G ++ H E
Sbjct: 171 -PVVERFRAMLMATNRHGLAGSFAAV-RDTDLRAQLARIERPTLVIAGAYDTVTAASHGE 228
Query: 260 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ + I + LV + A + E P A
Sbjct: 229 L--IAASIAG--ARLVTLPA-VHLSNVEFPQA 255
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-10
Identities = 28/241 (11%), Positives = 73/241 (30%), Gaps = 45/241 (18%)
Query: 72 LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-----AVMC--- 123
L ++ ++ GH G S + +V D +A + + + +
Sbjct: 38 YLEDYNCILLDLKGH--GE---SKGQCPSTVYGYIDNVANFITNSEVTKHQKNITLIGYS 92
Query: 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183
MG I+ A+K V ++ +S + + K+ N
Sbjct: 93 MG----GAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHN------------- 135
Query: 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWH-FLEAINGRPDISEGLRKL 242
L + + + G ++ + + L + ++ L A D+ + L+ +
Sbjct: 136 -QLDNNYLLECIGGI----DNPLSEKYFETL--EKDPDIMINDLIACK-LIDLVDNLKNI 187
Query: 243 QCRSLIFVGE---SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYF 299
V + + + + ++ S L + + + ++ F
Sbjct: 188 DIPVKAIVAKDELLTLV-EYSEIIKKEV--ENSELKIFETGKHFLLVVNAKGVAEEIKNF 244
Query: 300 L 300
+
Sbjct: 245 I 245
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 8e-10
Identities = 34/216 (15%), Positives = 62/216 (28%), Gaps = 25/216 (11%)
Query: 84 PGHEFGAAAISD-DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG G SD P S + L I + G + G + G Y+ A +
Sbjct: 58 PGM--GN---SDPISPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKD 112
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
+ LG+ L P+ A + N+L KE +
Sbjct: 113 QTLGVFLTCPVITADHSKRLTGKHI--NILEEDINPVENKEYFADFLS-------MNVII 163
Query: 203 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDIS----EGLRKLQCRSLIFVGE---SSP 255
+ + L+ F++ + + Q I VG
Sbjct: 164 NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVG 223
Query: 256 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ E + + + + +V + G + +Q A
Sbjct: 224 Y-QEQLKLINHNEN--GEIVLLNRTGHNLMIDQREA 256
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 5e-09
Identities = 32/222 (14%), Positives = 71/222 (31%), Gaps = 7/222 (3%)
Query: 84 PGH-EFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
G + + V +QI ++NHFG+ +G + G + ++
Sbjct: 67 IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPE 126
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVP 202
R + L+ + + ++++ Y +EL+ + + G ++
Sbjct: 127 RFDKVALMGSVGAPMNARPPELARLLA--FYADPRLTPYRELIHSFVYDPENFPGMEEIV 184
Query: 203 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF--HSEA 260
+S A + Q + L +L L+F G +
Sbjct: 185 KSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTS 244
Query: 261 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302
+++T + + LV + CG E+ AM +
Sbjct: 245 LYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 55.4 bits (133), Expect = 6e-09
Identities = 32/228 (14%), Positives = 78/228 (34%), Gaps = 20/228 (8%)
Query: 72 LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAY 131
L + I I+ P G + +S+ V + D + I + HF + + + G +
Sbjct: 66 LPDSIGILTIDAPNS--GYSPVSNQANV-GLRDWVNAILMIFEHFKFQSYLLCVHSIGGF 122
Query: 132 ILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL-----LL 186
+ LG I + P + + L + L L
Sbjct: 123 AALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLS 182
Query: 187 KRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 246
+ +FS Q+ + + C+R L++ Q ++ F + + + + S
Sbjct: 183 RSHFSSQQFKQLWR-----GYDYCQRQLNDVQ--SLPDFKIRLALGEEDFKTGISEKIPS 235
Query: 247 LIFVGESSPFHSEAVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAML 293
++F E ++ S+ +++ + + + + +++L
Sbjct: 236 IVFSES----FREKEYLESEYLNKHTQTKLILCGQHHYLHWSETNSIL 279
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 8e-09
Identities = 43/288 (14%), Positives = 81/288 (28%), Gaps = 39/288 (13%)
Query: 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFG 89
L +GD PAL+ L L + E L + + G
Sbjct: 12 ELWSDDFGDPADPALL------LVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDT--G 63
Query: 90 A-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI 148
+LA VL+ +G+ +G++ GA I + A+ + R+ L
Sbjct: 64 RSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLT 123
Query: 149 LVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDI-- 206
++ + + +VM G+ G + L Q G A +
Sbjct: 124 MLLGGGLDIDFDANI-ERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSK 182
Query: 207 ------------VQACRRLLDE------RQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 248
R + + + P + LR++ +L+
Sbjct: 183 WRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLV 242
Query: 249 FVGESSPF----HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 292
E P H + + I + L E+ G + +
Sbjct: 243 IQAEHDPIAPAPHGKHLA--GLI--PTARLAEIPGMGHALPSSVHGPL 286
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 33/226 (14%), Positives = 66/226 (29%), Gaps = 33/226 (14%)
Query: 71 LLLHNFCIYHINPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAG 129
L F + +P G+ G D P + A +++ V +G + G
Sbjct: 47 LNKKLFTVVAWDPRGY--GHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDG 104
Query: 130 AYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189
+ A KY + +++ +Y + + ++ L Y
Sbjct: 105 GITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDY 164
Query: 190 FSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 249
F++ E+ + F +G L ++QC +LI
Sbjct: 165 FAR---------------------TCEKWVDGIRQFKHLPDGN-ICRHLLPRVQCPALIV 202
Query: 250 VGESSPF----HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
GE P H++ +H + S L + +
Sbjct: 203 HGEKDPLVPRFHADFIH--KHVKG--SRLHLMPEGKHNLHLRFADE 244
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 25/212 (11%), Positives = 62/212 (29%), Gaps = 16/212 (7%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G GA +++ + + A ++ + +GV+ GA+I +
Sbjct: 80 RGI--GA---TENAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPEL 134
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPE 203
V +L++ + ++ LY G+ R +
Sbjct: 135 VSSAVLMATRGRLDRARQF--FNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVA 192
Query: 204 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSE 259
A + + + + L+ + + R + L+ + P+
Sbjct: 193 VGDWIAMFSMWPIKSTPGLRCQLDCA-PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGR 251
Query: 260 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
V + +++ G + E+P A
Sbjct: 252 EVA--DAL--PNGRYLQIPDAGHLGFFERPEA 279
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 6e-08
Identities = 40/279 (14%), Positives = 76/279 (27%), Gaps = 32/279 (11%)
Query: 25 IKTSHGSLSVTIYGDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI 81
+ L V G + PAL P + L F + +
Sbjct: 8 VPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYV---LREGLQ------DYLEGFRVVYF 58
Query: 82 NPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
+ G G + D + +VD L + + G+ + GA + ++
Sbjct: 59 DQRGS--GRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRF 116
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNL-LYYYGMCGVVKELLLKRYFSKQEVRGNA 199
++L + ++ L + +K K F R
Sbjct: 117 PQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFD----RLMF 172
Query: 200 QVPESDIVQACRRLLDERQSSNVWHFLEAING--RPDISEGLRKLQCRSLIFVGE----S 253
P + S+ NG R D + L + + VGE S
Sbjct: 173 PTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTS 232
Query: 254 SPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 292
P+ E ++ + + + G + + P A
Sbjct: 233 YPYAEEVAS---RLR---APIRVLPEAGHYLWIDAPEAF 265
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 6e-08
Identities = 36/208 (17%), Positives = 58/208 (27%), Gaps = 19/208 (9%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
+D AD IA ++ G + +G + GA A KY V ++ + +
Sbjct: 116 EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEA 175
Query: 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSS 220
++ + V+ L RY +P I
Sbjct: 176 LDALEARVNAGSQLFEDIKAVEAYLAGRY---------PNIPADAIRIRAESGYQPVDGG 226
Query: 221 NVWHFLEAI------NGRPDISEGLRKLQCRSLIFVGESSPF--HSEAVHMTSKIDRRYS 272
A R D+ R + LI GESS + +
Sbjct: 227 LRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPD--L 284
Query: 273 ALVEVQACGSMVTEEQPHAMLIPMEYFL 300
+V V V E P L + F+
Sbjct: 285 PVVVVPGADHYVNEVSPEITLKAITNFI 312
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 7e-08
Identities = 38/219 (17%), Positives = 68/219 (31%), Gaps = 31/219 (14%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G FG ++ S D D I +++ + +G G + A++Y R
Sbjct: 63 VG--FGFTDRPENYN-YSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSER 119
Query: 144 VLGLILVSPLCKAPSWTEWL---------YNKVMSNLLYYYGMCGVVKELLLKRYFSKQE 194
V ++L+ TE L + + L + +V + L + +
Sbjct: 120 VDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASI 179
Query: 195 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254
G + + RQ I+ E ++ L +LI G
Sbjct: 180 QPGFQES-------FSSMFPEPRQ--------RWIDALASSDEDIKTLPNETLIIHGRED 224
Query: 255 PF--HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
S ++ + IDR + L CG EQ
Sbjct: 225 QVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDR 261
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 8e-08
Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 26/203 (12%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D AD IA+++ H L + MG G + A RV GL+L+
Sbjct: 68 DYDTFADDIAQLIEHLDLKEVTLVGFSMG---GGDVARYIARHGSARVAGLVLLGAVTPL 124
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL-LKRYFSKQEVRGNAQVPESDIVQACR 211
+ P + + + V + ++K+ F+ N S VQ
Sbjct: 125 FGQKPDYPQGVPLDVFARFKT-----ELLKDRAQFISDFNAPFYGINKGQVVSQGVQT-- 177
Query: 212 RLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSK 266
+ L +++ ++ + D + K+ +L+ G+ PF +
Sbjct: 178 QTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAEL 237
Query: 267 IDRRYSALVEVQACGSMVTEEQP 289
I + + L +
Sbjct: 238 I--KGAELKVYKDAPHGFAVTHA 258
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 24/218 (11%)
Query: 84 PGHEFGA--AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141
G G D ++D A + +V L + +G + GA I L +++
Sbjct: 55 VGS--GHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRP 112
Query: 142 HRVLGLILVSP----LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197
L++V P L P + + + LL M F+ +
Sbjct: 113 ELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLL--EMMEKNYIGWA--TVFAATVLNQ 168
Query: 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES---- 253
+ +I + F +A D E L K+ SLI
Sbjct: 169 PDR---PEIKEELESRFCSTDPVIARQFAKAA-FFSDHREDLSKVTVPSLILQCADDIIA 224
Query: 254 SPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ +H + S+L +++A G P
Sbjct: 225 PATVGKYMH--QHLPY--SSLKQMEARGHCPHMSHPDE 258
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 28/205 (13%), Positives = 64/205 (31%), Gaps = 27/205 (13%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D AD + ++L L + MG G + R+ +L+S
Sbjct: 68 DFDTFADDLNDLLTDLDLRDVTLVAHSMG---GGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRR 212
+ K+ + + ++V L G+ + + ++ N P + + Q +
Sbjct: 125 MIKSDKNPDGVPDEVFDALKN--GVLTERSQFW--KDTAEGFFSANR--PGNKVTQGNKD 178
Query: 213 -LLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSK 266
+ + + ++ G D +E L+K +L+ G+ P +
Sbjct: 179 AFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQI 238
Query: 267 IDRRYSALVEVQACG--SMVTEEQP 289
I + L + +
Sbjct: 239 IPN--AELKVYEGSSHGIAMVPGDK 261
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 4e-07
Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 10/164 (6%)
Query: 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153
S D P +V+ + +A +++ G A + G+++GA + L A + P
Sbjct: 63 SGDTPPYAVEREIEDLAAIIDAAGGAAFVF-GMSSGAGLSLLAAASGLPITRLAVFEPPY 121
Query: 154 CKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACR 211
S Y + LL G + + YF + V + + QA
Sbjct: 122 AVDDSRPPVPPDYQTRLDALL----AEGRRGDAV--TYFMTEGVGVPPDLVA-QMQQAPM 174
Query: 212 RLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255
E + + + + + + +L+ G +SP
Sbjct: 175 WPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASP 218
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 8e-07
Identities = 12/88 (13%), Positives = 28/88 (31%)
Query: 88 FGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGL 147
G + + + +A V++ LG + + + F ++ G
Sbjct: 72 LGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGF 131
Query: 148 ILVSPLCKAPSWTEWLYNKVMSNLLYYY 175
+ V+P+C + L+ Y
Sbjct: 132 VPVAPICTDKINAANYASVKTPALIVYG 159
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 16/198 (8%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
A + +++ + +G G FA++Y R+ LIL+ P PS
Sbjct: 86 RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF 145
Query: 161 EWLYNKVMSNLLYYYGMCGV--VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ 218
+ + + L Y +K++L + + + + E + + + +
Sbjct: 146 APMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQ------SLITEELLQGRWEAIQRQPE 199
Query: 219 SSNVWHF--LEAINGRPDISEGLRKLQCRSLIFVGE---SSPFHSEAVHMTSKIDRRYSA 273
+ +A D++ L +++ ++ I G P + + ID +
Sbjct: 200 HLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL-DHGLKLLWNIDD--AR 256
Query: 274 LVEVQACGSMVTEEQPHA 291
L CG+ E
Sbjct: 257 LHVFSKCGAWAQWEHADE 274
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 19/213 (8%)
Query: 84 PGHEFGAAAISD--DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141
PG +G SD D A + V++ + + +G + G + F +K+
Sbjct: 75 PG--WGK---SDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWP 129
Query: 142 HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQV 201
RV L+L+ S + + + L Y ++ L + V + +
Sbjct: 130 ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQ-PTIENL---KLMMDIFVFDTSDL 185
Query: 202 PESDIVQACRRLLDER--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES---SPF 256
++ +L R + V PD L +++ ++LI G + P
Sbjct: 186 TDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPM 245
Query: 257 HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQP 289
+ + S I S L + CG E
Sbjct: 246 -DAGLRLLSGIAG--SELHIFRDCGHWAQWEHA 275
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 39/288 (13%)
Query: 25 IKTSHGSLSVTIYGDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI 81
++ + + +G + P ++ + +Q + A L + +
Sbjct: 9 LEFGGNQICLCSWGSPEHPVVLCIHGILEQG----LAWQEV-----ALPLAAQGYRVVAP 59
Query: 82 NPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
+ GH G + + S QI V+ ++ +G + GA + T A
Sbjct: 60 DLFGH--GRSSHLEMVTS-YSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVR 116
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV----- 195
++ LILV A + ++ L Y +
Sbjct: 117 PKKIKELILVELPLPAEESKKESAVNQLTTCLDYL-----SSTPQHPIFPDVATAASRLR 171
Query: 196 RGNAQVPESDIVQACRRLLDERQSSNVWHF------------LEAINGRPDISEGLRKLQ 243
+ + E +R+ Q W + GR E L+ +Q
Sbjct: 172 QAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQ 231
Query: 244 CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ + G+SS + K+ + V + + G + + A
Sbjct: 232 VPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFL-SGGHNLHIDAAAA 278
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 22/202 (10%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
+D AD +A+++ H L AV+ G G + RV L+S
Sbjct: 68 DMDTYADDLAQLIEHLDLRDAVLFGFSTG---GGEVARYIGRHGTARVAKAGLISAVPPL 124
Query: 153 LCKAPSWTEWLYNKVMSNLLY--YYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQAC 210
+ K + L +V + + K+L +F + A+ +V
Sbjct: 125 MLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFN--QPGAKSSA-GMVDWF 181
Query: 211 RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKI 267
N + ++A D +E L+K+ +L+ G++ P + + + +
Sbjct: 182 WLQGMAAGHKNAYDCIKAF-SETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALV 240
Query: 268 DRRYSALVEVQACGSMVTEEQP 289
S L +T+
Sbjct: 241 KG--STLKIYSGAPHGLTDTHK 260
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 30/217 (13%), Positives = 65/217 (29%), Gaps = 29/217 (13%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMC---MGVTAGAYILTLFAMKY 140
PG G S LS+ D+A+ + + A+ +G + + A+ +
Sbjct: 48 PGF--GR---SRGFGALSLADMAEAVLQQAPD---KAIWLGWSLG----GLVASQIALTH 95
Query: 141 RHRVLGLILV--SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198
RV L+ V SP A + V++ ++ ++R+ + Q +
Sbjct: 96 PERVRALVTVASSPCFSARDEWPGIKPDVLAGFQ---QQLSDDQQRTVERFLALQTMGTE 152
Query: 199 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF-- 256
++ ++ L + + LE + D+ + L+ + L G
Sbjct: 153 TARQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVP 211
Query: 257 --HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ +S P
Sbjct: 212 RKVVPMLD--KLW--PHSESYIFAKAAHAPFISHPAE 244
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 25/202 (12%), Positives = 56/202 (27%), Gaps = 18/202 (8%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
D + ++L L + G + + R+ ++ +
Sbjct: 76 EYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYK 135
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKEL------LLKRYFSKQEVRGNAQVPESDIVQACRRL 213
+E + + GV+ + K +F+ V ES
Sbjct: 136 SEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAG--DRTDLVSESFR----LYN 189
Query: 214 LDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 269
D ++ L+ I + D + L K +LI G+S + +T +
Sbjct: 190 WDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIP 249
Query: 270 RYSALVEVQACGSMVTEEQPHA 291
S + ++ +
Sbjct: 250 N-SKVALIKGGPHGLNATHAKE 270
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 5e-06
Identities = 46/370 (12%), Positives = 87/370 (23%), Gaps = 137/370 (37%)
Query: 34 VTIYGDQD--KPALV--TYPDLALNYMSCFQ------GLFFCPEACSLLLHNFCIYHINP 83
V I G K + + F+ PE +L Y I+P
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-YQIDP 211
Query: 84 PGHEFGAAAISDDEPV--------------------LSVDDLADQIAEVLNHFGLGAVMC 123
+ + + L + ++ + A+ N F L C
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNLS---C 266
Query: 124 --------MGVTAG--------------------AYILTLFAMKYRHRVLGL----ILVS 151
VT + +L R L + +
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 152 PLCKA---------PS-WTEWLY------NKVMS---NLLY------YYGMCGV------ 180
P + + W W + ++ N+L + V
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240
+ +LL + + + + L E+Q + P I L
Sbjct: 387 IPTILLSLIWFDVIK----SDVMVVVNKLHKYSLVEKQPKESTISI------PSIYLEL- 435
Query: 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPME--Y 298
K++ + A+H I Y+ ++ P Y
Sbjct: 436 KVKLENEY-----------ALH--RSIVDHYNIPKTF----------DSDDLIPPYLDQY 472
Query: 299 FL--MGYGLY 306
F +G+ L
Sbjct: 473 FYSHIGHHLK 482
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 9e-05
Identities = 33/215 (15%), Positives = 65/215 (30%), Gaps = 41/215 (19%)
Query: 160 TEWLYN-KVMSNLLYYYGMCGVVKELLLKRYFSKQEVR------------GNAQVPES-- 204
+ L + N+L G+ G K + +V+ N PE+
Sbjct: 141 RQALLELRPAKNVLID-GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 205 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-----RSLIFVGE-SSPFHS 258
+++Q +D +S H I LR+L L+ + +
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259
Query: 259 EAVHMTSKI--DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY------GLYRPTL 310
A +++ KI R+ + + + H I +++ M L L
Sbjct: 260 NAFNLSCKILLTTRFKQVTDF-----LSAATTTH---ISLDHHSMTLTPDEVKSLLLKYL 311
Query: 311 SVSPRS-PLSPCCISPELLSPESMGLKLKPIKTRI 344
P+ P +P LS + ++
Sbjct: 312 DCRPQDLPREVLTTNPRRLS--IIAESIRDGLATW 344
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 10/196 (5%)
Query: 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
+D A +A + L GAV T G + A RV +LVS +
Sbjct: 70 DMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVK 129
Query: 160 TEWLYNKV-MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPES--DIVQACRRLLDE 216
++ + + + + + S N + ++
Sbjct: 130 SDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMM 189
Query: 217 RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKIDRRYSA 273
++ + + A D ++ L+++ L+ G P+ A + +
Sbjct: 190 GAANAHYECIAAF-SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLAN--AT 246
Query: 274 LVEVQACGSMVTEEQP 289
L + + P
Sbjct: 247 LKSYEGLPHGMLSTHP 262
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 26/240 (10%), Positives = 77/240 (32%), Gaps = 24/240 (10%)
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
++ +Y +N G G + + ++ S+ + + + + G +AG +
Sbjct: 49 HYSVYLVNLKGC--GNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLAL 106
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL----------LYYYGMCGVVKEL 184
++A + + + +I+ + N+ +
Sbjct: 107 VYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERK 166
Query: 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP-DISEGLRKLQ 243
L R ++ E + +A + + N ++ + + D+ + L+ ++
Sbjct: 167 ALSREWALMSF-----YSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVK 221
Query: 244 CRSLIFVGE---SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
S I+ G+ P+ + + + I + L + + E+ + L
Sbjct: 222 IPSFIYCGKHDVQCPYIF-SCEIANLIPN--ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 9e-06
Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 26/170 (15%)
Query: 10 SIDMETPPPSGKDNLIKTSHGSLSV-------TIYGDQ----DKPALVT---YPDLALNY 55
+++ T P + + S ++ + + L+ P +A NY
Sbjct: 11 TLEANTNGPGSMLSRMPVSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNY 70
Query: 56 MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV--LSVDDLADQIAEVL 113
++ L + H + G G + D P + D+ V
Sbjct: 71 VANIAALA--------DETGRTVIHYDQVGC--GNSTHLPDAPADFWTPQLFVDEFHAVC 120
Query: 114 NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163
G+ +G + G + A++ ++ L + + W+E
Sbjct: 121 TALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAA 170
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 1e-05
Identities = 27/204 (13%), Positives = 52/204 (25%), Gaps = 20/204 (9%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP----LCK 155
D A + VL L V+ + A RV L ++ L +
Sbjct: 72 DYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQ 131
Query: 156 APSWTEWLYNKVMSNLL--YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRL 213
E + +V + + Y + +++ E V +
Sbjct: 132 RDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNL--DENLGSRISE-QAVTGSWNV 188
Query: 214 LDERQSSNVWHFLEAINGRPDISEGLRKLQCRS---LIFVGESS---PFHSEAVHMTSKI 267
S+ V + D + ++ LI G P + A +
Sbjct: 189 A--IGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV 246
Query: 268 DRRYSALVEVQACGSMVTEEQPHA 291
+ VEV+ +
Sbjct: 247 PE--ADYVEVEGAPHGLLWTHADE 268
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 20/199 (10%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP----LCKA 156
S++ A + E+L L V +G + + I + + R+ + ++ P +
Sbjct: 80 SLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFP 139
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE 216
P + + L+ M Y + V G + E ++
Sbjct: 140 PDYVGGFERDDLEELI--NLMDKNYIGWA--NYLAPL-VMGASHSSE--LIGELSGSFCT 192
Query: 217 RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES----SPFHSEAVHMTSKIDRRYS 272
F +A D L + +LIF SP + + I S
Sbjct: 193 TDPIVAKTFAKAT-FFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMA--ENI--PNS 247
Query: 273 ALVEVQACGSMVTEEQPHA 291
L +QA G +
Sbjct: 248 QLELIQAEGHCLHMTDAGL 266
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 28/199 (14%), Positives = 54/199 (27%), Gaps = 16/199 (8%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156
D A + VL L AV+ MG + + R+ + ++ L
Sbjct: 73 DYDTFAADLNTVLETLDLQDAVLVGFSMG---TGEVARYVSSYGTARIAAVAFLASLEPF 129
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY--FSKQEVRGNAQVPESDIVQACRRLL 214
T+ + ++ G+ VK Y F + + +A R
Sbjct: 130 LLKTDDNPDGAAP-QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSW 188
Query: 215 DER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKIDRR 270
+ D + ++ +LI G P + A +
Sbjct: 189 NTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS- 247
Query: 271 YSALVEVQACGSMVTEEQP 289
+ VEV+ +
Sbjct: 248 -AEYVEVEGAPHGLLWTHA 265
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 45/282 (15%), Positives = 88/282 (31%), Gaps = 35/282 (12%)
Query: 25 IKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF-CIYHIN 82
+ T G + +G +D P + + L+ + + L H + + H
Sbjct: 4 VTTKDGVQIFYKDWGPRDAPVIHFHHGWPLS------ADDWDAQLLFFLAHGYRVVAHDR 57
Query: 83 PPGHEFGAAAISDD-EPVLSVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFA 137
GH G S +D AD +A V+ H G+ AV G G ++ A
Sbjct: 58 R-GH--GR---SSQVWDGHDMDHYADDVAAVVAHLGIQGAVHVGHSTG---GGEVVRYMA 108
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY------FS 191
+V +L++ + T + + G V + Y
Sbjct: 109 RHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPK--SVFDGFQAQVASNRAQFYRDVPAGPF 166
Query: 192 KQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 251
R + E I+ R + + + A + D +E L+ +Q L+ G
Sbjct: 167 YGYNRPGVEASE-GIIGNWWRQGMIGSAKAHYDGIVAF-SQTDFTEDLKGIQQPVLVMHG 224
Query: 252 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291
+ + +++K+ AL + +
Sbjct: 225 DDDQIVPYENSGVLSAKLLPN-GALKTYKGYPHGMPTTHADV 265
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 33/204 (16%), Positives = 65/204 (31%), Gaps = 26/204 (12%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV--SPLCKAPS 158
S ++ +A VL GA +G++ G A V L+LV +P
Sbjct: 128 SPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRH 187
Query: 159 WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVR-----GNAQVPESDIVQACRRL 213
+ L++ + + S Q + + +
Sbjct: 188 AELTAEQRGTVALMH-----------GEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHN 236
Query: 214 LDERQSSN-VWHF--LEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRR 270
+ N VW + + + + + L + G SS F ++ +++ RR
Sbjct: 237 SRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDT--AELHRR 294
Query: 271 ---YSALVEVQACGSMVTEEQPHA 291
+ + V+ G V +QP A
Sbjct: 295 ATHFRGVHIVEKSGHSVQSDQPRA 318
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 6e-05
Identities = 20/198 (10%), Positives = 50/198 (25%), Gaps = 19/198 (9%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR-HRVLGLILVSPLCKAPSW 159
+ E+L+ G+ + + + G ++L + R I++ L AP
Sbjct: 75 GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP 134
Query: 160 TEWLYNKVMSN-LLYYYGMCGVVKELL---LKRYFSKQEVRGNAQVPESDIVQACRRLLD 215
++ + + G G+ L ++ + A ++ R + D
Sbjct: 135 DFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIED 194
Query: 216 ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSA 273
NG P + + + +
Sbjct: 195 AY----------GRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPW--FS 242
Query: 274 LVEVQACGSMVTEEQPHA 291
++ + P
Sbjct: 243 YAKLGGPTHFPAIDVPDR 260
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 28/203 (13%), Positives = 57/203 (28%), Gaps = 35/203 (17%)
Query: 101 SVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
+ D + + + V +G + G ++ + V L+L+
Sbjct: 87 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI 146
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-- 217
E L ++ F+++ + + +D + +++ R
Sbjct: 147 HEDLR-------------------PIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYT 187
Query: 218 --QSSNVWHFLEAI-------NGRPDISEGLRKLQCRSLIFVGESSPF--HSEAVHMTSK 266
A G E +RK+Q +L+ G+ A
Sbjct: 188 YATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDL 247
Query: 267 IDRRYSALVEVQACGSMVTEEQP 289
ID S + CG E P
Sbjct: 248 IDD--SWGYIIPHCGHWAMIEHP 268
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 1e-04
Identities = 38/210 (18%), Positives = 69/210 (32%), Gaps = 26/210 (12%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
S LA +L G+ +G + G + T +A+ Y +V L+LV+P+
Sbjct: 96 SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI--GLEDW 153
Query: 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDI-----VQACRRLLD 215
+ L S +Y E + R + + PE D R
Sbjct: 154 KALGVPWRSVDDWYRRDLQTSAEGI--RQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGR 211
Query: 216 ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----------SSPFHSEAVHMTS 265
E + N + I + L +LQ +L+ +GE + + +
Sbjct: 212 ESVAWNSALTYDMI-FTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYA 270
Query: 266 KIDRRYSA------LVEVQACGSMVTEEQP 289
++ + + LVE G + P
Sbjct: 271 QLGKDAARRIPQATLVEFPDLGHTPQIQAP 300
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 22/203 (10%), Positives = 49/203 (24%), Gaps = 24/203 (11%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D A + VL L AV+ G + + R+ + ++
Sbjct: 72 DYDTFAADLNTVLETLDLQDAVLVGFSTG---TGEVARYVSSYGTARIAKVAFLASLEPF 128
Query: 153 LCKAPSWTEWLYNKVMSNLLY---YYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQA 209
L K + + + + Y + + ++ E + +
Sbjct: 129 LLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLG--TRISEEAVRNS 186
Query: 210 CRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSK 266
D + ++ +LI G P + A
Sbjct: 187 WNTAA---SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKA 243
Query: 267 IDRRYSALVEVQACGSMVTEEQP 289
+ + VEV+ +
Sbjct: 244 LPS--AEYVEVEGAPHGLLWTHA 264
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 4e-04
Identities = 16/70 (22%), Positives = 26/70 (37%)
Query: 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161
DL I + H G+ G + G+ + +A + +V L+L E
Sbjct: 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELE 144
Query: 162 WLYNKVMSNL 171
W Y + S L
Sbjct: 145 WFYQEGASRL 154
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 5e-04
Identities = 30/251 (11%), Positives = 61/251 (24%), Gaps = 28/251 (11%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV-------MCMGVTAGAYILTLF 136
H G + + E LS + +A + V+ MG GA +
Sbjct: 75 RSH--GETKVKNPED-LSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMG---GAIAVHTA 128
Query: 137 AMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVR 196
+ +LGL ++ + + + E +K +
Sbjct: 129 SSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLES 188
Query: 197 GNAQVPESDIV--QACRRLLDERQSSNVWHF-LEAI-----NGRPDISEGLRKLQCRSLI 248
+ ++ W L +S L+
Sbjct: 189 ARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLL 248
Query: 249 FVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 306
+ + I + + + CG V E+ P + + FL+ +
Sbjct: 249 LLAGVDRLDKDLT-----IGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFA 303
Query: 307 RPTLSVSPRSP 317
P P
Sbjct: 304 EPIGGFQCVFP 314
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 5e-04
Identities = 12/69 (17%), Positives = 22/69 (31%)
Query: 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161
L I + G+ + G + G+ + +A + RV ++L
Sbjct: 88 TWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLH 147
Query: 162 WLYNKVMSN 170
W Y S
Sbjct: 148 WYYQDGASR 156
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 35/214 (16%), Positives = 64/214 (29%), Gaps = 28/214 (13%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
A + + + GLG V +G G FA+ Y R L+L+ P + +
Sbjct: 88 FNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLF 147
Query: 161 EWLYNKVMSNLLYYYGMCGV--VKELLLKRYFSK--------QEVRGNAQVPESDIVQAC 210
+ + L + ++ L + K + A PES + A
Sbjct: 148 APDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPES--LTAT 205
Query: 211 RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSEAVHMTSK 266
R + ++ + + +L+ L+ G + +
Sbjct: 206 RAMGKSFAGADFE--------AGMMWREVYRLRQPVLLIWGREDRVNPLDGALVAL--KT 255
Query: 267 IDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
I R + L CG V E+ FL
Sbjct: 256 IPR--AQLHVFGQCGHWVQVEKFDEFNKLTIEFL 287
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 33/223 (14%), Positives = 66/223 (29%), Gaps = 27/223 (12%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G G + + D + +L G+ + +G + G + L A R
Sbjct: 64 RGR--GDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPAR 121
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL-LKRYFSKQEVRGNAQVP 202
+ +L P + ++ Y G + + R +
Sbjct: 122 IAAAVLNDV---GPEVSPEGLERIRG----YVGQGRNFETWMHAARALQESSGDVYPDWD 174
Query: 203 ESDIVQACRRLLDERQS-SNVWHF----------LEAINGRPDISEGLRKLQCR-SLIFV 250
+ ++ +R++ S + + + D+ L R L+
Sbjct: 175 ITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLR 234
Query: 251 GESSPFHSEAVH--MTSKIDRRYSALVEVQACGSMVTEEQPHA 291
GE+S S M S R LV + G T ++P +
Sbjct: 235 GETSDILSAQTAAKMAS---RPGVELVTLPRIGHAPTLDEPES 274
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.98 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.98 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.98 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.98 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.98 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.97 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.97 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.97 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.97 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.96 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.95 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.95 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.95 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.94 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.94 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.94 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.94 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.94 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.93 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.93 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.93 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.93 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.93 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.93 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.93 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.93 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.93 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.92 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.92 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.92 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.91 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.91 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.91 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.91 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.91 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.91 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.9 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.9 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.9 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.9 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.9 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.9 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.89 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.89 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.89 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.89 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.88 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.88 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.88 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.88 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.88 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.88 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.88 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.88 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.87 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.87 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.87 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.87 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.87 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.87 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.87 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.86 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.86 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.86 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.86 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.86 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.85 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.85 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.85 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.85 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.84 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.84 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.84 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.83 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.83 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.83 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.83 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.83 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.82 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.81 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.81 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.81 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.81 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.81 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.81 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.8 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.8 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.8 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.8 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.8 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.79 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.79 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.79 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.79 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.79 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.79 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.79 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.78 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.78 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.78 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.77 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.76 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.76 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.76 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.75 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.75 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.74 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.74 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.74 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.74 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.72 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.72 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.72 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.71 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.71 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.7 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.7 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.7 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.69 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.68 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.66 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.66 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.65 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.65 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.64 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.63 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.63 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.62 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.61 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.6 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.58 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.53 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.51 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.5 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.47 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.44 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.44 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.42 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.41 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.3 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.22 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.19 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.13 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.66 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.66 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.61 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.6 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.55 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.51 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.44 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.31 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.28 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.28 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.25 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.25 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.21 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.17 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.14 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.11 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.02 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.01 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.99 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.91 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.87 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.86 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.86 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.78 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.72 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 97.67 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.6 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.5 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.38 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.3 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.26 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.17 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.94 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.76 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.7 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.6 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.48 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.33 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.99 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.99 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.4 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.08 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.38 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 94.0 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 93.77 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 93.59 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 93.5 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 93.36 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 93.01 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 92.32 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 91.32 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 90.54 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=274.93 Aligned_cols=258 Identities=16% Similarity=0.244 Sum_probs=192.5
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
...++..+|.+++|...|++++|+|||+||++.+... |... ...+.++|+||++|+||||.|+.+ ...+
T Consensus 6 ~~~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~------w~~~-~~~L~~~~~vi~~D~rG~G~S~~~----~~~~ 74 (266)
T 3om8_A 6 LSFLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHM------WDAQ-LPALTRHFRVLRYDARGHGASSVP----PGPY 74 (266)
T ss_dssp CEEEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GGGG-HHHHHTTCEEEEECCTTSTTSCCC----CSCC
T ss_pred ceEEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHH------HHHH-HHHhhcCcEEEEEcCCCCCCCCCC----CCCC
Confidence 3455667889999999998788999999999988755 5344 355677999999999999999743 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.........+.... ........+...
T Consensus 75 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 152 (266)
T 3om8_A 75 TLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERI--AAVLQAEDMSET 152 (266)
T ss_dssp CHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHH--HHHHHCSSSHHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHH--HHHHccccHHHH
Confidence 999999999999999999999999999999999999999999999999999876544333332111 111111122222
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
. ......++.. .+... .++..+.+...+.......+...+..+.. .+..+.+.++++|+|+|+|++|.++ .
T Consensus 153 ~-~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lvi~G~~D~~~~~~ 225 (266)
T 3om8_A 153 A-AGFLGNWFPP-ALLER----AEPVVERFRAMLMATNRHGLAGSFAAVRD-TDLRAQLARIERPTLVIAGAYDTVTAAS 225 (266)
T ss_dssp H-HHHHHHHSCH-HHHHS----CCHHHHHHHHHHHTSCHHHHHHHHHHHHT-CBCTTTGGGCCSCEEEEEETTCSSSCHH
T ss_pred H-HHHHHHhcCh-hhhhc----ChHHHHHHHHHHHhCCHHHHHHHHHHhhc-cchhhHhcCCCCCEEEEEeCCCCCCCHH
Confidence 1 2233444443 22211 34445555555544444455555555544 5677789999999999999999998 5
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
..+.+.+.+++ +++++++ +||++++|+|++|++.|.+||+
T Consensus 226 ~~~~l~~~ip~--a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 226 HGELIAASIAG--ARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHHHHSTT--CEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCC--CEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 67788999998 9999997 8999999999999999999996
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=263.19 Aligned_cols=256 Identities=16% Similarity=0.251 Sum_probs=184.0
Q ss_pred eEEeCCCeeEEEEEccCCC--CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~--~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.+++.+|.+++|...|+++ +|+|||+||++.++.. |...+ ..+.++|+|+++|+||||.|+.+. ..+
T Consensus 5 ~~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~------~~~~~-~~L~~~~~vi~~D~~G~G~S~~~~----~~~ 73 (266)
T 2xua_A 5 PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSM------WAPQV-AALSKHFRVLRYDTRGHGHSEAPK----GPY 73 (266)
T ss_dssp CEEECSSSEEEEEEESCSSSCCCEEEEECCTTCCGGG------GGGGH-HHHHTTSEEEEECCTTSTTSCCCS----SCC
T ss_pred CeEEECCEEEEEEEcCCccCCCCeEEEecCccCCHHH------HHHHH-HHHhcCeEEEEecCCCCCCCCCCC----CCC
Confidence 4577889999999999755 8999999999988755 43443 445677999999999999987431 358
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.........+.... ......+....
T Consensus 74 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 150 (266)
T 2xua_A 74 TIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRA---VKARTEGMHAL 150 (266)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHH---HHHHHHCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHH---HHHHhcChHHH
Confidence 999999999999999999999999999999999999999999999999999876543322221110 00111111111
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
. +.....++.. .+.. ..++..+.+...+.......+......+.. .+..+.+.++++|+|+|+|++|.++ +
T Consensus 151 ~-~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 223 (266)
T 2xua_A 151 A-DAVLPRWFTA-DYME----REPVVLAMIRDVFVHTDKEGYASNCEAIDA-ADLRPEAPGIKVPALVISGTHDLAATPA 223 (266)
T ss_dssp H-HHHHHHHSCH-HHHH----HCHHHHHHHHHHHHTSCHHHHHHHHHHHHH-CCCGGGGGGCCSCEEEEEETTCSSSCHH
T ss_pred H-HHHHHHHcCc-cccc----CCHHHHHHHHHHHhhCCHHHHHHHHHHHhc-cCchhhhccCCCCEEEEEcCCCCcCCHH
Confidence 1 1122223322 1110 023333444444433333333333333332 3556778899999999999999998 4
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
..+.+.+.+++ .++++++ +||++++|+|+++++.|.+||++
T Consensus 224 ~~~~~~~~~~~--~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 224 QGRELAQAIAG--ARYVELD-ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp HHHHHHHHSTT--CEEEEES-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCC--CEEEEec-CCCCchhcCHHHHHHHHHHHHHh
Confidence 56778888887 8999999 99999999999999999999975
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=258.19 Aligned_cols=255 Identities=15% Similarity=0.197 Sum_probs=171.9
Q ss_pred eeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 30 GSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 30 ~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
|.++|...|+ +++|+|||+||+++++.. |.+. ...+.++|+|+++|+||||.|..+. ...++++++++
T Consensus 1 ~~i~y~~~g~~~~~~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~a~ 70 (268)
T 3v48_A 1 GHMKLSLSPPPYADAPVVVLISGLGGSGSY------WLPQ-LAVLEQEYQVVCYDQRGTGNNPDTL---AEDYSIAQMAA 70 (268)
T ss_dssp CCSCCEECCCSSTTCCEEEEECCTTCCGGG------GHHH-HHHHHTTSEEEECCCTTBTTBCCCC---CTTCCHHHHHH
T ss_pred CceEEEecCCCCCCCCEEEEeCCCCccHHH------HHHH-HHHHhhcCeEEEECCCCCCCCCCCc---cccCCHHHHHH
Confidence 3577888885 468999999999988754 5444 3556778999999999999987432 23589999999
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHH
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.............. ....+...+...... ....
T Consensus 71 dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 148 (268)
T 3v48_A 71 ELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQV-RERLLYSGGAQAWVE-AQPL 148 (268)
T ss_dssp HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHH-HHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHH-HHHHHhccchhhhhh-hhhh
Confidence 99999999999999999999999999999999999999999999876543222111100 000000000000000 0000
Q ss_pred hhcccccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHH
Q 018916 188 RYFSKQEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 264 (349)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~ 264 (349)
..+.. .+... ............... .....+...+..+.. .+..+.+.++++|+|+|+|++|.++ ...+.+.
T Consensus 149 ~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~ 223 (268)
T 3v48_A 149 FLYPA-DWMAA---RAPRLEAEDALALAHFQGKNNLLRRLNALKR-ADFSHHADRIRCPVQIICASDDLLVPTACSSELH 223 (268)
T ss_dssp HHSCH-HHHHT---THHHHHHHHHHHHHTCCCHHHHHHHHHHHHH-CBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHH
T ss_pred hcCch-hhhhc---ccccchhhHHHHHhhcCchhHHHHHHHHHhc-cchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHH
Confidence 01110 10000 001111111111111 111222223333322 3556778899999999999999988 5677889
Q ss_pred HHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 265 SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 265 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+++ .++++++++||++++|+|++|++.|.+||++.
T Consensus 224 ~~~p~--~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 224 AALPD--SQKMVMPYGGHACNVTDPETFNALLLNGLASL 260 (268)
T ss_dssp HHCSS--EEEEEESSCCTTHHHHCHHHHHHHHHHHHHHH
T ss_pred HhCCc--CeEEEeCCCCcchhhcCHHHHHHHHHHHHHHh
Confidence 99998 99999999999999999999999999999875
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-37 Score=261.29 Aligned_cols=255 Identities=15% Similarity=0.106 Sum_probs=173.2
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChh-hhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC-CCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYM-SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AISDDEP 98 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~-~~~~~~~ 98 (349)
+..++..+|.+++|...|++++|+|||+||+++++. . |...+ ..++++|+|+++|+||||.|+. +. ...
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~------w~~~~-~~L~~~~~vi~~Dl~G~G~S~~~~~--~~~ 74 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYV------LREGL-QDYLEGFRVVYFDQRGSGRSLELPQ--DPR 74 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTTSCEEEEECCTTTCCSHH------HHHHH-GGGCTTSEEEEECCTTSTTSCCCCS--CGG
T ss_pred ceeEEeECCEEEEEEeecCCCCCEEEEECCCCCcchhH------HHHHH-HHhcCCCEEEEECCCCCCCCCCCcc--Ccc
Confidence 345778899999999999777899999999998875 4 43433 4557899999999999999874 21 111
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh-----------hhh
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-----------NKV 167 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-----------~~~ 167 (349)
.++++++++|+.+++++++.++++|+||||||.+|+.+|.++|+ |+++|++++............ ...
T Consensus 75 ~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 2yys_A 75 LFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEEN 153 (286)
T ss_dssp GCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHH
Confidence 58999999999999999999999999999999999999999999 999999998762110000000 000
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHH-HHHHhhhhccchhHHHH--HHHhcCCCChhhhccccCC
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQ-ACRRLLDERQSSNVWHF--LEAINGRPDISEGLRKLQC 244 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~ 244 (349)
+...+......... +.+. ++.. ...... ................. ...... .+..+.+.++++
T Consensus 154 ~~~~~~~~~~~~~~-~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~ 219 (286)
T 2yys_A 154 LKEALKREEPKALF-DRLM--FPTP----------RGRMAYEWLAEGAGILGSDAPGLAFLRNGLWR-LDYTPYLTPERR 219 (286)
T ss_dssp HHHHHHHSCHHHHH-HHHH--CSSH----------HHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGG-CBCGGGCCCCSS
T ss_pred HHHHhccCChHHHH-Hhhh--ccCC----------ccccChHHHHHHHhhccccccchhhccccccc-CChhhhhhhcCC
Confidence 00000000000000 0000 1111 000011 11111111111111111 111111 345567889999
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|+|+|+|++|.++ . .+.+.+ +++ +++++++++||++++|+|+++++.|.+||+++
T Consensus 220 P~lvi~G~~D~~~~~~-~~~~~~-~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 220 PLYVLVGERDGTSYPY-AEEVAS-RLR--APIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp CEEEEEETTCTTTTTT-HHHHHH-HHT--CCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCcCCHh-HHHHHh-CCC--CCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 9999999999988 5 777888 887 89999999999999999999999999999875
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-36 Score=254.34 Aligned_cols=258 Identities=15% Similarity=0.130 Sum_probs=174.3
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
...+++..+|.+++|...| ++|+|||+||++.+...+. .|...+ ..++++|+|+++|+||||.|+.+. ...
T Consensus 5 ~~~~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~~~---~w~~~~-~~L~~~~~vi~~Dl~G~G~S~~~~---~~~ 75 (282)
T 1iup_A 5 EIGKSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAYA---NWRLTI-PALSKFYRVIAPDMVGFGFTDRPE---NYN 75 (282)
T ss_dssp TCCEEEEETTEEEEEEEEC--CSSEEEEECCCCTTCCHHH---HHTTTH-HHHTTTSEEEEECCTTSTTSCCCT---TCC
T ss_pred cccceEEECCEEEEEEecC--CCCeEEEECCCCCCccHHH---HHHHHH-HhhccCCEEEEECCCCCCCCCCCC---CCC
Confidence 3567888899999999998 5789999999876543221 143333 556889999999999999987432 225
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++............ ..+.......
T Consensus 76 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~-----~~~~~~~~~~ 150 (282)
T 1iup_A 76 YSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLN-----AVWGYTPSIE 150 (282)
T ss_dssp CCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHH-----HHHTCCSCHH
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHH-----HHhcCCCcHH
Confidence 89999999999999999999999999999999999999999999999999998764321111000 0000000001
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCC---------CChhhhccccCCceEEEE
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR---------PDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~Pvlii~ 250 (349)
... .+...++..... ..++..+....... .. .....+..+... ....+.+.++++|+|+|+
T Consensus 151 ~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 220 (282)
T 1iup_A 151 NMR-NLLDIFAYDRSL------VTDELARLRYEASI--QP-GFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIH 220 (282)
T ss_dssp HHH-HHHHHHCSSGGG------CCHHHHHHHHHHHT--ST-THHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred HHH-HHHHHhhcCccc------CCHHHHHHHHhhcc--Ch-HHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEe
Confidence 111 111211111010 02222221111110 11 111111111100 011256788999999999
Q ss_pred eCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|++|.++ +..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 221 G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 221 GREDQVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp ETTCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred cCCCCCCCHHHHHHHHHhCCC--CeEEEECCCCCCccccCHHHHHHHHHHHHhcC
Confidence 9999998 456678888887 99999999999999999999999999999864
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=261.40 Aligned_cols=261 Identities=9% Similarity=0.039 Sum_probs=172.8
Q ss_pred ceeEEeCCC----eeEEEEEccCCC-CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSH----GSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~~~----~~l~~~~~g~~~-~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+..++++++ .+++|...|+++ +|+|||+||++.++.. |..++..+.++||+||++|+||||.|+.+.
T Consensus 21 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~-- 92 (310)
T 1b6g_A 21 SPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYL------YRKMIPVFAESGARVIAPDFFGFGKSDKPV-- 92 (310)
T ss_dssp CCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCEES--
T ss_pred CceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCchhh------HHHHHHHHHhCCCeEEEeCCCCCCCCCCCC--
Confidence 567888888 899999999766 8999999999988754 655555555667999999999999997532
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC--CCChhHHh--------hh
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK--APSWTEWL--------YN 165 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~--~~~~~~~~--------~~ 165 (349)
....|+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++... ........ ..
T Consensus 93 ~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
T 1b6g_A 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGF 172 (310)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTH
T ss_pred CcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHH
Confidence 123589999999999999999999999999999999999999999999999999998652 11000000 00
Q ss_pred hhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhcCC--------CChh
Q 018916 166 KVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR--------PDIS 236 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~ 236 (349)
......... .............. . . ..++..+.+...+.... ..........+... .+..
T Consensus 173 ~~~~~~~~~--~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 1b6g_A 173 TAWKYDLVT--PSDLRLDQFMKRWA-P-T-------LTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAI 241 (310)
T ss_dssp HHHHHHHHS--CSSCCHHHHHHHHS-T-T-------CCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred HHHHHHhcc--CchhhhhhHHhhcC-C-C-------CCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHh
Confidence 000000000 00000000000000 0 0 02222222222111000 00111111111000 1123
Q ss_pred hhcc-ccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEE--cCCCCcccccChhhHHHHHHHHHhhc
Q 018916 237 EGLR-KLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEV--QACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 237 ~~l~-~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i--~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+. ++++|+|+|+|++|.++ ...+.+.+.+++ .+++++ +++||++++ +|++|++.|.+||++.
T Consensus 242 ~~l~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~ip~--~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 242 SFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALIN--GCPEPLEIADAGHFVQE-FGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHST--TCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHHT
T ss_pred hhhhccccCceEEEeccCcchhhhHHHHHHHhccc--ccceeeecCCcccchhh-ChHHHHHHHHHHHhcc
Confidence 5577 89999999999999988 456678888888 666666 999999999 9999999999999763
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-36 Score=254.84 Aligned_cols=256 Identities=11% Similarity=0.116 Sum_probs=175.4
Q ss_pred eCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHH
Q 018916 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 105 (349)
..++.+++|...| ++++|||+||+++++.. |...+..+.++||+||++|+||||.|+.+ ...++++++
T Consensus 13 ~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 80 (281)
T 3fob_A 13 NQAPIEIYYEDHG--TGKPVVLIHGWPLSGRS------WEYQVPALVEAGYRVITYDRRGFGKSSQP----WEGYEYDTF 80 (281)
T ss_dssp TTEEEEEEEEEES--SSEEEEEECCTTCCGGG------GTTTHHHHHHTTEEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred CCCceEEEEEECC--CCCeEEEECCCCCcHHH------HHHHHHHHHhCCCEEEEeCCCCCCCCCCC----ccccCHHHH
Confidence 3467789999998 57899999999988755 54555666678999999999999999743 235899999
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCC--------ChhHHhhhhhhhHHHHhcC
Q 018916 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 176 (349)
++|+.+++++++.++++|+||||||.+++.+++.+ |++|+++|++++..... ..........+...... .
T Consensus 81 a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (281)
T 3fob_A 81 TSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVIN-D 159 (281)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhh-h
Confidence 99999999999999999999999999888887765 89999999999764211 00000000000000000 0
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
..... +.+...++.. .... ....+.....................+..+.. .+..+.+.++++|+|+|+|++|.+
T Consensus 160 ~~~~~-~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lii~G~~D~~ 234 (281)
T 3fob_A 160 RLAFL-DEFTKGFFAA-GDRT--DLVSESFRLYNWDIAAGASPKGTLDCITAFSK-TDFRKDLEKFNIPTLIIHGDSDAT 234 (281)
T ss_dssp HHHHH-HHHHHHHTCB-TTBC--CSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSS
T ss_pred HHHHH-HHHHHHhccc-cccc--ccchHHHHHHhhhhhcccChHHHHHHHHHccc-cchhhhhhhcCCCEEEEecCCCCC
Confidence 00111 1122333332 1110 01123333332222222233333333444333 466778899999999999999999
Q ss_pred c--hhH-HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 257 H--SEA-VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 257 ~--~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+ +.. +.+.+.+++ +++++++++||++++|+|+++++.|.+||+
T Consensus 235 ~p~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 235 VPFEYSGKLTHEAIPN--SKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp SCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHhCCC--ceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 8 333 556778887 999999999999999999999999999996
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=252.13 Aligned_cols=257 Identities=13% Similarity=0.169 Sum_probs=173.0
Q ss_pred CCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
.+|.+++|...|++++|+|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...+++++++
T Consensus 7 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~------w~~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~ 76 (276)
T 1zoi_A 7 KDGVQIFYKDWGPRDAPVIHFHHGWPLSADD------WDAQLLFFLAHGYRVVAHDRRGHGRSSQV----WDGHDMDHYA 76 (276)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCcEEEEEecCCCCCCeEEEECCCCcchhH------HHHHHHHHHhCCCEEEEecCCCCCCCCCC----CCCCCHHHHH
Confidence 4677899999997778999999999988755 54555566677999999999999999742 2358999999
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCC--------hhHHhhhhhhhHHHHhcCc
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 177 (349)
+|+.+++++++.++++|+||||||.+|+.+|+++ |++|+++|++++...... ...... ..+..... ...
T Consensus 77 ~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~ 154 (276)
T 1zoi_A 77 DDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVF-DGFQAQVA-SNR 154 (276)
T ss_dssp HHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHH-HCH
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHH-HHHHHHHH-HhH
Confidence 9999999999999999999999999999988887 999999999997543210 000000 00000000 000
Q ss_pred chhHHHHHHH-hhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 178 CGVVKELLLK-RYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 178 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
..... .+.. .++.. .... ....++..+.+..................+.. .+..+.+.++++|+|+|+|++|.+
T Consensus 155 ~~~~~-~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~ 229 (276)
T 1zoi_A 155 AQFYR-DVPAGPFYGY-NRPG--VEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQ-TDFTEDLKGIQQPVLVMHGDDDQI 229 (276)
T ss_dssp HHHHH-HHHHTTTTTT-TSTT--CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CCCHHHHHHCCSCEEEEEETTCSS
T ss_pred HHHHH-Hhhhcccccc-cccc--ccccHHHHHHHHhhhhhhhHHHHHHHHHHhcc-cchhhhccccCCCEEEEEcCCCcc
Confidence 00111 1111 11111 0000 01122333332221111112222222333332 456677889999999999999998
Q ss_pred c--h-hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 257 H--S-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 257 ~--~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+ . ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 230 ~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 276 (276)
T 1zoi_A 230 VPYENSGVLSAKLLPN--GALKTYKGYPHGMPTTHADVINADLLAFIRS 276 (276)
T ss_dssp SCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred cChHHHHHHHHhhCCC--ceEEEcCCCCCchhhhCHHHHHHHHHHHhcC
Confidence 8 3 33456667776 9999999999999999999999999999963
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=262.95 Aligned_cols=272 Identities=10% Similarity=0.075 Sum_probs=176.1
Q ss_pred CceeEEeCCCeeEEEEEccCC--C--CCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQ--D--KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~--~--~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~ 94 (349)
.+..++.++|.+++|...|+. + +++|||+||++++... |...+..+.. .+|+||++|+||||.|+...+
T Consensus 28 ~~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~------w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~ 101 (330)
T 3nwo_A 28 VSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHN------YVANIAALADETGRTVIHYDQVGCGNSTHLPD 101 (330)
T ss_dssp -CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSG------GGGGGGGHHHHHTCCEEEECCTTSTTSCCCTT
T ss_pred CcceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchh------HHHHHHHhccccCcEEEEECCCCCCCCCCCCC
Confidence 467789999999999999973 3 4489999999877655 3344445554 699999999999999975222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh--h----h
Q 018916 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--V----M 168 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~----~ 168 (349)
.....++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|.++|++++......+....... . .
T Consensus 102 ~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (330)
T 3nwo_A 102 APADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAET 181 (330)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHH
T ss_pred CccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHH
Confidence 223458999999999999999999999999999999999999999999999999999865432111100000 0 0
Q ss_pred hHHHH----hcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHH--------HHhcCCCChh
Q 018916 169 SNLLY----YYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFL--------EAINGRPDIS 236 (349)
Q Consensus 169 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 236 (349)
...+. ...............++.. ..... ........+.+.... .....+.... ..+ ...+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 256 (330)
T 3nwo_A 182 RAALDRHEAAGTITHPDYLQAAAEFYRR-HVCRV-VPTPQDFADSVAQME--AEPTVYHTMNGPNEFHVVGTL-GDWSVI 256 (330)
T ss_dssp HHHHHHHHHHTCTTSHHHHHHHHHHHHH-HTCCS-SSCCHHHHHHHHHHH--HSCHHHHHHTCSCSSSCCSGG-GGCBCG
T ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHH-hhccc-cCCCHHHHHHHHhhc--cchhhhhcccCchhhhhhccc-cCCchh
Confidence 00000 0000000000000001110 00000 000111111111110 0000000000 000 112345
Q ss_pred hhccccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 237 EGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 237 ~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+.+.+|++|+|+|+|++|.++ ...+.+.+.+++ +++++++++||++++|+|++|++.|.+||++..
T Consensus 257 ~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~ip~--~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 257 DRLPDVTAPVLVIAGEHDEATPKTWQPFVDHIPD--VRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp GGGGGCCSCEEEEEETTCSSCHHHHHHHHHHCSS--EEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCeEEEeeCCCccChHHHHHHHHhCCC--CcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcc
Confidence 678899999999999999988 556678888887 999999999999999999999999999998764
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=254.09 Aligned_cols=260 Identities=16% Similarity=0.224 Sum_probs=174.3
Q ss_pred ceeEEeCC--C---eeEEEEEccCCCCCeEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKTS--H---GSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~~--~---~~l~~~~~g~~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
..++++++ | .+++|...| ++|+|||+||++ .+... |...+...+.++|+||++|+||||.|+.+
T Consensus 9 ~~~~~~~~~~g~~~~~l~y~~~G--~g~~vvllHG~~~~~~~~~~------w~~~~~~~L~~~~~vi~~D~~G~G~S~~~ 80 (286)
T 2puj_A 9 TSKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSN------YYRNVGPFVDAGYRVILKDSPGFNKSDAV 80 (286)
T ss_dssp HEEEEEECSTTCSSEEEEEEEEC--CSSEEEEECCCSTTCCHHHH------HTTTHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred cceEEEecCCCcceEEEEEEecC--CCCcEEEECCCCCCCCcHHH------HHHHHHHHHhccCEEEEECCCCCCCCCCC
Confidence 34577777 7 899999998 468999999997 44433 44444144556799999999999999743
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC-hh--HHhhhhhhh
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-WT--EWLYNKVMS 169 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~--~~~~~~~~~ 169 (349)
. ...++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...... .. .........
T Consensus 81 ~---~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 157 (286)
T 2puj_A 81 V---MDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLF 157 (286)
T ss_dssp C---CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHH
T ss_pred C---CcCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHH
Confidence 2 22589999999999999999999999999999999999999999999999999998764221 00 000000111
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc----CCCChhhhccccCCc
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPDISEGLRKLQCR 245 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P 245 (349)
.... ........ .....++..... ..++..+....... ............+. ...+..+.+.++++|
T Consensus 158 ~~~~-~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 228 (286)
T 2puj_A 158 KLYA-EPSYETLK-QMLQVFLYDQSL------ITEELLQGRWEAIQ-RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAK 228 (286)
T ss_dssp HHHH-SCCHHHHH-HHHHHHCSCGGG------CCHHHHHHHHHHHH-HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSC
T ss_pred HHhh-CCcHHHHH-HHHHHHhcCCcc------CCHHHHHHHHHHhh-cCHHHHHHHHHHHhhhhccccchhhHHhhcCCC
Confidence 1111 01001111 122222211011 02222222111111 11111222221111 112455678899999
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+|+|+|++|.++ ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 229 ~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 229 TFITWGRDDRFVPLDHGLKLLWNIDD--ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCccCHHHHHHHHHHCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 999999999998 566778888887 9999999999999999999999999999974
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=258.96 Aligned_cols=259 Identities=11% Similarity=0.015 Sum_probs=170.2
Q ss_pred ceeEEeCCC----eeEEEEEccCCC-CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSH----GSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~~~----~~l~~~~~g~~~-~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+..++++++ .+++|...|+++ +|+|||+||++.++.. |..++..+.++||+||++|+||||.|+.+ .
T Consensus 20 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~rvia~Dl~G~G~S~~~--~ 91 (297)
T 2xt0_A 20 APHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFL------YRKMLPVFTAAGGRVVAPDLFGFGRSDKP--T 91 (297)
T ss_dssp CCEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCEE--S
T ss_pred ccEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCccee------HHHHHHHHHhCCcEEEEeCCCCCCCCCCC--C
Confidence 466788888 899999999766 8999999999888744 55555555566899999999999999743 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh-hHHhhhhhhhHHHHh
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYY 174 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~ 174 (349)
....|+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....... .... .........
T Consensus 92 ~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~ 169 (297)
T 2xt0_A 92 DDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGF--ESWRDFVAN 169 (297)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHH--HHHHHHHHT
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhH--HHHHHHhhc
Confidence 2235899999999999999999999999999999999999999999999999999986522111 0000 000000000
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcC----------CCChhhhcc-ccC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING----------RPDISEGLR-KLQ 243 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~-~i~ 243 (349)
.. ............ . . ..++..+.+...+...........+..... ..+..+.+. +++
T Consensus 170 ~~--~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 238 (297)
T 2xt0_A 170 SP--DLDVGKLMQRAI-P-G-------ITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWS 238 (297)
T ss_dssp CT--TCCHHHHHHHHS-T-T-------CCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCC
T ss_pred cc--ccchhHHHhccC-c-c-------CCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccC
Confidence 00 000000111000 0 0 012222222211110000000000000000 001234567 899
Q ss_pred CceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 244 CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 244 ~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+|+|+|+|++|.++ +..+.+.+.+++.....+.++++||++++ +|++|++.|.+||+
T Consensus 239 ~P~Lvi~G~~D~~~~~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 239 GPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp SCEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred CCeEEEEeCCCcccChHHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 99999999999988 55667888888733344447899999999 99999999999986
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=252.07 Aligned_cols=256 Identities=13% Similarity=0.063 Sum_probs=169.8
Q ss_pred eEEeCCCeeEEEEEc--cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~--g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.++..+|.+++|... | +++|+|||+||++.++.. |..+ ...+.++|+||++|+||||.|+.+ ...|
T Consensus 7 ~~~~~~g~~l~y~~~~~G-~~~p~vvllHG~~~~~~~------w~~~-~~~L~~~~rvia~DlrGhG~S~~~----~~~~ 74 (276)
T 2wj6_A 7 HETLVFDNKLSYIDNQRD-TDGPAILLLPGWCHDHRV------YKYL-IQELDADFRVIVPNWRGHGLSPSE----VPDF 74 (276)
T ss_dssp EEEEETTEEEEEEECCCC-CSSCEEEEECCTTCCGGG------GHHH-HHHHTTTSCEEEECCTTCSSSCCC----CCCC
T ss_pred eEEeeCCeEEEEEEecCC-CCCCeEEEECCCCCcHHH------HHHH-HHHHhcCCEEEEeCCCCCCCCCCC----CCCC
Confidence 456778999999998 7 456899999999988755 5444 455677899999999999999743 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
+++++++|+.++++++++++++|+||||||.+|+.+|.++ |++|+++|++++........ ... .............
T Consensus 75 ~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 151 (276)
T 2wj6_A 75 GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPD-FAK--SLTLLKDPERWRE 151 (276)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHH-HHH--HHHHHHCTTTHHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCch-HHH--HhhhccCcchHHH
Confidence 9999999999999999999999999999999999999999 99999999999765332211 110 0000000000000
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHH----HhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE----AINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
....+...++.. . ..+...+.+...........+..... .+....+..+.+.++++|+++++|..|.
T Consensus 152 -~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~ 222 (276)
T 2wj6_A 152 -GTHGLFDVWLDG-H-------DEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQP 222 (276)
T ss_dssp -HHHHHHHHHHTT-B-------CCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCS
T ss_pred -HHHHHHHHhhcc-c-------chHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCc
Confidence 011122222211 0 02222232222221111111111111 1100112345677899999998864333
Q ss_pred cc----hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 256 FH----SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 256 ~~----~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.. ...+.+.+.+++ +++++++++||++++|+|++|++.|.+||++.+
T Consensus 223 ~~~~~~~~~~~~~~~~p~--a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~~ 273 (276)
T 2wj6_A 223 TEPEYEKINSDFAEQHPW--FSYAKLGGPTHFPAIDVPDRAAVHIREFATAIR 273 (276)
T ss_dssp CSHHHHHHHHHHHHHCTT--EEEEECCCSSSCHHHHSHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhhCCC--eEEEEeCCCCCcccccCHHHHHHHHHHHHhhcc
Confidence 22 234567777887 999999999999999999999999999998764
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=253.21 Aligned_cols=265 Identities=13% Similarity=0.140 Sum_probs=173.0
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-CCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPV 99 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~-~~~~ 99 (349)
+..++..+|.+++|...| ++|+|||+||+++++.. |...+ ..+.+.|+||++|+||||.|+.+ .. ....
T Consensus 10 ~~~~~~~~g~~l~y~~~G--~g~~lvllHG~~~~~~~------w~~~~-~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~ 79 (294)
T 1ehy_A 10 KHYEVQLPDVKIHYVREG--AGPTLLLLHGWPGFWWE------WSKVI-GPLAEHYDVIVPDLRGFGDSEKP-DLNDLSK 79 (294)
T ss_dssp CEEEEECSSCEEEEEEEE--CSSEEEEECCSSCCGGG------GHHHH-HHHHTTSEEEEECCTTSTTSCCC-CTTCGGG
T ss_pred ceeEEEECCEEEEEEEcC--CCCEEEEECCCCcchhh------HHHHH-HHHhhcCEEEecCCCCCCCCCCC-ccccccC
Confidence 456788899999999998 67899999999988755 54443 55566799999999999999853 10 0115
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH---------Hhh--h-hh
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---------WLY--N-KV 167 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~--~-~~ 167 (349)
++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++......... +.. . ..
T Consensus 80 ~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 80 YSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp GCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred cCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 89999999999999999999999999999999999999999999999999997432111100 000 0 00
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhcC-CCCh--hhhccccC
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAING-RPDI--SEGLRKLQ 243 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~--~~~l~~i~ 243 (349)
....+. ....... ......++.. ... ......++..+.+...+.... .......+..... .... ...+.+++
T Consensus 160 ~~~~~~-~~~~~~~-~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 235 (294)
T 1ehy_A 160 MAVEVV-GSSREVC-KKYFKHFFDH-WSY-RDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSD 235 (294)
T ss_dssp HHHHHH-TSCHHHH-HHHHHHHHHH-TSS-SSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBC
T ss_pred hhHHHh-ccchhHH-HHHHHHHhhc-ccC-CCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCC
Confidence 000000 0110000 1111222211 110 001113333344433332111 1111122222211 0111 12455899
Q ss_pred CceEEEEeCCCccch---hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 244 CRSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 244 ~Pvlii~g~~D~~~~---~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+|+|+|+|++|.+++ ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||+
T Consensus 236 ~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 236 LPVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294 (294)
T ss_dssp SCEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred CCEEEEEeCCCCCcchHHHHHHHHHHcCC--CceEEeCCCCCChhhhCHHHHHHHHHHHhC
Confidence 999999999999875 35667777777 999999999999999999999999999973
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-36 Score=255.34 Aligned_cols=259 Identities=18% Similarity=0.194 Sum_probs=174.8
Q ss_pred Ccee--EEeCCC-eeEEEEEccCCCCCeEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 20 GKDN--LIKTSH-GSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 20 ~~~~--~i~~~~-~~l~~~~~g~~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
...+ ++.++| .+++|...|++.+|+|||+||++ .+... |...+ ..+.++|+|+++|+||||.|+.+.
T Consensus 11 ~~~~~~~~~~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~------w~~~~-~~L~~~~~via~Dl~G~G~S~~~~ 83 (291)
T 2wue_A 11 STSRFAEVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTN------FSRNI-AVLARHFHVLAVDQPGYGHSDKRA 83 (291)
T ss_dssp HHEEEEEEESSSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHH------TTTTH-HHHTTTSEEEEECCTTSTTSCCCS
T ss_pred ccccceEEEeCCcEEEEEEecCCCCCCcEEEECCCCCccchHHH------HHHHH-HHHHhcCEEEEECCCCCCCCCCCC
Confidence 3455 788899 99999999954445999999997 44433 54443 455667999999999999997432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC-h----hHHhhhhhh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-W----TEWLYNKVM 168 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~----~~~~~~~~~ 168 (349)
...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... . .... ...
T Consensus 84 ---~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~ 158 (291)
T 2wue_A 84 ---EHGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGV--KRL 158 (291)
T ss_dssp ---CCSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHH--HHH
T ss_pred ---CCCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhh--HHH
Confidence 22589999999999999999999999999999999999999999999999999998764221 0 0100 111
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHH---hcC--C--CChhhhccc
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA---ING--R--PDISEGLRK 241 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--~~~~~~l~~ 241 (349)
...+. ....... ......++..... ..++......... ............ ... . ....+.+.+
T Consensus 159 ~~~~~-~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (291)
T 2wue_A 159 SKFSV-APTRENL-EAFLRVMVYDKNL------ITPELVDQRFALA--STPESLTATRAMGKSFAGADFEAGMMWREVYR 228 (291)
T ss_dssp HHHHH-SCCHHHH-HHHHHTSCSSGGG------SCHHHHHHHHHHH--TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGG
T ss_pred HHHhc-cCCHHHH-HHHHHHhccCccc------CCHHHHHHHHHHh--cCchHHHHHHHHHhhccccccccchhHHHHhh
Confidence 11110 0100111 1111211111010 1222222222211 111111111111 111 0 112256889
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+++|+|+|+|++|.++ ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 229 i~~P~lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 229 LRQPVLLIWGREDRVNPLDGALVALKTIPR--AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp CCSCEEEEEETTCSSSCGGGGHHHHHHSTT--EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred CCCCeEEEecCCCCCCCHHHHHHHHHHCCC--CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999999999988 566778888887 9999999999999999999999999999975
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=259.40 Aligned_cols=269 Identities=13% Similarity=0.134 Sum_probs=174.0
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+..++.++|.+++|...|++.+|+|||+||+++++.. |..+ ...+.++|+||++|+||||.|+.+ ...+
T Consensus 8 ~~~~~~~~g~~l~y~~~G~g~~~pvvllHG~~~~~~~------w~~~-~~~L~~~~~via~Dl~G~G~S~~~----~~~~ 76 (316)
T 3afi_E 8 EIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHI------WRNI-LPLVSPVAHCIAPDLIGFGQSGKP----DIAY 76 (316)
T ss_dssp --CEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------GTTT-HHHHTTTSEEEEECCTTSTTSCCC----SSCC
T ss_pred cceeEEeCCEEEEEEEeCCCCCCeEEEECCCCCchHH------HHHH-HHHHhhCCEEEEECCCCCCCCCCC----CCCC
Confidence 4456788999999999995433499999999988755 5444 355667799999999999999742 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh---------hhhhhhHH
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL---------YNKVMSNL 171 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---------~~~~~~~~ 171 (349)
+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++......+.... ........
T Consensus 77 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
T 3afi_E 77 RFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAV 156 (316)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHH
Confidence 999999999999999999999999999999999999999999999999999743211111000 00000000
Q ss_pred HHhcCcchhHH------HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcC----------CCC
Q 018916 172 LYYYGMCGVVK------ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING----------RPD 234 (349)
Q Consensus 172 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~ 234 (349)
+.......... ..+...++.. ... ....++..+.+...+... ...........+.. ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T 3afi_E 157 FRKFRTPGEGEAMILEANAFVERVLPG-GIV---RKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQS 232 (316)
T ss_dssp HHHHTSTTHHHHHHTTSCHHHHTTTGG-GCS---SCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHH
T ss_pred HHHhcCCchhhHHHhccchHHHHhccc-ccC---CCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHH
Confidence 00000000000 0011111110 000 011222223322211100 00011110000000 001
Q ss_pred hhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcccc
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 306 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 306 (349)
..+.+.++++|+|+|+|++|.++ ...+.+.+.+++ .++++++++||++++|+|++|++.|.+||++....
T Consensus 233 ~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (316)
T 3afi_E 233 AHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTR--CALIRLGAGLHYLQEDHADAIGRSVAGWIAGIEAV 304 (316)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSS--EEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCC--CeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcCCC
Confidence 23446679999999999999988 466778888887 99999999999999999999999999999976533
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=248.17 Aligned_cols=257 Identities=12% Similarity=0.124 Sum_probs=171.4
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
++..+|.+++|...| ++++|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...++++
T Consensus 3 ~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~ 70 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADM------WEYQMEYLSSRGYRTIAFDRRGFGRSDQP----WTGNDYD 70 (271)
T ss_dssp EECTTSCEEEEEEES--SSSEEEEECCTTCCGGG------GHHHHHHHHTTTCEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred EEcCCCCEEEEEccC--CCCeEEEECCCCCcHHH------HHHHHHHHHhCCceEEEecCCCCccCCCC----CCCCCHH
Confidence 455688899999999 67899999999988755 55555666678999999999999998743 2357999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCC--------hhHHhhhhhhhHHHHh
Q 018916 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYY 174 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~ 174 (349)
++++|+.+++++++.++++|+||||||.+++.+++++ |++|+++|++++...... ...... ..+...+..
T Consensus 71 ~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 149 (271)
T 3ia2_A 71 TFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVF-ARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHH-HHHHHHHHh
Confidence 9999999999999999999999999999877777665 899999999997653210 000000 000000000
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
....... .+...++.. ... ....+........................+.. .+..+.+.++++|+|+|+|++|
T Consensus 150 -~~~~~~~-~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~Lvi~G~~D 222 (271)
T 3ia2_A 150 -DRAQFIS-DFNAPFYGI-NKG---QVVSQGVQTQTLQIALLASLKATVDCVTAFAE-TDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp -HHHHHHH-HHHHHHHTG-GGT---CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CBCHHHHTTCCSCEEEEEETTC
T ss_pred -hHHHHHH-HhhHhhhcc-ccc---cccCHHHHHHHHhhhhhccHHHHHHHHHHhhc-cCCcccccCCCCCEEEEEeCCC
Confidence 0000000 111112221 100 01122222222221111222222223333322 4566778899999999999999
Q ss_pred ccc--hh-HHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 255 PFH--SE-AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 255 ~~~--~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
.++ +. .+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 223 ~~~p~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 223 QIVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CcCChHHHHHHHHHhCCC--ceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 998 33 3345566676 9999999999999999999999999999964
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=252.23 Aligned_cols=256 Identities=11% Similarity=0.104 Sum_probs=173.7
Q ss_pred CCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
.+|.+++|...| ++++|||+||++.+... |...+..+.++||+|+++|+||||.|+.+ ...+++++++
T Consensus 10 ~~g~~l~y~~~g--~g~pvvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~a 77 (277)
T 1brt_A 10 STSIDLYYEDHG--TGQPVVLIHGFPLSGHS------WERQSAALLDAGYRVITYDRRGFGQSSQP----TTGYDYDTFA 77 (277)
T ss_dssp TEEEEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCcEEEEEEcC--CCCeEEEECCCCCcHHH------HHHHHHHHhhCCCEEEEeCCCCCCCCCCC----CCCccHHHHH
Confidence 466789999988 56789999999988755 54555566667999999999999999743 2358999999
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCCCCCCh----h----HHhhhhhhhHHHHhcCc
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPSW----T----EWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~ 177 (349)
+|+.+++++++.++++|+||||||.+|+.+|.++|+ +|+++|++++....... . .......+...+.. ..
T Consensus 78 ~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 156 (277)
T 1brt_A 78 ADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA-DR 156 (277)
T ss_dssp HHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHH-CH
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhc-Cc
Confidence 999999999999999999999999999999999999 99999999985432100 0 00000000010000 00
Q ss_pred chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc
Q 018916 178 CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 257 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 257 (349)
..... .+...++.. .... .....++..+.+..................+ ..+..+.+.++++|+|+|+|++|.++
T Consensus 157 ~~~~~-~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~ 231 (277)
T 1brt_A 157 YAFYT-GFFNDFYNL-DENL-GTRISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGDRTL 231 (277)
T ss_dssp HHHHH-HHHHHHTTH-HHHB-TTTBCHHHHHHHHHHHHHSCHHHHHHGGGGT--TCCCTTTGGGCCSCEEEEEETTCSSS
T ss_pred hhhHH-HHHHHHhhc-cccc-cccCCHHHHHHHHHHHhccchHHHHHHHHHH--hccchhhcccCCCCeEEEecCCCccC
Confidence 01111 111222221 0000 0011233333333322222222222222222 24556678899999999999999988
Q ss_pred --hhH-HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 258 --SEA-VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 258 --~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+.. +.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 232 PIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CGGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHCCC--CcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 445 778888887 9999999999999999999999999999963
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=248.19 Aligned_cols=258 Identities=11% Similarity=0.143 Sum_probs=171.6
Q ss_pred eCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHH
Q 018916 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 105 (349)
..+|.+++|...|++++++|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...++++++
T Consensus 5 ~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 74 (275)
T 1a88_A 5 TSDGTNIFYKDWGPRDGLPVVFHHGWPLSADD------WDNQMLFFLSHGYRVIAHDRRGHGRSDQP----STGHDMDTY 74 (275)
T ss_dssp CTTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred ccCCCEEEEEEcCCCCCceEEEECCCCCchhh------HHHHHHHHHHCCceEEEEcCCcCCCCCCC----CCCCCHHHH
Confidence 34677899999997778999999999888754 54555566677999999999999998743 235899999
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCC--------hhHHhhhhhhhHHHHhcC
Q 018916 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 176 (349)
++|+.+++++++.++++++||||||.+++.+++++ |++|+++|++++...... ...... ..+...+. ..
T Consensus 75 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 152 (275)
T 1a88_A 75 AADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVF-DEFRAALA-AN 152 (275)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHH-HHHHHHHH-HC
T ss_pred HHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHH-HHHHHHHh-hh
Confidence 99999999999999999999999999999988886 999999999997543210 000000 00000000 00
Q ss_pred cchhHHHHHHH-hhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 177 MCGVVKELLLK-RYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 177 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
....... +.. .++.. .. ......++..+.+..................+.. .+..+.+.++++|+|+|+|++|.
T Consensus 153 ~~~~~~~-~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~ 227 (275)
T 1a88_A 153 RAQFYID-VPSGPFYGF-NR--EGATVSQGLIDHWWLQGMMGAANAHYECIAAFSE-TDFTDDLKRIDVPVLVAHGTDDQ 227 (275)
T ss_dssp HHHHHHH-HHHTTTTTT-TS--TTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCS
T ss_pred HHHHHHh-hhccccccc-cC--cccccCHHHHHHHHHHhhhcchHhHHHHHhhhhh-cccccccccCCCCEEEEecCCCc
Confidence 0000110 111 11111 00 0001123333332221111111122222222222 35566788999999999999999
Q ss_pred cc--h-hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 256 FH--S-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 256 ~~--~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++ . ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 228 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 228 VVPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp SSCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred cCCcHHHHHHHHhhCCC--cEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 88 3 23446666776 9999999999999999999999999999963
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=251.54 Aligned_cols=264 Identities=15% Similarity=0.184 Sum_probs=174.1
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhh-hhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~-~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+..++..+|.+++|...|++++|+|||+||++.+... |...+ ..+.++||+||++|+||||.|+... .....
T Consensus 2 ~~~~~~~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~------w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~-~~~~~ 74 (298)
T 1q0r_A 2 SERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALG------WPDEFARRLADGGLHVIRYDHRDTGRSTTRD-FAAHP 74 (298)
T ss_dssp CEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------SCHHHHHHHHTTTCEEEEECCTTSTTSCCCC-TTTSC
T ss_pred CCceeccCCeEEEEEeccCCCCCeEEEEcCCCCCccc------hHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC-CCcCC
Confidence 3456778999999999997778999999999988754 55544 4555668999999999999997411 12235
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHH----------------h
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW----------------L 163 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----------------~ 163 (349)
++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.......... .
T Consensus 75 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
T 1q0r_A 75 YGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 154 (298)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred cCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccc
Confidence 899999999999999999999999999999999999999999999999999987621100000 0
Q ss_pred hhhhhhHHHHh---cCcchhHHHHHHH--hhcccccccCCCCCCchH-HHHHHHHhhhhc-cchhH-HHHHHHhcCCCCh
Q 018916 164 YNKVMSNLLYY---YGMCGVVKELLLK--RYFSKQEVRGNAQVPESD-IVQACRRLLDER-QSSNV-WHFLEAINGRPDI 235 (349)
Q Consensus 164 ~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 235 (349)
....+...... ........+.... ..+..... ...++ ..+.+...+... ..... ...+. .....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 228 (298)
T 1q0r_A 155 QQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGV-----PFDDAEYARWEERAIDHAGGVLAEPYAHYS-LTLPPPS 228 (298)
T ss_dssp CHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSS-----CCCHHHHHHHHHHHHHHTTTCCSCCCGGGG-CCCCCGG
T ss_pred cHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCC-----CCCHHHHHHHHHHHhhccCCccchhhhhhh-hhcCccc
Confidence 00000000000 0000000000100 00100000 01222 222222221111 11111 11111 1122345
Q ss_pred hhh-ccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 236 SEG-LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 236 ~~~-l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+. +.++++|+|+|+|++|.++ ...+.+.+.+++ +++++++++|| |.|+++++.|.+||++.
T Consensus 229 ~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 229 RAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEIPGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT--EEEEEETTCCS----SCCGGGHHHHHHHHHHH
T ss_pred ccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCC--CEEEEcCCCCC----CCcHHHHHHHHHHHHHH
Confidence 566 8899999999999999988 566778888887 99999999999 78999999999999875
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-35 Score=247.34 Aligned_cols=256 Identities=16% Similarity=0.193 Sum_probs=171.7
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
.+.+++|...| ++++|||+||++++... |...+ ..+.++|+|+++|+||||.|..+. ...++++++++
T Consensus 4 ~~~~~~y~~~G--~g~~vvllHG~~~~~~~------~~~~~-~~L~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~~ 71 (269)
T 2xmz_A 4 THYKFYEANVE--TNQVLVFLHGFLSDSRT------YHNHI-EKFTDNYHVITIDLPGHGEDQSSM---DETWNFDYITT 71 (269)
T ss_dssp CSEEEECCSSC--CSEEEEEECCTTCCGGG------GTTTH-HHHHTTSEEEEECCTTSTTCCCCT---TSCCCHHHHHH
T ss_pred ccceEEEEEcC--CCCeEEEEcCCCCcHHH------HHHHH-HHHhhcCeEEEecCCCCCCCCCCC---CCccCHHHHHH
Confidence 34578888877 45689999999988755 43433 455667999999999999987432 11589999999
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh----hhhHHHHhcCcchhHHH
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK----VMSNLLYYYGMCGVVKE 183 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 183 (349)
|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.............. .....+..... .
T Consensus 72 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 146 (269)
T 2xmz_A 72 LLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGI-----E 146 (269)
T ss_dssp HHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCH-----H
T ss_pred HHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccH-----H
Confidence 99999999999999999999999999999999999999999999876543322211100 00000000011 1
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc--CCCChhhhccccCCceEEEEeCCCccc-hhH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH-SEA 260 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~ 260 (349)
.+...+.....+... ....++..+.+...........+...+.... ...+..+.+.++++|+++|+|++|.++ ...
T Consensus 147 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 225 (269)
T 2xmz_A 147 LFVNDWEKLPLFQSQ-LELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIA 225 (269)
T ss_dssp HHHHHHTTSGGGGGG-GGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHH
T ss_pred HHHHHHHhCcccccc-ccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHH
Confidence 122222211011100 0002222222222222222223333333322 223456678899999999999999988 333
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.++.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 226 ~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 226 KKMANLIPN--SKCKLISATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHHHHSTT--EEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCC--cEEEEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 457777777 99999999999999999999999999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=247.24 Aligned_cols=268 Identities=29% Similarity=0.514 Sum_probs=183.7
Q ss_pred ceeEEeCCCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
..+.+.+++.+++|...|++ ++|+|||+||++++...++... |...+...+.++|+|+++|+||||.|..+.+....
T Consensus 12 ~~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~ 90 (286)
T 2qmq_A 12 HTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPL-FRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQ 90 (286)
T ss_dssp EEEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHH-HTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCC
T ss_pred cccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhh-hhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCC
Confidence 44567778999999999975 6899999999999876533322 21112455667899999999999988754332222
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.++++++++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.........+.... . .....
T Consensus 91 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-----~-~~~~~ 164 (286)
T 2qmq_A 91 YPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHK-----L-TGLTS 164 (286)
T ss_dssp CCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHH-----H-HHTTS
T ss_pred ccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhh-----h-ccccc
Confidence 25999999999999999999999999999999999999999999999999999987665543322111 0 11111
Q ss_pred hhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhcCCCC---hhhhccccCCceEEEEeCCC
Q 018916 179 GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGRPD---ISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~l~~i~~Pvlii~g~~D 254 (349)
. ..+.....++.. .... ..++..+.+...+.... ..........+....+ ....+.++++|+|+|+|++|
T Consensus 165 ~-~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 238 (286)
T 2qmq_A 165 S-IPDMILGHLFSQ-EELS----GNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQA 238 (286)
T ss_dssp C-HHHHHHHHHSCH-HHHH----TTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTS
T ss_pred c-chHHHHHHHhcC-CCCC----cchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCC
Confidence 1 112233334433 1111 02344444444443222 2222222222222122 24567899999999999999
Q ss_pred ccchhHHH-HHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 255 PFHSEAVH-MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 255 ~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
.+++...+ +.+.++ .++++++++++||+++.|+|+++++.|.+||++
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 286 (286)
T 2qmq_A 239 PHEDAVVECNSKLDP-TQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286 (286)
T ss_dssp TTHHHHHHHHHHSCG-GGEEEEEETTCTTCHHHHCHHHHHHHHHHHHCC
T ss_pred ccccHHHHHHHHhcC-CCceEEEeCCCCCcccccChHHHHHHHHHHhcC
Confidence 99853333 444444 139999999999999999999999999999963
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=245.03 Aligned_cols=256 Identities=14% Similarity=0.171 Sum_probs=169.4
Q ss_pred eCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHH
Q 018916 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 105 (349)
..+|.+++|...| ++|+|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...++++++
T Consensus 5 ~~~g~~l~y~~~g--~~~~vvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 72 (273)
T 1a8s_A 5 TRDGTQIYYKDWG--SGQPIVFSHGWPLNADS------WESQMIFLAAQGYRVIAHDRRGHGRSSQP----WSGNDMDTY 72 (273)
T ss_dssp CTTSCEEEEEEES--CSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred cCCCcEEEEEEcC--CCCEEEEECCCCCcHHH------HhhHHhhHhhCCcEEEEECCCCCCCCCCC----CCCCCHHHH
Confidence 3467789999988 67899999999988755 54555566677999999999999998743 235899999
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCC--------hhHHhhhhhhhHHHHhcC
Q 018916 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 176 (349)
++|+.+++++++.++++|+||||||.+|+.+++++ |++|+++|++++...... ...... ..+...... .
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 150 (273)
T 1a8s_A 73 ADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVF-DGIRQASLA-D 150 (273)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHH-H
T ss_pred HHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHH-HHHHHHhHh-h
Confidence 99999999999999999999999999999988887 999999999997543210 000000 000000000 0
Q ss_pred cchhHHHHHHH-hhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 177 MCGVVKELLLK-RYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 177 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
...... .+.. .++.. .. ......++..+.+..................+.. .+..+.+.++++|+|+|+|++|.
T Consensus 151 ~~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
T 1a8s_A 151 RSQLYK-DLASGPFFGF-NQ--PGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TDFTEDLKKIDVPTLVVHGDADQ 225 (273)
T ss_dssp HHHHHH-HHHHTTSSST-TS--TTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHTCCSCEEEEEETTCS
T ss_pred HHHHHH-HhhcccccCc-CC--cccccCHHHHHHHHHhccccchhHHHHHHHHHhc-cChhhhhhcCCCCEEEEECCCCc
Confidence 000000 0111 11111 00 0001122333322221111111222222222222 34566788999999999999999
Q ss_pred cc--h-hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 256 FH--S-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 256 ~~--~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++ . ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 226 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 226 VVPIEASGIASAALVKG--STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp SSCSTTTHHHHHHHSTT--CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred cCChHHHHHHHHHhCCC--cEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 88 3 33456666776 9999999999999999999999999999963
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=245.08 Aligned_cols=256 Identities=13% Similarity=0.121 Sum_probs=169.8
Q ss_pred eCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHH
Q 018916 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 105 (349)
..+|.+++|...| ++++|||+||++.++.. |...+..+.++||+|+++|+||||.|..+ ...++++++
T Consensus 5 ~~~g~~l~y~~~g--~g~~vvllHG~~~~~~~------w~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 72 (274)
T 1a8q_A 5 TRDGVEIFYKDWG--QGRPVVFIHGWPLNGDA------WQDQLKAVVDAGYRGIAHDRRGHGHSTPV----WDGYDFDTF 72 (274)
T ss_dssp CTTSCEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred ccCCCEEEEEecC--CCceEEEECCCcchHHH------HHHHHHHHHhCCCeEEEEcCCCCCCCCCC----CCCCcHHHH
Confidence 3467789999988 67899999999988755 54555566677999999999999998743 235899999
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCC--------ChhHHhhhhhhhHHHHhcC
Q 018916 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 176 (349)
++|+.+++++++.++++|+||||||.+++.+++++ |++|+++|++++..... ....... ..+...+...
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 150 (274)
T 1a8q_A 73 ADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF-DALKNGVLTE- 150 (274)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHH-HHHHHHhhcc-
Confidence 99999999999999999999999999999988887 99999999999754221 0000000 0000000000
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
...... .+...++.. .... ....++..+.+..................+.. .+..+.+.++++|+|+|+|++|.+
T Consensus 151 ~~~~~~-~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~ 225 (274)
T 1a8q_A 151 RSQFWK-DTAEGFFSA-NRPG--NKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGY-TDFTEDLKKFDIPTLVVHGDDDQV 225 (274)
T ss_dssp HHHHHH-HHHHHHTTT-TSTT--CCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSS
T ss_pred HHHHHH-Hhccccccc-cccc--ccccHHHHHHHHHHhhhcChHHHHHHHhhhhc-CcHHHHhhcCCCCEEEEecCcCCC
Confidence 000000 111122221 1000 01123333332221111112222222222222 355677889999999999999998
Q ss_pred c--h-hHHHHHHHhcccceeEEEEcCCCCccccc--ChhhHHHHHHHHHhh
Q 018916 257 H--S-EAVHMTSKIDRRYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMG 302 (349)
Q Consensus 257 ~--~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 302 (349)
+ . ..+.+.+.+++ +++++++++||++++| +|+++++.|.+||++
T Consensus 226 ~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 226 VPIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp SCGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHhhCCC--ceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 8 2 23445666776 9999999999999999 999999999999963
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=245.57 Aligned_cols=268 Identities=13% Similarity=0.134 Sum_probs=171.2
Q ss_pred CceeEEeCCCeeEEEEEccCCCC-CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDK-PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~-p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
.+..++..+|.+++|...|++.+ ++|||+||++++...|+ ..+..++++||+|+++|+||||.|+.+. ..
T Consensus 5 ~~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~ 75 (293)
T 1mtz_A 5 CIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYL------LSLRDMTKEGITVLFYDQFGCGRSEEPD---QS 75 (293)
T ss_dssp CEEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGG------GGGGGGGGGTEEEEEECCTTSTTSCCCC---GG
T ss_pred hcceEEEECCEEEEEEEECCCCCCCeEEEEeCCCCcchhHH------HHHHHHHhcCcEEEEecCCCCccCCCCC---CC
Confidence 35677888999999999996544 79999999765554432 2335666779999999999999987432 23
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh------hhHH
Q 018916 99 VLSVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV------MSNL 171 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~ 171 (349)
.++++++++|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++......+........ ....
T Consensus 76 ~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (293)
T 1mtz_A 76 KFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDA 155 (293)
T ss_dssp GCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHH
Confidence 489999999999999999 999999999999999999999999999999999998764211111000000 0000
Q ss_pred HH---h-cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHH-------HhcCCCChhhhcc
Q 018916 172 LY---Y-YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE-------AINGRPDISEGLR 240 (349)
Q Consensus 172 ~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~ 240 (349)
+. . ..............++.. ..... ....+.....+..... . ..+..... ......+..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 230 (293)
T 1mtz_A 156 IKKYGSSGSYENPEYQEAVNYFYHQ-HLLRS-EDWPPEVLKSLEYAER-R--NVYRIMNGPNEFTITGTIKDWDITDKIS 230 (293)
T ss_dssp HHHHHHHTCTTCHHHHHHHHHHHHH-HTSCS-SCCCHHHHHHHHHHHH-S--SHHHHHTCSBTTBCCSTTTTCBCTTTGG
T ss_pred HHHhhccCCcChHHHHHHHHHHHHh-hcccc-cCchHHHHHhHhhhcc-c--hhhhhccCcceecccccccCCChhhhhc
Confidence 00 0 000000000000011110 00000 0001111111110000 0 00000000 0001123456678
Q ss_pred ccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 241 KLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++++|+|+|+|++|.+. ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 231 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 231 AIKIPTLITVGEYDEVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp GCCSCEEEEEETTCSSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEeeCCCCCCHHHHHHHHHhCCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 89999999999999544 556678888887 99999999999999999999999999999864
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=245.64 Aligned_cols=253 Identities=12% Similarity=0.113 Sum_probs=180.7
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
++++++.+++|...|++++|+|||+||++.+... |... ...+.++|+|+++|+||||.|+.+ ...++++
T Consensus 3 ~~~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~------~~~~-~~~L~~~~~v~~~D~~G~G~S~~~----~~~~~~~ 71 (264)
T 3ibt_A 3 SLNVNGTLMTYSESGDPHAPTLFLLSGWCQDHRL------FKNL-APLLARDFHVICPDWRGHDAKQTD----SGDFDSQ 71 (264)
T ss_dssp CCEETTEECCEEEESCSSSCEEEEECCTTCCGGG------GTTH-HHHHTTTSEEEEECCTTCSTTCCC----CSCCCHH
T ss_pred eEeeCCeEEEEEEeCCCCCCeEEEEcCCCCcHhH------HHHH-HHHHHhcCcEEEEccccCCCCCCC----ccccCHH
Confidence 4566889999999998789999999999988755 4343 355677899999999999998853 3458999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHH
Q 018916 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (349)
++++++.+++++++.++++++||||||.+++.+|.++ |++|+++|++++.. ........ .+........... ..
T Consensus 72 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~---~~~~~~~~~~~~~-~~ 146 (264)
T 3ibt_A 72 TLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQ---QLAEGQHPTEYVA-GR 146 (264)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHH---HHHHTTCTTTHHH-HH
T ss_pred HHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcc---hhhcccChhhHHH-HH
Confidence 9999999999999999999999999999999999999 99999999999988 32221111 1111000011111 11
Q ss_pred HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcC----CCChhhhccccCCceEEEEeCCC--cc
Q 018916 183 ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING----RPDISEGLRKLQCRSLIFVGESS--PF 256 (349)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvlii~g~~D--~~ 256 (349)
......++.. ...+...+.+...+.......+......+.. ..+..+.+.++++|+++++|..| ..
T Consensus 147 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~ 218 (264)
T 3ibt_A 147 QSFFDEWAET--------TDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQ 218 (264)
T ss_dssp HHHHHHHHTT--------CCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCH
T ss_pred HHHHHHhccc--------CCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccch
Confidence 2233334433 1255666666665554443333333222211 12344678899999999976443 33
Q ss_pred c--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 257 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
. ...+.+.+.+++ .++++++++||++++|+|+++++.|.+||++
T Consensus 219 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 219 DYRQLQLEFAAGHSW--FHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp HHHHHHHHHHHHCTT--EEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred hhHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 3 345667788887 8999999999999999999999999999863
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=244.26 Aligned_cols=263 Identities=14% Similarity=0.112 Sum_probs=173.5
Q ss_pred CCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
+..+.+++..++.+++|...|+++.|+|||+||++ .+... |...+ ..+.++|+|+++|+||||.|..+.
T Consensus 5 ~~~~~~~~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~~~------~~~~~-~~L~~~~~vi~~D~~G~G~S~~~~- 76 (285)
T 1c4x_A 5 VEIIEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASN------WRPII-PDLAENFFVVAPDLIGFGQSEYPE- 76 (285)
T ss_dssp CCCEEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHH------HGGGH-HHHHTTSEEEEECCTTSTTSCCCS-
T ss_pred ccccceEEEECCEEEEEEecCCCCCCEEEEEeCCCCCCcchhh------HHHHH-HHHhhCcEEEEecCCCCCCCCCCC-
Confidence 44457788889999999999854445599999997 44333 43333 445667999999999999987432
Q ss_pred CCCCCCCHHHH----HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh-hHHhhhhhhh
Q 018916 95 DDEPVLSVDDL----ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMS 169 (349)
Q Consensus 95 ~~~~~~~~~~~----~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~ 169 (349)
...++++++ ++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... .... ....
T Consensus 77 --~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~ 152 (285)
T 1c4x_A 77 --TYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPEL--ARLL 152 (285)
T ss_dssp --SCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHH--HHHH
T ss_pred --CcccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhH--HHHH
Confidence 224899999 999999999999999999999999999999999999999999999987643211 1100 0000
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh---cC----CCChhhhcccc
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI---NG----RPDISEGLRKL 242 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~l~~i 242 (349)
..+. ........ .....++...... ...++......... ............+ .. ..+..+.+.++
T Consensus 153 ~~~~-~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 224 (285)
T 1c4x_A 153 AFYA-DPRLTPYR-ELIHSFVYDPENF----PGMEEIVKSRFEVA--NDPEVRRIQEVMFESMKAGMESLVIPPATLGRL 224 (285)
T ss_dssp TGGG-SCCHHHHH-HHHHTTSSCSTTC----TTHHHHHHHHHHHH--HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTC
T ss_pred HHhc-cccHHHHH-HHHHHhhcCcccc----cCcHHHHHHHHHhc--cCHHHHHHHHHHhccccccccccccchhhhccC
Confidence 0000 00001111 1111111110000 00122222111111 1111111111111 11 11233567889
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++|+|+|+|++|.++ ...+.+.+.+++ .++++++++||++++|+|+++++.|.+||++
T Consensus 225 ~~P~lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 225 PHDVLVFHGRQDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHhCCC--ceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 999999999999998 456678888887 9999999999999999999999999999974
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=245.31 Aligned_cols=250 Identities=15% Similarity=0.167 Sum_probs=167.4
Q ss_pred EEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018916 33 SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (349)
Q Consensus 33 ~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~ 112 (349)
+|...|+ ++|+|||+||++.++.. |... ...+.++|+|+++|+||||.|+.+.......++++++++|+.++
T Consensus 12 ~~~~~G~-g~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~ 83 (271)
T 1wom_A 12 HVKVKGS-GKASIMFAPGFGCDQSV------WNAV-APAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDV 83 (271)
T ss_dssp TCEEEEC-CSSEEEEECCTTCCGGG------GTTT-GGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHH
T ss_pred eeEeecC-CCCcEEEEcCCCCchhh------HHHH-HHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHH
Confidence 4555663 45899999999988755 4333 35566789999999999999874321112346999999999999
Q ss_pred HHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh-HH---hhh---hhhhHHHHhcCcchhHHHHH
Q 018916 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-EW---LYN---KVMSNLLYYYGMCGVVKELL 185 (349)
Q Consensus 113 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~---~~~---~~~~~~~~~~~~~~~~~~~~ 185 (349)
+++++.++++|+||||||.+|+.+|.++|++|+++|++++........ .+ ... ......+. ....... ..+
T Consensus 84 l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 161 (271)
T 1wom_A 84 CEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMME-KNYIGWA-TVF 161 (271)
T ss_dssp HHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHH-HCHHHHH-HHH
T ss_pred HHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHh-hhHHHHH-HHH
Confidence 999999999999999999999999999999999999999864321100 00 000 00000000 0000000 001
Q ss_pred HHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHH
Q 018916 186 LKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 263 (349)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~ 263 (349)
....+.. ...++..+.+...+................. .+....+.++++|+++|+|++|.++ ...+.+
T Consensus 162 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~ 232 (271)
T 1wom_A 162 AATVLNQ--------PDRPEIKEELESRFCSTDPVIARQFAKAAFF-SDHREDLSKVTVPSLILQCADDIIAPATVGKYM 232 (271)
T ss_dssp HHHHHCC--------TTCHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHH
T ss_pred HHHHhcC--------CCchHHHHHHHHHHhcCCcHHHHHHHHHHhC-cchHHhccccCCCEEEEEcCCCCcCCHHHHHHH
Confidence 1111111 0123334444433332222222222222222 4566778899999999999999998 456668
Q ss_pred HHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 264 TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 264 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+++ .++++++++||++++|+|+++++.|.+||++.
T Consensus 233 ~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 233 HQHLPY--SSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHCCC--CEEEEeCCCCcCccccCHHHHHHHHHHHHHhc
Confidence 888887 99999999999999999999999999999864
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=242.76 Aligned_cols=259 Identities=16% Similarity=0.205 Sum_probs=172.5
Q ss_pred eeEEeCC--C--eeEEEEEccCCCCC-eEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 22 DNLIKTS--H--GSLSVTIYGDQDKP-ALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 22 ~~~i~~~--~--~~l~~~~~g~~~~p-~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
..+++++ | .+++|...|+ ++ +|||+||++ .+... |...+...+.++|+|+++|+||||.|+.+.
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~--g~~~vvllHG~~~~~~~~~~------~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 84 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ--GDETVVLLHGSGPGATGWAN------FSRNIDPLVEAGYRVILLDCPGWGKSDSVV 84 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC--CSSEEEEECCCSTTCCHHHH------TTTTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEEcCCCcEEEEEEeccCC--CCceEEEECCCCcccchhHH------HHHhhhHHHhcCCeEEEEcCCCCCCCCCCC
Confidence 5567776 8 8999999884 45 999999997 33322 444442556667999999999999987432
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHH---hhhhhhhH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYNKVMSN 170 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~ 170 (349)
...++++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.......... ........
T Consensus 85 ---~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (289)
T 1u2e_A 85 ---NSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQ 161 (289)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred ---ccccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHH
Confidence 225899999999999999999999999999999999999999999999999999987642110000 00001111
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc----CCCChhhhccccCCce
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPDISEGLRKLQCRS 246 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~Pv 246 (349)
... ........ .....++.. . ....++.......... .....+......+. ...+..+.+.++++|+
T Consensus 162 ~~~-~~~~~~~~-~~~~~~~~~-~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 232 (289)
T 1u2e_A 162 LYR-QPTIENLK-LMMDIFVFD-T-----SDLTDALFEARLNNML-SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQT 232 (289)
T ss_dssp HHH-SCCHHHHH-HHHHTTSSC-T-----TSCCHHHHHHHHHHHH-HTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCE
T ss_pred HHh-cchHHHHH-HHHHHhhcC-c-----ccCCHHHHHHHHHHhh-cChhHHHHHHHHHHhccccccchhhHHhhcCCCe
Confidence 110 01001111 111111111 0 0112222222221111 11222222222211 2234556788999999
Q ss_pred EEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 247 LIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 247 lii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
|+|+|++|.++ +..+.+.+.+++ .++++++++||++++|+|+++++.|.+||++
T Consensus 233 lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 233 LIVWGRNDRFVPMDAGLRLLSGIAG--SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHSTT--CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred EEEeeCCCCccCHHHHHHHHhhCCC--cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 99999999998 566778888887 8999999999999999999999999999964
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=242.16 Aligned_cols=241 Identities=14% Similarity=0.208 Sum_probs=161.8
Q ss_pred eEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 31 SLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 31 ~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
+++|...|++ ++|+|||+||++++... |... ...+.+.|+|+++|+||||.|..+ ..++++++++
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~via~Dl~G~G~S~~~-----~~~~~~~~a~ 69 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDN------LGVL-ARDLVNDHNIIQVDVRNHGLSPRE-----PVMNYPAMAQ 69 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTT------THHH-HHHHTTTSCEEEECCTTSTTSCCC-----SCCCHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhH------HHHH-HHHHHhhCcEEEecCCCCCCCCCC-----CCcCHHHHHH
Confidence 4678888864 78899999999988754 5444 355566799999999999998742 1479999999
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC---hhHHhhhhhhhHHHHhcCcchhHHHH
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKEL 184 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+.... ..... ..+ ........... .
T Consensus 70 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~--~~~-~~~~~~~~~~~--~- 143 (255)
T 3bf7_A 70 DLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIF--AAI-NAVSESDAQTR--Q- 143 (255)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHH--HHH-HHHHHSCCCSH--H-
T ss_pred HHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHH--HHH-HhccccccccH--H-
Confidence 999999999999999999999999999999999999999999986543211 11111 000 00111111100 0
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhh----ccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDE----RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
.....+.. . .........+...+.. .........+..+... +.+.++++|+|+|+|++|.++ +
T Consensus 144 ~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~i~~P~l~i~G~~D~~~~~~ 212 (255)
T 3bf7_A 144 QAAAIMRQ-H------LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGW----EKIPAWDHPALFIPGGNSPYVSEQ 212 (255)
T ss_dssp HHHHHHTT-T------CCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCC----CCCCCCCSCEEEECBTTCSTTCGG
T ss_pred HHHHHHhh-h------cchhHHHHHHHHhccCCceeecHHHHHhhhhhcccc----ccccccCCCeEEEECCCCCCCCHH
Confidence 00111111 0 0012222222111110 0011111112222111 235688999999999999987 5
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
..+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 213 ~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 213 YRDDLLAQFPQ--ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp GHHHHHHHCTT--EEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCC--CeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 66778888887 9999999999999999999999999999975
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=243.39 Aligned_cols=255 Identities=15% Similarity=0.166 Sum_probs=174.1
Q ss_pred CCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
.++.+++|...| ++++|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...+++++++
T Consensus 10 ~~g~~l~y~~~g--~~~pvvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~ 77 (279)
T 1hkh_A 10 STPIELYYEDQG--SGQPVVLIHGYPLDGHS------WERQTRELLAQGYRVITYDRRGFGGSSKV----NTGYDYDTFA 77 (279)
T ss_dssp TEEEEEEEEEES--SSEEEEEECCTTCCGGG------GHHHHHHHHHTTEEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCeEEEEEecC--CCCcEEEEcCCCchhhH------HhhhHHHHHhCCcEEEEeCCCCCCCCCCC----CCCCCHHHHH
Confidence 456789999888 56789999999988755 54555566677999999999999998743 2358999999
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCCCCCC----hh----HHhhhhhhhHHHHhcCc
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPS----WT----EWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~ 177 (349)
+|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++...... .. .... ..+...+.. ..
T Consensus 78 ~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 155 (279)
T 1hkh_A 78 ADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVF-DGIEAAAKG-DR 155 (279)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH-HHHHHHHHH-CH
T ss_pred HHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHH-HHHHHHhhh-hh
Confidence 999999999999999999999999999999999999 9999999998543210 00 0000 000000000 00
Q ss_pred chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc---CCceEEEEeCCC
Q 018916 178 CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL---QCRSLIFVGESS 254 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~Pvlii~g~~D 254 (349)
..... .+...++....... ....++..+.+..................+ ..+..+.+.++ ++|+|+|+|++|
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~~~~P~lii~G~~D 230 (279)
T 1hkh_A 156 FAWFT-DFYKNFYNLDENLG--SRISEQAVTGSWNVAIGSAPVAAYAVVPAW--IEDFRSDVEAVRAAGKPTLILHGTKD 230 (279)
T ss_dssp HHHHH-HHHHHHHTHHHHBT--TTBCHHHHHHHHHHHHTSCTTHHHHTHHHH--TCBCHHHHHHHHHHCCCEEEEEETTC
T ss_pred hhhHH-HHHhhhhhcccCCc--ccccHHHHHhhhhhhccCcHHHHHHHHHHH--hhchhhhHHHhccCCCCEEEEEcCCC
Confidence 00111 11122222100000 011333333333333222333333333333 24556667788 999999999999
Q ss_pred ccc--hhH-HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 255 PFH--SEA-VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 255 ~~~--~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
.++ +.. +.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 231 NILPIDATARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp SSSCTTTTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred ccCChHHHHHHHHHhCCC--eeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 988 344 778888887 9999999999999999999999999999963
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=242.09 Aligned_cols=258 Identities=14% Similarity=0.087 Sum_probs=173.4
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
.+..++..+|.+++|...| ++++|||+||++ .+... |... ...+.++|+|+++|+||||.|. +.
T Consensus 16 ~~~~~~~~~g~~l~y~~~g--~g~~vvllHG~~~~~~~~~~------~~~~-~~~L~~~~~vi~~Dl~G~G~S~-~~--- 82 (296)
T 1j1i_A 16 YVERFVNAGGVETRYLEAG--KGQPVILIHGGGAGAESEGN------WRNV-IPILARHYRVIAMDMLGFGKTA-KP--- 82 (296)
T ss_dssp CEEEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHH------HTTT-HHHHTTTSEEEEECCTTSTTSC-CC---
T ss_pred CcceEEEECCEEEEEEecC--CCCeEEEECCCCCCcchHHH------HHHH-HHHHhhcCEEEEECCCCCCCCC-CC---
Confidence 4577888899999999988 468999999997 44333 4333 3555667999999999999987 32
Q ss_pred CCCCCHHHHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 97 EPVLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
...++++++++++.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++........... .. .+...
T Consensus 83 ~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~--~~---~~~~~ 157 (296)
T 1j1i_A 83 DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDL--RP---IINYD 157 (296)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------------CC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchH--HH---Hhccc
Confidence 2358999999999999999998 899999999999999999999999999999999876432211100 00 00000
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhh-hccchhHHHHHHHh---cCCCChhhhccccCCceEEEEe
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLD-ERQSSNVWHFLEAI---NGRPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~Pvlii~g 251 (349)
...... ......++.. . ....++.......... ......+...+... ....+..+.+.++++|+|+|+|
T Consensus 158 ~~~~~~-~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G 230 (296)
T 1j1i_A 158 FTREGM-VHLVKALTND-G-----FKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQG 230 (296)
T ss_dssp SCHHHH-HHHHHHHSCT-T-----CCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEE
T ss_pred CCchHH-HHHHHHhccC-c-----ccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEE
Confidence 000011 1112222211 0 0112222222211111 00011111111111 1112344567889999999999
Q ss_pred CCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 252 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 252 ~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
++|.++ +..+.+.+.+++ .++++++++||++++|+|+++++.|.+||++.-
T Consensus 231 ~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 231 KDDKVVPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp TTCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred CCCcccCHHHHHHHHHHCCC--CEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 999998 566678888887 899999999999999999999999999998763
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=243.66 Aligned_cols=267 Identities=12% Similarity=0.107 Sum_probs=184.8
Q ss_pred CCCCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC
Q 018916 15 TPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 15 ~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
...+..+.+++.++|.+++|...|++++|+|||+||++++... |... ...+.+||+|+++|+||||.|..+.
T Consensus 5 ~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~------~~~~-~~~l~~~~~v~~~d~~G~G~s~~~~- 76 (299)
T 3g9x_A 5 GTGFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYL------WRNI-IPHVAPSHRCIAPDLIGMGKSDKPD- 76 (299)
T ss_dssp CCCCCCCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCGGG------GTTT-HHHHTTTSCEEEECCTTSTTSCCCC-
T ss_pred CCCcccceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccHHH------HHHH-HHHHccCCEEEeeCCCCCCCCCCCC-
Confidence 3345567889999999999999998889999999999988755 3333 3455789999999999999987432
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh-hhhHHHH
Q 018916 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK-VMSNLLY 173 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~ 173 (349)
..++++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++.........+.... .....+.
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
T 3g9x_A 77 ---LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFR 153 (299)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHT
T ss_pred ---CcccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHc
Confidence 268999999999999999999999999999999999999999999999999999665544222211100 0000000
Q ss_pred hc--------CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCC----------CC
Q 018916 174 YY--------GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGR----------PD 234 (349)
Q Consensus 174 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~ 234 (349)
.. ...... .......+.. ....+....+....... ............... .+
T Consensus 154 ~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3g9x_A 154 TADVGRELIIDQNAFI-EGALPKCVVR--------PLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEA 224 (299)
T ss_dssp SSSHHHHHHTTSCHHH-HTHHHHTCSS--------CCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred CCCcchhhhccchhhH-HHhhhhhhcc--------CCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhh
Confidence 00 000001 1111111111 11333333333322221 111122222211110 12
Q ss_pred hhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
....+.++++|+++|+|++|.++ +..+.+.+.+++ +++++++++||++++|+|+++++.|.+|+.+.
T Consensus 225 ~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 225 YMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL 293 (299)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHHHCHHHHHHHHHHHSGGG
T ss_pred hhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCCC--CeEEEeCCCCCcchhcCHHHHHHHHHHHHhhh
Confidence 34457889999999999999998 566778888887 99999999999999999999999999998765
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=243.82 Aligned_cols=260 Identities=12% Similarity=0.140 Sum_probs=175.9
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+++++.+++++++|...| ++|+|||+||++.+... |... ...+.+||+|+++|+||||.|..+. ....+
T Consensus 4 ~~~~~~~~~~~~~y~~~g--~~~~vv~~HG~~~~~~~------~~~~-~~~L~~~~~vi~~d~~G~G~s~~~~--~~~~~ 72 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKG--EGPPLCVTHLYSEYNDN------GNTF-ANPFTDHYSVYLVNLKGCGNSDSAK--NDSEY 72 (278)
T ss_dssp EEEEEEETTEEEEEEEEC--SSSEEEECCSSEECCTT------CCTT-TGGGGGTSEEEEECCTTSTTSCCCS--SGGGG
T ss_pred ccCcEecCCceEEEEecC--CCCeEEEEcCCCcchHH------HHHH-HHHhhcCceEEEEcCCCCCCCCCCC--CcccC
Confidence 567899999999999998 78899999999888755 3333 3555569999999999999987532 23458
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh-----------HHhhhhhhh
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-----------EWLYNKVMS 169 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-----------~~~~~~~~~ 169 (349)
+++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++........ .........
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 73 SMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp SHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987621000 000000111
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHH-HhcCCCChhhhccccCCceE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLE-AINGRPDISEGLRKLQCRSL 247 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvl 247 (349)
..+............+...+... .. ..++....+...... .........+. ......+....+.++++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 225 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALM-SF------YSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSF 225 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHH-HC------SCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEE
T ss_pred HhhcccccCchHHHHHHHHHhhc-cc------CCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEE
Confidence 11111111111111111111111 00 011111111111100 00111222222 11122455677888999999
Q ss_pred EEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
+|+|++|.++ ...+.+.+.+++ +++++++++||++++++|+++++.|.+||
T Consensus 226 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 226 IYCGKHDVQCPYIFSCEIANLIPN--ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp EEEETTCSSSCHHHHHHHHHHSTT--EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred EEEeccCCCCCHHHHHHHHhhCCC--cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 9999999988 566778888877 99999999999999999999999999985
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=248.75 Aligned_cols=273 Identities=12% Similarity=0.117 Sum_probs=171.7
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
.+..++..+|.+++|...| ++|+|||+||++++... |...+..+..+||+||++|+||||.|+.+.......
T Consensus 11 ~~~~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~ 82 (328)
T 2cjp_A 11 IEHKMVAVNGLNMHLAELG--EGPTILFIHGFPELWYS------WRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSK 82 (328)
T ss_dssp CEEEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGG
T ss_pred hheeEecCCCcEEEEEEcC--CCCEEEEECCCCCchHH------HHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCccc
Confidence 3556778899999999998 57899999999988754 545555555679999999999999997531012245
Q ss_pred CCHHHHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC----ChhHHhhhhhh-hHHH
Q 018916 100 LSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP----SWTEWLYNKVM-SNLL 172 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~-~~~~ 172 (349)
++++++++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++++.... ........... ....
T Consensus 83 ~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T 2cjp_A 83 FSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYI 162 (328)
T ss_dssp GSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHH
Confidence 899999999999999999 9999999999999999999999999999999999764321 11111100000 0000
Q ss_pred HhcCcch----h----HHHHHHHhhcc---cc--------cccCC-------CCCCchHHHHHHHHhhhhccchhHHHHH
Q 018916 173 YYYGMCG----V----VKELLLKRYFS---KQ--------EVRGN-------AQVPESDIVQACRRLLDERQSSNVWHFL 226 (349)
Q Consensus 173 ~~~~~~~----~----~~~~~~~~~~~---~~--------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (349)
....... . ........++. .. .+... ......+..+.+...+...........+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T 2cjp_A 163 SRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYY 242 (328)
T ss_dssp HHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHH
T ss_pred HhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHH
Confidence 0000000 0 00112222221 00 00000 0000112222222222111111111111
Q ss_pred HHhcCCCCh--hhhccccCCceEEEEeCCCccchh--------HHHHHHHhcccce-eEEEEcCCCCcccccChhhHHHH
Q 018916 227 EAINGRPDI--SEGLRKLQCRSLIFVGESSPFHSE--------AVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIP 295 (349)
Q Consensus 227 ~~~~~~~~~--~~~l~~i~~Pvlii~g~~D~~~~~--------~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~ 295 (349)
.......+. ...+.++++|+++|+|++|.+++. .+.+.+.+++ . ++++++++||++++|+|+++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~i~~~gH~~~~e~p~~~~~~ 320 (328)
T 2cjp_A 243 RALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPL--LEEVVVLEGAAHFVSQERPHEISKH 320 (328)
T ss_dssp HTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTT--BCCCEEETTCCSCHHHHSHHHHHHH
T ss_pred HhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcC--CeeEEEcCCCCCCcchhCHHHHHHH
Confidence 100000000 013578899999999999998832 1356667776 7 89999999999999999999999
Q ss_pred HHHHHhh
Q 018916 296 MEYFLMG 302 (349)
Q Consensus 296 i~~fl~~ 302 (349)
|.+||++
T Consensus 321 i~~fl~~ 327 (328)
T 2cjp_A 321 IYDFIQK 327 (328)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999975
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=239.30 Aligned_cols=244 Identities=14% Similarity=0.155 Sum_probs=165.9
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+..++..+|.+++|...|+ +.++|||+||+++++.. .|...+..+.++||+|+++|+||||.|..+. ..+
T Consensus 3 ~~~~~~~~g~~l~~~~~g~-~~~~vvllHG~~~~~~~-----~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~ 72 (254)
T 2ocg_A 3 TSAKVAVNGVQLHYQQTGE-GDHAVLLLPGMLGSGET-----DFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD----RDF 72 (254)
T ss_dssp EEEEEEETTEEEEEEEEEC-CSEEEEEECCTTCCHHH-----HCHHHHHHSCTTTEEEEEECCTTSTTCCSSC----CCC
T ss_pred ceeEEEECCEEEEEEEecC-CCCeEEEECCCCCCCcc-----chHHHHHHHhhCCCeEEEECCCCCCCCCCCC----CCC
Confidence 4567788999999999984 34589999999877322 1444555565668999999999999987431 234
Q ss_pred C---HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 101 S---VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 101 ~---~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
+ +++.++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++............ ... .. ....
T Consensus 73 ~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~-~~--~~~~ 148 (254)
T 2ocg_A 73 PADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIY-EGI-RD--VSKW 148 (254)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHH-HTT-SC--GGGS
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHH-HHH-HH--HHHH
Confidence 5 788899999999999999999999999999999999999999999999998654321110000 000 00 0000
Q ss_pred chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc---CCCChhhhccccCCceEEEEeCCC
Q 018916 178 CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN---GRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
.......+ ...+.. ........ .+......+. ......+.+.++++|+|+|+|++|
T Consensus 149 ~~~~~~~~-~~~~~~-----------~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 207 (254)
T 2ocg_A 149 SERTRKPL-EALYGY-----------DYFARTCE---------KWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKD 207 (254)
T ss_dssp CHHHHHHH-HHHHCH-----------HHHHHHHH---------HHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTC
T ss_pred HHHhHHHH-HHHhcc-----------hhhHHHHH---------HHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCC
Confidence 00010000 011111 00000000 0000111110 111234567889999999999999
Q ss_pred ccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 255 PFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
.++ ...+.+.+.+++ .++++++++||+++.|+|+++++.|.+||+
T Consensus 208 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 208 PLVPRFHADFIHKHVKG--SRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp SSSCHHHHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred ccCCHHHHHHHHHhCCC--CEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 988 456678888887 899999999999999999999999999984
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=246.85 Aligned_cols=268 Identities=11% Similarity=0.068 Sum_probs=182.9
Q ss_pred CCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
+..+..++.+++.+++|...| ++|+|||+||++++... |...+..++.+||+|+++|+||||.|..+ .
T Consensus 7 ~~~~~~~~~~~g~~l~~~~~g--~~~~vv~~HG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~S~~~----~ 74 (309)
T 3u1t_A 7 FPFAKRTVEVEGATIAYVDEG--SGQPVLFLHGNPTSSYL------WRNIIPYVVAAGYRAVAPDLIGMGDSAKP----D 74 (309)
T ss_dssp CCCCCEEEEETTEEEEEEEEE--CSSEEEEECCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCCC----S
T ss_pred ccccceEEEECCeEEEEEEcC--CCCEEEEECCCcchhhh------HHHHHHHHHhCCCEEEEEccCCCCCCCCC----C
Confidence 345778899999999999999 48899999999988755 44555566889999999999999998743 2
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC----ChhHHhhhhhhhHHHH
Q 018916 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP----SWTEWLYNKVMSNLLY 173 (349)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~~~~ 173 (349)
..++++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..... .+..+.. .....+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~ 152 (309)
T 3u1t_A 75 IEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGP--QLGPLFR 152 (309)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHH--HHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccch--hhhHHHH
Confidence 268999999999999999999999999999999999999999999999999999876543 1111110 0000000
Q ss_pred hcCcchhHH------HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCC----------CChh
Q 018916 174 YYGMCGVVK------ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGR----------PDIS 236 (349)
Q Consensus 174 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~ 236 (349)
......... ......++...... .....+..+.+...+... ............... .+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
T 3u1t_A 153 DLRTADVGEKMVLDGNFFVETILPEMGVV---RSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNG 229 (309)
T ss_dssp HHTSTTHHHHHHTTTCHHHHTHHHHTSCS---SCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHH
T ss_pred HHhccchhhhhccccceehhhhccccccc---ccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhh
Confidence 000000000 00111111110000 011333333333322211 111111111111100 1233
Q ss_pred hhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 237 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 237 ~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
..+.++++|+|+|+|++|.++ ...+.+.+.+++ .++++++++||+++.++|+++++.|.+||+++.
T Consensus 230 ~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 230 EWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPN--LEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNK 297 (309)
T ss_dssp HHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred hhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCC--CEEEEecCCcccchhhCHHHHHHHHHHHHHhcc
Confidence 457789999999999999998 556678888887 888888999999999999999999999999875
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=242.20 Aligned_cols=265 Identities=13% Similarity=0.133 Sum_probs=178.4
Q ss_pred CCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
+...+.+++.++|.+++|...| ++|+|||+||++++... |...+ ..+.+.|+|+++|+||||.|..+
T Consensus 7 ~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~~-~~L~~~~~vi~~D~~G~G~S~~~---- 73 (301)
T 3kda_A 7 PNGFESAYREVDGVKLHYVKGG--QGPLVMLVHGFGQTWYE------WHQLM-PELAKRFTVIAPDLPGLGQSEPP---- 73 (301)
T ss_dssp CTTCEEEEEEETTEEEEEEEEE--SSSEEEEECCTTCCGGG------GTTTH-HHHTTTSEEEEECCTTSTTCCCC----
T ss_pred ccccceEEEeeCCeEEEEEEcC--CCCEEEEECCCCcchhH------HHHHH-HHHHhcCeEEEEcCCCCCCCCCC----
Confidence 4455778899999999999999 78899999999988755 43443 44444599999999999999753
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCc-EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH------------Hh
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE------------WL 163 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~------------~~ 163 (349)
...++++++++++.+++++++.++ ++++||||||.+|+.+|.++|++|+++|++++......... +.
T Consensus 74 ~~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (301)
T 3kda_A 74 KTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWH 153 (301)
T ss_dssp SSCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTH
T ss_pred CCCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhh
Confidence 346899999999999999999988 99999999999999999999999999999999754321110 00
Q ss_pred ----hh-hhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhc----CCC
Q 018916 164 ----YN-KVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAIN----GRP 233 (349)
Q Consensus 164 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~ 233 (349)
.. ......+.. .......+.+...+..... ...++..+.+...+.... .......+..+. ...
T Consensus 154 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (301)
T 3kda_A 154 FSFFAADDRLAETLIA-GKERFFLEHFIKSHASNTE------VFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNA 226 (301)
T ss_dssp HHHHHCSTTHHHHHHT-TCHHHHHHHHHHHTCSSGG------GSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHhhcCcchHHHHhc-cchHHHHHHHHHhccCCcc------cCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcc
Confidence 00 001111111 1111111112222221101 113344444433332211 111111111110 001
Q ss_pred ChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 234 DISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 234 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.....+.++++|+++|+|++|...+....+.+.+++ +++++++++||++++|+|+++++.|.+|+++.
T Consensus 227 ~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 227 ELAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAED--VEGHVLPGCGHWLPEECAAPMNRLVIDFLSRG 294 (301)
T ss_dssp HHTTSCBCSCEEEEEECSTTSCTTHHHHHHHTTBSS--EEEEEETTCCSCHHHHTHHHHHHHHHHHHTTS
T ss_pred cchhhccccCcceEEEecCCCCChhHHHHHHhhccc--CeEEEcCCCCcCchhhCHHHHHHHHHHHHhhC
Confidence 112234589999999999999332666777777877 99999999999999999999999999999875
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=241.31 Aligned_cols=251 Identities=12% Similarity=0.094 Sum_probs=177.5
Q ss_pred eEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
+++|...|+ ++|+|||+||++.+... |...+ ..+.+||+|+++|+||||.|..+.......++++++++++.
T Consensus 10 ~l~~~~~g~-~~p~vv~~HG~~~~~~~------~~~~~-~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~ 81 (269)
T 4dnp_A 10 ALNVRVVGS-GERVLVLAHGFGTDQSA------WNRIL-PFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLL 81 (269)
T ss_dssp HTTCEEECS-CSSEEEEECCTTCCGGG------GTTTG-GGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHH
T ss_pred HhhhhhcCC-CCCEEEEEeCCCCcHHH------HHHHH-HHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHH
Confidence 466777774 56899999999988755 33333 44555999999999999998642112234459999999999
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh------hhhhhHHHHhcCcchhHHHH
Q 018916 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY------NKVMSNLLYYYGMCGVVKEL 184 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 184 (349)
++++.++.++++++||||||.+|+.+|.++|++|+++|++++.........+.. .......+. ....... ..
T Consensus 82 ~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~ 159 (269)
T 4dnp_A 82 HILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAME-ANYEAWV-NG 159 (269)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHH-HCHHHHH-HH
T ss_pred HHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhcc-ccHHHHH-HH
Confidence 999999999999999999999999999999999999999998765322111100 000001100 1111111 11
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHH
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 262 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~ 262 (349)
+....+.. ...+..+.+...+..............+.. .+..+.+.++++|+++++|++|.++ ...+.
T Consensus 160 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 229 (269)
T 4dnp_A 160 FAPLAVGA---------DVPAAVREFSRTLFNMRPDITLFVSRTVFN-SDMRGVLGLVKVPCHIFQTARDHSVPASVATY 229 (269)
T ss_dssp HHHHHHCS---------SCHHHHHHHHHHHHHSCHHHHHHHHHHHHT-CCCGGGGGGCCSCEEEEEEESBTTBCHHHHHH
T ss_pred hhhhhccC---------CChhHHHHHHHHHHccCcchhhhHhhhhcc-hhhHhhhccccCCEEEEecCCCcccCHHHHHH
Confidence 11112221 134455555555554455555555555544 5677888999999999999999998 56666
Q ss_pred HHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 263 MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+.+.+++ .+++++++++||+++.++|+++++.|.+||++
T Consensus 230 ~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 230 LKNHLGG-KNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp HHHHSSS-CEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred HHHhCCC-CceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 8888876 37999999999999999999999999999975
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=240.71 Aligned_cols=265 Identities=12% Similarity=0.109 Sum_probs=167.8
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+..++..+|.+++|...|++.+|+|||+||++.++.. |... ...+.++|+|+++|+||||.|+.+ ....+
T Consensus 22 ~~~~~~~~g~~l~y~~~G~g~~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~via~Dl~GhG~S~~~---~~~~~ 91 (318)
T 2psd_A 22 RCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYL------WRHV-VPHIEPVARCIIPDLIGMGKSGKS---GNGSY 91 (318)
T ss_dssp HCEEEEETTEEEEEEECCSCTTSEEEEECCTTCCGGG------GTTT-GGGTTTTSEEEEECCTTSTTCCCC---TTSCC
T ss_pred cceEEeeCCeEEEEEEcCCCCCCeEEEECCCCCcHHH------HHHH-HHHhhhcCeEEEEeCCCCCCCCCC---CCCcc
Confidence 4467888999999999997666799999999988755 4333 355667789999999999999753 22348
Q ss_pred CHHHHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC-ChhHHhhhhhhhHHHHhcCcc
Q 018916 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP-SWTEWLYNKVMSNLLYYYGMC 178 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 178 (349)
+++++++++.++++++++ ++++|+||||||.+|+.+|.++|++|+++|++++..... ....+.........+......
T Consensus 92 ~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (318)
T 2psd_A 92 RLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGE 171 (318)
T ss_dssp SHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccch
Confidence 999999999999999999 999999999999999999999999999999988542211 000000000000000000000
Q ss_pred hhH--HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc--chhHHHHHHHhcCC-----------CChhhhcccc-
Q 018916 179 GVV--KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ--SSNVWHFLEAINGR-----------PDISEGLRKL- 242 (349)
Q Consensus 179 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~l~~i- 242 (349)
... ...+...++.. .... ...++..+.+...+.... .............. .+..+.+.++
T Consensus 172 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 247 (318)
T 2psd_A 172 KMVLENNFFVETVLPS-KIMR---KLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASD 247 (318)
T ss_dssp HHHTTTCHHHHTHHHH-TCSS---CCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCT
T ss_pred hhhhcchHHHHhhccc-cccc---cCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhcccc
Confidence 000 00000111100 0000 012222333322221110 00000000000000 0122345677
Q ss_pred CCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 243 QCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++|+|+|+|++| ++ ...+.+.+.+++ .+++++ ++||++++|+|+++++.|.+||++.
T Consensus 248 ~~P~Lvi~G~~D-~~~~~~~~~~~~~~~--~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 248 DLPKLFIESDPG-FFSNAIVEGAKKFPN--TEFVKV-KGLHFLQEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp TSCEEEEEEEEC-SSHHHHHHHHTTSSS--EEEEEE-EESSSGGGTCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccc-cCcHHHHHHHHhCCC--cEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHh
Confidence 999999999999 77 445567777776 888888 7899999999999999999999875
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-33 Score=237.89 Aligned_cols=270 Identities=17% Similarity=0.150 Sum_probs=175.1
Q ss_pred CCCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 16 PPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 16 ~~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
.....+..++.++|.+++|...| ++|+|||+||++++... |... ...+.+||+|+++|+||||.|+.+...
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~~~v~~~D~~G~G~S~~~~~~ 79 (306)
T 3r40_A 9 LFPGFGSEWINTSSGRIFARVGG--DGPPLLLLHGFPQTHVM------WHRV-APKLAERFKVIVADLPGYGWSDMPESD 79 (306)
T ss_dssp CSTTCEEEEECCTTCCEEEEEEE--CSSEEEEECCTTCCGGG------GGGT-HHHHHTTSEEEEECCTTSTTSCCCCCC
T ss_pred hccCCceEEEEeCCEEEEEEEcC--CCCeEEEECCCCCCHHH------HHHH-HHHhccCCeEEEeCCCCCCCCCCCCCC
Confidence 33456788899999999999999 77899999999988755 4333 345556999999999999998753211
Q ss_pred -CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh---hhh----
Q 018916 96 -DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY---NKV---- 167 (349)
Q Consensus 96 -~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~---- 167 (349)
....++++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|++++............ ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T 3r40_A 80 EQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWS 159 (306)
T ss_dssp TTCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHH
Confidence 012589999999999999999999999999999999999999999999999999998553221111000 000
Q ss_pred -------hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhh-ccchhHHHHHHHhcCCCChh---
Q 018916 168 -------MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDIS--- 236 (349)
Q Consensus 168 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--- 236 (349)
....+......... +.....+... . ......++..+.+...+.. .........+..... .+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 233 (306)
T 3r40_A 160 FLAQPAPLPENLLGGDPDFYV-KAKLASWTRA-G---DLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAY-ADFEHDK 233 (306)
T ss_dssp HHTSCTTHHHHHHTSCHHHHH-HHHHHHTSSS-S---SSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHT-HHHHHHH
T ss_pred HhhcccchHHHHHcCCHHHHH-HHHhhcccCC-C---ccccCCHHHHHHHHHHHccCCCcchhhHHHHhccc-ccchhhh
Confidence 00000000000111 1111111111 0 0112244555555444332 111111222222111 1111
Q ss_pred ---hhccccCCceEEEEeCCCccch---hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 237 ---EGLRKLQCRSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 237 ---~~l~~i~~Pvlii~g~~D~~~~---~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
..+.++++|+++|+|++|.+++ ....+.+..++ .+++++ ++||+++.|+|+++++.|.+||++.
T Consensus 234 ~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 234 IDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASD--VQGAPI-ESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSS--EEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred hhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCC--CeEEEe-cCCcCchhhChHHHHHHHHHHHHhc
Confidence 1468899999999999999873 23445555665 888888 7999999999999999999999875
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=241.02 Aligned_cols=260 Identities=15% Similarity=0.137 Sum_probs=163.5
Q ss_pred eEEeCCCeeEEEEEccCCC-CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~-~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
.++..+|.+++|...|+++ +++|||+||++.+... |... ...+.++|+|+++|+||||.|+.+ .....++
T Consensus 9 ~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~Dl~G~G~S~~~--~~~~~~~ 79 (285)
T 3bwx_A 9 YWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARD------FEDL-ATRLAGDWRVLCPEMRGRGDSDYA--KDPMTYQ 79 (285)
T ss_dssp EEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGGG------GHHH-HHHHBBTBCEEEECCTTBTTSCCC--SSGGGCS
T ss_pred eeecCCCceEEEEEcCCCCCCCcEEEECCCCcchhh------HHHH-HHHhhcCCEEEeecCCCCCCCCCC--CCccccC
Confidence 3445578899999999654 7899999999988755 4333 455666999999999999998743 1123589
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcC-cchh
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG-MCGV 180 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 180 (349)
++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... ... .......... ....
T Consensus 80 ~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~ 155 (285)
T 3bwx_A 80 PMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPE-GLE---RIRGYVGQGRNFETW 155 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHH-HHH---HHHHHTTCCCEESSH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcc-hhH---HHHHHhcCCcccccH
Confidence 9999999999999999999999999999999999999999999999999865433211 100 0000000000 0000
Q ss_pred H-HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccc--------hhHHHHHHHh---cCCCChhhhcccc-CCceE
Q 018916 181 V-KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQS--------SNVWHFLEAI---NGRPDISEGLRKL-QCRSL 247 (349)
Q Consensus 181 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~l~~i-~~Pvl 247 (349)
. ........+.. .+.. .............+..... ......+... ....+....+.++ ++|+|
T Consensus 156 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 231 (285)
T 3bwx_A 156 MHAARALQESSGD-VYPD---WDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLL 231 (285)
T ss_dssp HHHHHHHHHHHTT-TSTT---CCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEE
T ss_pred HHHHHHHHHhhhh-cccc---cChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeE
Confidence 0 00011111111 1100 0011111111111110000 0000000000 0011222334555 79999
Q ss_pred EEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|+|++|.++ ...+.+.+. ++ +++++++++||++++|+|+.+ +.|.+||+++
T Consensus 232 ii~G~~D~~~~~~~~~~~~~~-~~--~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~~ 285 (285)
T 3bwx_A 232 VLRGETSDILSAQTAAKMASR-PG--VELVTLPRIGHAPTLDEPESI-AAIGRLLERV 285 (285)
T ss_dssp EEEETTCSSSCHHHHHHHHTS-TT--EEEEEETTCCSCCCSCSHHHH-HHHHHHHTTC
T ss_pred EEEeCCCCccCHHHHHHHHhC-CC--cEEEEeCCCCccchhhCchHH-HHHHHHHHhC
Confidence 9999999988 455567666 65 999999999999999999987 5799999753
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=229.40 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=172.5
Q ss_pred eeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
..++..+|.+++|...| ++|+|||+||++++... |... ...+.+||+|+++|+||||.|..+ ..++
T Consensus 5 ~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~~~vi~~d~~G~G~S~~~-----~~~~ 70 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG--SGPPVVLVGGALSTRAG------GAPL-AERLAPHFTVICYDRRGRGDSGDT-----PPYA 70 (262)
T ss_dssp CEEECTTSCEEEEEEEE--CSSEEEEECCTTCCGGG------GHHH-HHHHTTTSEEEEECCTTSTTCCCC-----SSCC
T ss_pred heEEcCCCcEEEEEEcC--CCCcEEEECCCCcChHH------HHHH-HHHHhcCcEEEEEecCCCcCCCCC-----CCCC
Confidence 45666789999999999 57899999999988755 4333 345559999999999999998743 2589
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH---HhhhhhhhHHHHhcCcc
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKVMSNLLYYYGMC 178 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 178 (349)
++++++++.+++++++ ++++++|||+||.+++.+|.++| +|+++|++++......... ......+...+......
T Consensus 71 ~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (262)
T 3r0v_A 71 VEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRG 148 (262)
T ss_dssp HHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchh
Confidence 9999999999999999 99999999999999999999999 9999999998876532211 00001111111111111
Q ss_pred hhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhh----ccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 179 GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE----RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
... ..+....... .++..+.+...... .................+..+.+.++++|+++|+|++|
T Consensus 149 ~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 217 (262)
T 3r0v_A 149 DAV-TYFMTEGVGV----------PPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGAS 217 (262)
T ss_dssp HHH-HHHHHHTSCC----------CHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTC
T ss_pred hHH-HHHhhcccCC----------CHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCC
Confidence 111 1111111111 33333433321100 01111111222222334456778899999999999999
Q ss_pred ccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 255 PFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
.++ +..+.+.+.+++ +++++++++|| +++|+++++.|.+||++
T Consensus 218 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 218 PAWIRHTAQELADTIPN--ARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp CHHHHHHHHHHHHHSTT--EEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHhCCC--CeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 998 566778888887 89999999999 47899999999999964
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=234.16 Aligned_cols=256 Identities=11% Similarity=0.085 Sum_probs=176.9
Q ss_pred CCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
.++.+++|...| ++|+|||+||++++...|.. ..+..++++||+|+++|+||||.|..+ ..+++++++
T Consensus 30 ~~~~~l~y~~~g--~~~~vv~lHG~~~~~~~~~~-----~~~~~l~~~g~~vi~~D~~G~G~s~~~-----~~~~~~~~~ 97 (293)
T 3hss_A 30 FRVINLAYDDNG--TGDPVVFIAGRGGAGRTWHP-----HQVPAFLAAGYRCITFDNRGIGATENA-----EGFTTQTMV 97 (293)
T ss_dssp SCEEEEEEEEEC--SSEEEEEECCTTCCGGGGTT-----TTHHHHHHTTEEEEEECCTTSGGGTTC-----CSCCHHHHH
T ss_pred cccceEEEEEcC--CCCEEEEECCCCCchhhcch-----hhhhhHhhcCCeEEEEccCCCCCCCCc-----ccCCHHHHH
Confidence 356689999988 77899999999988766321 234566789999999999999987632 248999999
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHH-HH
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE-LL 185 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 185 (349)
+++.++++.++.++++++|||+||.+|+.+|.++|++|+++|++++............................... ..
T Consensus 98 ~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (293)
T 3hss_A 98 ADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARAR 177 (293)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999998766533322211111111001111111100 00
Q ss_pred HHhhcccccccCCCCCCchHHHHHHHHhhhhc---cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhH
Q 018916 186 LKRYFSKQEVRGNAQVPESDIVQACRRLLDER---QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEA 260 (349)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~ 260 (349)
....+...... ............... ....+.... ......+....+.++++|+++++|++|.++ ...
T Consensus 178 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~ 250 (293)
T 3hss_A 178 LLENFSRKTLN------DDVAVGDWIAMFSMWPIKSTPGLRCQL-DCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLG 250 (293)
T ss_dssp HHHHSCHHHHT------CHHHHHHHHHHHHHSCCCCCHHHHHHH-TSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred Hhhhccccccc------ccccHHHHHHHHhhccccccHHHHhHh-hhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHH
Confidence 01111110110 122222222222211 111222222 222335566778899999999999999998 556
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+.+.+++ +++++++++||+++.++|+++++.|.+||+++
T Consensus 251 ~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 251 REVADALPN--GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp HHHHHHSTT--EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCC--ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 778888887 99999999999999999999999999999875
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=232.90 Aligned_cols=234 Identities=11% Similarity=0.076 Sum_probs=149.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (349)
+++++|||+||++.++.. |..++..+.++||+||++|+||||.|+.+ ....++++++++|+.+++++++ .
T Consensus 8 ~~g~~vvllHG~~~~~~~------w~~~~~~L~~~g~~via~Dl~G~G~S~~~---~~~~~~~~~~a~dl~~~l~~l~~~ 78 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWI------WYKLKPLLESAGHKVTAVDLSAAGINPRR---LDEIHTFRDYSEPLMEVMASIPPD 78 (264)
T ss_dssp -CCCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTCSCC---GGGCCSHHHHHHHHHHHHHHSCTT
T ss_pred CCCCeEEEECCCccccch------HHHHHHHHHhCCCEEEEeecCCCCCCCCC---cccccCHHHHHHHHHHHHHHhCCC
Confidence 478899999999887744 54554555567999999999999998642 1234799999999999999997 5
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC--hhHHhhhhhhhHHHHhcCc-----------------ch
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGM-----------------CG 179 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----------------~~ 179 (349)
++++|+||||||.+++.+|.++|++|+++|++++...... ..... ..+......... ..
T Consensus 79 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 2wfl_A 79 EKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPF--EKYNEKCPADMMLDSQFSTYGNPENPGMSMI 156 (264)
T ss_dssp CCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHH--HHHHHHSCTTTTTTCEEEEESCTTSCEEEEE
T ss_pred CCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHH--HHhhhcCcchhhhhhhhhhccCCCCCcchhh
Confidence 8999999999999999999999999999999997532211 11100 000000000000 00
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 257 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-- 257 (349)
...+.....++.. ...+... +......... .... .+........ ....++|+|+|+|++|.++
T Consensus 157 ~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~-~~~~---~~~~~~~~~~-~~~~~~P~l~i~G~~D~~~~~ 221 (264)
T 2wfl_A 157 LGPQFMALKMFQN---------CSVEDLE-LAKMLTRPGS-LFFQ---DLAKAKKFST-ERYGSVKRAYIFCNEDKSFPV 221 (264)
T ss_dssp CCHHHHHHHTSTT---------SCHHHHH-HHHHHCCCEE-CCHH---HHTTSCCCCT-TTGGGSCEEEEEETTCSSSCH
T ss_pred hhHHHHHHHHhcC---------CCHHHHH-HHHhccCCCc-cccc---ccccccccCh-HHhCCCCeEEEEeCCcCCCCH
Confidence 0000000001100 0111111 1111110000 0000 0111011110 1113689999999999998
Q ss_pred hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 258 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
...+.+.+.+++ .++++++++||++++|+|+++++.|.+|++
T Consensus 222 ~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 222 EFQKWFVESVGA--DKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC--ceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 456668888887 899999999999999999999999999985
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=230.72 Aligned_cols=241 Identities=16% Similarity=0.157 Sum_probs=154.0
Q ss_pred EccCCCC--CeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018916 36 IYGDQDK--PALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (349)
Q Consensus 36 ~~g~~~~--p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~ 112 (349)
.+|+++. |+|||+||+++++.. |...+ ..+. ++|+|+++|+||||.|... ..++++++++++.++
T Consensus 8 ~~g~~~~~~~~vvllHG~~~~~~~------w~~~~-~~L~~~~~~vi~~Dl~GhG~S~~~-----~~~~~~~~a~~l~~~ 75 (264)
T 1r3d_A 8 HFAKPTARTPLVVLVHGLLGSGAD------WQPVL-SHLARTQCAALTLDLPGHGTNPER-----HCDNFAEAVEMIEQT 75 (264)
T ss_dssp ESSCCBTTBCEEEEECCTTCCGGG------GHHHH-HHHTTSSCEEEEECCTTCSSCC------------CHHHHHHHHH
T ss_pred ccCCCCCCCCcEEEEcCCCCCHHH------HHHHH-HHhcccCceEEEecCCCCCCCCCC-----CccCHHHHHHHHHHH
Confidence 4565443 899999999988855 54443 4455 8999999999999998742 136889999999999
Q ss_pred HHHcCCCc--EEEEEechhHHHHHH---HHHhhhcccceeEEecCCCCCCChhHHhhhhh----hhHHHHhcCcchhHHH
Q 018916 113 LNHFGLGA--VMCMGVTAGAYILTL---FAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV----MSNLLYYYGMCGVVKE 183 (349)
Q Consensus 113 l~~l~~~~--v~lvGhS~Gg~ia~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 183 (349)
+++++.++ ++|+||||||.+|+. +|.++|++|+++|++++............... ....+.... . .
T Consensus 76 l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~ 150 (264)
T 1r3d_A 76 VQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQP----I-E 150 (264)
T ss_dssp HHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSC----H-H
T ss_pred HHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhcccc----H-H
Confidence 99999877 999999999999999 88899999999999998655433221111000 000000000 1 1
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh--cCCCChhhhccccCCceEEEEeCCCccchhHH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAV 261 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 261 (349)
.....++.. .... ...++..+.+...............+... ....+..+.+.++++|+++|+|++|..+.
T Consensus 151 ~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--- 223 (264)
T 1r3d_A 151 HVLSDWYQQ-AVFS---SLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ--- 223 (264)
T ss_dssp HHHHHHTTS-GGGT---TCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH---
T ss_pred HHHHHHhhh-hhhh---ccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH---
Confidence 122222222 1111 01222223322222211222222222221 11235566788999999999999998642
Q ss_pred HHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 262 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+.+. .++++++++||++++|+|+++++.|.+|++++
T Consensus 224 ~~~~~~~---~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 224 QLAESSG---LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HHHHHHC---SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHhC---CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 3334443 67999999999999999999999999999864
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=232.89 Aligned_cols=237 Identities=11% Similarity=0.031 Sum_probs=151.2
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (349)
++++|||+||++.++.. |..++..+.++||+||++|+||||.|+.+ ....++++++++++.++++.++ .+
T Consensus 3 ~~~~vvllHG~~~~~~~------w~~~~~~L~~~g~rVia~Dl~G~G~S~~~---~~~~~~~~~~a~dl~~~l~~l~~~~ 73 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWS------WYKLKPLLEAAGHKVTALDLAASGTDLRK---IEELRTLYDYTLPLMELMESLSADE 73 (273)
T ss_dssp CCCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEECCCTTSTTCCCC---GGGCCSHHHHHHHHHHHHHTSCSSS
T ss_pred CCCeEEEECCCCCCcch------HHHHHHHHHhCCCEEEEecCCCCCCCccC---cccccCHHHHHHHHHHHHHHhccCC
Confidence 46899999999877644 54554455467999999999999998642 1234799999999999999997 58
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC--hhHHhhhhhhhHHHHhcCcc----------------hhH
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMC----------------GVV 181 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----------------~~~ 181 (349)
+++|+||||||.+++.+|.++|++|+++|++++...... ..... ..+........+. ...
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVL--EQYNERTPAENWLDTQFLPYGSPEEPLTSMFF 151 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHH--HHHHHTSCTTTTTTCEEEECSCTTSCCEEEEC
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHH--HHhhccCChhhHHHHHHhhccCCCCCcccccc
Confidence 999999999999999999999999999999997542211 11100 0000000000000 000
Q ss_pred HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hh
Q 018916 182 KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 259 (349)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~ 259 (349)
........+.. . ...+... +.......... ....+... .... .....++|+++|+|++|.++ ..
T Consensus 152 ~~~~~~~~~~~-~-------~~~~~~~-~~~~~~~~~~~-~~~~~~~~---~~~~-~~~~~~~P~l~i~G~~D~~~p~~~ 217 (273)
T 1xkl_A 152 GPKFLAHKLYQ-L-------CSPEDLA-LASSLVRPSSL-FMEDLSKA---KYFT-DERFGSVKRVYIVCTEDKGIPEEF 217 (273)
T ss_dssp CHHHHHHHTST-T-------SCHHHHH-HHHHHCCCBCC-CHHHHHHC---CCCC-TTTGGGSCEEEEEETTCTTTTHHH
T ss_pred CHHHHHHHhhc-c-------CCHHHHH-HHHHhcCCCch-hhhhhhcc---cccc-hhhhCCCCeEEEEeCCccCCCHHH
Confidence 00000100000 0 0111111 11111100000 00111110 1111 01124689999999999988 45
Q ss_pred HHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 260 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+.+.+.+++ .++++++++||++++|+|+++++.|.+|+++..
T Consensus 218 ~~~~~~~~p~--~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 218 QRWQIDNIGV--TEAIEIKGADHMAMLCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp HHHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCCC--CeEEEeCCCCCCchhcCHHHHHHHHHHHHHHhc
Confidence 5668888887 899999999999999999999999999998764
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=237.58 Aligned_cols=247 Identities=13% Similarity=0.104 Sum_probs=157.8
Q ss_pred eEEEEEccCCCCC-eEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018916 31 SLSVTIYGDQDKP-ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (349)
Q Consensus 31 ~l~~~~~g~~~~p-~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l 109 (349)
+++|...| ++| +|||+||++.++.. |... ...+.++|+|+++|+||||.|..+ ..++++++++++
T Consensus 3 ~l~~~~~G--~g~~~vvllHG~~~~~~~------w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l 68 (258)
T 1m33_A 3 NIWWQTKG--QGNVHLVLLHGWGLNAEV------WRCI-DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAV 68 (258)
T ss_dssp CCCEEEEC--CCSSEEEEECCTTCCGGG------GGGT-HHHHHTTSEEEEECCTTSTTCCSC-----CCCCHHHHHHHH
T ss_pred ceEEEEec--CCCCeEEEECCCCCChHH------HHHH-HHHhhcCcEEEEeeCCCCCCCCCC-----CCcCHHHHHHHH
Confidence 56788888 467 99999999988755 4343 355677999999999999998743 257899888766
Q ss_pred HHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh-hhhhhhHHHHhcCcchhHHHHHHHh
Q 018916 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL-YNKVMSNLLYYYGMCGVVKELLLKR 188 (349)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (349)
.+ .++ ++++|+||||||.+|+.+|.++|++|+++|++++.+.......+. ........+.. .+.... ......
T Consensus 69 ~~---~l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~ 142 (258)
T 1m33_A 69 LQ---QAP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQ-QLSDDQ-QRTVER 142 (258)
T ss_dssp HT---TSC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHH-HHHHHH-HHHHHH
T ss_pred HH---HhC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHH-HHhccH-HHHHHH
Confidence 44 455 899999999999999999999999999999999764322111110 00000000000 000000 011112
Q ss_pred hcccccccCCCCCCchHHHHHHHHhhhhccc---hhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHH
Q 018916 189 YFSKQEVRGNAQVPESDIVQACRRLLDERQS---SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 263 (349)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~ 263 (349)
++.. ..... .......+.+...+..... ..+......+.. .+..+.+.++++|+++|+|++|.++ ...+.+
T Consensus 143 ~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~ 218 (258)
T 1m33_A 143 FLAL-QTMGT--ETARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML 218 (258)
T ss_dssp HHHT-TSTTS--TTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-C
T ss_pred HHHH-HhcCC--ccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHh-CCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHH
Confidence 2211 00000 0012222233322221111 122222222222 3455678889999999999999988 345556
Q ss_pred HHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 264 TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 264 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+++ .++++++++||++++|+|+++++.|.+||++.
T Consensus 219 ~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 219 DKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp TTTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred HHhCcc--ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 666776 89999999999999999999999999999875
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=238.12 Aligned_cols=255 Identities=14% Similarity=0.150 Sum_probs=171.0
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCCH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 102 (349)
+++++|.+++|...| ++|+|||+||++++... |...+..+.. +||+|+++|+||||.|..+. . +++
T Consensus 5 ~~~~~g~~l~y~~~g--~~~~vv~lhG~~~~~~~------~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~----~-~~~ 71 (272)
T 3fsg_A 5 KEYLTRSNISYFSIG--SGTPIIFLHGLSLDKQS------TCLFFEPLSNVGQYQRIYLDLPGMGNSDPIS----P-STS 71 (272)
T ss_dssp CCEECTTCCEEEEEC--CSSEEEEECCTTCCHHH------HHHHHTTSTTSTTSEEEEECCTTSTTCCCCS----S-CSH
T ss_pred EEEecCCeEEEEEcC--CCCeEEEEeCCCCcHHH------HHHHHHHHhccCceEEEEecCCCCCCCCCCC----C-CCH
Confidence 456789999999998 67899999999988765 3333344444 59999999999999987432 2 899
Q ss_pred HHHHHHHHHHHHH-cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh-hHHHHhcCcchh
Q 018916 103 DDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM-SNLLYYYGMCGV 180 (349)
Q Consensus 103 ~~~~~~l~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 180 (349)
+++++++.+++++ ++.++++++||||||.+|+.+|.++|++|+++|++++................ ........+...
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T 3fsg_A 72 DNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKE 151 (272)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGG
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHH
Confidence 9999999999998 88899999999999999999999999999999999987643211100000000 000000000000
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCC--CChh--hhccccCCceEEEEeCCCcc
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR--PDIS--EGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~l~~i~~Pvlii~g~~D~~ 256 (349)
....+....... .+.....+..................+... .+.. ..+.++++|+++|+|++|.+
T Consensus 152 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 221 (272)
T 3fsg_A 152 YFADFLSMNVII----------NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQV 221 (272)
T ss_dssp GHHHHHHHCSEE----------SHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTT
T ss_pred HHHHHHHHhccC----------CCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCc
Confidence 011111111111 222222222222111111111111111111 1121 24578899999999999999
Q ss_pred c--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 257 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+ +..+.+.+.+++ +++++++++||+++.++|+++++.|.+||+++
T Consensus 222 ~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 222 VGYQEQLKLINHNEN--GEIVLLNRTGHNLMIDQREAVGFHFDLFLDEL 268 (272)
T ss_dssp TCSHHHHHHHTTCTT--EEEEEESSCCSSHHHHTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCC--CeEEEecCCCCCchhcCHHHHHHHHHHHHHHh
Confidence 8 566778888877 99999999999999999999999999999875
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-33 Score=232.57 Aligned_cols=235 Identities=9% Similarity=0.058 Sum_probs=150.2
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (349)
++++|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ....++++++++++.+++++++ .+
T Consensus 2 ~~~~vvllHG~~~~~~~------w~~~~~~L~~~g~~via~Dl~G~G~S~~~---~~~~~~~~~~a~dl~~~l~~l~~~~ 72 (257)
T 3c6x_A 2 AFAHFVLIHTICHGAWI------WHKLKPLLEALGHKVTALDLAASGVDPRQ---IEEIGSFDEYSEPLLTFLEALPPGE 72 (257)
T ss_dssp CCCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTCSCC---GGGCCSHHHHTHHHHHHHHTSCTTC
T ss_pred CCCcEEEEcCCccCcCC------HHHHHHHHHhCCCEEEEeCCCCCCCCCCC---cccccCHHHHHHHHHHHHHhccccC
Confidence 35789999999977754 54554455467999999999999998642 1234899999999999999996 58
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC--hhHHhhhhhhhHHHHh-cC-c-------------chhHH
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYY-YG-M-------------CGVVK 182 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~-~~-~-------------~~~~~ 182 (349)
+++|+||||||.+++.+|.++|++|+++|++++...... ..... ......... .. . .....
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVV--DKLMEVFPDWKDTTYFTYTKDGKEITGLKLGF 150 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHH--HHHHHHSCCCTTCEEEEEEETTEEEEEEECCH
T ss_pred CeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHH--HHHhhcCcchhhhhhhhccCCCCccccccccH
Confidence 999999999999999999999999999999998642211 11100 000000000 00 0 00000
Q ss_pred HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhH
Q 018916 183 ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEA 260 (349)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~ 260 (349)
+.....++.. ...+..... ......... ....+..... . ....+ .++|+|+|+|++|.++ ...
T Consensus 151 ~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~-~-~~~~~--~~~P~l~i~G~~D~~~p~~~~ 215 (257)
T 3c6x_A 151 TLLRENLYTL---------CGPEEYELA-KMLTRKGSL-FQNILAKRPF-F-TKEGY--GSIKKIYVWTDQDEIFLPEFQ 215 (257)
T ss_dssp HHHHHHTSTT---------SCHHHHHHH-HHHCCCBCC-CHHHHHHSCC-C-CTTTG--GGSCEEEEECTTCSSSCHHHH
T ss_pred HHHHHHHhcC---------CCHHHHHHH-HHhcCCCcc-chhhhccccc-c-Chhhc--CcccEEEEEeCCCcccCHHHH
Confidence 0000111110 011111111 111100000 0111111111 0 01111 2689999999999998 456
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+.+.+++ .++++++++||++++|+|+++++.|.+|+++.
T Consensus 216 ~~~~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 216 LWQIENYKP--DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHHHHSCC--SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCC--CeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 668888887 89999999999999999999999999999864
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=238.05 Aligned_cols=264 Identities=15% Similarity=0.153 Sum_probs=180.6
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
.+++++++++++++|...+ +++|+|||+||++++... |...+..++.+||+|+++|+||||.|..+. .....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~ 74 (279)
T 4g9e_A 3 INYHELETSHGRIAVRESE-GEGAPLLMIHGNSSSGAI------FAPQLEGEIGKKWRVIAPDLPGHGKSTDAI-DPDRS 74 (279)
T ss_dssp CEEEEEEETTEEEEEEECC-CCEEEEEEECCTTCCGGG------GHHHHHSHHHHHEEEEEECCTTSTTSCCCS-CHHHH
T ss_pred eEEEEEEcCCceEEEEecC-CCCCeEEEECCCCCchhH------HHHHHhHHHhcCCeEEeecCCCCCCCCCCC-CcccC
Confidence 4678899999999999887 467899999999988755 445555667889999999999999987431 12235
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh-hHHHHhcCcc
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM-SNLLYYYGMC 178 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 178 (349)
++++++++++.++++.++.++++++||||||.+|+.+|.++|+ +.++++++++............... ..........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 4g9e_A 75 YSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFS 153 (279)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCccccc
Confidence 7999999999999999999999999999999999999999999 8999999887665432221100000 0000011111
Q ss_pred hhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-
Q 018916 179 GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 257 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~- 257 (349)
......+...++.. . ......+.+..... .........+... ...+....+.++++|+|+|+|++|.++
T Consensus 154 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 223 (279)
T 4g9e_A 154 ERDVESYARSTCGE-P-------FEASLLDIVARTDG-RARRIMFEKFGSG-TGGNQRDIVAEAQLPIAVVNGRDEPFVE 223 (279)
T ss_dssp HHHHHHHHHHHHCS-S-------CCHHHHHHHHHSCH-HHHHHHHHHHHHT-CBCCHHHHHHHCCSCEEEEEETTCSSBC
T ss_pred HHHHHHHHHhhccC-c-------ccHHHHHHHHhhhc-cchHHHHHHhhcc-CCchHHHHHHhcCCCEEEEEcCCCcccc
Confidence 11112222323322 1 12222222221110 1111122222222 224666778899999999999999998
Q ss_pred -hhHHHHH-HHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 258 -SEAVHMT-SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 258 -~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
...+.+. +.+++ +++++++++||+++.++|+++++.|.+||++..
T Consensus 224 ~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 270 (279)
T 4g9e_A 224 LDFVSKVKFGNLWE--GKTHVIDNAGHAPFREAPAEFDAYLARFIRDCT 270 (279)
T ss_dssp HHHHTTCCCSSBGG--GSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhhccCCC--CeEEEECCCCcchHHhCHHHHHHHHHHHHHHhh
Confidence 3333444 45555 899999999999999999999999999999864
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=233.23 Aligned_cols=266 Identities=11% Similarity=0.077 Sum_probs=175.9
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+..++..++.+++|...| ++|+|||+||++++... |... ...+.++|+|+++|+||||.|..+.......+
T Consensus 9 ~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 79 (297)
T 2qvb_A 9 QPKYLEIAGKRMAYIDEG--KGDAIVFQHGNPTSSYL------WRNI-MPHLEGLGRLVACDLIGMGASDKLSPSGPDRY 79 (297)
T ss_dssp CCEEEEETTEEEEEEEES--SSSEEEEECCTTCCGGG------GTTT-GGGGTTSSEEEEECCTTSTTSCCCSSCSTTSS
T ss_pred CceEEEECCEEEEEEecC--CCCeEEEECCCCchHHH------HHHH-HHHHhhcCeEEEEcCCCCCCCCCCCCccccCc
Confidence 456788899999999999 47999999999988755 3333 35556679999999999999875422122338
Q ss_pred CHHHHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh-hhhhhHHHHhcCcc
Q 018916 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYGMC 178 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 178 (349)
+++++++++.+++++++. ++++++||||||.+++.+|.++|++|+++|++++......+..... .......+......
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (297)
T 2qvb_A 80 SYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGE 159 (297)
T ss_dssp CHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHH
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccch
Confidence 999999999999999999 9999999999999999999999999999999998775322111000 00000000000000
Q ss_pred hhH--HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhh--ccchhHHHHHHHhcC----------CCChhhhccccCC
Q 018916 179 GVV--KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAING----------RPDISEGLRKLQC 244 (349)
Q Consensus 179 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~~l~~i~~ 244 (349)
... ...+...++.. .... ...++..+.+...+.. ............+.. ..+....+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 235 (297)
T 2qvb_A 160 PMALEHNIFVERVLPG-AILR---QLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 235 (297)
T ss_dssp HHHHTTCHHHHTHHHH-TCSS---CCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred hhhccccHHHHHHHhc-cccc---cCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccc
Confidence 000 00111111111 0000 1133334444333321 111222222222210 0133456778999
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|+|+|+|++|.++ +..+.+.+.+++ +++++ ++||+++.++|+++++.|.+||+++
T Consensus 236 P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 236 PKLFINAEPGAIITGRIRDYVRSWPNQ---TEITV-PGVHFVQEDSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHTSSSE---EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHcCC---eEEEe-cCccchhhhCHHHHHHHHHHHHHHH
Confidence 9999999999998 455566666664 88888 9999999999999999999999876
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=234.54 Aligned_cols=264 Identities=15% Similarity=0.161 Sum_probs=170.1
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-CCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEP 98 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~-~~~ 98 (349)
.+.+++++++.+++|...| ++++|||+||++.++.. |... ...+.++|+|+++|+||||.|+.+... ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~g--~g~~~vllHG~~~~~~~------w~~~-~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~ 75 (291)
T 3qyj_A 5 FEQTIVDTTEARINLVKAG--HGAPLLLLHGYPQTHVM------WHKI-APLLANNFTVVATDLRGYGDSSRPASVPHHI 75 (291)
T ss_dssp CEEEEEECSSCEEEEEEEC--CSSEEEEECCTTCCGGG------GTTT-HHHHTTTSEEEEECCTTSTTSCCCCCCGGGG
T ss_pred cceeEEecCCeEEEEEEcC--CCCeEEEECCCCCCHHH------HHHH-HHHHhCCCEEEEEcCCCCCCCCCCCCCcccc
Confidence 4677899999999999988 67899999999988755 4333 456778999999999999998754221 112
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH---Hhhhhh--------
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKV-------- 167 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~-------- 167 (349)
.++++.+++++.++++.++.++++++||||||.+|+.+|.++|++|++++++++.+....... ......
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3qyj_A 76 NYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQ 155 (291)
T ss_dssp GGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTC
T ss_pred ccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhcc
Confidence 489999999999999999999999999999999999999999999999999997542110000 000000
Q ss_pred ---hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcC---CCChhhhcc
Q 018916 168 ---MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING---RPDISEGLR 240 (349)
Q Consensus 168 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~l~ 240 (349)
....+.... .....+.....+... .. ...++..+.+.+.+... ........++.... ..+..+.+.
T Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T 3qyj_A 156 PDNLPETLIGAN-PEYYLRKCLEKWGKD--FS----AFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQ 228 (291)
T ss_dssp STTHHHHHHHTC-HHHHHHHHHHHHCSC--GG----GSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTC
T ss_pred CCCchHHHHcCC-HHHHHHHHHHhcCCC--cc----cCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCC
Confidence 000000000 000001111111111 00 11344444444433211 01111111222111 011123467
Q ss_pred ccCCceEEEEeCCCccch---hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 241 KLQCRSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~~---~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++++|+|+|+|++|.+.. ....+.+..++ .+...++ +||++++|+|+++++.|.+||+.
T Consensus 229 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 229 KISCPVLVLWGEKGIIGRKYDVLATWRERAID--VSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp CBCSCEEEEEETTSSHHHHSCHHHHHHTTBSS--EEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred ccccceEEEecccccccchhhHHHHHHhhcCC--cceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 899999999999997642 23334444444 7778885 99999999999999999999975
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=232.92 Aligned_cols=260 Identities=14% Similarity=0.133 Sum_probs=176.4
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
.+++++..+|.+++|..+|++++|+|||+||++++... |...+..+..+||+|+++|+||||.|..+. ....
T Consensus 4 ~~~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~ 75 (286)
T 3qit_A 4 MEEKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQGLA------WQEVALPLAAQGYRVVAPDLFGHGRSSHLE--MVTS 75 (286)
T ss_dssp CEEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCCS--SGGG
T ss_pred hhhheeecCCceEEEeecCCCCCCEEEEECCCCcccch------HHHHHHHhhhcCeEEEEECCCCCCCCCCCC--CCCC
Confidence 46788999999999999998889999999999988755 445556777789999999999999987432 2346
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHh---cC
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY---YG 176 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 176 (349)
++++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++...............+...+.. ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTP 155 (286)
T ss_dssp CSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCC
T ss_pred cCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhccc
Confidence 899999999999999999999999999999999999999999999999999998765433211111111111110 00
Q ss_pred ----cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccch---------hHHHHHHHhc----CCCChhhhc
Q 018916 177 ----MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSS---------NVWHFLEAIN----GRPDISEGL 239 (349)
Q Consensus 177 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~l 239 (349)
................ ....+....+.......... .......... ...+..+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T 3qit_A 156 QHPIFPDVATAASRLRQAIP--------SLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML 227 (286)
T ss_dssp CCCCBSSHHHHHHHHHHHST--------TSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHH
T ss_pred cccccccHHHHHHHhhcCCc--------ccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHH
Confidence 0011100000000000 01222333322222110000 0000000000 012234556
Q ss_pred cccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHH
Q 018916 240 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEY 298 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 298 (349)
.++++|+++|+|++|.++ +..+.+.+.+++ ++++++++ ||++++++|+++++.|.+
T Consensus 228 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 228 KSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ--AKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHCCSCEEEEEETTCCSSCHHHHHHHHHHSTT--SEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred hccCCCeEEEEeCCCcccCHHHHHHHHHHCCC--CeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 788999999999999998 566678888887 89999998 999999999999998864
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-32 Score=231.97 Aligned_cols=261 Identities=18% Similarity=0.199 Sum_probs=175.7
Q ss_pred cCCCCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCC
Q 018916 14 ETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAA 92 (349)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~ 92 (349)
...+...+..++++++++++|...|++++|+|||+||++++... |...+ ..+.+||+|+++|+||| |.|..+
T Consensus 39 ~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~------~~~~~-~~L~~g~~vi~~D~~G~gG~s~~~ 111 (306)
T 2r11_A 39 SLWPVRCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTM------WYPNI-ADWSSKYRTYAVDIIGDKNKSIPE 111 (306)
T ss_dssp TTCCSCCEEEEECCTTEEEEEEEESCTTSCEEEEECCTTTCGGG------GTTTH-HHHHHHSEEEEECCTTSSSSCEEC
T ss_pred HhCCCCcceEEEecCCceEEEEeeCCCCCCeEEEECCCCCCHHH------HHHHH-HHHhcCCEEEEecCCCCCCCCCCC
Confidence 34455567888999999999999998788999999999988755 43333 34455999999999999 887642
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
...++++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...............
T Consensus 112 ----~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----- 182 (306)
T 2r11_A 112 ----NVSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYA----- 182 (306)
T ss_dssp ----SCCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHH-----
T ss_pred ----CCCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHH-----
Confidence 23589999999999999999999999999999999999999999999999999999876532211111000
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHH---HHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEE
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQA---CRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 249 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 249 (349)
.. .........+...+... .. . ....... ....+.. ....+....... ........+.++++|+|+|
T Consensus 183 ~~-~~~~~~~~~~~~~~~~~-~~-----~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii 252 (306)
T 2r11_A 183 LG-LTASNGVETFLNWMMND-QN-----V-LHPIFVKQFKAGVMWQD-GSRNPNPNADGF-PYVFTDEELRSARVPILLL 252 (306)
T ss_dssp HT-TTSTTHHHHHHHHHTTT-CC-----C-SCHHHHHHHHHHHHCCS-SSCCCCCCTTSS-SCBCCHHHHHTCCSCEEEE
T ss_pred hH-HHHHHHHHHHHHHhhCC-cc-----c-cccccccccHHHHHHHH-hhhhhhhhccCC-CCCCCHHHHhcCCCCEEEE
Confidence 00 00011112222222221 10 0 1111111 1111100 000000000000 0013345678899999999
Q ss_pred EeCCCccc--hhHHHHH-HHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 250 VGESSPFH--SEAVHMT-SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 250 ~g~~D~~~--~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+|++|.++ ....++. +.+++ +++++++++||+++.++|+++++.|.+||++
T Consensus 253 ~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 253 LGEHEVIYDPHSALHRASSFVPD--IEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp EETTCCSSCHHHHHHHHHHHSTT--CEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred EeCCCcccCHHHHHHHHHHHCCC--CEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 99999998 3444344 45666 9999999999999999999999999999964
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=240.48 Aligned_cols=227 Identities=10% Similarity=0.082 Sum_probs=155.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc--CC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--GL 118 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l--~~ 118 (349)
+++.|||+||++++... |...+..+.++||+|+++|+||||.|..+ ...++++++++|+.++++.+ +.
T Consensus 50 ~~~~VlllHG~~~s~~~------~~~la~~La~~Gy~Via~Dl~GhG~S~~~----~~~~~~~~~~~d~~~~~~~l~~~~ 119 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQS------MRFLAEGFARAGYTVATPRLTGHGTTPAE----MAASTASDWTADIVAAMRWLEERC 119 (281)
T ss_dssp SSEEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEECCCTTSSSCHHH----HHTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEECCCCCCCCCcc----ccCCCHHHHHHHHHHHHHHHHhCC
Confidence 45679999999888754 44555677788999999999999998532 23478999999999999876 56
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
++++|+||||||.+|+.+|.++|++|+++|++++............... . ...... . .+.. .....
T Consensus 120 ~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~-----~~~~~~-----~-~~~~-~~~~~ 185 (281)
T 4fbl_A 120 DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFN--P-----DAPAEL-----P-GIGS-DIKAE 185 (281)
T ss_dssp SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTC--T-----TCCSEE-----E-CCCC-CCSST
T ss_pred CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHh--H-----hhHHhh-----h-cchh-hhhhH
Confidence 8999999999999999999999999999999999876654322111000 0 000000 0 0000 00000
Q ss_pred CCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEE
Q 018916 199 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 276 (349)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~ 276 (349)
.. .. . ................. ......+.+|++|+|+|+|++|.++ +.++.+.+.+++.++++++
T Consensus 186 ~~--~~-----~--~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~ 253 (281)
T 4fbl_A 186 GV--KE-----L--AYPVTPVPAIKHLITIG---AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLW 253 (281)
T ss_dssp TC--CC-----C--CCSEEEGGGHHHHHHHH---HHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEE
T ss_pred HH--HH-----h--hhccCchHHHHHHHHhh---hhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEE
Confidence 00 00 0 00000011111111111 1123457889999999999999998 5677788999876789999
Q ss_pred EcCCCCccccc-ChhhHHHHHHHHHhhc
Q 018916 277 VQACGSMVTEE-QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 277 i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 303 (349)
++++||+++.+ +++++.+.|.+||+++
T Consensus 254 ~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 254 LENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp ESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred ECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 99999999887 5899999999999874
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=231.07 Aligned_cols=256 Identities=17% Similarity=0.152 Sum_probs=177.2
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+...+.+++..++|...|+ +|+|||+||++++... |... ...+.++|+|+++|+||||.|.. ....+
T Consensus 49 ~~~~~~~~~~~~~~~~~g~--~p~vv~lhG~~~~~~~------~~~~-~~~L~~~~~v~~~D~~G~G~S~~----~~~~~ 115 (314)
T 3kxp_A 49 ISRRVDIGRITLNVREKGS--GPLMLFFHGITSNSAV------FEPL-MIRLSDRFTTIAVDQRGHGLSDK----PETGY 115 (314)
T ss_dssp EEEEEECSSCEEEEEEECC--SSEEEEECCTTCCGGG------GHHH-HHTTTTTSEEEEECCTTSTTSCC----CSSCC
T ss_pred ceeeEEECCEEEEEEecCC--CCEEEEECCCCCCHHH------HHHH-HHHHHcCCeEEEEeCCCcCCCCC----CCCCC
Confidence 6778888999999999984 8899999999888754 4333 35566689999999999999872 23458
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++.................... .....
T Consensus 116 ~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 192 (314)
T 3kxp_A 116 EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGS--QLFED- 192 (314)
T ss_dssp SHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTC--SCBSS-
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhch--hhhcC-
Confidence 999999999999999999999999999999999999999999999999999887554322111111000000 00000
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc--------cchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER--------QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
. ..... ++.. ... ....+............ .............. .+..+.+.++++|+|+++|+
T Consensus 193 ~-~~~~~-~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~Lii~G~ 264 (314)
T 3kxp_A 193 I-KAVEA-YLAG-RYP----NIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLR-SDLVPAYRDVTKPVLIVRGE 264 (314)
T ss_dssp H-HHHHH-HHHH-HST----TSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTT-SCCHHHHHHCCSCEEEEEET
T ss_pred H-HHHHH-HHHh-hcc----cCchHHHHHHhhhhhcccccccccccChhhhhhhccccC-cchhhHhhcCCCCEEEEecC
Confidence 0 00111 1110 000 00222222222211100 00111111222222 36667788999999999999
Q ss_pred CCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 253 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+|.++ +..+.+.+.+++ +++++++++||+++.++|+++++.|.+||++
T Consensus 265 ~D~~~~~~~~~~~~~~~~~--~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 265 SSKLVSAAALAKTSRLRPD--LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp TCSSSCHHHHHHHHHHCTT--SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99988 566778888887 9999999999999999999999999999974
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=225.88 Aligned_cols=233 Identities=11% Similarity=0.092 Sum_probs=153.1
Q ss_pred CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018916 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (349)
Q Consensus 29 ~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 108 (349)
+..++|. + ++|+|||+||++++... |...+..+.++||+|+++|+||||.|.. ....+++++++++
T Consensus 7 ~~~~~~~--~--~~~~vvllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~GhG~s~~----~~~~~~~~~~~~d 72 (247)
T 1tqh_A 7 PKPFFFE--A--GERAVLLLHGFTGNSAD------VRMLGRFLESKGYTCHAPIYKGHGVPPE----ELVHTGPDDWWQD 72 (247)
T ss_dssp CCCEEEC--C--SSCEEEEECCTTCCTHH------HHHHHHHHHHTTCEEEECCCTTSSSCHH----HHTTCCHHHHHHH
T ss_pred CCCeeeC--C--CCcEEEEECCCCCChHH------HHHHHHHHHHCCCEEEecccCCCCCCHH----HhcCCCHHHHHHH
Confidence 3345554 3 46899999999988755 4344445556799999999999997642 1123688888777
Q ss_pred HHH---HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHH
Q 018916 109 IAE---VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185 (349)
Q Consensus 109 l~~---~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (349)
+.+ ++++++.++++|+||||||.+|+.+|.++| |+++|+++++.......... ...... .. .+
T Consensus 73 ~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~--~~~~~~---------~~-~~ 138 (247)
T 1tqh_A 73 VMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMY--EGVLEY---------AR-EY 138 (247)
T ss_dssp HHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHH--HHHHHH---------HH-HH
T ss_pred HHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhh--HHHHHH---------HH-Hh
Confidence 654 667788899999999999999999999998 99999887655432221111 000000 00 00
Q ss_pred HHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHH
Q 018916 186 LKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 263 (349)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~ 263 (349)
.. .... .++........+.......... +..+. .+..+.+.++++|+|+|+|++|.++ +..+.+
T Consensus 139 ~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~ 204 (247)
T 1tqh_A 139 KK-REGK----------SEEQIEQEMEKFKQTPMKTLKA-LQELI--ADVRDHLDLIYAPTFVVQARHDEMINPDSANII 204 (247)
T ss_dssp HH-HHTC----------CHHHHHHHHHHHTTSCCTTHHH-HHHHH--HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHH
T ss_pred hc-cccc----------chHHHHhhhhcccCCCHHHHHH-HHHHH--HHHHhhcccCCCCEEEEecCCCCCCCcchHHHH
Confidence 00 0000 1111111111111111111111 11111 1344567889999999999999998 567778
Q ss_pred HHHhcccceeEEEEcCCCCcccccC-hhhHHHHHHHHHhhc
Q 018916 264 TSKIDRRYSALVEVQACGSMVTEEQ-PHAMLIPMEYFLMGY 303 (349)
Q Consensus 264 ~~~~~~~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 303 (349)
.+.+++.++++++++++||+++.|+ |+++++.|.+||++.
T Consensus 205 ~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 205 YNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp HHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 8889865579999999999999975 799999999999875
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-32 Score=238.64 Aligned_cols=272 Identities=11% Similarity=0.071 Sum_probs=175.3
Q ss_pred ceeEEeCCCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+..++.++|.+++|...|++ ++|+|||+||++++... |...+..+..+||+|+++|+||||.|..+. ...
T Consensus 4 ~~~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~------~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~--~~~ 75 (356)
T 2e3j_A 4 VHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYS------WRHQIPALAGAGYRVVAIDQRGYGRSSKYR--VQK 75 (356)
T ss_dssp CEEEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCCCC--SGG
T ss_pred eEEEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHH------HHHHHHHHHHcCCEEEEEcCCCCCCCCCCC--ccc
Confidence 55678889999999999964 67899999999988754 444445565679999999999999987431 223
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC----------CCC---ChhHHhhh
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC----------KAP---SWTEWLYN 165 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~----------~~~---~~~~~~~~ 165 (349)
.++++++++++.++++.++.++++++||||||.+|+.+|.++|++|+++|++++.. ... ........
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (356)
T 2e3j_A 76 AYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLE 155 (356)
T ss_dssp GGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHS
T ss_pred ccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHH
Confidence 57999999999999999999999999999999999999999999999999999865 111 01111000
Q ss_pred h------hhhHHHHhcCc-----chhHHHHHHHhhccc---------------------------------------ccc
Q 018916 166 K------VMSNLLYYYGM-----CGVVKELLLKRYFSK---------------------------------------QEV 195 (349)
Q Consensus 166 ~------~~~~~~~~~~~-----~~~~~~~~~~~~~~~---------------------------------------~~~ 195 (349)
. .....+..... .... ...+..++.. ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (356)
T 2e3j_A 156 LAGPGRVWYQDYFAVQDGIITEIEEDL-RGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARL 234 (356)
T ss_dssp SSCSSEEEHHHHHHHCSHHHHHHHTTH-HHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCG
T ss_pred hhcCCcHHHHHHHhcccchHHHHHHhH-HHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhh
Confidence 0 00000000000 0000 0111111100 000
Q ss_pred cC-------CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhh--hccccCCceEEEEeCCCccch----hHHH
Q 018916 196 RG-------NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISE--GLRKLQCRSLIFVGESSPFHS----EAVH 262 (349)
Q Consensus 196 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~Pvlii~g~~D~~~~----~~~~ 262 (349)
.. .......+..+.+...+...........+.......+... .+.++++|+|+|+|++|.+++ ..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~ 314 (356)
T 2e3j_A 235 KDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIER 314 (356)
T ss_dssp GGGCCCCSSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHT
T ss_pred hhcccccccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHH
Confidence 00 0000122333333333322111111111111100000111 346899999999999999874 3455
Q ss_pred HHHHhcccce-eEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 263 MTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 263 ~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+.+++ . ++++++++||++++|+|+++++.|.+||+++
T Consensus 315 l~~~~p~--~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 315 AHEVMPN--YRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp HHHHCTT--EEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred HHHhCcC--cceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 7788887 8 9999999999999999999999999999875
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=228.87 Aligned_cols=260 Identities=12% Similarity=0.098 Sum_probs=164.2
Q ss_pred ceeEEeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+..++.+ +|.+++|...|++++++|||+||+++++..+ . | ..++ .++|+||++|+||||.|+.+ ....
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~~---~-~----~~~~~~~~~~vi~~D~~G~G~S~~~--~~~~ 84 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISP---H-H----RQLFDPERYKVLLFDQRGCGRSRPH--ASLD 84 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCG---G-G----GGGSCTTTEEEEEECCTTSTTCBST--TCCT
T ss_pred eeeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccch---h-h----hhhccccCCeEEEECCCCCCCCCCC--cccc
Confidence 4567777 6779999999977778999999987654211 1 1 1222 47999999999999999743 1223
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhh--------hhhhH
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN--------KVMSN 170 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--------~~~~~ 170 (349)
.++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.........+... .....
T Consensus 85 ~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 1wm1_A 85 NNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWER 164 (317)
T ss_dssp TCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999876543211111100 00000
Q ss_pred HHHhcCc--chhHHHHHHHhhcccccccCCCCCCchHHH----HHHHH---hhhhc--cc-------hhHHHHHH-----
Q 018916 171 LLYYYGM--CGVVKELLLKRYFSKQEVRGNAQVPESDIV----QACRR---LLDER--QS-------SNVWHFLE----- 227 (349)
Q Consensus 171 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~--~~-------~~~~~~~~----- 227 (349)
....... .......+...++.. ..... ..+.. ..... .. ..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (317)
T 1wm1_A 165 VLSILSDDERKDVIAAYRQRLTSA----------DPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENH 234 (317)
T ss_dssp HHTTSCTTGGGCHHHHHHHHHTCS----------CHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHH
T ss_pred HHhhccchhhcchHHHHHhhhcCC----------CccccccccccccccccchhhccCCcccccccccchhhhHHHhhhh
Confidence 0000000 000000111111111 11100 00000 00000 00 00000000
Q ss_pred -----HhcCCCC-hhhhccccC-CceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCccccc-ChhhHHHHHH
Q 018916 228 -----AINGRPD-ISEGLRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPME 297 (349)
Q Consensus 228 -----~~~~~~~-~~~~l~~i~-~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~ 297 (349)
.+....+ ..+.+.+++ +|+|+|+|++|.++ ...+.+.+.+++ +++++++++||+++.+ .++++.+.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~--~~~~~i~~~gH~~~~~~~~~~~~~~i~ 312 (317)
T 1wm1_A 235 YFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE--AELHIVEGAGHSYDEPGILHQLMIATD 312 (317)
T ss_dssp HHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT--SEEEEETTCCSSTTSHHHHHHHHHHHH
T ss_pred hhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCC--ceEEEECCCCCCCCCcchHHHHHHHHH
Confidence 0111122 345677785 99999999999998 456678888987 9999999999998764 5889999999
Q ss_pred HHHhh
Q 018916 298 YFLMG 302 (349)
Q Consensus 298 ~fl~~ 302 (349)
+|+.+
T Consensus 313 ~f~~~ 317 (317)
T 1wm1_A 313 RFAGK 317 (317)
T ss_dssp HHTC-
T ss_pred HHhcC
Confidence 99863
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-32 Score=228.93 Aligned_cols=252 Identities=14% Similarity=0.119 Sum_probs=177.2
Q ss_pred eEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
+++|...| +++|+|||+||++++... |... ...+.+||+|+++|+||||.|..+........+++++++++.
T Consensus 18 ~~~~~~~g-~~~~~vv~lHG~~~~~~~------~~~~-~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 89 (282)
T 3qvm_A 18 RNNINITG-GGEKTVLLAHGFGCDQNM------WRFM-LPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVE 89 (282)
T ss_dssp HTTCEEEE-CSSCEEEEECCTTCCGGG------GTTT-HHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHH
T ss_pred hcceeecC-CCCCeEEEECCCCCCcch------HHHH-HHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHH
Confidence 34566666 344899999999988754 4333 345556999999999999998754322223359999999999
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh-H------HhhhhhhhHHHHhcCcchhHHH
Q 018916 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-E------WLYNKVMSNLLYYYGMCGVVKE 183 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
++++.++.++++++||||||.+|+.+|.++|++|+++|++++........ . ..........+. ...... ..
T Consensus 90 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 167 (282)
T 3qvm_A 90 EILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMD-KNYIGW-AN 167 (282)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHH-HCHHHH-HH
T ss_pred HHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHh-cchhhH-HH
Confidence 99999999999999999999999999999999999999999876532111 0 000001111110 011111 11
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 261 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~ 261 (349)
.+....+.. ...+...+.+...+................. .+....+.++++|+++++|++|.++ +..+
T Consensus 168 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 238 (282)
T 3qvm_A 168 YLAPLVMGA--------SHSSELIGELSGSFCTTDPIVAKTFAKATFF-SDYRSLLEDISTPALIFQSAKDSLASPEVGQ 238 (282)
T ss_dssp HHHHHHHCT--------TSCHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CBCGGGGGGCCSCEEEEEEEECTTCCHHHHH
T ss_pred HHHhhccCC--------ccchhhHHHHHHHHhcCCcHHHHHHHHHHhc-ccHHHHHhcCCCCeEEEEeCCCCcCCHHHHH
Confidence 122222222 1244555555555544444444444444433 5666778899999999999999998 5667
Q ss_pred HHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 262 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+.+++ .++++++++||+++.++|+++++.|.+||++.
T Consensus 239 ~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 278 (282)
T 3qvm_A 239 YMAENIPN--SQLELIQAEGHCLHMTDAGLITPLLIHFIQNN 278 (282)
T ss_dssp HHHHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHHhCCC--CcEEEecCCCCcccccCHHHHHHHHHHHHHhc
Confidence 78888887 89999999999999999999999999999976
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-31 Score=226.49 Aligned_cols=270 Identities=14% Similarity=0.121 Sum_probs=175.6
Q ss_pred CCCCceeEEeCCCee--EEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 17 PPSGKDNLIKTSHGS--LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 17 ~~~~~~~~i~~~~~~--l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
++..+...+..++.. ++|...++ +++|+|||+||++++... |...+..+.++||+|+++|+||||.|..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 90 (315)
T 4f0j_A 17 AYPVHYLDFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGT------WERTIDVLADAGYRVIAVDQVGFCKSSKP 90 (315)
T ss_dssp SSCCEEEEEEETTEEEEEEEEEECCSSCCSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred CccceeEEEecCCCCeeEEEeecCCCCCCCCeEEEEcCCCCcchH------HHHHHHHHHHCCCeEEEeecCCCCCCCCC
Confidence 334455556666654 55665554 577899999999988754 44555666677999999999999998743
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
....++++++++++.++++.++.++++++|||+||.+|+.+|.++|++|+++|++++....................
T Consensus 91 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 167 (315)
T 4f0j_A 91 ---AHYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWY 167 (315)
T ss_dssp ---SSCCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHH
T ss_pred ---CccccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHH
Confidence 22368999999999999999999999999999999999999999999999999999865432111100000000000
Q ss_pred Hh-c-CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHH----HHHHhcCCCChhhhccccCCce
Q 018916 173 YY-Y-GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWH----FLEAINGRPDISEGLRKLQCRS 246 (349)
Q Consensus 173 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~i~~Pv 246 (349)
.. . .............++.. .... ....................... ....... .+....+.++++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~P~ 241 (315)
T 4f0j_A 168 RRDLQTSAEGIRQYQQATYYAG-EWRP----EFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFT-QPVVYELDRLQMPT 241 (315)
T ss_dssp HHHTTCCHHHHHHHHHHHTSTT-CCCG----GGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHH-CCCGGGGGGCCSCE
T ss_pred hhcccCChHHHHHHHHHHHhcc-ccCC----chHHHHHHHHHHhhccCcchhhHHHHHhcCcccc-chhhhhcccCCCCe
Confidence 00 0 11111111111112211 1110 02222222222222111111110 1111111 45667788999999
Q ss_pred EEEEeCCCccch------------------hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 247 LIFVGESSPFHS------------------EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 247 lii~g~~D~~~~------------------~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|+++|++|.+++ ..+.+.+.+++ +++++++++||+++.++|+++++.|.+||++.
T Consensus 242 lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 242 LLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQ--ATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp EEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTT--EEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred EEEEecCCCcCccccccccccccccccchhhhhHHHhhcCC--ceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 999999999873 23456677776 99999999999999999999999999999864
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=230.81 Aligned_cols=265 Identities=9% Similarity=0.060 Sum_probs=172.5
Q ss_pred eeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
..++..+|.+++|...| .+|+|||+||++++... |... ...+.++|+|+++|+||||.|..+.......++
T Consensus 11 ~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~------~~~~-~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 81 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEG--TGDPILFQHGNPTSSYL------WRNI-MPHCAGLGRLIACDLIGMGDSDKLDPSGPERYA 81 (302)
T ss_dssp CEEEEETTEEEEEEEES--CSSEEEEECCTTCCGGG------GTTT-GGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred ceEEEECCEEEEEEEcC--CCCEEEEECCCCCchhh------hHHH-HHHhccCCeEEEEcCCCCCCCCCCCCCCccccc
Confidence 45778899999999998 47999999999988755 3333 355566799999999999998754221223489
Q ss_pred HHHHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh-hhhhhHHHHhcCcch
Q 018916 102 VDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYGMCG 179 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 179 (349)
++++++++.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++............ .......+.... ..
T Consensus 82 ~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (302)
T 1mj5_A 82 YAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQA-GE 160 (302)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTT-HH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccc-hh
Confidence 99999999999999999 9999999999999999999999999999999998775322111000 000000000000 00
Q ss_pred hH---HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc--cchhHHHHHHHhc----------CCCChhhhccccCC
Q 018916 180 VV---KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER--QSSNVWHFLEAIN----------GRPDISEGLRKLQC 244 (349)
Q Consensus 180 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~l~~i~~ 244 (349)
.. ...+...++.. .... ....+....+...+... ...........+. ...+....+.++++
T Consensus 161 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 236 (302)
T 1mj5_A 161 ELVLQDNVFVEQVLPG-LILR---PLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236 (302)
T ss_dssp HHHTTTCHHHHTHHHH-TSSS---CCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCS
T ss_pred hhhcChHHHHHHHHHh-cCcc---cCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCC
Confidence 00 00111111111 0000 11333333333322211 1111111111110 00123456778999
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
|+|+|+|++|.++ ...+.+.+.+++ +++++ ++||+++.++|+++++.|.+|+++..
T Consensus 237 P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 237 PKLFINAEPGALTTGRMRDFCRTWPNQ---TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp CEEEEEEEECSSSSHHHHHHHTTCSSE---EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred CeEEEEeCCCCCCChHHHHHHHHhcCC---ceEEe-cCcCcccccCHHHHHHHHHHHHHhhc
Confidence 9999999999998 445556666653 88888 99999999999999999999998753
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-32 Score=226.56 Aligned_cols=237 Identities=11% Similarity=0.077 Sum_probs=158.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (349)
.+|+|||+||++++... |...+..+.++||+|+++|+||||.|+.+ ....++++++++++.+++++++. +
T Consensus 3 ~g~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~~l~~~l~~l~~~~ 73 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWI------WYKLKPLLESAGHRVTAVELAASGIDPRP---IQAVETVDEYSKPLIETLKSLPENE 73 (258)
T ss_dssp CCCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTCSSC---GGGCCSHHHHHHHHHHHHHTSCTTC
T ss_pred CCCcEEEECCCCCcccc------HHHHHHHHHhCCCEEEEecCCCCcCCCCC---CCccccHHHhHHHHHHHHHHhcccC
Confidence 35899999999988755 54555666677999999999999998743 12348999999999999999998 9
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH----HHHh-cC----------cchhHHHH
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN----LLYY-YG----------MCGVVKEL 184 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~~~-~~----------~~~~~~~~ 184 (349)
+++|+||||||.+++.+|.++|++|+++|++++.................. .+.. .. ........
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKF 153 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHH
Confidence 999999999999999999999999999999999765432211000000000 0000 00 00000111
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHH
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 262 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~ 262 (349)
+...++.. ...+.............. +...+. . .+........++|+++|+|++|.++ +..+.
T Consensus 154 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~---~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 218 (258)
T 3dqz_A 154 MKARLYQN---------CPIEDYELAKMLHRQGSF--FTEDLS---K-KEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRW 218 (258)
T ss_dssp HHHHTSTT---------SCHHHHHHHHHHCCCEEC--CHHHHH---T-SCCCCTTTGGGSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHhhcc---------CCHHHHHHHHHhccCCch--hhhhhh---c-cccccccccccCCEEEEECCCCeeeCHHHHHH
Confidence 11111111 022222222222211111 111111 1 1111222234799999999999998 56677
Q ss_pred HHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 263 MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+.+++ .++++++++||++++++|+++++.|.+|+++.
T Consensus 219 ~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 219 MIDNFNV--SKVYEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp HHHHSCC--SCEEEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred HHHhCCc--ccEEEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 8888887 89999999999999999999999999999874
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=224.82 Aligned_cols=240 Identities=8% Similarity=0.005 Sum_probs=157.7
Q ss_pred CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-
Q 018916 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG- 117 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~- 117 (349)
+.++|+|||+||++++... |...+..+.++||+|+++|+||||.|..+ ....++++++++++.+++++++
T Consensus 9 ~~~~~~vvllHG~~~~~~~------~~~~~~~l~~~g~~v~~~D~~G~G~S~~~---~~~~~~~~~~~~~~~~~l~~l~~ 79 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGAWC------WYKIVALMRSSGHNVTALDLGASGINPKQ---ALQIPNFSDYLSPLMEFMASLPA 79 (267)
T ss_dssp -CCCCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTCSCC---GGGCCSHHHHHHHHHHHHHTSCT
T ss_pred CCCCCeEEEECCCCCCcch------HHHHHHHHHhcCCeEEEeccccCCCCCCc---CCccCCHHHHHHHHHHHHHhcCC
Confidence 3578999999999988755 54555566667999999999999998743 2234899999999999999994
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh---hHHHHhcC------------cchhHH
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM---SNLLYYYG------------MCGVVK 182 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~~~------------~~~~~~ 182 (349)
.++++|+||||||.+++.+|.++|++|+++|++++................ ...+.... ......
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP 159 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH
T ss_pred CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH
Confidence 899999999999999999999999999999999997754432211100110 00000000 000001
Q ss_pred HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhH
Q 018916 183 ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEA 260 (349)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~ 260 (349)
+.....++.. ...+................... +..... .......++|+++|+|++|.++ +..
T Consensus 160 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~ 225 (267)
T 3sty_A 160 KFLATNVYHL---------SPIEDLALATALVRPLYLYLAED-ISKEVV----LSSKRYGSVKRVFIVATENDALKKEFL 225 (267)
T ss_dssp HHHHHHTSTT---------SCHHHHHHHHHHCCCEECCCHHH-HHHHCC----CCTTTGGGSCEEEEECCCSCHHHHHHH
T ss_pred HHHHHhhccc---------CCHHHHHHHHHhhccchhHHHHH-hhcchh----cccccccCCCEEEEEeCCCCccCHHHH
Confidence 1111111111 01222222222111111111011 111111 1111123699999999999998 566
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+.+.+++ +++++++++||++++++|+++++.|.+|++++
T Consensus 226 ~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 226 KLMIEKNPP--DEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHHSCC--SEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCC--ceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 778888887 99999999999999999999999999999875
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-30 Score=224.62 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=102.6
Q ss_pred ceeEEeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+..++.+ ++.+++|...|++++++|||+||+++++..+ . | ...+ .++|+||++|+||||.|+.+ ....
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~~---~-~----~~~~~~~~~~vi~~D~~G~G~S~~~--~~~~ 81 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCND---K-M----RRFHDPAKYRIVLFDQRGSGRSTPH--ADLV 81 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCG---G-G----GGGSCTTTEEEEEECCTTSTTSBST--TCCT
T ss_pred ccceEEcCCCCEEEEEecCCCCCCeEEEECCCCCccccH---H-H----HHhcCcCcceEEEECCCCCcCCCCC--cccc
Confidence 5667777 6779999999977778899999987654211 1 1 1233 47999999999999999743 1223
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
.++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...
T Consensus 82 ~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~ 138 (313)
T 1azw_A 82 DNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLL 138 (313)
T ss_dssp TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred cccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccC
Confidence 579999999999999999999999999999999999999999999999999988654
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=239.30 Aligned_cols=259 Identities=16% Similarity=0.137 Sum_probs=165.4
Q ss_pred eEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCH
Q 018916 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 102 (349)
....+++++++|..+|+ ++|+|||+||++.+... |...+..+ ||+|+++|+||||.|+.. ....+++
T Consensus 63 ~~~~~~~~~~~~~~~g~-~~~~vv~~hG~~~~~~~------~~~~~~~l---g~~Vi~~D~~G~G~S~~~---~~~~~~~ 129 (330)
T 3p2m_A 63 EVERVQAGAISALRWGG-SAPRVIFLHGGGQNAHT------WDTVIVGL---GEPALAVDLPGHGHSAWR---EDGNYSP 129 (330)
T ss_dssp CEEEEEETTEEEEEESS-SCCSEEEECCTTCCGGG------GHHHHHHS---CCCEEEECCTTSTTSCCC---SSCBCCH
T ss_pred CceeecCceEEEEEeCC-CCCeEEEECCCCCccch------HHHHHHHc---CCeEEEEcCCCCCCCCCC---CCCCCCH
Confidence 45556778899999984 47889999999988755 43333333 999999999999998742 2246899
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh--hhhHHHHhcCcchh
Q 018916 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--VMSNLLYYYGMCGV 180 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 180 (349)
+++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.............. .....+........
T Consensus 130 ~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (330)
T 3p2m_A 130 QLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPS 209 (330)
T ss_dssp HHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccC
Confidence 9999999999999999999999999999999999999999999999999864321100000000 00000000000000
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCC---ChhhhccccCCceEEEEeCCCccc
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP---DISEGLRKLQCRSLIFVGESSPFH 257 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~i~~Pvlii~g~~D~~~ 257 (349)
.. ............ .........+...........+......+.... +..+.+.++++|+|+|+|++|.++
T Consensus 210 ~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 283 (330)
T 3p2m_A 210 FQ-AMLDLTIAAAPH-----RDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFV 283 (330)
T ss_dssp HH-HHHHHHHHHCTT-----SCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSS
T ss_pred HH-HHHHHHHhcCCC-----CCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCC
Confidence 00 011111110000 001111111111110000000000000000001 112457789999999999999998
Q ss_pred --hhHHHHHHHhccccee-EEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 258 --SEAVHMTSKIDRRYSA-LVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 258 --~~~~~~~~~~~~~~~~-~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+..+.+.+.+++ .+ +++++++||+++.++|+++++.|.+||++
T Consensus 284 ~~~~~~~l~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 284 TDQDTAELHRRATH--FRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp CHHHHHHHHHHCSS--EEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCC--CeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 566778888887 88 99999999999999999999999999975
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=228.35 Aligned_cols=262 Identities=13% Similarity=0.115 Sum_probs=169.6
Q ss_pred eeEEeCCCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
..++..+|.+++|..+++. .+|+|||+||++.+... |...+..+..+||+|+++|+||||.|..+ ....
T Consensus 20 ~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~ 90 (303)
T 3pe6_A 20 PHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGR------YEELARMLMGLDLLVFAHDHVGHGQSEGE---RMVV 90 (303)
T ss_dssp CEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGG------GHHHHHHHHHTTEEEEEECCTTSTTSCSS---TTCC
T ss_pred CeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhH------HHHHHHHHHhCCCcEEEeCCCCCCCCCCC---CCCC
Confidence 3666778889999988764 35789999999988754 44555666677999999999999998743 2334
Q ss_pred CCHHHHHHHHHHHHHHcCC----CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 100 LSVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
++++++++|+.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...................+. .
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~ 169 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLN-S 169 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHH-T
T ss_pred CCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHH-H
Confidence 6888899999888877643 4899999999999999999999999999999999876543222111111111100 0
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
....... ..... ... .........+....... ................+..+.+.++++|+++++|++|
T Consensus 170 ~~~~~~~-----~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 239 (303)
T 3pe6_A 170 VLPNLSS-----GPIDS-SVL----SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSAD 239 (303)
T ss_dssp TCCSCCC-----CCCCG-GGT----CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTC
T ss_pred hcccccC-----Cccch-hhh----hcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCC
Confidence 0000000 00000 000 01222222222111110 0001111111111112344567889999999999999
Q ss_pred ccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHH---HHHHHhhc
Q 018916 255 PFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIP---MEYFLMGY 303 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~---i~~fl~~~ 303 (349)
.++ +..+.+.+.+++.+.++++++++||+++.++|+++.+. +.+||++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~ 293 (303)
T 3pe6_A 240 RLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 293 (303)
T ss_dssp SSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhcc
Confidence 998 56777888888545999999999999999999866655 55666654
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.98 E-value=5.5e-31 Score=232.63 Aligned_cols=275 Identities=12% Similarity=0.111 Sum_probs=171.3
Q ss_pred CCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhc-------ccccchhhh---hhhcCCeEEEEECCCC--CCCCCC
Q 018916 27 TSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ-------GLFFCPEAC---SLLLHNFCIYHINPPG--HEFGAA 91 (349)
Q Consensus 27 ~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~-------~~~~~~~~~---~~l~~g~~vi~~D~~G--~G~s~~ 91 (349)
.++.+++|...|++ ++|+|||+||++++...+.. ...|...+. .++.+||+|+++|+|| ||.|..
T Consensus 28 ~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~ 107 (366)
T 2pl5_A 28 LSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGP 107 (366)
T ss_dssp ESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSST
T ss_pred ccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCC
Confidence 45668999999964 37899999999988752100 002434332 3557899999999999 787763
Q ss_pred CCCCCC---------CCCCHHHHHHHHHHHHHHcCCCcE-EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH
Q 018916 92 AISDDE---------PVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 92 ~~~~~~---------~~~~~~~~~~~l~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (349)
...... ..++++++++++.+++++++.+++ +|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 187 (366)
T 2pl5_A 108 LSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI 187 (366)
T ss_dssp TSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH
T ss_pred CCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccc
Confidence 211111 147999999999999999999998 8999999999999999999999999999999876542211
Q ss_pred HhhhhhhhHHHHhc------Cc----chh-------------HHHHHHHhhcccccccCCCCCCchHHHHHHHHhh----
Q 018916 162 WLYNKVMSNLLYYY------GM----CGV-------------VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLL---- 214 (349)
Q Consensus 162 ~~~~~~~~~~~~~~------~~----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 214 (349)
... ......+... .+ ... ........++.. ..............+.+....
T Consensus 188 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (366)
T 2pl5_A 188 AFN-EVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGR-NPPRGNILSTDFAVGSYLIYQGESF 265 (366)
T ss_dssp HHH-HHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTT-SCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred hhh-HHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhh-hhhcccccchhhhHHHHHHHHHHhh
Confidence 110 0000000000 00 000 000011111211 110000000000000000000
Q ss_pred -hhccchhHHHHHHHhcCCC-----ChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEE-cCCCCc
Q 018916 215 -DERQSSNVWHFLEAINGRP-----DISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEV-QACGSM 283 (349)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i-~~~gH~ 283 (349)
.......+......+.... +..+.+.++++|+|+|+|++|.++ +..+.+.+.+++. +++++++ +++||+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 345 (366)
T 2pl5_A 266 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHD 345 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred hcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcc
Confidence 0011122222222222110 134467889999999999999998 5667788888832 3899999 899999
Q ss_pred ccccChhhHHHHHHHHHhhc
Q 018916 284 VTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 284 ~~~e~p~~~~~~i~~fl~~~ 303 (349)
++.|+|+++++.|.+||++.
T Consensus 346 ~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 346 SFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp GGGSCCHHHHHHHHHHHHCC
T ss_pred hhhcChhHHHHHHHHHHccC
Confidence 99999999999999999863
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-31 Score=235.66 Aligned_cols=270 Identities=12% Similarity=0.110 Sum_probs=168.6
Q ss_pred CeeEEEEEccCC---CCCeEEEecCCCCChhhh--h-----cccccchhh---hhhhcCCeEEEEECCCCCCCCC-----
Q 018916 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSC--F-----QGLFFCPEA---CSLLLHNFCIYHINPPGHEFGA----- 90 (349)
Q Consensus 29 ~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~--~-----~~~~~~~~~---~~~l~~g~~vi~~D~~G~G~s~----- 90 (349)
+.+|+|..+|+. .+|+|||+||+++++... + ..-+|...+ ..+..+||+|+++|+||||.|.
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g 105 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVI 105 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCC
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcc
Confidence 557899999853 358999999999886440 0 011254443 4666789999999999997743
Q ss_pred --CCCC---CC-------CCCCCHHHHHHHHHHHHHHcCCCcEE-EEEechhHHHHHHHHHhhhcccceeEE-ecCCCCC
Q 018916 91 --AAIS---DD-------EPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLIL-VSPLCKA 156 (349)
Q Consensus 91 --~~~~---~~-------~~~~~~~~~~~~l~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl-~~~~~~~ 156 (349)
.+.. .. ...++++++++++.+++++++.++++ |+||||||.+|+.+|.++|++|+++|+ +++....
T Consensus 106 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (377)
T 3i1i_A 106 TTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNP 185 (377)
T ss_dssp CCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCC
T ss_pred cCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcC
Confidence 1100 00 12579999999999999999999986 999999999999999999999999999 7766542
Q ss_pred CChhHHhhhhhhhHHHHhc------C----cc--------------hhHHHHHHHhhcccccccCCC---CCCchHHHHH
Q 018916 157 PSWTEWLYNKVMSNLLYYY------G----MC--------------GVVKELLLKRYFSKQEVRGNA---QVPESDIVQA 209 (349)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~------~----~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 209 (349)
........ ......+... . .. ..... .....+.. ...... ........+.
T Consensus 186 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 262 (377)
T 3i1i_A 186 IITSVNVA-QNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEH-FYETTYPR-NSIEVEPYEKVSSLTSFEK 262 (377)
T ss_dssp HHHHHHTT-HHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHH-HHHHHSCC-CSSCCGGGTCTTCCCHHHH
T ss_pred CchhhHHH-HHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHH-HHHHHhhh-hhccccccccccchhHHHH
Confidence 21111000 0000000000 0 00 00000 11111111 000000 0000111222
Q ss_pred HHHhh-----hhccchhHHHHHHHhcC------CCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHh----cccce
Q 018916 210 CRRLL-----DERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI----DRRYS 272 (349)
Q Consensus 210 ~~~~~-----~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~----~~~~~ 272 (349)
+.... .......+......+.. ..+..+.+.++++|+|+|+|++|.++ +..+.+.+.+ ++ +
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~--~ 340 (377)
T 3i1i_A 263 EINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKY--A 340 (377)
T ss_dssp HHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCC--E
T ss_pred HHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCC--c
Confidence 22111 11122222222222221 13446778899999999999999988 5677788888 65 9
Q ss_pred eEEEEcC-CCCcccccChhhHHHHHHHHHhhc
Q 018916 273 ALVEVQA-CGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 273 ~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++++++ +||++++|+|+++++.|.+||++.
T Consensus 341 ~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~ 372 (377)
T 3i1i_A 341 EVYEIESINGHMAGVFDIHLFEKKVYEFLNRK 372 (377)
T ss_dssp EECCBCCTTGGGHHHHCGGGTHHHHHHHHHSC
T ss_pred eEEEcCCCCCCcchhcCHHHHHHHHHHHHHhh
Confidence 9999998 999999999999999999999875
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-30 Score=235.74 Aligned_cols=259 Identities=12% Similarity=0.118 Sum_probs=178.5
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
++..+|..++|...| ++|+|||+||++++... |...+..+..+||+|+++|+||||.|+.+ ...++++
T Consensus 8 ~~~~dG~~l~y~~~G--~gp~VV~lHG~~~~~~~------~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~----~~~~s~~ 75 (456)
T 3vdx_A 8 QENSTSIDLYYEDHG--TGVPVVLIHGFPLSGHS------WERQSAALLDAGYRVITYDRRGFGQSSQP----TTGYDYD 75 (456)
T ss_dssp EETTEEEEEEEEEES--SSEEEEEECCTTCCGGG------GTTHHHHHHHHTEEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred ccccCCeEEEEEEeC--CCCEEEEECCCCCcHHH------HHHHHHHHHHCCcEEEEECCCCCCCCCCC----CCCCCHH
Confidence 445578899999998 77999999999988755 44555566688999999999999998743 2358999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCC--------h-hHHhhhhhhhHHHH
Q 018916 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS--------W-TEWLYNKVMSNLLY 173 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~--------~-~~~~~~~~~~~~~~ 173 (349)
++++|+.++++.++.++++++||||||.+++.+|+++ |++|+++|++++...... . ..... ..+...+.
T Consensus 76 ~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 154 (456)
T 3vdx_A 76 TFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFF-DGIVAAVK 154 (456)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHH-HHHHHhhh
Confidence 9999999999999999999999999999999999988 899999999998764311 0 00000 11111110
Q ss_pred hcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCC
Q 018916 174 YYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 253 (349)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 253 (349)
....... ..+...++....... .....+........................ ..+..+.+.++++|+|+|+|++
T Consensus 155 -~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~PvLiI~G~~ 228 (456)
T 3vdx_A 155 -ADRYAFY-TGFFNDFYNLDENLG--TRISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTG 228 (456)
T ss_dssp -HCHHHHH-HHHHHHHTTTTTSBT--TTBCHHHHHHHHHHHHTSCTTHHHHGGGGT--TCCCTTTSTTCCSCCEEEEETT
T ss_pred -ccchHHH-HHHHHHHhccccccc--ccccHHHHHHHhhhccccchhhhhhhhhhh--hhhHHHHhhhCCCCEEEEEeCC
Confidence 0111111 112222333211100 011333333333322222222222222222 3456677889999999999999
Q ss_pred Cccc--h-hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 254 SPFH--S-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 254 D~~~--~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|.++ . ..+.+.+.+++ +++++++++||+++.++|+++++.|.+||++.
T Consensus 229 D~~vp~~~~~~~l~~~~~~--~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 229 DRTLPIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp CSSSCGGGTHHHHHHHCTT--SEEEEETTCCSCTTTTTHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHCCC--ceEEEeCCCCCcchhhCHHHHHHHHHHHHHHh
Confidence 9998 3 45567777776 99999999999999999999999999999875
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.1e-30 Score=217.10 Aligned_cols=234 Identities=12% Similarity=0.126 Sum_probs=166.6
Q ss_pred CeeEEEEEccCC-CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 29 HGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 29 ~~~l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
|.+++|...|++ ++|+|||+||++++...|. . ...+.+||+|+++|+||||.|.. ...++++++++
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~-------~-~~~l~~g~~v~~~d~~g~g~s~~-----~~~~~~~~~~~ 68 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFG-------E-LEKYLEDYNCILLDLKGHGESKG-----QCPSTVYGYID 68 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGGGT-------T-GGGGCTTSEEEEECCTTSTTCCS-----CCCSSHHHHHH
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHHHH-------H-HHHHHhCCEEEEecCCCCCCCCC-----CCCcCHHHHHH
Confidence 567888888865 6899999999998876532 2 24455899999999999999862 23479999999
Q ss_pred HHHHHH------HHcCCCcEEEEEechhHHHHHHHHHh-hhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 108 QIAEVL------NHFGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 108 ~l~~~l------~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
++.+++ +.++ +++++|||+||.+++.+|.+ +|+ |+++|++++............ ..+........
T Consensus 69 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 140 (245)
T 3e0x_A 69 NVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFM-----EKIYHNQLDNN 140 (245)
T ss_dssp HHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHH-----HHHHTTCCCHH
T ss_pred HHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHH-----HHHHHHHHHhh
Confidence 999999 8887 99999999999999999999 999 999999999876632222111 11111111111
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
.. ...... ........+...+.. ....+...+..... .+..+.+.++++|+++++|++|.++ +
T Consensus 141 ~~----~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 205 (245)
T 3e0x_A 141 YL----LECIGG---------IDNPLSEKYFETLEK-DPDIMINDLIACKL-IDLVDNLKNIDIPVKAIVAKDELLTLVE 205 (245)
T ss_dssp HH----HHHHTC---------SCSHHHHHHHTTSCS-SHHHHHHHHHHHHH-CBCGGGGGGCCSCEEEEEETTCSSSCHH
T ss_pred cC----cccccc---------cchHHHHHHHHHHhc-CcHHHHHHHHHhcc-ccHHHHHHhCCCCEEEEEeCCCCCCCHH
Confidence 10 000000 022222222222221 22333333333332 4566778899999999999999998 5
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
..+.+.+.+++ +++++++++||+++.++|+++++.|.+||
T Consensus 206 ~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 206 YSEIIKKEVEN--SELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HHHHHHHHSSS--EEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC--ceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 66778888887 99999999999999999999999999885
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=222.57 Aligned_cols=233 Identities=13% Similarity=0.111 Sum_probs=162.8
Q ss_pred eEEeCCCeeEEEEEccCC----CCCeEEEecCCCCC--hhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALN--YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~----~~p~vv~lHG~~~~--~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
..+..+|.++++..+.+. .+|+|||+||++++ ... |...+..+.++||+|+++|+||||.|+.+
T Consensus 4 ~~~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---- 73 (251)
T 2wtm_A 4 MYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERH------IVAVQETLNEIGVATLRADMYGHGKSDGK---- 73 (251)
T ss_dssp EEEEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHH------HHHHHHHHHHTTCEEEEECCTTSTTSSSC----
T ss_pred eEEecCCcEEEEEEEccCCCCCCCCEEEEEcCCCccccccc------HHHHHHHHHHCCCEEEEecCCCCCCCCCc----
Confidence 456678889998887654 35789999999888 433 44444566678999999999999988732
Q ss_pred CCCCCHHHHHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 97 EPVLSVDDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
...++++++++|+.++++.+. .++++++||||||.+|+.+|.++|++|+++|+++|..... .... .. .+
T Consensus 74 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~---~~~~-~~---~~ 146 (251)
T 2wtm_A 74 FEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIP---EIAR-TG---EL 146 (251)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHH---HHHH-HT---EE
T ss_pred cccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhH---HHHh-hh---hh
Confidence 234789999999999998874 4689999999999999999999999999999999864311 0000 00 00
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
.+ ..+..... ... .. ..........+ ...... .+..+.+.++++|+|+|+|+
T Consensus 147 --~~-----------~~~~~~~~-------~~~-~~---~~~~~~~~~~~---~~~~~~-~~~~~~~~~i~~P~lii~G~ 198 (251)
T 2wtm_A 147 --LG-----------LKFDPENI-------PDE-LD---AWDGRKLKGNY---VRVAQT-IRVEDFVDKYTKPVLIVHGD 198 (251)
T ss_dssp --TT-----------EECBTTBC-------CSE-EE---ETTTEEEETHH---HHHHTT-CCHHHHHHHCCSCEEEEEET
T ss_pred --cc-----------ccCCchhc-------chH-Hh---hhhccccchHH---HHHHHc-cCHHHHHHhcCCCEEEEEeC
Confidence 00 00000000 000 00 00000000111 111112 34556677899999999999
Q ss_pred CCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 253 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|.++ +..+.+.+.+++ +++++++++||++ .++|+++++.|.+||++.
T Consensus 199 ~D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 199 QDEAVPYEASVAFSKQYKN--CKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp TCSSSCHHHHHHHHHHSSS--EEEEEETTCCTTC-TTTHHHHHHHHHHHHHHH
T ss_pred CCCCcChHHHHHHHHhCCC--cEEEEECCCCccc-chhHHHHHHHHHHHHHHh
Confidence 99998 566778888876 9999999999999 999999999999999864
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-30 Score=226.42 Aligned_cols=273 Identities=14% Similarity=0.140 Sum_probs=172.1
Q ss_pred eCCCeeEEEEEccCCC---CCeEEEecCCCCChhhh---hcccccchhhhh--hh-cCCeEEEEECCCC-CCCCCCCCCC
Q 018916 26 KTSHGSLSVTIYGDQD---KPALVTYPDLALNYMSC---FQGLFFCPEACS--LL-LHNFCIYHINPPG-HEFGAAAISD 95 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~~---~p~vv~lHG~~~~~~~~---~~~~~~~~~~~~--~l-~~g~~vi~~D~~G-~G~s~~~~~~ 95 (349)
..++.+++|...|+++ +|+|||+||++++...+ ...-+|...+.. .+ .+||+|+++|+|| ||.|..+...
T Consensus 40 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~ 119 (377)
T 2b61_A 40 KLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSI 119 (377)
T ss_dssp EECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSB
T ss_pred eecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCccc
Confidence 3466789999999654 78999999999887541 000013333221 24 7899999999999 6877643210
Q ss_pred C----------CCCCCHHHHHHHHHHHHHHcCCCcEE-EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh
Q 018916 96 D----------EPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (349)
Q Consensus 96 ~----------~~~~~~~~~~~~l~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (349)
. ...++++++++++.++++.++.++++ |+||||||.+|+.+|.++|++|+++|++++............
T Consensus 120 ~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 199 (377)
T 2b61_A 120 NPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFN 199 (377)
T ss_dssp CTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHH
T ss_pred CccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHH
Confidence 0 01479999999999999999999998 999999999999999999999999999999865432111110
Q ss_pred hhhhhHHHHhc-C-----c------c------hhHH------HHHHHhhcccccccCCCCC-CchHHHHHHHH-----hh
Q 018916 165 NKVMSNLLYYY-G-----M------C------GVVK------ELLLKRYFSKQEVRGNAQV-PESDIVQACRR-----LL 214 (349)
Q Consensus 165 ~~~~~~~~~~~-~-----~------~------~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~ 214 (349)
......+... . + . .... .......+.. ........ ......+.+.. ..
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (377)
T 2b61_A 200 -HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGR-ATKSDGSFWGDYFQVESYLSYQGKKFL 277 (377)
T ss_dssp -HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTT-CBCTTCCTTSCCBHHHHHHHHHHHHHH
T ss_pred -HHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhcc-ccccccccccchHHHHHHHHhhhhhhc
Confidence 0000000000 0 0 0 0000 0011112221 11000000 00112222222 11
Q ss_pred hhccchhHHHHHHHhcC------CCChhhhccccCCceEEEEeCCCccch------hHHHHHHHhcccceeEEEEc-CCC
Q 018916 215 DERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFHS------EAVHMTSKIDRRYSALVEVQ-ACG 281 (349)
Q Consensus 215 ~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g~~D~~~~------~~~~~~~~~~~~~~~~~~i~-~~g 281 (349)
.......+......+.. ..+....+.++++|+|+|+|++|.+++ ..+.+.+.+++ +++++++ ++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~i~~~~g 355 (377)
T 2b61_A 278 ERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVD--LHFYEFPSDYG 355 (377)
T ss_dssp TTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCE--EEEEEECCTTG
T ss_pred cccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCC--ceEEEeCCCCC
Confidence 11223333333333321 123467788999999999999999983 23456677776 8999999 999
Q ss_pred CcccccChhhHHHHHHHHHhh
Q 018916 282 SMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 282 H~~~~e~p~~~~~~i~~fl~~ 302 (349)
|++++|+|+++++.|.+||++
T Consensus 356 H~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 356 HDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp GGHHHHCHHHHHHHHHHHHHT
T ss_pred chhhhcCHHHHHHHHHHHHhc
Confidence 999999999999999999975
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=229.85 Aligned_cols=262 Identities=14% Similarity=0.179 Sum_probs=163.0
Q ss_pred CCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
...+.+++.++++.++|...+ ++|+|||+||+|..+... .|... ...+.++|+|+++|+||||.|+.+ ..
T Consensus 19 ~~~~~~~v~~~~~~~~~~~~~--~~p~vv~lHG~G~~~~~~----~~~~~-~~~L~~~~~vi~~D~~G~G~S~~~---~~ 88 (292)
T 3l80_A 19 AALNKEMVNTLLGPIYTCHRE--GNPCFVFLSGAGFFSTAD----NFANI-IDKLPDSIGILTIDAPNSGYSPVS---NQ 88 (292)
T ss_dssp -CCEEEEECCTTSCEEEEEEC--CSSEEEEECCSSSCCHHH----HTHHH-HTTSCTTSEEEEECCTTSTTSCCC---CC
T ss_pred hccCcceEEecCceEEEecCC--CCCEEEEEcCCCCCcHHH----HHHHH-HHHHhhcCeEEEEcCCCCCCCCCC---Cc
Confidence 345778899999999888433 679999999764442221 14333 455678999999999999998732 23
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh--hhhhhHHHHhc
Q 018916 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY--NKVMSNLLYYY 175 (349)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~ 175 (349)
..++++++++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++............ ........ .
T Consensus 89 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~ 166 (292)
T 3l80_A 89 ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRR--Q 166 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHH--H
T ss_pred ccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHH--H
Confidence 4589999999999999999999999999999999999999999999999999996542100000000 00000000 0
Q ss_pred CcchhHH-----HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccc-hhHHHHHHHhcCCCChhhhccccCCceEEE
Q 018916 176 GMCGVVK-----ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDISEGLRKLQCRSLIF 249 (349)
Q Consensus 176 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 249 (349)
....... ......++.. ..... ...........+..... .. ......+ ...+..+.+.+ ++|+++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~l~~-~~P~lii 238 (292)
T 3l80_A 167 KLKTAADRLNYLKDLSRSHFSS-QQFKQ----LWRGYDYCQRQLNDVQSLPD-FKIRLAL-GEEDFKTGISE-KIPSIVF 238 (292)
T ss_dssp TCCSHHHHHHHHHHHHHHHSCH-HHHHH----HHHHHHHHHHHHHTTTTSTT-CCSSCCC-CGGGGCCCCCT-TSCEEEE
T ss_pred HHhccCchhhhHhhccccccCH-HHHHH----hHHHHHHHHHHHHhhhhccc-cchhhhh-cchhhhhccCC-CCCEEEE
Confidence 1111000 1122222222 10000 00111111111111110 00 0000000 00111234556 8999999
Q ss_pred EeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 250 VGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 250 ~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|++|..+ ... .+.+.+++ .+ ++++++||+++.|+|+++++.|.+||++.
T Consensus 239 ~g~~D~~~~~~~-~~~~~~~~--~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 239 SESFREKEYLES-EYLNKHTQ--TK-LILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp ECGGGHHHHHTS-TTCCCCTT--CE-EEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred EccCccccchHH-HHhccCCC--ce-eeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 99999988 233 55556665 77 89999999999999999999999999865
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=222.19 Aligned_cols=256 Identities=13% Similarity=0.185 Sum_probs=154.8
Q ss_pred ceeEEeCCC----eeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCC
Q 018916 21 KDNLIKTSH----GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 21 ~~~~i~~~~----~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~ 94 (349)
+...+.+++ +.++|+..| +++|+|||+||++.++.. |... ...+.+ +|+||++|+||||.|+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~g-~~~p~lvllHG~~~~~~~------w~~~-~~~L~~~~~~~via~Dl~GhG~S~~~-- 83 (316)
T 3c5v_A 14 SMEDVEVENETGKDTFRVYKSG-SEGPVLLLLHGGGHSALS------WAVF-TAAIISRVQCRIVALDLRSHGETKVK-- 83 (316)
T ss_dssp EEEEEEEEETTEEEEEEEEEEC-SSSCEEEEECCTTCCGGG------GHHH-HHHHHTTBCCEEEEECCTTSTTCBCS--
T ss_pred ccceEEecCCcceEEEEEEecC-CCCcEEEEECCCCccccc------HHHH-HHHHhhcCCeEEEEecCCCCCCCCCC--
Confidence 334555544 478888877 457899999999888755 4333 355566 999999999999999742
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc--CC-CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCCCCChhHHhhhhhhh
Q 018916 95 DDEPVLSVDDLADQIAEVLNHF--GL-GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l--~~-~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
....++++++++|+.++++++ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++..... .... ....
T Consensus 84 -~~~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~--~~~~--~~~~ 157 (316)
T 3c5v_A 84 -NPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTA--MDAL--NSMQ 157 (316)
T ss_dssp -CTTCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHH--HHHH--HHHH
T ss_pred -CccccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccch--hhhH--HHHH
Confidence 123589999999999999998 66 789999999999999999995 576 99999998752110 0000 0000
Q ss_pred HHHHh--cCcchhHHHHHHHhhcccccccCCCCCCchHHH-HHHHHhhhh-------------------ccchhHHHHHH
Q 018916 170 NLLYY--YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIV-QACRRLLDE-------------------RQSSNVWHFLE 227 (349)
Q Consensus 170 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------~~~~~~~~~~~ 227 (349)
..+.. ..+.. ... .....+.. ... ...... ......+.. .........+.
T Consensus 158 ~~~~~~~~~~~~-~~~-~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (316)
T 3c5v_A 158 NFLRGRPKTFKS-LEN-AIEWSVKS-GQI-----RNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWD 229 (316)
T ss_dssp HHHHHSCSCBSS-HHH-HHHHHHHT-TSC-----CCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHH
T ss_pred HHHhhCcccccc-HHH-HHHHhhhc-ccc-----cchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhh
Confidence 00000 00000 000 00000000 000 000000 000000000 00000000000
Q ss_pred HhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhccc
Q 018916 228 AINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 305 (349)
Q Consensus 228 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 305 (349)
... ......+.++++|+|+|+|++|.+... .......++ .++++++++||++++|+|+++++.|.+||++...
T Consensus 230 ~~~--~~~~~~~~~i~~P~Lli~g~~D~~~~~-~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 302 (316)
T 3c5v_A 230 GWF--RGLSNLFLSCPIPKLLLLAGVDRLDKD-LTIGQMQGK--FQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRF 302 (316)
T ss_dssp HHH--TTHHHHHHHSSSCEEEEESSCCCCCHH-HHHHHHTTC--SEEEECCCCSSCHHHHSHHHHHHHHHHHHHHTTS
T ss_pred hhh--hhhHHHhhcCCCCEEEEEecccccccH-HHHHhhCCc--eeEEEcCCCCCcccccCHHHHHHHHHHHHHhccc
Confidence 000 122334557899999999999987521 122233344 8999999999999999999999999999987643
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=241.46 Aligned_cols=272 Identities=12% Similarity=0.143 Sum_probs=180.4
Q ss_pred CceeEEeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 20 ~~~~~i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
.+..++.+ +|.+++|...| ++|+|||+||++++... |...+..+..+||+|+++|+||||.|..+ ....
T Consensus 237 ~~~~~~~~~dg~~l~~~~~g--~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~D~~G~G~S~~~--~~~~ 306 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYS------WRYQIPALAQAGYRVLAMDMKGYGESSAP--PEIE 306 (555)
T ss_dssp SEEEEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTSCCC--SCGG
T ss_pred cceeEEEeCCCcEEEEEEcC--CCCEEEEEeCCCCchhH------HHHHHHHHHhCCCEEEEecCCCCCCCCCC--CCcc
Confidence 45677887 68899999998 78999999999988755 44555677778999999999999998753 2234
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh--HHh--hhhhhhH---H
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWL--YNKVMSN---L 171 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~--~~~~~~~---~ 171 (349)
.++++++++++.+++++++.++++++||||||.+|+.+|.++|++|+++|+++++....... ... ....... .
T Consensus 307 ~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 307 EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp GGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 68999999999999999999999999999999999999999999999999999876543211 000 0000000 0
Q ss_pred HHhcC-----cchhHHHHHHHhhcccccc---------------------cCCCCCCchHHHHHHHHhhhhccchhHHHH
Q 018916 172 LYYYG-----MCGVVKELLLKRYFSKQEV---------------------RGNAQVPESDIVQACRRLLDERQSSNVWHF 225 (349)
Q Consensus 172 ~~~~~-----~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (349)
+.... ...... .....++..... .........+....+...+...........
T Consensus 387 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (555)
T 3i28_A 387 FQEPGVAEAELEQNLS-RTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNW 465 (555)
T ss_dssp HHSTTHHHHHHHHCHH-HHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHT
T ss_pred hhCCCchHHHHhhhHH-HHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHH
Confidence 00000 000000 111112111000 000001123333333333322221111110
Q ss_pred HHHhcC--CCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 226 LEAING--RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 226 ~~~~~~--~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+..+.. ..+....+.++++|+|+|+|++|.++ ...+.+.+.+++ +++++++++||+++.++|+++++.|.+||+
T Consensus 466 ~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 543 (555)
T 3i28_A 466 YRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543 (555)
T ss_dssp TSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCC--ceEEEeCCCCCCcchhCHHHHHHHHHHHHH
Confidence 000000 01233456789999999999999998 556667777877 899999999999999999999999999999
Q ss_pred hcc
Q 018916 302 GYG 304 (349)
Q Consensus 302 ~~~ 304 (349)
+..
T Consensus 544 ~~~ 546 (555)
T 3i28_A 544 SDA 546 (555)
T ss_dssp HHT
T ss_pred hcc
Confidence 863
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-30 Score=231.54 Aligned_cols=268 Identities=14% Similarity=0.143 Sum_probs=171.1
Q ss_pred CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhh---hhhcCCeEEEEECCCC--CCCCCCCC--CC-C
Q 018916 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEAC---SLLLHNFCIYHINPPG--HEFGAAAI--SD-D 96 (349)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~l~~g~~vi~~D~~G--~G~s~~~~--~~-~ 96 (349)
++.+++|...|+. ++|+|||+||+++++..+. +|...+. .+..+||+|+++|+|| ||.|.... +. .
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~---~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~ 168 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTS---WWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAE 168 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGG---TCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccchhh---HHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccc
Confidence 3447899999963 3689999999998875511 2433332 2447899999999999 68775311 11 0
Q ss_pred --------CCCCCHHHHHHHHHHHHHHcCCCc-EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh
Q 018916 97 --------EPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 97 --------~~~~~~~~~~~~l~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
...++++++++++.+++++++.++ ++++||||||++|+.+|.++|++|+++|++++............ ..
T Consensus 169 ~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~-~~ 247 (444)
T 2vat_A 169 GQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWF-ET 247 (444)
T ss_dssp --CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHH-HH
T ss_pred cccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHH-HH
Confidence 013799999999999999999999 99999999999999999999999999999999876532211100 00
Q ss_pred hhHHHH-hcCcc-----------------hh-------HHHHHHHhhcccccccC-C-CC-------------------C
Q 018916 168 MSNLLY-YYGMC-----------------GV-------VKELLLKRYFSKQEVRG-N-AQ-------------------V 201 (349)
Q Consensus 168 ~~~~~~-~~~~~-----------------~~-------~~~~~~~~~~~~~~~~~-~-~~-------------------~ 201 (349)
....+. ...+. .. ..+.+.. .+.. .... . .. .
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (444)
T 2vat_A 248 QRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDE-RFHM-APGVQAGRNISSQDAKKEINGTDSGNSHR 325 (444)
T ss_dssp HHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHH-HSCC-CCCCC------------------------
T ss_pred HHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHH-Hhcc-Ccccccccccccccccccccccccccccc
Confidence 000000 00000 00 0001111 1211 1000 0 00 0
Q ss_pred --CchHHHHHHHH-----hhhhccchhHHHHHHHhcCC-------CChhhhccccCCceEEEEeCCCccc--hhHHHHHH
Q 018916 202 --PESDIVQACRR-----LLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 265 (349)
Q Consensus 202 --~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~ 265 (349)
......+.+.. .........+......+... .+..+.+.++++|+|+|+|++|.++ +..+.+.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~ 405 (444)
T 2vat_A 326 AGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGR 405 (444)
T ss_dssp ---CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHH
T ss_pred ccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00001111111 11112222333333333321 1256778899999999999999998 56677888
Q ss_pred HhcccceeEEEEc-CCCCcccccChhhHHHHHHHHHhhc
Q 018916 266 KIDRRYSALVEVQ-ACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 266 ~~~~~~~~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+++ +++++++ ++||++++|+|+++++.|.+||++.
T Consensus 406 ~~p~--~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 406 SIPN--SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp HSTT--EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred HCCC--cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 8987 9999999 8999999999999999999999764
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=226.46 Aligned_cols=261 Identities=13% Similarity=0.128 Sum_probs=168.6
Q ss_pred eEEeCCCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.++..+|.+++|..+++. .+|+|||+||++.+... |...+..+.++||+|+++|+||||.|..+ ....+
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGR------YEELARMLMGLDLLVFAHDHVGHGQSEGE---RMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGG------GHHHHHHHHTTTEEEEEECCTTSTTSCSS---TTCCS
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccch------HHHHHHHHHhCCCeEEEEcCCCCcCCCCc---CCCcC
Confidence 556668889999998754 45689999999988754 44555666667999999999999998743 23457
Q ss_pred CHHHHHHHHHHHHHHcCC----CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcC
Q 018916 101 SVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (349)
+++++++|+.++++.+.. ++++|+|||+||.+++.+|.++|++|+++|++++...................+.
T Consensus 110 ~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--- 186 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLN--- 186 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHH---
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHH---
Confidence 888899999888877643 4899999999999999999999999999999999876542211110010000000
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.+....... ................+....... ...........+....+..+.+.++++|+|+|+|++|.
T Consensus 187 -------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~ 258 (342)
T 3hju_A 187 -------LVLPNLSLG-PIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADR 258 (342)
T ss_dssp -------HHCTTCBCC-CCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCS
T ss_pred -------HhccccccC-cccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCc
Confidence 000000000 000000011222222222111110 00011111111111123446678899999999999999
Q ss_pred cc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHH---HHHHHhhc
Q 018916 256 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIP---MEYFLMGY 303 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~---i~~fl~~~ 303 (349)
++ +..+.+.+.+++.++++++++++||+++.++|+++.+. +.+||++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 259 LCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp SSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 98 56777888888555999999999999999999866655 56677665
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=230.77 Aligned_cols=273 Identities=13% Similarity=0.101 Sum_probs=172.1
Q ss_pred CceeEEeCCCeeEEEEEccCCC-------C--CeEEEecCCCCChhhhhcccccchhhhhhh----cCCe---EEEEECC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQD-------K--PALVTYPDLALNYMSCFQGLFFCPEACSLL----LHNF---CIYHINP 83 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~-------~--p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l----~~g~---~vi~~D~ 83 (349)
.+..++..+|.+++|..+|+.+ + |+|||+||++++... |...+..+. ..|| +|+++|+
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~------~~~~~~~L~~~~~~~G~~~~~vi~~D~ 94 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVV------WEYYLPRLVAADAEGNYAIDKVLLIDQ 94 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGG------GGGGGGGSCCCBTTTTEEEEEEEEECC
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHH------HHHHHHHHHHhhhhcCcceeEEEEEcC
Confidence 3444455688899999988643 3 699999999988755 334444454 2389 9999999
Q ss_pred CCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHcC----CCc--EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 84 PGHEFGAAAISD-DEPVLSVDDLADQIAEVLNHFG----LGA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 84 ~G~G~s~~~~~~-~~~~~~~~~~~~~l~~~l~~l~----~~~--v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
||||.|+.+... ....++++++++|+.++++.+. ..+ ++|+||||||.+++.+|.++|++|+++|++++....
T Consensus 95 ~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 174 (398)
T 2y6u_A 95 VNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVIT 174 (398)
T ss_dssp TTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC
T ss_pred CCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccc
Confidence 999988743111 1235899999999999998743 444 999999999999999999999999999999987754
Q ss_pred CC--------hhHHh--hhhhhhHHHHhcCcchh-HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-------
Q 018916 157 PS--------WTEWL--YNKVMSNLLYYYGMCGV-VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ------- 218 (349)
Q Consensus 157 ~~--------~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 218 (349)
.. ..... ........+.......+ ....... ++....+.. ...++..+.+........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T 2y6u_A 175 RKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVK-YMRNGSFFT---NAHSQILQNIIDFERTKASGDDEDG 250 (398)
T ss_dssp CCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHH-HHHHTSTTT---TSCHHHHHHHHHHHEEC--------
T ss_pred ccccccccccccccccccchhhHHHhhhhccccCCCHHHHHH-HhhcCcccc---cCCHHHHHHHHHhcCccccccccCC
Confidence 11 00000 00000011110000000 0000111 111001000 113334443332111000
Q ss_pred -----chhHHHHHHHhcC----CCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCccccc
Q 018916 219 -----SSNVWHFLEAING----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE 287 (349)
Q Consensus 219 -----~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 287 (349)
.......+..+.. ..+....+.++++|+|+|+|++|.++ ...+.+.+.+++ +++++++++||+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~--~~~~~~~~~gH~~~~e 328 (398)
T 2y6u_A 251 GPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN--YHLDVIPGGSHLVNVE 328 (398)
T ss_dssp CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSS--EEEEEETTCCTTHHHH
T ss_pred CceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCC--ceEEEeCCCCccchhc
Confidence 0000001111110 01233567889999999999999998 566778888887 9999999999999999
Q ss_pred ChhhHHHHHHHHHhhcc
Q 018916 288 QPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 288 ~p~~~~~~i~~fl~~~~ 304 (349)
+|+++++.|.+||++..
T Consensus 329 ~p~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 329 APDLVIERINHHIHEFV 345 (398)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999998763
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-33 Score=239.86 Aligned_cols=270 Identities=15% Similarity=0.187 Sum_probs=169.5
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-CCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPV 99 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~-~~~~ 99 (349)
+.+++.++|.+++|...| ++|+|||+||++++... |...+ ..+.+||+|+++|+||||.|..+... ....
T Consensus 6 ~~~~~~~~g~~~~~~~~g--~~p~vv~lHG~~~~~~~------~~~~~-~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~ 76 (304)
T 3b12_A 6 ERRLVDVGDVTINCVVGG--SGPALLLLHGFPQNLHM------WARVA-PLLANEYTVVCADLRGYGGSSKPVGAPDHAN 76 (304)
Confidence 556778899999999988 78899999999887654 43333 44558999999999999998753110 0345
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh--hh--HHH-Hh
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV--MS--NLL-YY 174 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~--~~~-~~ 174 (349)
++++++++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++............... .. ... ..
T Consensus 77 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
T 3b12_A 77 YSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQP 156 (304)
Confidence 89999999999999999999999999999999999999999999999999998765432211100000 00 000 00
Q ss_pred ----cCcchhHHHHHHHh-hcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhcC---CCChhhhccccCCc
Q 018916 175 ----YGMCGVVKELLLKR-YFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAING---RPDISEGLRKLQCR 245 (349)
Q Consensus 175 ----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~i~~P 245 (349)
..+.......+... ++.. .. .......++..+.+...+.... .......+..... ..+....+.++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 234 (304)
T 3b12_A 157 APYPEKVIGADPDTFYEGCLFGW-GA-TGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCP 234 (304)
Confidence 00000000001111 1110 00 0000001222222222111100 0111111111111 01111226789999
Q ss_pred eEEEEeCCCccc---hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 246 SLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 246 vlii~g~~D~~~---~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+|+|+|++|..+ ...+.+.+..++ ++++++ ++||++++++|+++++.|.+||++..
T Consensus 235 ~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 235 ALVFSGSAGLMHSLFEMQVVWAPRLAN--MRFASL-PGGHFFVDRFPDDTARILREFLSDAR 293 (304)
Confidence 999999999654 344445666666 888888 99999999999999999999999873
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-29 Score=220.53 Aligned_cols=270 Identities=10% Similarity=0.051 Sum_probs=164.0
Q ss_pred eeEEeCCCeeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcC----------CeEEEEECCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH----------NFCIYHINPPGHEFG 89 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~----------g~~vi~~D~~G~G~s 89 (349)
...+.++|.+++|...++ +++++|||+||++++... |...+ ..+.+ +|+|+++|+||||.|
T Consensus 70 ~~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~------~~~~~-~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S 142 (388)
T 4i19_A 70 QFTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVE------FLDII-GPLTDPRAHGGDPADAFHLVIPSLPGFGLS 142 (388)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGG------GHHHH-HHHHCGGGGTSCGGGCEEEEEECCTTSGGG
T ss_pred cEEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHH------HHHHH-HHHhCcccccCCCCCCeEEEEEcCCCCCCC
Confidence 455677999999987643 467899999999988755 43333 44444 999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh---------
Q 018916 90 AAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--------- 160 (349)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--------- 160 (349)
+.+. ...++++++++++.++++.++.++++++||||||.+++.+|.++|++|++++++++........
T Consensus 143 ~~~~---~~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~l~~~ 219 (388)
T 4i19_A 143 GPLK---SAGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNLSGEPGELETLSDA 219 (388)
T ss_dssp CCCS---SCCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCBCCCGGGGGGCCHH
T ss_pred CCCC---CCCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCCCCcccccccCCHH
Confidence 8542 2257999999999999999999999999999999999999999999999999999765432110
Q ss_pred HHhhhhhhhHHHHh-------cCcc-hhH-----------HHHHHHhhcccccccCC--CCCCchHHHHHHHHhhhhccc
Q 018916 161 EWLYNKVMSNLLYY-------YGMC-GVV-----------KELLLKRYFSKQEVRGN--AQVPESDIVQACRRLLDERQS 219 (349)
Q Consensus 161 ~~~~~~~~~~~~~~-------~~~~-~~~-----------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 219 (349)
.............. .... ..+ ...+...+......... ......++.....-.+.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ll~~~~~y~~t~~~ 299 (388)
T 4i19_A 220 DKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLMLTHISLFWFTATG 299 (388)
T ss_dssp HHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHHHHHHHHHHhcCCc
Confidence 00000000000000 0000 000 00001111100000000 000011222221111111111
Q ss_pred hhHHHHHHHhc--CCC-ChhhhccccCCceEEEEeCCCccchhHHHHHHHh-cccceeEEEEcCCCCcccccChhhHHHH
Q 018916 220 SNVWHFLEAIN--GRP-DISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKI-DRRYSALVEVQACGSMVTEEQPHAMLIP 295 (349)
Q Consensus 220 ~~~~~~~~~~~--~~~-~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 295 (349)
......+.... ... -....+..+++|+++++|.+|..... ..+.+.. ++ ..++.+++++||++++|+|+.+++.
T Consensus 300 ~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p-~~~~~~~~~~-~~~~~~~~~gGHf~~~E~Pe~~~~~ 377 (388)
T 4i19_A 300 GSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPV-RSLAERDFKQ-IVHWAELDRGGHFSAMEEPDLFVDD 377 (388)
T ss_dssp HHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCC-HHHHHHHBTT-EEEEEECSSCBSSHHHHCHHHHHHH
T ss_pred hhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCccccccc-HHHHHHhCCC-eEEEEECCCCcCccchhcHHHHHHH
Confidence 11111111111 100 01225677899999999999965522 2333333 23 2678889999999999999999999
Q ss_pred HHHHHhhc
Q 018916 296 MEYFLMGY 303 (349)
Q Consensus 296 i~~fl~~~ 303 (349)
|.+|++++
T Consensus 378 l~~fl~~~ 385 (388)
T 4i19_A 378 LRTFNRTL 385 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=218.03 Aligned_cols=280 Identities=11% Similarity=0.075 Sum_probs=168.0
Q ss_pred CCCCCceeEEeC-CCeeEEEEEccC--------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC
Q 018916 16 PPPSGKDNLIKT-SHGSLSVTIYGD--------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH 86 (349)
Q Consensus 16 ~~~~~~~~~i~~-~~~~l~~~~~g~--------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~ 86 (349)
..+..+.+.+.+ +|..+++....+ +.+|+|||+||+++++..|............+.++||+|+++|+|||
T Consensus 23 ~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred cCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 344556677776 555788776632 26789999999998876643211011122255667999999999999
Q ss_pred CCCCCCC-----CCCCCCCCHHHHHH-HHHHHH----HHcCCCcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCC
Q 018916 87 EFGAAAI-----SDDEPVLSVDDLAD-QIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPL 153 (349)
Q Consensus 87 G~s~~~~-----~~~~~~~~~~~~~~-~l~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 153 (349)
|.|.... ......++++++++ |+.+++ +.++.++++++||||||.+++.+|.++|+ +|+++|++++.
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~ 182 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPV 182 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCC
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCc
Confidence 9987521 11111579999998 777755 46788999999999999999999999998 89999999987
Q ss_pred CCCCChhHHhhhhh-h--hHHHHhcCc----c-hhHHHHH-----------------HHhhcccccccCCCCCCchHHHH
Q 018916 154 CKAPSWTEWLYNKV-M--SNLLYYYGM----C-GVVKELL-----------------LKRYFSKQEVRGNAQVPESDIVQ 208 (349)
Q Consensus 154 ~~~~~~~~~~~~~~-~--~~~~~~~~~----~-~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~ 208 (349)
.............. . .......+. . ......+ ...+... ... ....+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~ 257 (377)
T 1k8q_A 183 ATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGF-DTM----NLNMSRLD 257 (377)
T ss_dssp SCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCC-CGG----GSCGGGHH
T ss_pred hhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCC-Ccc----cCCHHHHH
Confidence 65432111000000 0 000000000 0 0000000 0000000 000 00111111
Q ss_pred HHHHhhhhc-cchhHHHHHH--------------------HhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHH
Q 018916 209 ACRRLLDER-QSSNVWHFLE--------------------AINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 265 (349)
Q Consensus 209 ~~~~~~~~~-~~~~~~~~~~--------------------~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~ 265 (349)
.+....... .......+.. .+.........+.++++|+|+|+|++|.++ +..+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 337 (377)
T 1k8q_A 258 VYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLS 337 (377)
T ss_dssp HHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHT
T ss_pred HHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHH
Confidence 111111000 0001111111 111101123347889999999999999998 56677888
Q ss_pred Hhccccee-EEEEcCCCCcccc---cChhhHHHHHHHHHhh
Q 018916 266 KIDRRYSA-LVEVQACGSMVTE---EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 266 ~~~~~~~~-~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 302 (349)
.+++ .+ +++++++||+.++ ++|+++.+.|.+||++
T Consensus 338 ~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 338 KLPN--LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TCTT--EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred hCcC--cccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 8887 66 9999999999996 8899999999999975
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-29 Score=209.62 Aligned_cols=243 Identities=12% Similarity=0.113 Sum_probs=166.2
Q ss_pred CceeEEeC----CCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 20 GKDNLIKT----SHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 20 ~~~~~i~~----~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
.+.+++++ +|.+++|...++. .+|+|||+||++++...+.... ....+.++||+|+++|+||||.|..+
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~- 83 (270)
T 3llc_A 9 IETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALE----MDDLAASLGVGAIRFDYSGHGASGGA- 83 (270)
T ss_dssp EEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHH----HHHHHHHHTCEEEEECCTTSTTCCSC-
T ss_pred CCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHH----HHHHHHhCCCcEEEeccccCCCCCCc-
Confidence 35566666 8889999866543 3899999999988754432111 12233367999999999999998742
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh---hh---cccceeEEecCCCCCCChhHHhhhhh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK---YR---HRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~p---~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
...++++++++++.++++.++.++++++|||+||.+|+.+|.+ +| ++|+++|++++....... .
T Consensus 84 ---~~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~---~---- 153 (270)
T 3llc_A 84 ---FRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSD---L---- 153 (270)
T ss_dssp ---GGGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHH---T----
T ss_pred ---cccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhh---h----
Confidence 2458999999999999999999999999999999999999999 99 899999999987643110 0
Q ss_pred hhHHHHhcCcchhHHHHHHHhhccc--ccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSK--QEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 245 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 245 (349)
....+.......+....... ..+... .. .....+.. .... .+....+.++++|
T Consensus 154 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------~~~~~~~~---~~~~-~~~~~~~~~~~~P 208 (270)
T 3llc_A 154 -----IEPLLGDRERAELAENGYFEEVSEYSPE----PN------------IFTRALME---DGRA-NRVMAGMIDTGCP 208 (270)
T ss_dssp -----TGGGCCHHHHHHHHHHSEEEECCTTCSS----CE------------EEEHHHHH---HHHH-TCCTTSCCCCCSC
T ss_pred -----hhhhhhhhhhhhhhccCcccChhhcccc----hh------------HHHHHHHh---hhhh-hhhhhhhhcCCCC
Confidence 00011111111111111110 000000 00 00011111 1111 2334567788999
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccc-cChhhHHHHHHHHHhh
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 302 (349)
+++++|++|.++ +..+.+.+.+++.++++++++++||+... +.++++.+.|.+||++
T Consensus 209 ~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 209 VHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred EEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 999999999998 56777888888756899999999996554 7789999999999975
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-30 Score=215.58 Aligned_cols=240 Identities=11% Similarity=0.038 Sum_probs=168.9
Q ss_pred CCceeEEeCCCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
..+..++..+|.+++|..+++. .+|+|||+||++++... .+|......+..+||+|+++|+||||.|..+
T Consensus 21 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~---- 92 (270)
T 3pfb_A 21 GMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNT----SLLREIANSLRDENIASVRFDFNGHGDSDGK---- 92 (270)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTC----HHHHHHHHHHHHTTCEEEEECCTTSTTSSSC----
T ss_pred cceEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccc----cHHHHHHHHHHhCCcEEEEEccccccCCCCC----
Confidence 3466778889999999998864 36799999999877412 1133445566678999999999999998742
Q ss_pred CCCCCHHHHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 97 EPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
...++++++++|+.++++.+ +.++++++|||+||.+|+.+|.++|++|+++|++++.......... .. .
T Consensus 93 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~---~~----~ 165 (270)
T 3pfb_A 93 FENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALE---GN----T 165 (270)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHH---TE----E
T ss_pred CCccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhh---hh----h
Confidence 34578999999999999887 6789999999999999999999999999999999987542110000 00 0
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
. ...+.. ... ... ...........+.... .. .+..+.+.++++|+++++|+
T Consensus 166 ---~----------~~~~~~-~~~------~~~-----~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~P~l~i~g~ 216 (270)
T 3pfb_A 166 ---Q----------GVTYNP-DHI------PDR-----LPFKDLTLGGFYLRIA---QQ-LPIYEVSAQFTKPVCLIHGT 216 (270)
T ss_dssp ---T----------TEECCT-TSC------CSE-----EEETTEEEEHHHHHHH---HH-CCHHHHHTTCCSCEEEEEET
T ss_pred ---h----------ccccCc-ccc------ccc-----ccccccccchhHhhcc---cc-cCHHHHHhhCCccEEEEEcC
Confidence 0 000000 000 000 0000000001111111 11 34556677889999999999
Q ss_pred CCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 253 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+|.++ ...+.+.+.+++ +++++++++||+++.++++++.+.|.+||++..
T Consensus 217 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 217 DDTVVSPNASKKYDQIYQN--STLHLIEGADHCFSDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp TCSSSCTHHHHHHHHHCSS--EEEEEETTCCTTCCTHHHHHHHHHHHHHHC---
T ss_pred CCCCCCHHHHHHHHHhCCC--CeEEEcCCCCcccCccchHHHHHHHHHHHhhcC
Confidence 99998 566778888887 999999999999999999999999999998763
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-29 Score=214.53 Aligned_cols=230 Identities=9% Similarity=0.055 Sum_probs=143.1
Q ss_pred ceeEEeC-CCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~ 93 (349)
+.+.+.+ +|.+++|...++. .+|+|||+||++.+... |...+..+.++||+|+++|+||| |.|+.+
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~------~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~- 80 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH------FAGLAEYLSTNGFHVFRYDSLHHVGLSSGS- 80 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGG------GHHHHHHHHTTTCCEEEECCCBCC-------
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchH------HHHHHHHHHHCCCEEEEeeCCCCCCCCCCc-
Confidence 3445555 6678999888753 46899999999988644 54555555567999999999999 988742
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
...++++++++|+.++++.+ +.++++|+||||||.+|+.+|.+ | +|+++|++++.... .... ..
T Consensus 81 ---~~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~---~~~~-----~~ 147 (305)
T 1tht_A 81 ---IDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNL---RDTL-----EK 147 (305)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCH---HHHH-----HH
T ss_pred ---ccceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhH---HHHH-----HH
Confidence 23578999999988888754 88899999999999999999998 7 89999998865321 1100 00
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcC--CCChhhhccccCCceEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING--RPDISEGLRKLQCRSLI 248 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvli 248 (349)
.. ........ ...+.. ..... ...... . .+......... ..+..+.+.++++|+|+
T Consensus 148 ~~-~~~~~~~~-----~~~~~~-~~~~~--~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 205 (305)
T 1tht_A 148 AL-GFDYLSLP-----IDELPN-DLDFE--GHKLGS-E------------VFVRDCFEHHWDTLDSTLDKVANTSVPLIA 205 (305)
T ss_dssp HH-SSCGGGSC-----GGGCCS-EEEET--TEEEEH-H------------HHHHHHHHTTCSSHHHHHHHHTTCCSCEEE
T ss_pred Hh-hhhhhhcc-----hhhCcc-ccccc--ccccCH-H------------HHHHHHHhccccchhhHHHHHhhcCCCEEE
Confidence 00 00000000 000000 00000 000000 0 00000000000 00123457789999999
Q ss_pred EEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHH
Q 018916 249 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAML 293 (349)
Q Consensus 249 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 293 (349)
|+|++|.++ ...+.+.+.++.+++++++++++||.++ ++|+.+.
T Consensus 206 i~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~ 251 (305)
T 1tht_A 206 FTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLR 251 (305)
T ss_dssp EEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHH
T ss_pred EEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHH
Confidence 999999998 4566788877655589999999999986 8887543
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-28 Score=198.12 Aligned_cols=193 Identities=17% Similarity=0.234 Sum_probs=159.8
Q ss_pred CceeEEeCCCeeEE---EEEccCCCCCeEEEecCCCCChhhhhcccccch--hhhhhhcCCeEEEEECCCCCCCC---CC
Q 018916 20 GKDNLIKTSHGSLS---VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCP--EACSLLLHNFCIYHINPPGHEFG---AA 91 (349)
Q Consensus 20 ~~~~~i~~~~~~l~---~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~--~~~~~l~~g~~vi~~D~~G~G~s---~~ 91 (349)
.++.++.+++.+++ |...| ++|+|||+||++.+... |.. ....+.++||+|+++|+||+|.| ..
T Consensus 4 ~~~~~~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~------~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~ 75 (207)
T 3bdi_A 4 LQEEFIDVNGTRVFQRKMVTDS--NRRSIALFHGYSFTSMD------WDKADLFNNYSKIGYNVYAPDYPGFGRSASSEK 75 (207)
T ss_dssp CEEEEEEETTEEEEEEEECCTT--CCEEEEEECCTTCCGGG------GGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTT
T ss_pred ceeEEEeeCCcEEEEEEEeccC--CCCeEEEECCCCCCccc------cchHHHHHHHHhCCCeEEEEcCCcccccCcccC
Confidence 46778888999999 55444 67899999999988754 334 45566677999999999999988 53
Q ss_pred CCCCCCCCC-CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 92 AISDDEPVL-SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 92 ~~~~~~~~~-~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
+ ...+ +++++++++.++++.++.++++++|||+||.+++.++.++|+++++++++++..... .
T Consensus 76 ~----~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~-~----------- 139 (207)
T 3bdi_A 76 Y----GIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES-L----------- 139 (207)
T ss_dssp T----CCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG-G-----------
T ss_pred C----CCCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc-h-----------
Confidence 2 2345 899999999999999999999999999999999999999999999999999873211 0
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
...+.++++|+++++
T Consensus 140 -----------------------------------------------------------------~~~~~~~~~p~l~i~ 154 (207)
T 3bdi_A 140 -----------------------------------------------------------------KGDMKKIRQKTLLVW 154 (207)
T ss_dssp -----------------------------------------------------------------HHHHTTCCSCEEEEE
T ss_pred -----------------------------------------------------------------hHHHhhccCCEEEEE
Confidence 122345679999999
Q ss_pred eCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|++|.++ ...+.+.+.+++ .++++++++||..+.++++++.+.|.+||+++
T Consensus 155 g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 207 (207)
T 3bdi_A 155 GSKDHVVPIALSKEYASIISG--SRLEIVEGSGHPVYIEKPEEFVRITVDFLRNL 207 (207)
T ss_dssp ETTCTTTTHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred ECCCCccchHHHHHHHHhcCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHhhC
Confidence 9999998 566678888876 89999999999999999999999999999863
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=217.61 Aligned_cols=248 Identities=10% Similarity=0.135 Sum_probs=167.2
Q ss_pred ccCCCCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 13 METPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
.++.....++.++..++..++|.. | ++|+|||+||++++... |...+..+.++||+|+++|+||||.|..+
T Consensus 14 ~~~~~~~m~~~~~~~~g~~~~~~~-g--~~~~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 84 (270)
T 3rm3_A 14 LVPRGSHMSEQYPVLSGAEPFYAE-N--GPVGVLLVHGFTGTPHS------MRPLAEAYAKAGYTVCLPRLKGHGTHYED 84 (270)
T ss_dssp -------CCCSSCCCTTCCCEEEC-C--SSEEEEEECCTTCCGGG------THHHHHHHHHTTCEEEECCCTTCSSCHHH
T ss_pred ccccccccCCCccCCCCCcccccC-C--CCeEEEEECCCCCChhH------HHHHHHHHHHCCCEEEEeCCCCCCCCccc
Confidence 333334445556666777777763 3 67999999999988754 44555666677999999999999988632
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
...++++++++|+.++++.+. .++++++|||+||.+|+.+|.++|+ |+++|++++...............
T Consensus 85 ----~~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~--- 156 (270)
T 3rm3_A 85 ----MERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGG--- 156 (270)
T ss_dssp ----HHTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC-----
T ss_pred ----cccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcch---
Confidence 234799999999999999987 7899999999999999999999999 999999999775532211110000
Q ss_pred HHHhcCcchhHHHHHHHhhccc--ccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSK--QEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 248 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 248 (349)
.. ..++.. ........ .. ..+.......+....... .+....+.++++|+|+
T Consensus 157 -----~~---------~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~li 210 (270)
T 3rm3_A 157 -----EL---------PRYLDSIGSDLKNPDV--KE-------LAYEKTPTASLLQLARLM---AQTKAKLDRIVCPALI 210 (270)
T ss_dssp ------C---------CSEEECCCCCCSCTTC--CC-------CCCSEEEHHHHHHHHHHH---HHHHHTGGGCCSCEEE
T ss_pred -----hH---------HHHHHHhCccccccch--Hh-------hcccccChhHHHHHHHHH---HHHHhhhhhcCCCEEE
Confidence 00 000000 00000000 00 000000111111111111 1234557788999999
Q ss_pred EEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccCh-hhHHHHHHHHHhhc
Q 018916 249 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP-HAMLIPMEYFLMGY 303 (349)
Q Consensus 249 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~ 303 (349)
++|++|.++ ...+.+.+.+++.++++++++++||+++.+++ +++.+.|.+||++.
T Consensus 211 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 211 FVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp EEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred EECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 999999998 66778888998755699999999999999886 89999999999875
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=211.67 Aligned_cols=272 Identities=10% Similarity=0.072 Sum_probs=159.2
Q ss_pred eeEEeCCCeeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhc------CCeEEEEECCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL------HNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~------~g~~vi~~D~~G~G~s~~~~ 93 (349)
...+.++|.+++|...++ +++++|||+||++++... |...+..+.. .||+|+++|+||||.|+.+.
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~------~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~ 160 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVE------FYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP 160 (408)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGG------GHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSC
T ss_pred CEEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHH------HHHHHHHHhcccccccCceEEEEECCCCCCCCCCCC
Confidence 455677999999999875 467899999999988755 4344344444 48999999999999998542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCC-cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC--------ChhHHhh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP--------SWTEWLY 164 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--------~~~~~~~ 164 (349)
....++++++++++.++++.++.+ +++++||||||.+++.+|.++|+.+..++++.+..... .......
T Consensus 161 --~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~~l~~~e~~~ 238 (408)
T 3g02_A 161 --LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIESLSAAEKEG 238 (408)
T ss_dssp --SSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGGGSCHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccccCCCHHHHHH
Confidence 134589999999999999999997 99999999999999999999977544444443333221 0001000
Q ss_pred hhhhhHHHHhcCcchh--------------------HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHH
Q 018916 165 NKVMSNLLYYYGMCGV--------------------VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWH 224 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (349)
........ ..+.... ....+...+... ... ....+++...+...+..........
T Consensus 239 ~~~~~~~~-~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w---~d~-~~~~d~ll~~v~~y~~t~~~~~s~~ 313 (408)
T 3g02_A 239 IARMEKFM-TDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQW---VDK-PLPSETILEMVSLYWLTESFPRAIH 313 (408)
T ss_dssp HHHHHHHH-HHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHS---CSS-CCCHHHHHHHHHHHHHTTHHHHHGG
T ss_pred HHHHHHHH-HhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhc---cCC-CCCHHHHHHHHHHHHhhccchhHHH
Confidence 00000000 0000000 000011111100 000 0111222222211111110000001
Q ss_pred HHHHhcCCCCh--h----hhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHH
Q 018916 225 FLEAINGRPDI--S----EGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEY 298 (349)
Q Consensus 225 ~~~~~~~~~~~--~----~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 298 (349)
.+......... . ..+..+++|++++.|.+|.+... +.+.+...+ .+.+.+++++||++++|+|+++++.|.+
T Consensus 314 ~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p-~~~~~~~~~-~~~~~~~~~gGHf~~lE~Pe~~~~~l~~ 391 (408)
T 3g02_A 314 TYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVP-RSWIATTGN-LVFFRDHAEGGHFAALERPRELKTDLTA 391 (408)
T ss_dssp GHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCC-HHHHGGGEE-EEEEEECSSCBSCHHHHCHHHHHHHHHH
T ss_pred HHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCc-HHHHHhcCC-eeEEEECCCCcCchhhhCHHHHHHHHHH
Confidence 11111110000 0 14567899999999999966522 233333332 3778899999999999999999999999
Q ss_pred HHhhcccccc
Q 018916 299 FLMGYGLYRP 308 (349)
Q Consensus 299 fl~~~~~~~~ 308 (349)
|++++....+
T Consensus 392 fl~~~~~~~~ 401 (408)
T 3g02_A 392 FVEQVWQKGR 401 (408)
T ss_dssp HHHHHC----
T ss_pred HHHHHHHcCc
Confidence 9998764443
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=201.49 Aligned_cols=221 Identities=12% Similarity=0.058 Sum_probs=154.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHcCCC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL-SVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~-~~~~~~~~l~~~l~~l~~~ 119 (349)
++|+|||+||++++... |......+.++||+|+++|+||||.|... ..... +++++++++.++++.+...
T Consensus 21 ~~~~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---~~~~~~~~~~~~~d~~~~i~~l~~~ 91 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPND------MNFMARALQRSGYGVYVPLFSGHGTVEPL---DILTKGNPDIWWAESSAAVAHMTAK 91 (251)
T ss_dssp SSEEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEECCCTTCSSSCTH---HHHHHCCHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeCCCCCCHHH------HHHHHHHHHHCCCEEEecCCCCCCCCChh---hhcCcccHHHHHHHHHHHHHHHHHh
Confidence 67899999999988754 43455566678999999999999988521 11123 8889999999888877654
Q ss_pred --cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccC
Q 018916 120 --AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197 (349)
Q Consensus 120 --~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
+++++||||||.+++.+|.++|+.++++++++|............ .... ..+.. .... .
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~~~~-------------~~~~~-~~~~-~--- 152 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-LKYA-------------EYMNR-LAGK-S--- 152 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-HHHH-------------HHHHH-HHTC-C---
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-HHHH-------------HHHHh-hccc-C---
Confidence 999999999999999999999999999999998876543211111 1100 00111 1111 0
Q ss_pred CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc-cceeE
Q 018916 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR-RYSAL 274 (349)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~-~~~~~ 274 (349)
.............+. .+..... +....+.++++|+++++|++|.++ ...+.+.+.+++ .+.++
T Consensus 153 ---~~~~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 218 (251)
T 3dkr_A 153 ---DESTQILAYLPGQLA-----AIDQFAT------TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDF 218 (251)
T ss_dssp ---CCHHHHHHHHHHHHH-----HHHHHHH------HHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEE
T ss_pred ---cchhhHHhhhHHHHH-----HHHHHHH------HHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceE
Confidence 001111111111110 1111111 134556788999999999999998 567778888887 67899
Q ss_pred EEEcCCCCcccccC-hhhHHHHHHHHHhhc
Q 018916 275 VEVQACGSMVTEEQ-PHAMLIPMEYFLMGY 303 (349)
Q Consensus 275 ~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 303 (349)
++++++||+.+.+. ++++.+.|.+||+++
T Consensus 219 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 219 HWYDDAKHVITVNSAHHALEEDVIAFMQQE 248 (251)
T ss_dssp EEETTCCSCTTTSTTHHHHHHHHHHHHHTT
T ss_pred EEeCCCCcccccccchhHHHHHHHHHHHhh
Confidence 99999999999975 999999999999976
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=200.51 Aligned_cols=195 Identities=15% Similarity=0.229 Sum_probs=155.8
Q ss_pred ceeEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
++.+++.++.+++|..+++ +.+|+|||+||++.+...|... .....+.++||+|+++|+||+|.|..+.
T Consensus 8 ~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~g~s~~~~---- 79 (210)
T 1imj_A 8 REGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNL----GTLHRLAQAGYRAVAIDLPGLGHSKEAA---- 79 (210)
T ss_dssp CCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHH----THHHHHHHTTCEEEEECCTTSGGGTTSC----
T ss_pred ccceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecc----hhHHHHHHCCCeEEEecCCCCCCCCCCC----
Confidence 5567778999999998754 3678999999999887653211 0245666779999999999999887432
Q ss_pred CCCCHHHHH--HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 98 PVLSVDDLA--DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 98 ~~~~~~~~~--~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
...++++.+ +++.++++.++.++++++|||+||.+++.++.++|+++++++++++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------ 141 (210)
T 1imj_A 80 APAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------ 141 (210)
T ss_dssp CSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------------
T ss_pred CcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc------------------
Confidence 235566666 899999999999999999999999999999999999999999999864310
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
. ....+.++++|+++++|++|.
T Consensus 142 ---------------------------~-------------------------------~~~~~~~~~~p~l~i~g~~D~ 163 (210)
T 1imj_A 142 ---------------------------I-------------------------------NAANYASVKTPALIVYGDQDP 163 (210)
T ss_dssp ---------------------------S-------------------------------CHHHHHTCCSCEEEEEETTCH
T ss_pred ---------------------------c-------------------------------cchhhhhCCCCEEEEEcCccc
Confidence 0 011234568999999999999
Q ss_pred cc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 256 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+ +..+.+ +.+++ .+++.++++||+.+.++++++.+.|.+||+++
T Consensus 164 -~~~~~~~~~-~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 164 -MGQTSFEHL-KQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp -HHHHHHHHH-TTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred -CCHHHHHHH-hhCCC--CCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 8 455556 66666 89999999999999999999999999999875
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=201.24 Aligned_cols=225 Identities=19% Similarity=0.245 Sum_probs=148.9
Q ss_pred CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
+..+|+|||+||++++... |... ...+.++|+|+++|+||||.|... ...++++++++++.++++.++.
T Consensus 17 ~~~~~~vv~~HG~~~~~~~------~~~~-~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~l~~~~~ 85 (267)
T 3fla_A 17 PDARARLVCLPHAGGSASF------FFPL-AKALAPAVEVLAVQYPGRQDRRHE----PPVDSIGGLTNRLLEVLRPFGD 85 (267)
T ss_dssp TTCSEEEEEECCTTCCGGG------GHHH-HHHHTTTEEEEEECCTTSGGGTTS----CCCCSHHHHHHHHHHHTGGGTT
T ss_pred CCCCceEEEeCCCCCCchh------HHHH-HHHhccCcEEEEecCCCCCCCCCC----CCCcCHHHHHHHHHHHHHhcCC
Confidence 3567899999999887644 4333 455666799999999999988732 2357999999999999999999
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhHHh---hhhhhhHHHHhcCcchhHHHHHHHhhcc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWL---YNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (349)
++++|+||||||.+|+.+|.++|++ +.+++++++........... ....+...+.... .. ....+.
T Consensus 86 ~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~ 158 (267)
T 3fla_A 86 RPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLG--GS-----DAAMLA 158 (267)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTC--HH-----HHHHHH
T ss_pred CceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhc--Cc-----chhhcc
Confidence 9999999999999999999999986 99999999775432211000 0000000000000 00 000000
Q ss_pred cccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc
Q 018916 192 KQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 269 (349)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~ 269 (349)
.++..+.+...+. ........ ...... ..+++|+++++|++|.++ ...+.+.+.+++
T Consensus 159 -----------~~~~~~~~~~~~~--------~~~~~~~~-~~~~~~-~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 217 (267)
T 3fla_A 159 -----------DPELLAMVLPAIR--------SDYRAVET-YRHEPG-RRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG 217 (267)
T ss_dssp -----------SHHHHHHHHHHHH--------HHHHHHHH-CCCCTT-CCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS
T ss_pred -----------CHHHHHHHHHHHH--------HHHHhhhc-cccccc-CcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC
Confidence 1111122111111 11111111 111111 678999999999999998 445556666654
Q ss_pred cceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 270 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 270 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+.+++++++ ||+.+.++|+++++.|.+||++..
T Consensus 218 -~~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 218 -PADLRVLPG-GHFFLVDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp -CEEEEEESS-STTHHHHTHHHHHHHHHHHTC---
T ss_pred -CceEEEecC-CceeeccCHHHHHHHHHHHhcccc
Confidence 489999997 999999999999999999998763
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=210.42 Aligned_cols=266 Identities=12% Similarity=0.066 Sum_probs=156.4
Q ss_pred CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccc-----------hhhhhhhcCCeEEEEECCCCCCCCCCCCCCC-
Q 018916 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC-----------PEACSLLLHNFCIYHINPPGHEFGAAAISDD- 96 (349)
Q Consensus 29 ~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~-----------~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~- 96 (349)
+..+.|...+.+++|+|||+||++++...+... .|. ..+..+.++||+|+++|+||||.|.......
T Consensus 37 ~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 115 (354)
T 2rau_A 37 IISLHKVNLIGGGNDAVLILPGTWSSGEQLVTI-SWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQL 115 (354)
T ss_dssp EEEEEEEEETTCCEEEEEEECCTTCCHHHHHHS-EETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGG
T ss_pred ceEEEeecccCCCCCEEEEECCCCCCccccccc-cccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccccc
Confidence 345666666556789999999999887643211 133 4455666779999999999999987421100
Q ss_pred --CCCCCHHHHHHHHHHHHHH----cCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCChhHHhh---hh
Q 018916 97 --EPVLSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLY---NK 166 (349)
Q Consensus 97 --~~~~~~~~~~~~l~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~---~~ 166 (349)
...++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++|+++|++++............ ..
T Consensus 116 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 195 (354)
T 2rau_A 116 SFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVN 195 (354)
T ss_dssp GGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCS
T ss_pred ccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhh
Confidence 0157889999999998877 5889999999999999999999999 999999999976654311111000 00
Q ss_pred hhhHHHHhc-----CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhh----hcc----c---hhHHHHHH---
Q 018916 167 VMSNLLYYY-----GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLD----ERQ----S---SNVWHFLE--- 227 (349)
Q Consensus 167 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~---~~~~~~~~--- 227 (349)
......... ..............+.. ...... .......+.+..... ... . ..+...+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (354)
T 2rau_A 196 SIEEMEAKGIYVIPSRGGPNNPIWSYALANP-DMPSPD-PKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFD 273 (354)
T ss_dssp SHHHHHHHTCCEEECSSSTTCTHHHHHHHST-TSCCSS-TTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSC
T ss_pred hHHHhhhhcccccCCCchhhhHHHHHhcccc-ccCccc-cchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhc
Confidence 000000000 00000000000001111 000000 000011111111000 000 0 00111110
Q ss_pred ------HhcCCCChhhhccccCCceEEEEeCCCccch-hHHHHHHHhcccceeEEEEcCCCCcccccCh---hhHHHHHH
Q 018916 228 ------AINGRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPME 297 (349)
Q Consensus 228 ------~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~ 297 (349)
.+. ..+..+.+.++++|+|+|+|++|.+++ .. +.+. .++++++++++||+++++++ +++++.|.
T Consensus 274 ~~~~~~~~~-~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~----~~l~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~ 347 (354)
T 2rau_A 274 PYWPYRLSL-ERDLKFDYEGILVPTIAFVSERFGIQIFDS----KILP-SNSEIILLKGYGHLDVYTGENSEKDVNSVVL 347 (354)
T ss_dssp SEEEHHHHH-TTTCCCCCTTCCCCEEEEEETTTHHHHBCG----GGSC-TTCEEEEETTCCGGGGTSSTTHHHHTHHHHH
T ss_pred ccccccccc-CcccccccccCCCCEEEEecCCCCCCccch----hhhc-cCceEEEcCCCCCchhhcCCCcHHHHHHHHH
Confidence 111 135566788999999999999998763 22 2222 24899999999999988765 89999999
Q ss_pred HHHhhc
Q 018916 298 YFLMGY 303 (349)
Q Consensus 298 ~fl~~~ 303 (349)
+||+++
T Consensus 348 ~fl~~~ 353 (354)
T 2rau_A 348 KWLSQQ 353 (354)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999875
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-28 Score=210.25 Aligned_cols=228 Identities=7% Similarity=-0.017 Sum_probs=145.4
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (349)
+++++|||+||++++... |...+..+.++ ||+|+++|+||||.|..+ ..++++++++++.++++.+
T Consensus 34 ~~~~~vvllHG~~~~~~~------~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~-----~~~~~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSYS------FRHLLEYINETHPGTVVTVLDLFDGRESLRP-----LWEQVQGFREAVVPIMAKA- 101 (302)
T ss_dssp -CCCCEEEECCTTCCGGG------GHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-----HHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEECCCCCChhH------HHHHHHHHHhcCCCcEEEEeccCCCccchhh-----HHHHHHHHHHHHHHHhhcC-
Confidence 467899999999988755 54555555566 899999999999987632 1268899999999999888
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCCCCCChh-HHhhhhhhhHHHHhcCcchhHHHHHHHhhccc---
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPSWT-EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK--- 192 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 192 (349)
.++++++||||||.+|+.+|.++|+ +|+++|++++........ .... .. .............+..
T Consensus 102 ~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 102 PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLK-WL---------FPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHH-HH---------CTTCCHHHHHHHHTSTTGG
T ss_pred CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhh-hH---------HHHHHHHHHhhccchHHHH
Confidence 6899999999999999999999999 799999999876532211 1110 00 0000000011111111
Q ss_pred ----ccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCC---CChhhhccccCCceEEEEeCCCccc--hhHHHH
Q 018916 193 ----QEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR---PDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 263 (349)
Q Consensus 193 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~ 263 (349)
..+.. .+...+.+.. ...+...+...... .+..+.+.+++ |+++|+|++|.++ ...+.+
T Consensus 172 ~~~~~~~~~-----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~ 239 (302)
T 1pja_A 172 EFSICNYWH-----DPHHDDLYLN------ASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFF 239 (302)
T ss_dssp GSTGGGGBC-----CTTCHHHHHH------HCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGT
T ss_pred Hhhhhhccc-----Chhhhhhhhc------cchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHh
Confidence 00000 0000111111 00011111100000 01355678899 9999999999988 333333
Q ss_pred HHHhcc-------------------------cceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 264 TSKIDR-------------------------RYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 264 ~~~~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
.+..++ .++++++++++||+++.|+|+++++.|.+||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 240 GFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp CEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred hhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 222221 12899999999999999999999999999873
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-26 Score=189.54 Aligned_cols=196 Identities=11% Similarity=0.101 Sum_probs=148.7
Q ss_pred eeEEeCCCeeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+..+.+.++++.+..+.+ +..|+|||+||++..+..+... .|......+.++||.|+++|+||+|.|.... .
T Consensus 25 ~~~~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~-----~ 98 (249)
T 2i3d_A 25 EVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQ-IVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF-----D 98 (249)
T ss_dssp EEEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTSTTCCSCC-----C
T ss_pred EEEEECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccch-HHHHHHHHHHHCCCEEEEECCCCCCCCCCCC-----C
Confidence 788888888887766554 4678999999986544332211 2335556667889999999999999886432 1
Q ss_pred CCHHHHHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHh
Q 018916 100 LSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (349)
.+.+++ +|+.++++.+. .++++++|||+||.+++.+|.++|+ ++++|++++......
T Consensus 99 ~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---------------- 160 (249)
T 2i3d_A 99 HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD---------------- 160 (249)
T ss_dssp SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC----------------
T ss_pred CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh----------------
Confidence 345554 66666665542 2479999999999999999999998 999999998754100
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
...+.++++|+++++|++|
T Consensus 161 -------------------------------------------------------------~~~~~~~~~P~lii~G~~D 179 (249)
T 2i3d_A 161 -------------------------------------------------------------FSFLAPCPSSGLIINGDAD 179 (249)
T ss_dssp -------------------------------------------------------------CTTCTTCCSCEEEEEETTC
T ss_pred -------------------------------------------------------------hhhhcccCCCEEEEEcCCC
Confidence 0123456899999999999
Q ss_pred ccc--hhHHHHHHHhccc---ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 255 PFH--SEAVHMTSKIDRR---YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.++ +..+.+.+.++.. +.++++++++||..+ ++++++.+.|.+||++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~ 232 (249)
T 2i3d_A 180 KVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRR 232 (249)
T ss_dssp SSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHh
Confidence 998 5667788888731 489999999999988 89999999999999876
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=181.08 Aligned_cols=199 Identities=19% Similarity=0.131 Sum_probs=145.3
Q ss_pred CCceeEEeCCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
..+...+.+.++++++..+.+. .+|+|||+||++..+..... .+|......+.++||+|+++|+||+|.|....
T Consensus 5 ~~~~~~~~~~~g~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-- 81 (208)
T 3trd_A 5 TNEDFLIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNN-KVVTTLAKALDELGLKTVRFNFRGVGKSQGRY-- 81 (208)
T ss_dssp SSSCEEEECSSSEEEEEEECCSSCCCSEEEEEECSCGGGTCCTTC-HHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC--
T ss_pred ccceEEEECCCceEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCC-chHHHHHHHHHHCCCEEEEEecCCCCCCCCCc--
Confidence 4566777776669988887764 56899999995322211111 12334555666789999999999999887432
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
.......+++.+.+..+.+.++.++++++|||+||.+++.++ .+| +++++|++++...
T Consensus 82 ~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~-------------------- 139 (208)
T 3trd_A 82 DNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVF-------------------- 139 (208)
T ss_dssp CTTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTT--------------------
T ss_pred cchHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccc--------------------
Confidence 122234555555556565666778999999999999999999 777 8999999998760
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.+ ....+..+++|+++++|++|.
T Consensus 140 ------------------~~---------------------------------------~~~~~~~~~~p~l~i~g~~D~ 162 (208)
T 3trd_A 140 ------------------YE---------------------------------------GFASLTQMASPWLIVQGDQDE 162 (208)
T ss_dssp ------------------SG---------------------------------------GGTTCCSCCSCEEEEEETTCS
T ss_pred ------------------cC---------------------------------------CchhhhhcCCCEEEEECCCCC
Confidence 00 001233457999999999999
Q ss_pred cc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 256 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++ +..+.+.+.+++ +.++++++++||+.+.+. +++.+.|.+||.
T Consensus 163 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 163 VVPFEQVKAFVNQISS-PVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp SSCHHHHHHHHHHSSS-CCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHccC-ceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 98 566677777775 389999999999988764 889999999984
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=195.10 Aligned_cols=219 Identities=14% Similarity=0.086 Sum_probs=139.6
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-CCCcE
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLGAV 121 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~v 121 (349)
|+|||+||++++... |... ...+.++|+|+++|+||||.|... ...++++++++++.++++.+ +.+++
T Consensus 52 ~~lvllHG~~~~~~~------~~~l-~~~L~~~~~v~~~D~~G~G~S~~~----~~~~~~~~~a~~~~~~l~~~~~~~~~ 120 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSA------FRGW-QERLGDEVAVVPVQLPGRGLRLRE----RPYDTMEPLAEAVADALEEHRLTHDY 120 (280)
T ss_dssp EEEEEECCTTCCGGG------GTTH-HHHHCTTEEEEECCCTTSGGGTTS----CCCCSHHHHHHHHHHHHHHTTCSSSE
T ss_pred ceEEEECCCCCChHH------HHHH-HHhcCCCceEEEEeCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHhCCCCCE
Confidence 789999999988755 4333 355566999999999999998632 34589999999999999999 78899
Q ss_pred EEEEechhHHHHHHHHHhhhcccc----eeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcc-ccccc
Q 018916 122 MCMGVTAGAYILTLFAMKYRHRVL----GLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS-KQEVR 196 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~----~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 196 (349)
+|+||||||.+|+.+|.++|+++. .++++++............ ... ...... .+..+.. .....
T Consensus 121 ~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~---------~~~-~~~~~~-~~~~~~~~~~~~~ 189 (280)
T 3qmv_A 121 ALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADH---------TLS-DTALRE-VIRDLGGLDDADT 189 (280)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGG---------GSC-HHHHHH-HHHHHTCCC----
T ss_pred EEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccccc---------ccC-HHHHHH-HHHHhCCCChhhh
Confidence 999999999999999999999887 8888776543211000000 000 000000 0111100 00000
Q ss_pred CCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeE
Q 018916 197 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL 274 (349)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~ 274 (349)
. .++..+ .....+.......... . ...+.++++|+++|+|++|.++ +..+.+.+.+++ ..++
T Consensus 190 ~-----~~~~~~--------~~~~~~~~~~~~~~~~-~-~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~ 253 (280)
T 3qmv_A 190 L-----GAAYFD--------RRLPVLRADLRACERY-D-WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTG-SFLR 253 (280)
T ss_dssp ----------CC--------TTHHHHHHHHHHHHTC-C-CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSS-CEEE
T ss_pred c-----CHHHHH--------HHHHHHHHHHHHHHhc-c-ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCC-ceEE
Confidence 0 000000 0001111112222221 1 1225688999999999999988 344456665654 3567
Q ss_pred EEEcCCCCcccc--cChhhHHHHHHHHH
Q 018916 275 VEVQACGSMVTE--EQPHAMLIPMEYFL 300 (349)
Q Consensus 275 ~~i~~~gH~~~~--e~p~~~~~~i~~fl 300 (349)
++++ +||+.++ ++++++++.|.+||
T Consensus 254 ~~~~-ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 254 RHLP-GNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEEE-EETTGGGSSHHHHHHHHHHHTTC
T ss_pred EEec-CCCeEEcCchhHHHHHHHHHhhC
Confidence 7776 6999999 89999999998875
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=196.30 Aligned_cols=225 Identities=13% Similarity=0.049 Sum_probs=161.4
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+...+..++.++.+..+++...|+|||+||++++... |......+..+||.|+++|+||||.|..+ ...+
T Consensus 7 ~~~~~~~~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~g~s~~~----~~~~ 76 (290)
T 3ksr_A 7 SSIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHH------SLVRAREAVGLGCICMTFDLRGHEGYASM----RQSV 76 (290)
T ss_dssp EEEEEEETTEEEEEEEEEEESEEEEEEECCTTCCTTT------THHHHHHHHTTTCEEECCCCTTSGGGGGG----TTTC
T ss_pred eeEEecCCCeEEEEEEecCCCCcEEEEeCCCCCCcCc------HHHHHHHHHHCCCEEEEeecCCCCCCCCC----cccc
Confidence 4556777889999998887778999999999987643 44555566677999999999999988743 2347
Q ss_pred CHHHHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHh
Q 018916 101 SVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (349)
+++++++|+.++++.+. .++++++||||||.+++.++.++| ++++++++|........ ...... ...
T Consensus 77 ~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~--~~~~~~---~~~ 149 (290)
T 3ksr_A 77 TRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW--DQPKVS---LNA 149 (290)
T ss_dssp BHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT--TSBHHH---HHH
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh--hccccc---ccC
Confidence 88999999999998873 247999999999999999999988 88999998877543210 000000 000
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
.. ....+... ..... ..+....+.++++|+|+++|++|
T Consensus 150 ---~~-----~~~~~~~~---------------------~~~~~-------------~~~~~~~~~~~~~P~lii~G~~D 187 (290)
T 3ksr_A 150 ---DP-----DLMDYRRR---------------------ALAPG-------------DNLALAACAQYKGDVLLVEAEND 187 (290)
T ss_dssp ---ST-----THHHHTTS---------------------CCCGG-------------GCHHHHHHHHCCSEEEEEEETTC
T ss_pred ---Ch-----hhhhhhhh---------------------hhhhc-------------cccHHHHHHhcCCCeEEEEecCC
Confidence 00 00001000 00000 01122335577899999999999
Q ss_pred ccc--hhHHHHHHHhcccc-eeEEEEcCCCCcccc-cChhhHHHHHHHHHhhcc
Q 018916 255 PFH--SEAVHMTSKIDRRY-SALVEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 304 (349)
.++ ...+.+.+.+++.+ .++++++++||.++. ++++++.+.+.+||++..
T Consensus 188 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 188 VIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMV 241 (290)
T ss_dssp SSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHh
Confidence 998 55677888887633 679999999998766 588999999999998763
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-25 Score=200.30 Aligned_cols=258 Identities=12% Similarity=0.062 Sum_probs=159.0
Q ss_pred CCCCceeEEeCCCeeEEEEEcc--CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC
Q 018916 17 PPSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g--~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
....+...++.++..+...... .+..|+|||+||++++...++... ...++.+||+|+++|+||||.|.....
T Consensus 132 ~~~~~~~~i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-----~~~~~~~g~~vi~~D~~G~G~s~~~~~ 206 (405)
T 3fnb_A 132 KIPLKSIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYML-----GYSGWEHDYNVLMVDLPGQGKNPNQGL 206 (405)
T ss_dssp SCCCEEEEEEETTEEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHT-----HHHHHHTTCEEEEECCTTSTTGGGGTC
T ss_pred CCCcEEEEEeECCeEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHH-----HHHHHhCCcEEEEEcCCCCcCCCCCCC
Confidence 3455777788888887644433 334589999999988876642211 125668999999999999998853211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 95 DDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
. .. .++.+|+.++++.+.. ++++++|||+||.+++.+|.++| +|+++|+++|........... ....
T Consensus 207 --~--~~-~~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~----~~~~- 275 (405)
T 3fnb_A 207 --H--FE-VDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRIS----FSTA- 275 (405)
T ss_dssp --C--CC-SCTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHH----CC---
T ss_pred --C--CC-ccHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHh----hhhh-
Confidence 1 12 1446777778887776 79999999999999999999999 899999999877542111000 0000
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
...... ....+... . . .........+...............+..+.. ......+.++++|+|+|+|+
T Consensus 276 --~~~p~~----~~~~~~~~-~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLii~G~ 342 (405)
T 3fnb_A 276 --LKAPKT----ILKWGSKL-V-T----SVNKVAEVNLNKYAWQFGQVDFITSVNEVLE-QAQIVDYNKIDVPSLFLVGA 342 (405)
T ss_dssp ----------------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHH-HCCCCCGGGCCSCEEEEEET
T ss_pred --hhCcHH----HHHHHHHH-h-h----ccchhHHHHHHHhhhhcCCCCHHHHHHHHHH-hhcccCHhhCCCCEEEEecC
Confidence 000000 00001000 0 0 0011111111111111111112111111111 01112267889999999999
Q ss_pred CCccc--hhHHHHHHHhcc--cceeEEEE---cCCCCcccccChhhHHHHHHHHHhhc
Q 018916 253 SSPFH--SEAVHMTSKIDR--RYSALVEV---QACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~--~~~~~~~i---~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|.++ .....+.+.+++ ...+++++ +++||.++.++++.+.+.|.+||++.
T Consensus 343 ~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~ 400 (405)
T 3fnb_A 343 GEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHI 400 (405)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHH
T ss_pred CCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHH
Confidence 99987 567778888874 24789999 67778888999999999999999875
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-25 Score=182.58 Aligned_cols=217 Identities=11% Similarity=0.004 Sum_probs=152.7
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC-C-
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE-P- 98 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~-~- 98 (349)
+..++..++..+.+..... .+|+|||+||++++...| ......+.++||.|+++|+||+|.|........ .
T Consensus 4 ~~~~~~~~g~~~~~~~~~~-~~~~vv~~hG~~~~~~~~------~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~ 76 (238)
T 1ufo_A 4 RTERLTLAGLSVLARIPEA-PKALLLALHGLQGSKEHI------LALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76 (238)
T ss_dssp EEEEEEETTEEEEEEEESS-CCEEEEEECCTTCCHHHH------HHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTT
T ss_pred eecccccCCEEEEEEecCC-CccEEEEECCCcccchHH------HHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccc
Confidence 3455666777765444332 788999999999887653 233345667799999999999998874322110 0
Q ss_pred -----CCCHHHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 99 -----VLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 99 -----~~~~~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
..++++.++++.++++.+ +.++++++|||+||.+++.+|.++|+.+.+++++++..........
T Consensus 77 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-------- 148 (238)
T 1ufo_A 77 YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ-------- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC--------
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh--------
Confidence 013677788877777654 4589999999999999999999999999999988876543211000
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc-CCceEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIF 249 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii 249 (349)
+.. .++ ...+. . .+....+.++ ++|++++
T Consensus 149 -------------------~~~----------~~~-----------------~~~~~---~-~~~~~~~~~~~~~P~l~i 178 (238)
T 1ufo_A 149 -------------------VVE----------DPG-----------------VLALY---Q-APPATRGEAYGGVPLLHL 178 (238)
T ss_dssp -------------------CCC----------CHH-----------------HHHHH---H-SCGGGCGGGGTTCCEEEE
T ss_pred -------------------ccC----------Ccc-----------------cchhh---c-CChhhhhhhccCCcEEEE
Confidence 000 111 00000 0 2344556677 8999999
Q ss_pred EeCCCccc--hhHHHHHHHhc-cc---ceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 250 VGESSPFH--SEAVHMTSKID-RR---YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 250 ~g~~D~~~--~~~~~~~~~~~-~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+|++|.++ +..+.+.+.++ .. +.++++++++||..+.+.++++.+.|.+|+++
T Consensus 179 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 179 HGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp EETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred ECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 99999998 56777888888 32 38999999999999998888888888888753
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=183.93 Aligned_cols=252 Identities=13% Similarity=0.111 Sum_probs=152.7
Q ss_pred EeCCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 25 IKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 25 i~~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
...+|.++++..+.+. .+|+|||+||++....... .|.......+.++|+|+++|+||+|.+. ....
T Consensus 9 ~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~---~~~~~~~~~l~~~~~v~~~d~~~~~~~~-------~~~~ 78 (275)
T 3h04_A 9 ITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKAN---DLSPQYIDILTEHYDLIQLSYRLLPEVS-------LDCI 78 (275)
T ss_dssp ECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTT---CSCHHHHHHHTTTEEEEEECCCCTTTSC-------HHHH
T ss_pred ecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchh---hhHHHHHHHHHhCceEEeeccccCCccc-------cchh
Confidence 3346778988887543 5679999999873221111 1333445666666999999999997643 1245
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhH
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
++++.+.+..+.+.++.++++++||||||.+|+.+|.+ ++++++|++++............... .... .....
T Consensus 79 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~--- 151 (275)
T 3h04_A 79 IEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSY-YAKI-AQSIN--- 151 (275)
T ss_dssp HHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHH-HHHH-HTTSC---
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccch-hhcc-cccch---
Confidence 66777777777777788899999999999999999998 78999999999876543211110000 0000 00011
Q ss_pred HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHH----hcCCCChhhhccccCCceEEEEeCCCccc
Q 018916 182 KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFVGESSPFH 257 (349)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 257 (349)
......+......... ............. ....+...+.. ..........+.+++ |+|+++|++|.++
T Consensus 152 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~ 223 (275)
T 3h04_A 152 -ETMIAQLTSPTPVVQD-QIAQRFLIYVYAR-----GTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDV 223 (275)
T ss_dssp -HHHHHTTSCSSCCSSC-SSGGGHHHHHHHH-----HHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSS
T ss_pred -HHHHhcccCCCCcCCC-ccccchhhhhhhh-----hcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCC
Confidence 1111222111011100 0000000000000 00001000000 000011123346677 9999999999998
Q ss_pred --hhHHHHHHHhcccceeEEEEcCCCCcccccCh---hhHHHHHHHHHhhc
Q 018916 258 --SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 303 (349)
Q Consensus 258 --~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 303 (349)
...+.+.+.+++ .++++++++||.++.+.+ +++.+.+.+||++.
T Consensus 224 ~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 224 PVEESEHIMNHVPH--STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp CTHHHHHHHTTCSS--EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHhcCC--ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHH
Confidence 677778888887 889999999999999988 68999999999874
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=195.76 Aligned_cols=237 Identities=8% Similarity=0.053 Sum_probs=137.6
Q ss_pred eeEEEEEcc-C-CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEEC----CCCCCCCCCCCCCCCCCCCHH
Q 018916 30 GSLSVTIYG-D-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN----PPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 30 ~~l~~~~~g-~-~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D----~~G~G~s~~~~~~~~~~~~~~ 103 (349)
..++|...| + ..+|+|||+||++.+...| .+|... ...+++||+|+++| +||||.|+. ....+
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~---~~~~~l-~~~L~~g~~Vi~~Dl~~D~~G~G~S~~-------~~~~~ 92 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSF---DYFTNL-AEELQGDWAFVQVEVPSGKIGSGPQDH-------AHDAE 92 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCS---TTHHHH-HHHHTTTCEEEEECCGGGBTTSCSCCH-------HHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccch---hHHHHH-HHHHHCCcEEEEEeccCCCCCCCCccc-------cCcHH
Confidence 678888777 3 3568999999998764332 123233 44558899999995 599998751 11234
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH--hhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhH
Q 018916 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
++.+.+..+.+.++.++++|+||||||.+|+.+|. .+|++|+++|++++....... ... ......... ..
T Consensus 93 d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~-~~~-~~~~~~~~~------~~ 164 (335)
T 2q0x_A 93 DVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENP-LFT-PEGCAARKE------HV 164 (335)
T ss_dssp HHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTST-TTS-HHHHHHHHH------HH
T ss_pred HHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhc-ccC-HHHHHHHHH------HH
Confidence 44444444445588999999999999999999999 579999999999986543210 000 000000000 00
Q ss_pred HHHHHHh-----hcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc--CCCChhhhccccCCceEEEEeCCC
Q 018916 182 KELLLKR-----YFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 182 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
. .+... ......+.. .......+..... .......+.... ...+..+.+.++++|+|+|+|++|
T Consensus 165 ~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D 235 (335)
T 2q0x_A 165 E-KLMAEGRGEDSLAMLKHYD-----IPITPARLAGGGF---PTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNV 235 (335)
T ss_dssp H-HHHHHTCTTCGGGGTTTCS-----SCCCHHHHHTCSC---SSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCT
T ss_pred H-HHhhccCccccccchhhcc-----CccCHHHHhhccC---CCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCC
Confidence 0 00000 000000000 0000111111110 000001111111 112345668899999999999999
Q ss_pred ccchh-------HHHHHHHhccccee--------E-----EEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 255 PFHSE-------AVHMTSKIDRRYSA--------L-----VEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 255 ~~~~~-------~~~~~~~~~~~~~~--------~-----~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+++. .+.+.+.+++ .+ + ++++++|| ++++.|.+||++..
T Consensus 236 ~~vp~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 236 QYKPSDEEVGTVLEGVRDHTGC--NRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLADED 295 (335)
T ss_dssp TCCCCHHHHHHHHHHHHHHSSS--SCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHHHH
T ss_pred CCCChhhhHHHHHHHHHHhcCc--cccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHhhh
Confidence 99832 3456667776 55 6 78999999 45899999998753
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=184.50 Aligned_cols=203 Identities=12% Similarity=0.045 Sum_probs=152.1
Q ss_pred CCCceeEEeCCCeeEEEEEccCC-CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
+..+...+..++.++.+..+.+. ..|+||++||++.+...+. +......+.++||.|+++|+||+|.|.......
T Consensus 10 ~~~~~~~~~~~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~----~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~ 85 (223)
T 2o2g_A 10 PQEYAVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPR----NRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTR 85 (223)
T ss_dssp CCEEEEEEEETTEEEEEEEECCTTCCEEEEEECCTTCCTTCHH----HHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHC
T ss_pred ceeeEEEEecCCeEEEEEEecCCCCceEEEEecCCCCCCCccc----hHHHHHHHHHCCCEEEEEcCCCcCCCCccchhh
Confidence 34456667778889998887654 5789999999988765431 112334555679999999999999765321111
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCC------cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLG------AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
...++++++++++.++++.+... +++++|||+||.+++.++.++|+++++++++++....
T Consensus 86 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~-------------- 151 (223)
T 2o2g_A 86 HLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL-------------- 151 (223)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG--------------
T ss_pred cccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc--------------
Confidence 22378899999999988776543 8999999999999999999999999999999884110
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
....+.++++|+++++
T Consensus 152 ----------------------------------------------------------------~~~~~~~~~~P~l~i~ 167 (223)
T 2o2g_A 152 ----------------------------------------------------------------APSALPHVKAPTLLIV 167 (223)
T ss_dssp ----------------------------------------------------------------CTTTGGGCCSCEEEEE
T ss_pred ----------------------------------------------------------------CHHHHhcCCCCEEEEE
Confidence 0023456789999999
Q ss_pred eCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
|++|.++ ....+..+... .+.+++.++++||.... +.++++.+.+.+||++.
T Consensus 168 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 168 GGYDLPVIAMNEDALEQLQ-TSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp ETTCHHHHHHHHHHHHHCC-SSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHhhC-CCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 9999988 33333444442 24899999999999766 56789999999999864
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=188.60 Aligned_cols=194 Identities=10% Similarity=0.056 Sum_probs=139.8
Q ss_pred EEEEEccCCCCCeEEEecCCCCChhhhhccccc-chhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC-------C-----
Q 018916 32 LSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF-CPEACSLLLHNFCIYHINPPGHEFGAAAISDDE-------P----- 98 (349)
Q Consensus 32 l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~-~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~-------~----- 98 (349)
+.|...++..+++|||+||++.++..|...--. ......++++||.|+++|+||||.|........ .
T Consensus 52 ~~~~~p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~ 131 (328)
T 1qlw_A 52 VRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLP 131 (328)
T ss_dssp EEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSC
T ss_pred EEEEccCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCccccc
Confidence 344444444678999999999887653210000 013456678899999999999999874311000 0
Q ss_pred --------------CCC----------------HHH------------------HHHHHHHHHHHcCCCcEEEEEechhH
Q 018916 99 --------------VLS----------------VDD------------------LADQIAEVLNHFGLGAVMCMGVTAGA 130 (349)
Q Consensus 99 --------------~~~----------------~~~------------------~~~~l~~~l~~l~~~~v~lvGhS~Gg 130 (349)
.+. +++ +++++.++++.++ +++++||||||
T Consensus 132 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~GG 209 (328)
T 1qlw_A 132 DLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQSG 209 (328)
T ss_dssp CCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGGT
T ss_pred ceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECccc
Confidence 000 444 7888888888875 89999999999
Q ss_pred HHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHH
Q 018916 131 YILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQAC 210 (349)
Q Consensus 131 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (349)
.+++.+|.++|++|+++|+++|... .
T Consensus 210 ~~a~~~a~~~p~~v~~~v~~~p~~~------------------------------------~------------------ 235 (328)
T 1qlw_A 210 IYPFQTAAMNPKGITAIVSVEPGEC------------------------------------P------------------ 235 (328)
T ss_dssp THHHHHHHHCCTTEEEEEEESCSCC------------------------------------C------------------
T ss_pred HHHHHHHHhChhheeEEEEeCCCCC------------------------------------C------------------
Confidence 9999999999999999999997540 0
Q ss_pred HHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch-------hHHHHHHHhcc--cceeEEEEcCCC
Q 018916 211 RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-------EAVHMTSKIDR--RYSALVEVQACG 281 (349)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~-------~~~~~~~~~~~--~~~~~~~i~~~g 281 (349)
+.......+++|+|+++|++|.+++ .++.+.+.++. .++++++++++|
T Consensus 236 -----------------------~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~g 292 (328)
T 1qlw_A 236 -----------------------KPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALG 292 (328)
T ss_dssp -----------------------CGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGT
T ss_pred -----------------------CHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCC
Confidence 0001112346899999999999873 34457777762 238999999666
Q ss_pred -----CcccccC-hhhHHHHHHHHHhhcc
Q 018916 282 -----SMVTEEQ-PHAMLIPMEYFLMGYG 304 (349)
Q Consensus 282 -----H~~~~e~-p~~~~~~i~~fl~~~~ 304 (349)
|+++.+. ++++++.|.+||++..
T Consensus 293 i~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 293 VHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp CCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred cCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 9999988 9999999999999864
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-25 Score=174.05 Aligned_cols=171 Identities=11% Similarity=0.074 Sum_probs=134.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCe---EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~---~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (349)
++|+|||+||++++... |......+.++|| +|+++|+||+|.|. ..+++++++++.++++.++
T Consensus 2 ~~~~vv~~HG~~~~~~~------~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~--------~~~~~~~~~~~~~~~~~~~ 67 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFN------FAGIKSYLVSQGWSRDKLYAVDFWDKTGTN--------YNNGPVLSRFVQKVLDETG 67 (181)
T ss_dssp CCCCEEEECCTTCCGGG------GHHHHHHHHHTTCCGGGEEECCCSCTTCCH--------HHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEECCcCCCHhH------HHHHHHHHHHcCCCCccEEEEecCCCCCch--------hhhHHHHHHHHHHHHHHcC
Confidence 56899999999988754 4445556667787 79999999998764 2578999999999999999
Q ss_pred CCcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccc
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV 195 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
.++++++||||||.+++.++.++ |++|+++|++++....... . .+
T Consensus 68 ~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~--------------------------------~-~~ 114 (181)
T 1isp_A 68 AKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------------------K-AL 114 (181)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------------------B-CC
T ss_pred CCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc--------------------------------c-cC
Confidence 99999999999999999999988 8999999999987432110 0 00
Q ss_pred cCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEE
Q 018916 196 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALV 275 (349)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~ 275 (349)
. . . ....++|+++++|++|.+++... ..+++ .+++
T Consensus 115 ~------~-----------------------------~-----~~~~~~p~l~i~G~~D~~v~~~~---~~~~~--~~~~ 149 (181)
T 1isp_A 115 P------G-----------------------------T-----DPNQKILYTSIYSSADMIVMNYL---SRLDG--ARNV 149 (181)
T ss_dssp C------C-----------------------------S-----CTTCCCEEEEEEETTCSSSCHHH---HCCBT--SEEE
T ss_pred C------C-----------------------------C-----CCccCCcEEEEecCCCccccccc---ccCCC--Ccce
Confidence 0 0 0 00125799999999999984331 23555 8999
Q ss_pred EEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 276 EVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 276 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+++++||+.+.+++ ++.+.|.+||++.+
T Consensus 150 ~~~~~gH~~~~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 150 QIHGVGHIGLLYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp EESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred eeccCchHhhccCH-HHHHHHHHHHhccC
Confidence 99999999999987 79999999998764
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=182.19 Aligned_cols=181 Identities=11% Similarity=0.059 Sum_probs=137.8
Q ss_pred CeeEEEEEcc-CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 29 HGSLSVTIYG-DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 29 ~~~l~~~~~g-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
++.++|...+ ++.+|+|||+||++++... |......+.++||.|+++|+||+|.+.. ...+++.+
T Consensus 40 ~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~~~~--------~~~~d~~~ 105 (262)
T 1jfr_A 40 GGTIYYPTSTADGTFGAVVISPGFTAYQSS------IAWLGPRLASQGFVVFTIDTNTTLDQPD--------SRGRQLLS 105 (262)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGGG------TTTHHHHHHTTTCEEEEECCSSTTCCHH--------HHHHHHHH
T ss_pred ceeEEecCCCCCCCCCEEEEeCCcCCCchh------HHHHHHHHHhCCCEEEEeCCCCCCCCCc--------hhHHHHHH
Confidence 4567776653 3456899999999888654 4345556667899999999999986531 11223322
Q ss_pred HHHHHHH------HcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhH
Q 018916 108 QIAEVLN------HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (349)
Q Consensus 108 ~l~~~l~------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
.+..+.+ .++.++++++||||||.+++.++.++|+ ++++|++++...
T Consensus 106 ~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~-------------------------- 158 (262)
T 1jfr_A 106 ALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT-------------------------- 158 (262)
T ss_dssp HHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------
T ss_pred HHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc--------------------------
Confidence 2233322 4556789999999999999999999998 999999887421
Q ss_pred HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hh
Q 018916 182 KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 259 (349)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~ 259 (349)
...+.++++|+++++|++|.++ ..
T Consensus 159 ------------------------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~ 184 (262)
T 1jfr_A 159 ------------------------------------------------------DKTWPELRTPTLVVGADGDTVAPVAT 184 (262)
T ss_dssp ------------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTT
T ss_pred ------------------------------------------------------cccccccCCCEEEEecCccccCCchh
Confidence 1224466899999999999998 45
Q ss_pred -HHHHHHHhcc-cceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 260 -AVHMTSKIDR-RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 260 -~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+.+.+.+++ .+.++++++++||..+.++++++.+.|.+||+++-
T Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 185 HSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFI 231 (262)
T ss_dssp THHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHh
Confidence 7888888875 34699999999999999999999999999998763
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-23 Score=186.71 Aligned_cols=231 Identities=13% Similarity=0.082 Sum_probs=162.1
Q ss_pred CCCCceeEEeCCCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 17 PPSGKDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 17 ~~~~~~~~i~~~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
....++..+..+|.++.+..+.+. ..|+||++||++++...++ .....++.+||.|+++|+||+|.|..
T Consensus 124 ~~~~~~v~~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~------~~~~~l~~~G~~v~~~d~rG~G~s~~-- 195 (386)
T 2jbw_A 124 SPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESF------QMENLVLDRGMATATFDGPGQGEMFE-- 195 (386)
T ss_dssp SSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTH------HHHHHHHHTTCEEEEECCTTSGGGTT--
T ss_pred CCCeEEEEEEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHH------HHHHHHHhCCCEEEEECCCCCCCCCC--
Confidence 344566777778889988777543 4578999999987764422 33457778899999999999998731
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH---cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNH---FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
......++++.+.++.+++.. ++.++++++|||+||.+++.++.+ |++++++|++ +.........
T Consensus 196 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~--------- 263 (386)
T 2jbw_A 196 -YKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD--------- 263 (386)
T ss_dssp -TCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG---------
T ss_pred -CCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH---------
Confidence 223357888889999999887 566889999999999999999998 8899999999 7655432211
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
.+...... .....+.. . ...+.. ...+.. .+....+.++++|+|+++
T Consensus 264 -----~~~~~~~~-~~~~~~g~-~-------~~~~~~---------------~~~~~~----~~~~~~~~~i~~P~Lii~ 310 (386)
T 2jbw_A 264 -----LETPLTKE-SWKYVSKV-D-------TLEEAR---------------LHVHAA----LETRDVLSQIACPTYILH 310 (386)
T ss_dssp -----GSCHHHHH-HHHHHTTC-S-------SHHHHH---------------HHHHHH----TCCTTTGGGCCSCEEEEE
T ss_pred -----hccHHHHH-HHHHHhCC-C-------CHHHHH---------------HHHHHh----CChhhhhcccCCCEEEEE
Confidence 00000100 11111111 0 001100 011111 233456778899999999
Q ss_pred eCCCccc--hhHHHHHHHh-cccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKI-DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|++|. + ...+.+.+.+ +. +.++++++++||.. .++++++.+.|.+||++.
T Consensus 311 G~~D~-v~~~~~~~l~~~l~~~-~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 363 (386)
T 2jbw_A 311 GVHDE-VPLSFVDTVLELVPAE-HLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDV 363 (386)
T ss_dssp ETTSS-SCTHHHHHHHHHSCGG-GEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHH
T ss_pred CCCCC-CCHHHHHHHHHHhcCC-CcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHh
Confidence 99999 7 6777888888 62 49999999999965 678999999999999986
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=173.45 Aligned_cols=179 Identities=15% Similarity=0.115 Sum_probs=129.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
++|+|||+||++++... . ..|...+...+.+ ||+|+++|+||++. . ++++++..+++.++.
T Consensus 3 ~~p~vv~lHG~~~~~~~--~-~~~~~~~~~~l~~~~g~~vi~~d~~g~~~-----------~---~~~~~~~~~~~~l~~ 65 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVT--T-HGWYGWVKKELEKIPGFQCLAKNMPDPIT-----------A---RESIWLPFMETELHC 65 (194)
T ss_dssp CCCEEEEECCSSSSCTT--T-STTHHHHHHHHTTSTTCCEEECCCSSTTT-----------C---CHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCCCCCcc--c-chHHHHHHHHHhhccCceEEEeeCCCCCc-----------c---cHHHHHHHHHHHhCc
Confidence 56899999999887310 0 1133322344444 99999999999731 1 246777888889988
Q ss_pred -CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccC
Q 018916 119 -GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197 (349)
Q Consensus 119 -~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
++++++||||||.+++.+|.++| |+++|++++......... .....++.. .
T Consensus 66 ~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~----------------------~~~~~~~~~-~--- 117 (194)
T 2qs9_A 66 DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN----------------------ERASGYFTR-P--- 117 (194)
T ss_dssp CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH----------------------HHHTSTTSS-C---
T ss_pred CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh----------------------hHHHhhhcc-c---
Confidence 89999999999999999999998 999999999765321100 000111111 0
Q ss_pred CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEE
Q 018916 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV 275 (349)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~ 275 (349)
. ..+.+.++.+|+++++|++|.++ +..+.+.+.+ + .+++
T Consensus 118 -----~-------------------------------~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~--~~~~ 158 (194)
T 2qs9_A 118 -----W-------------------------------QWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E--TKLH 158 (194)
T ss_dssp -----C-------------------------------CHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T--CEEE
T ss_pred -----c-------------------------------cHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C--CeEE
Confidence 0 01112334679999999999998 5667788888 6 8999
Q ss_pred EEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 276 EVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 276 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+++++||+++.++|+.+++.+ +||++..
T Consensus 159 ~~~~~gH~~~~~~p~~~~~~~-~fl~~~~ 186 (194)
T 2qs9_A 159 KFTDCGHFQNTEFHELITVVK-SLLKVPA 186 (194)
T ss_dssp EESSCTTSCSSCCHHHHHHHH-HHHTCCC
T ss_pred EeCCCCCccchhCHHHHHHHH-HHHHhhh
Confidence 999999999999999998876 9998763
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-23 Score=171.67 Aligned_cols=201 Identities=13% Similarity=0.094 Sum_probs=141.6
Q ss_pred CCCceeEEeCCCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
...+...+.+.++.+.+..+.+. .+|+|||+||++..+...... .|......+.++||.|+++|+||+|.|...
T Consensus 8 ~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 86 (220)
T 2fuk_A 8 TESAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNK-VVTMAARALRELGITVVRFNFRSVGTSAGS 86 (220)
T ss_dssp SSCEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCH-HHHHHHHHHHTTTCEEEEECCTTSTTCCSC
T ss_pred ccceEEEEeCCCCeEEEEEEeCCCCCccccCEEEEECCCCCcCCcccch-HHHHHHHHHHHCCCeEEEEecCCCCCCCCC
Confidence 34566777777778877665442 267999999965332221111 133444566677999999999999988743
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
.. ......+++.+.+..+.+..+.++++++|||+||.+++.++.++ +++++|++++......
T Consensus 87 ~~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~-------------- 148 (220)
T 2fuk_A 87 FD--HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD-------------- 148 (220)
T ss_dssp CC--TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC--------------
T ss_pred cc--cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh--------------
Confidence 21 11122333333333333444556899999999999999999988 8999999998765421
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
+ .+ + ...+|+++++|+
T Consensus 149 -----------------~------------------------------------------~~----~-~~~~p~l~i~g~ 164 (220)
T 2fuk_A 149 -----------------F------------------------------------------SD----V-QPPAQWLVIQGD 164 (220)
T ss_dssp -----------------C------------------------------------------TT----C-CCCSSEEEEEET
T ss_pred -----------------h------------------------------------------hh----c-ccCCcEEEEECC
Confidence 0 00 0 115789999999
Q ss_pred CCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 253 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|.++ +..+.+.+.+. .+.++++++++||..+. +++++.+.+.+|+++.
T Consensus 165 ~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~ 215 (220)
T 2fuk_A 165 ADEIVDPQAVYDWLETLE-QQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRW 215 (220)
T ss_dssp TCSSSCHHHHHHHHTTCS-SCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGG
T ss_pred CCcccCHHHHHHHHHHhC-cCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHH
Confidence 99998 56667777773 24999999999999887 5889999999999875
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-26 Score=188.55 Aligned_cols=226 Identities=14% Similarity=0.149 Sum_probs=131.7
Q ss_pred ccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Q 018916 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (349)
Q Consensus 37 ~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (349)
...+.+++|||+||+++++.. |... ...+.++|+|+++|+||||.|..+ ..+++.+.+.++++.+
T Consensus 8 ~~~~~~~~lv~lhg~g~~~~~------~~~~-~~~L~~~~~vi~~Dl~GhG~S~~~--------~~~~~~~~~~~~~~~l 72 (242)
T 2k2q_B 8 FDASEKTQLICFPFAGGYSAS------FRPL-HAFLQGECEMLAAEPPGHGTNQTS--------AIEDLEELTDLYKQEL 72 (242)
T ss_dssp CSTTCCCEEESSCCCCHHHHH------HHHH-HHHHCCSCCCEEEECCSSCCSCCC--------TTTHHHHHHHHTTTTC
T ss_pred CCCCCCceEEEECCCCCCHHH------HHHH-HHhCCCCeEEEEEeCCCCCCCCCC--------CcCCHHHHHHHHHHHH
Confidence 344577899999999988755 4333 456677899999999999998631 2345555555666666
Q ss_pred CC---CcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhc
Q 018916 117 GL---GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF 190 (349)
Q Consensus 117 ~~---~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (349)
+. ++++|+||||||.+|+.+|.++++ ..+++++.+.......... . ..... ......+.
T Consensus 73 ~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~-~-----------~~~~~---~~~~~~~~ 137 (242)
T 2k2q_B 73 NLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKK-V-----------SHLPD---DQFLDHII 137 (242)
T ss_dssp CCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCC-C-----------SSCTT---HHHHHTTC
T ss_pred HhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCccc-c-----------cCCCH---HHHHHHHH
Confidence 65 689999999999999999987431 1234444332111100000 0 00000 00111111
Q ss_pred ccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-hhHHHHHHHhcc
Q 018916 191 SKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDR 269 (349)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~ 269 (349)
.. ... ..+.... ..........+...+..... .+.. .+.++++|+++|+|++|.++ .....+.+..++
T Consensus 138 ~~-~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~ 206 (242)
T 2k2q_B 138 QL-GGM------PAELVEN--KEVMSFFLPSFRSDYRALEQ-FELY-DLAQIQSPVHVFNGLDDKKCIRDAEGWKKWAKD 206 (242)
T ss_dssp CT-TCC------CCTTTHH--HHTTTTCCSCHHHHHHHHTC-CCCS-CCTTCCCSEEEEEECSSCCHHHHHHHHHTTCCC
T ss_pred Hh-CCC------ChHHhcC--HHHHHHHHHHHHHHHHHHHh-cccC-CCCccCCCEEEEeeCCCCcCHHHHHHHHHHhcC
Confidence 10 000 0000000 00000011112222222222 1221 26789999999999999987 333444444554
Q ss_pred cceeEEEEcCCCCcccccChhhHHHHHHHHHhhcccc
Q 018916 270 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 306 (349)
Q Consensus 270 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 306 (349)
.++++++ +||++++|+|+++++.|.+||++....
T Consensus 207 --~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~~ 240 (242)
T 2k2q_B 207 --ITFHQFD-GGHMFLLSQTEEVAERIFAILNQHPII 240 (242)
T ss_dssp --SEEEEEE-CCCSHHHHHCHHHHHHHHHHHHTTTSC
T ss_pred --CeEEEEe-CCceeEcCCHHHHHHHHHHHhhccCcc
Confidence 6688887 699999999999999999999876543
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=171.46 Aligned_cols=172 Identities=12% Similarity=0.046 Sum_probs=134.4
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (349)
..+|+|||+||++++...+.. ......+.++||.|+++|+||+|.|... ....++.+.++++.+.++... .
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~g~g~s~~~----~~~~~~~~~~~~~~~~~~~~~~~ 73 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKV----TALAEVAERLGWTHERPDFTDLDARRDL----GQLGDVRGRLQRLLEIARAATEK 73 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHH----HHHHHHHHHTTCEEECCCCHHHHTCGGG----CTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCccHHHH----HHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHhcCCC
Confidence 357899999999877644221 1333455567999999999999988632 234677888888888776654 5
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGN 198 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
++++++|||+||.+++.++.++| +++++++++....... .
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------------~------ 113 (176)
T 2qjw_A 74 GPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------------P------ 113 (176)
T ss_dssp SCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB--------------------------------C------
T ss_pred CCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc--------------------------------C------
Confidence 79999999999999999999998 9999999987553210 0
Q ss_pred CCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEE
Q 018916 199 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 276 (349)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~ 276 (349)
. +..+++|+++++|++|.++ ...+.+.+.+ + .++++
T Consensus 114 ----~-----------------------------------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--~~~~~ 151 (176)
T 2qjw_A 114 ----A-----------------------------------LDAAAVPISIVHAWHDELIPAADVIAWAQAR-S--ARLLL 151 (176)
T ss_dssp ----C-----------------------------------CCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-T--CEEEE
T ss_pred ----c-----------------------------------ccccCCCEEEEEcCCCCccCHHHHHHHHHhC-C--ceEEE
Confidence 0 3467899999999999998 5666677776 4 88999
Q ss_pred EcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 277 VQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 277 i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+ ++||.. .++++++.+.|.+||+++
T Consensus 152 ~-~~~H~~-~~~~~~~~~~i~~fl~~l 176 (176)
T 2qjw_A 152 V-DDGHRL-GAHVQAASRAFAELLQSL 176 (176)
T ss_dssp E-SSCTTC-TTCHHHHHHHHHHHHHTC
T ss_pred e-CCCccc-cccHHHHHHHHHHHHHhC
Confidence 9 899997 488999999999999863
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-23 Score=181.23 Aligned_cols=234 Identities=12% Similarity=0.108 Sum_probs=151.4
Q ss_pred ceeEEeC-CCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-
Q 018916 21 KDNLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD- 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~- 95 (349)
+...+.. +|.++++..+.+ +..|+||++||++++... |... ..++++||.|+++|+||+|.|..+...
T Consensus 83 ~~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~------~~~~-~~~~~~G~~v~~~D~rG~g~s~~~~~~~ 155 (346)
T 3fcy_A 83 YDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGD------WNDK-LNYVAAGFTVVAMDVRGQGGQSQDVGGV 155 (346)
T ss_dssp EEEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCC------SGGG-HHHHTTTCEEEEECCTTSSSSCCCCCCC
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCC------hhhh-hHHHhCCcEEEEEcCCCCCCCCCCCccc
Confidence 3444444 566788877643 356899999999887644 3222 367789999999999999987643211
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 96 ---------------DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 96 ---------------~~~~~~~~~~~~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
....+.+..+.+|+..+++.+ +.++++++|||+||.+|+.+|.++|+ |+++++++|..
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~ 234 (346)
T 3fcy_A 156 TGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFL 234 (346)
T ss_dssp SSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSS
T ss_pred CCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcc
Confidence 122344556666666665443 33689999999999999999999998 99999998865
Q ss_pred CCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCC
Q 018916 155 KAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPD 234 (349)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (349)
.. ..... ......... . ....++.. .... ..........+.. .+
T Consensus 235 ~~--~~~~~---------~~~~~~~~~-~-~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~-~d 278 (346)
T 3fcy_A 235 SD--YKRVW---------DLDLAKNAY-Q-EITDYFRL---------------------FDPR-HERENEVFTKLGY-ID 278 (346)
T ss_dssp CC--HHHHH---------HTTCCCGGG-H-HHHHHHHH---------------------HCTT-CTTHHHHHHHHGG-GC
T ss_pred cC--HHHHh---------hccccccch-H-HHHHHHHh---------------------cCCC-cchHHHHHHHhCc-cc
Confidence 42 11100 000000000 0 00111110 0000 0001111111111 34
Q ss_pred hhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 235 ISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 235 ~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
....+.++++|+|+++|++|.++ .....+.+.+++ ++++++++++||..+ +++.+.+.+||+++
T Consensus 279 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 279 VKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVYPDYGHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp HHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEETTCCSSCC----TTHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEeCCCCCcCH----HHHHHHHHHHHHHh
Confidence 55667889999999999999998 555667777774 589999999999987 67889999999875
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-23 Score=175.69 Aligned_cols=217 Identities=9% Similarity=0.031 Sum_probs=140.5
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (349)
+.+++|||+||++++... |... .. +..+|+|+++|+||+|.+.. ..++++++++++.++++.+. .
T Consensus 19 ~~~~~lv~lhg~~~~~~~------~~~~-~~-l~~~~~v~~~d~~G~~~~~~------~~~~~~~~~~~~~~~i~~~~~~ 84 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFS------YASL-PR-LKSDTAVVGLNCPYARDPEN------MNCTHGAMIESFCNEIRRRQPR 84 (265)
T ss_dssp TSSEEEEEECCTTCCGGG------GTTS-CC-CSSSEEEEEEECTTTTCGGG------CCCCHHHHHHHHHHHHHHHCSS
T ss_pred CCCCEEEEECCCCCCHHH------HHHH-Hh-cCCCCEEEEEECCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999988755 3233 34 68899999999999976542 24799999999999999885 4
Q ss_pred CcEEEEEechhHHHHHHHHH---hhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccc
Q 018916 119 GAVMCMGVTAGAYILTLFAM---KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV 195 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
++++|+||||||.+|+++|. .+++++.++|++++......... . .... .+..........
T Consensus 85 ~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~-~--~~~~--------------~~~~~~~~~~~~ 147 (265)
T 3ils_A 85 GPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQL-P--RAFY--------------EHCNSIGLFATQ 147 (265)
T ss_dssp CCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCC-C--HHHH--------------HHHHHTTTTTTS
T ss_pred CCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccccc-C--HHHH--------------HHHHHHHHhCCC
Confidence 68999999999999999998 56677999999998754321100 0 0000 011111110000
Q ss_pred ----cCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceE-EEEeCC---Cccch---------
Q 018916 196 ----RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL-IFVGES---SPFHS--------- 258 (349)
Q Consensus 196 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl-ii~g~~---D~~~~--------- 258 (349)
..............++ ..+.....+ . ......+++|++ +++|++ |..++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~ 213 (265)
T 3ils_A 148 PGASPDGSTEPPSYLIPHFT------------AVVDVMLDY-K-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFM 213 (265)
T ss_dssp SSSCSSSCSCCCTTHHHHHH------------HHHHHTTTC-C-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTT
T ss_pred ccccccCCHHHHHHHHHHHH------------HHHHHHHhc-C-CCCCccCCCCeEEEEEccCCCCccccCccccCcchh
Confidence 0000000111111111 112222221 1 122347899988 999999 88651
Q ss_pred -------hHHHHHHHhcccceeEEEEcCCCCccc--ccChhhHHHHHHHHHh
Q 018916 259 -------EAVHMTSKIDRRYSALVEVQACGSMVT--EEQPHAMLIPMEYFLM 301 (349)
Q Consensus 259 -------~~~~~~~~~~~~~~~~~~i~~~gH~~~--~e~p~~~~~~i~~fl~ 301 (349)
....+.+..+..+.++++++++||+.+ .|+++++++.|.+||+
T Consensus 214 ~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 214 IQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp TSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred hccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 123355555523599999999999999 8999999999999973
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.6e-24 Score=169.31 Aligned_cols=178 Identities=15% Similarity=0.146 Sum_probs=132.6
Q ss_pred CCCeEEEecCCCCChh-hhhcccccchhhhh-hhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 41 DKPALVTYPDLALNYM-SCFQGLFFCPEACS-LLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~-~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
+.|+|||+||++++.. . |...+.. +.++||+|+++|+|. +.. .+++++++++.++++.+ .
T Consensus 3 g~p~vv~~HG~~~~~~~~------~~~~~~~~l~~~g~~v~~~d~~~---~~~--------~~~~~~~~~~~~~~~~~-~ 64 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNH------WFPWLKKRLLADGVQADILNMPN---PLQ--------PRLEDWLDTLSLYQHTL-H 64 (192)
T ss_dssp -CCEEEEECCTTCCTTST------THHHHHHHHHHTTCEEEEECCSC---TTS--------CCHHHHHHHHHTTGGGC-C
T ss_pred CCCEEEEEcCCCCCcchh------HHHHHHHHHHhCCcEEEEecCCC---CCC--------CCHHHHHHHHHHHHHhc-c
Confidence 3467999999998875 3 4344444 447899999999992 321 27899999999999888 7
Q ss_pred CcEEEEEechhHHHHHHHHHhhhc--ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccccccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVR 196 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
++++++||||||.+++.+|.++|+ +++++|++++....... +.. ...++..
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----------------~~~------~~~~~~~---- 117 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT-----------------LQM------LDEFTQG---- 117 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----------------CGG------GGGGTCS----
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc-----------------chh------hhhhhhc----
Confidence 899999999999999999999999 99999999987654210 000 0001110
Q ss_pred CCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeE
Q 018916 197 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL 274 (349)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~ 274 (349)
. .+. ..+.++++|+++++|++|.++ +..+.+.+.+ + .++
T Consensus 118 ------~-----------------------------~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--~~~ 158 (192)
T 1uxo_A 118 ------S-----------------------------FDH-QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D--AAL 158 (192)
T ss_dssp ------C-----------------------------CCH-HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T--CEE
T ss_pred ------C-----------------------------CCH-HHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C--ceE
Confidence 0 111 334566789999999999998 5667788888 5 899
Q ss_pred EEEcCCCCcccccChhhH---HHHHHHHHhh
Q 018916 275 VEVQACGSMVTEEQPHAM---LIPMEYFLMG 302 (349)
Q Consensus 275 ~~i~~~gH~~~~e~p~~~---~~~i~~fl~~ 302 (349)
++++++||+.+.++++++ .+.|.+|+++
T Consensus 159 ~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 159 YEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp EEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred EEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 999999999999988655 6666666654
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=172.26 Aligned_cols=196 Identities=11% Similarity=0.042 Sum_probs=146.6
Q ss_pred eEEeC-CCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC---
Q 018916 23 NLIKT-SHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD--- 96 (349)
Q Consensus 23 ~~i~~-~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~--- 96 (349)
..+.+ +|..+.+..+.+. ..|+||++||++++... |......+.++||.|+++|+||+|.|.......
T Consensus 6 ~~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 79 (236)
T 1zi8_A 6 ISIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAF------MRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (236)
T ss_dssp CCEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHH------HHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHH
T ss_pred EEEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHH------HHHHHHHHHhCCcEEEeccccccCCCcccccccchh
Confidence 34554 5566887777654 35789999999877643 334445666779999999999999875321111
Q ss_pred --------CCCCCHHHHHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh
Q 018916 97 --------EPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (349)
Q Consensus 97 --------~~~~~~~~~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (349)
....+.++.++|+.++++.+. .++++++|||+||.+++.++.++| +++++++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-------
T ss_pred hhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-------
Confidence 123577888899999998876 468999999999999999999998 8888887762100
Q ss_pred hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC
Q 018916 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 243 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (349)
+....+.+++
T Consensus 151 ----------------------------------------------------------------------~~~~~~~~~~ 160 (236)
T 1zi8_A 151 ----------------------------------------------------------------------KQLNKVPEVK 160 (236)
T ss_dssp ----------------------------------------------------------------------GCGGGGGGCC
T ss_pred ----------------------------------------------------------------------cchhhhhhcC
Confidence 0123455678
Q ss_pred CceEEEEeCCCccc--hhHHHHHHHhcc-cceeEEEEcCCCCcccccCh--------hhHHHHHHHHHhhc
Q 018916 244 CRSLIFVGESSPFH--SEAVHMTSKIDR-RYSALVEVQACGSMVTEEQP--------HAMLIPMEYFLMGY 303 (349)
Q Consensus 244 ~Pvlii~g~~D~~~--~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 303 (349)
+|+++++|++|.++ +..+.+.+.+.. .+.++++++++||....+.+ +++.+.+.+||++.
T Consensus 161 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 231 (236)
T 1zi8_A 161 HPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPL 231 (236)
T ss_dssp SCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999998 566778887743 25999999999998877654 46889999999876
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-22 Score=172.82 Aligned_cols=215 Identities=15% Similarity=0.122 Sum_probs=142.1
Q ss_pred EccCCCCCeEEEecCC--CCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 018916 36 IYGDQDKPALVTYPDL--ALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL 113 (349)
Q Consensus 36 ~~g~~~~p~vv~lHG~--~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l 113 (349)
....+++|+|||+||+ +.+... |... ...+..+|+|+++|+||||.+.. ...+++++++++.+++
T Consensus 75 l~~~~~~~~lv~lhG~~~~~~~~~------~~~~-~~~L~~~~~v~~~d~~G~G~~~~------~~~~~~~~~~~~~~~l 141 (319)
T 3lcr_A 75 LGRGQLGPQLILVCPTVMTTGPQV------YSRL-AEELDAGRRVSALVPPGFHGGQA------LPATLTVLVRSLADVV 141 (319)
T ss_dssp ESSCCSSCEEEEECCSSTTCSGGG------GHHH-HHHHCTTSEEEEEECTTSSTTCC------EESSHHHHHHHHHHHH
T ss_pred ecCCCCCCeEEEECCCCcCCCHHH------HHHH-HHHhCCCceEEEeeCCCCCCCCC------CCCCHHHHHHHHHHHH
Confidence 3334578999999996 333322 4333 45568899999999999997652 2358999999999988
Q ss_pred HHc-CCCcEEEEEechhHHHHHHHHHhh---hcccceeEEecCCCCCCC--hhHHhhhhhhhHHHHhcCcchhHHHHHHH
Q 018916 114 NHF-GLGAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (349)
Q Consensus 114 ~~l-~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
+.+ +.++++|+||||||.+|+.+|.++ |++|+++|++++...... ...... ..+. .....
T Consensus 142 ~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~ 207 (319)
T 3lcr_A 142 QAEVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELF-RSAL-------------NERFV 207 (319)
T ss_dssp HHHHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHH-HHHH-------------HHHHH
T ss_pred HHhcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHH-HHHH-------------HHHHh
Confidence 766 568999999999999999999998 778999999998776543 111110 0000 00000
Q ss_pred hhcccccccCCCCCCc--hHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-hhHHHHH
Q 018916 188 RYFSKQEVRGNAQVPE--SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMT 264 (349)
Q Consensus 188 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~ 264 (349)
... .+.. .. ......+ ...+..+..+ ....+++|+|+|+|++|.+. .....+.
T Consensus 208 ~~~---~~~~----~~~~~~~l~~~------------~~~~~~~~~~-----~~~~i~~PvLli~g~~~~~~~~~~~~~~ 263 (319)
T 3lcr_A 208 EYL---RLTG----GGNLSQRITAQ------------VWCLELLRGW-----RPEGLTAPTLYVRPAQPLVEQEKPEWRG 263 (319)
T ss_dssp HHH---HHHC----CCCHHHHHHHH------------HHHHHHTTTC-----CCCCCSSCEEEEEESSCSSSCCCTHHHH
T ss_pred hhh---cccC----CCchhHHHHHH------------HHHHHHHhcC-----CCCCcCCCEEEEEeCCCCCCcccchhhh
Confidence 000 0000 01 1111111 1112222221 12578999999999996554 5556666
Q ss_pred HHhcccceeEEEEcCCCCccccc--ChhhHHHHHHHHHhhc
Q 018916 265 SKIDRRYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 265 ~~~~~~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~~ 303 (349)
+.+++ ..+++.++ ++|+.+++ +++++++.|.+||++.
T Consensus 264 ~~~~~-~~~~~~~~-g~H~~~~~~~~~~~va~~i~~fL~~~ 302 (319)
T 3lcr_A 264 DVLAA-MGQVVEAP-GDHFTIIEGEHVASTAHIVGDWLREA 302 (319)
T ss_dssp HHHHT-CSEEEEES-SCTTGGGSTTTHHHHHHHHHHHHHHH
T ss_pred hcCCC-CceEEEeC-CCcHHhhCcccHHHHHHHHHHHHHhc
Confidence 66664 36777776 68888886 9999999999999986
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-24 Score=175.52 Aligned_cols=194 Identities=13% Similarity=0.173 Sum_probs=138.2
Q ss_pred CceeEEeCCCeeEEEEEccC-CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEE--CCCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI--NPPGHEFGAAAISDD 96 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~-~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~--D~~G~G~s~~~~~~~ 96 (349)
.++.++..++..++|...|+ +..|+|||+||++++... |... ...+..||.|+++ |++|+|.|.......
T Consensus 15 ~~e~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~------~~~~-~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~ 87 (226)
T 2h1i_A 15 TENLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNELD------LLPL-AEIVDSEASVLSVRGNVLENGMPRFFRRLA 87 (226)
T ss_dssp CCCHHHHHHSSSCEEEECCSCTTSCEEEEECCTTCCTTT------THHH-HHHHHTTSCEEEECCSEEETTEEESSCEEE
T ss_pred ceeeeecCCCceeEEecCCCCCCCcEEEEEecCCCChhH------HHHH-HHHhccCceEEEecCcccCCcchhhccccC
Confidence 45566677888899998886 578999999999987644 3233 3445559999999 999999764211111
Q ss_pred CCCCCHHHHHHHHHHHH-------HHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh
Q 018916 97 EPVLSVDDLADQIAEVL-------NHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l-------~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
...++.+++.+++.+++ +.. +.++++++|||+||.+++.++.++|+++++++++++......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------- 158 (226)
T 2h1i_A 88 EGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------- 158 (226)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------
T ss_pred ccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------
Confidence 12345565555443333 344 448999999999999999999999999999999998754321
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceE
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 247 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 247 (349)
. .....+++|++
T Consensus 159 ------------------------~--------------------------------------------~~~~~~~~p~l 170 (226)
T 2h1i_A 159 ------------------------M--------------------------------------------QLANLAGKSVF 170 (226)
T ss_dssp ------------------------C--------------------------------------------CCCCCTTCEEE
T ss_pred ------------------------c--------------------------------------------ccccccCCcEE
Confidence 0 00123478999
Q ss_pred EEEeCCCccc--hhHHHHHHHhcccc--eeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+++|++|.++ ...+.+.+.++..+ .++ +++++||..+.+ ..+.+.+||++
T Consensus 171 ~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~----~~~~~~~~l~~ 224 (226)
T 2h1i_A 171 IAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMG----EVEKAKEWYDK 224 (226)
T ss_dssp EEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHH----HHHHHHHHHHH
T ss_pred EEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHH----HHHHHHHHHHH
Confidence 9999999998 46777888887533 555 999999998644 44566666654
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=166.85 Aligned_cols=166 Identities=16% Similarity=0.130 Sum_probs=129.2
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
.+|+|||+||++++.... |.......+. .++.+|++|++ .++++++++++.++++.++ ++
T Consensus 16 ~~~~vv~~HG~~~~~~~~-----~~~~~~~~~~---~~~~v~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~ 75 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEH-----WQSHWERRFP---HWQRIRQREWY-----------QADLDRWVLAIRRELSVCT-QP 75 (191)
T ss_dssp TTCEEEEECCTTCCCTTS-----HHHHHHHHCT---TSEECCCSCCS-----------SCCHHHHHHHHHHHHHTCS-SC
T ss_pred CCceEEEECCCCCCchhh-----HHHHHHHhcC---CeEEEeccCCC-----------CcCHHHHHHHHHHHHHhcC-CC
Confidence 678999999998776331 3233233333 34677888874 2689999999999999988 89
Q ss_pred EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCC
Q 018916 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQ 200 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
++++||||||.+++.+|.++|++++++|++++...... .+..
T Consensus 76 ~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~------------------------------~~~~-------- 117 (191)
T 3bdv_A 76 VILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF------------------------------EIDD-------- 117 (191)
T ss_dssp EEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG------------------------------TCTT--------
T ss_pred eEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc------------------------------cCcc--------
Confidence 99999999999999999999999999999998754210 0000
Q ss_pred CCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEc
Q 018916 201 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQ 278 (349)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~ 278 (349)
. ..+.++++|+++++|++|.++ +..+.+.+.+ + .++++++
T Consensus 118 --~---------------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~--~~~~~~~ 159 (191)
T 3bdv_A 118 --R---------------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-D--SELVDVG 159 (191)
T ss_dssp --T---------------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-T--CEEEECC
T ss_pred --c---------------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-C--CcEEEeC
Confidence 0 235678899999999999998 4566677776 4 8999999
Q ss_pred CCCCcccc----cChhhHHHHHHHHHhhc
Q 018916 279 ACGSMVTE----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 279 ~~gH~~~~----e~p~~~~~~i~~fl~~~ 303 (349)
++||+.+. +.|+.+ +.|.+||+++
T Consensus 160 ~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 160 EAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp SCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred CCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 99999988 445555 9999999876
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=179.88 Aligned_cols=212 Identities=15% Similarity=0.102 Sum_probs=139.8
Q ss_pred CCCCCeEEEecCCCCCh--hhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHH
Q 018916 39 DQDKPALVTYPDLALNY--MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE-VLNH 115 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~-~l~~ 115 (349)
.+.+|+|||+||++.+. .. |... ...+..+|+|+++|+||||.|.. ..++++++++++.+ +++.
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~------~~~~-~~~l~~~~~v~~~d~~G~G~s~~------~~~~~~~~a~~~~~~l~~~ 130 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHE------FTRL-AGALRGIAPVRAVPQPGYEEGEP------LPSSMAAVAAVQADAVIRT 130 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTT------THHH-HHHTSSSCCBCCCCCTTSSTTCC------BCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCcccCcHHH------HHHH-HHhcCCCceEEEecCCCCCCCCC------CCCCHHHHHHHHHHHHHHh
Confidence 34678999999998765 33 4233 45566789999999999998752 24799999999884 6678
Q ss_pred cCCCcEEEEEechhHHHHHHHHHhhh---cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccc
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (349)
++.++++|+||||||.+|+.+|.++| ++|+++|++++........ . ..+ . ..+...++..
T Consensus 131 ~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~--~------~~~--------~-~~~~~~~~~~ 193 (300)
T 1kez_A 131 QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA--M------NAW--------L-EELTATLFDR 193 (300)
T ss_dssp CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH--H------HHH--------H-HHHHGGGCCC
T ss_pred cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH--H------HHH--------H-HHHHHHHHhC
Confidence 88899999999999999999999988 4899999999876543310 0 000 0 0112222222
Q ss_pred ccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccce
Q 018916 193 QEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYS 272 (349)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~ 272 (349)
.. . ........ .+..+...+.. + ...++++|+++|+|++|.+......+.+.+++ +.
T Consensus 194 ~~-~----~~~~~~~~------------~~~~~~~~~~~---~--~~~~i~~P~lii~G~d~~~~~~~~~~~~~~~~-~~ 250 (300)
T 1kez_A 194 ET-V----RMDDTRLT------------ALGAYDRLTGQ---W--RPRETGLPTLLVSAGEPMGPWPDDSWKPTWPF-EH 250 (300)
T ss_dssp CS-S----CCCHHHHH------------HHHHHHHHTTT---C--CCCCCSCCBEEEEESSCSSCCCSSCCSCCCSS-CC
T ss_pred cC-C----ccchHHHH------------HHHHHHHHHhc---C--CCCCCCCCEEEEEeCCCCCCCcccchhhhcCC-CC
Confidence 00 0 00111111 01111111111 1 24678999999999644333222223333332 37
Q ss_pred eEEEEcCCCCcccc-cChhhHHHHHHHHHhhcc
Q 018916 273 ALVEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 273 ~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 304 (349)
+++++++ ||+.++ ++++++++.|.+||++..
T Consensus 251 ~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 251 DTVAVPG-DHFTMVQEHADAIARHIDAWLGGGN 282 (300)
T ss_dssp EEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC-
T ss_pred eEEEecC-CChhhccccHHHHHHHHHHHHHhcc
Confidence 8999998 999997 999999999999998763
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-22 Score=166.35 Aligned_cols=206 Identities=8% Similarity=-0.017 Sum_probs=142.6
Q ss_pred ceeEEeCCCeeEEEEEccCC----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD- 95 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~- 95 (349)
+...+.+++..+.+..+.+. ..|+||++||++++... |......+.++||.|+++|++|+|.+......
T Consensus 7 ~~~~~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~------~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~ 80 (241)
T 3f67_A 7 GETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEH------IRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDI 80 (241)
T ss_dssp EEEEEEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHH------HHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSH
T ss_pred eeEEEecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCHH------HHHHHHHHHHCCcEEEEecccccCCCCCchhhH
Confidence 44556667888877666543 24799999998877543 33444566688999999999999766532110
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh
Q 018916 96 ------DEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (349)
Q Consensus 96 ------~~~~~~~~~~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (349)
.....+.++..+|+.++++.+. .++++++|||+||.+++.++.++|+ +.+++++.+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~------ 153 (241)
T 3f67_A 81 PTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK------ 153 (241)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC------
T ss_pred HHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC------
Confidence 0112345677888888877653 4579999999999999999999987 777776554422110
Q ss_pred hhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC
Q 018916 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 244 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 244 (349)
. ... . .+....+.++++
T Consensus 154 ---------------------------~-~~~------~-----------------------------~~~~~~~~~~~~ 170 (241)
T 3f67_A 154 ---------------------------S-LNS------P-----------------------------KHPVDIAVDLNA 170 (241)
T ss_dssp ---------------------------C-SSS------C-----------------------------CCHHHHGGGCCS
T ss_pred ---------------------------c-cCC------c-----------------------------cCHHHhhhhcCC
Confidence 0 000 0 111233456789
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhcc--cceeEEEEcCCCCccccc--------ChhhHHHHHHHHHhh
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVQACGSMVTEE--------QPHAMLIPMEYFLMG 302 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e--------~p~~~~~~i~~fl~~ 302 (349)
|+++++|++|.++ +..+.+.+.+.. .+.+++++++++|....+ ..+++.+.+.+||++
T Consensus 171 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 171 PVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp CEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999998 566677777742 348999999999987642 345678889999976
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-23 Score=171.49 Aligned_cols=183 Identities=19% Similarity=0.202 Sum_probs=127.6
Q ss_pred EEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEE--CCCCCCCCCCCCCCCCCCCCHHH---HHH
Q 018916 33 SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI--NPPGHEFGAAAISDDEPVLSVDD---LAD 107 (349)
Q Consensus 33 ~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~--D~~G~G~s~~~~~~~~~~~~~~~---~~~ 107 (349)
++...+++..|+|||+||++++... |... ...+.++|.|+++ |++|+|.|..........+...+ .++
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~------~~~~-~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 125 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQ------FFDF-GARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATG 125 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHH------HHHH-HHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHH
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhH------HHHH-HHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHH
Confidence 4445555578999999999988755 3222 3555667999999 89999876421111111234333 344
Q ss_pred HHHHHHHH----cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHH
Q 018916 108 QIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (349)
Q Consensus 108 ~l~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
++.++++. ++.++++++||||||.+++.+|.++|++++++|++++......
T Consensus 126 ~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------- 180 (251)
T 2r8b_A 126 KMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------
T ss_pred HHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------
Confidence 44444443 3889999999999999999999999999999999998764321
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 261 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~ 261 (349)
. .....+++|+++++|++|.++ +..+
T Consensus 181 --------~--------------------------------------------~~~~~~~~P~li~~g~~D~~~~~~~~~ 208 (251)
T 2r8b_A 181 --------K--------------------------------------------ISPAKPTRRVLITAGERDPICPVQLTK 208 (251)
T ss_dssp --------C--------------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHH
T ss_pred --------c--------------------------------------------ccccccCCcEEEeccCCCccCCHHHHH
Confidence 0 011235789999999999997 5677
Q ss_pred HHHHHhcccceeEE-EEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 262 HMTSKIDRRYSALV-EVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 262 ~~~~~~~~~~~~~~-~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+.++..+.++. .++++||..+.+.++ .+.+||++.
T Consensus 209 ~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~l~~~ 247 (251)
T 2r8b_A 209 ALEESLKAQGGTVETVWHPGGHEIRSGEID----AVRGFLAAY 247 (251)
T ss_dssp HHHHHHHHHSSEEEEEEESSCSSCCHHHHH----HHHHHHGGG
T ss_pred HHHHHHHHcCCeEEEEecCCCCccCHHHHH----HHHHHHHHh
Confidence 78888884335554 778899998766654 455566543
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-23 Score=175.69 Aligned_cols=177 Identities=12% Similarity=0.110 Sum_probs=134.3
Q ss_pred eEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
.+++...+ ...|+|||+||++++... |......+.++||.|+++|+||+|.+.. ...+++.+.+.
T Consensus 86 ~~~~p~~~-~~~p~vv~~HG~~~~~~~------~~~~~~~la~~G~~vv~~d~~g~g~s~~--------~~~~d~~~~~~ 150 (306)
T 3vis_A 86 TIYYPREN-NTYGAIAISPGYTGTQSS------IAWLGERIASHGFVVIAIDTNTTLDQPD--------SRARQLNAALD 150 (306)
T ss_dssp EEEEESSC-SCEEEEEEECCTTCCHHH------HHHHHHHHHTTTEEEEEECCSSTTCCHH--------HHHHHHHHHHH
T ss_pred EEEeeCCC-CCCCEEEEeCCCcCCHHH------HHHHHHHHHhCCCEEEEecCCCCCCCcc--------hHHHHHHHHHH
Confidence 34443333 357899999999988755 3344556777899999999999988642 11233333333
Q ss_pred HHHH--------HcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHH
Q 018916 111 EVLN--------HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (349)
Q Consensus 111 ~~l~--------~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (349)
.+.+ .++.++++++|||+||.+++.++.++|+ +++++++++...
T Consensus 151 ~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~--------------------------- 202 (306)
T 3vis_A 151 YMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL--------------------------- 202 (306)
T ss_dssp HHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------------------
T ss_pred HHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC---------------------------
Confidence 3322 2345789999999999999999999987 999999887433
Q ss_pred HHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h-h
Q 018916 183 ELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S-E 259 (349)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~-~ 259 (349)
...+.++++|+++++|++|.++ + .
T Consensus 203 -----------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~ 229 (306)
T 3vis_A 203 -----------------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLH 229 (306)
T ss_dssp -----------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTT
T ss_pred -----------------------------------------------------ccccccCCCCEEEEecCCCcccCcchh
Confidence 1223456799999999999998 3 4
Q ss_pred HHHHHHHhccc-ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 260 AVHMTSKIDRR-YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 260 ~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+.+.+++. ..++++++++||+.+.++++++.+.+.+||++.
T Consensus 230 ~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~ 274 (306)
T 3vis_A 230 SKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVAWLKRF 274 (306)
T ss_dssp HHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHHHHHHH
Confidence 77888888764 478999999999999999999999999999886
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-22 Score=170.30 Aligned_cols=203 Identities=12% Similarity=0.108 Sum_probs=141.5
Q ss_pred EEeC-CCeeEEEEEccC--CCCCeEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 24 LIKT-SHGSLSVTIYGD--QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 24 ~i~~-~~~~l~~~~~g~--~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
.+.. ++..+.+..+.+ +.+|+|||+||.+ ++... |......+.++||+|+++|+||+|.
T Consensus 42 ~i~~~~~~~~~~~~~~p~~~~~p~vv~~HGgg~~~~~~~~------~~~~~~~l~~~G~~v~~~d~~~~~~--------- 106 (262)
T 2pbl_A 42 NLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSS------WSHLAVGALSKGWAVAMPSYELCPE--------- 106 (262)
T ss_dssp EEESSSSTTCEEEEECCSSSCSEEEEEECCSTTTSCCGGG------CGGGGHHHHHTTEEEEEECCCCTTT---------
T ss_pred ccccCCCCCceEEEEccCCCCCCEEEEEcCcccccCChHH------HHHHHHHHHhCCCEEEEeCCCCCCC---------
Confidence 3443 343444444433 4678999999964 33322 4444556667899999999999853
Q ss_pred CCCCHHHHHHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHhh------hcccceeEEecCCCCCCChhHHhhhhhh
Q 018916 98 PVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
.++.++++|+.++++.+.. ++++++||||||.+++.+|.++ |++++++|++++.........
T Consensus 107 --~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~------- 177 (262)
T 2pbl_A 107 --VRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR------- 177 (262)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG-------
T ss_pred --CChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHh-------
Confidence 4678888888888776654 6999999999999999999988 899999999998765321100
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 248 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 248 (349)
..... .+.. ..+.. .. ......+.++++|+++
T Consensus 178 ----------~~~~~-----~~~~----------~~~~~-------------------~~----~~~~~~~~~~~~P~li 209 (262)
T 2pbl_A 178 ----------TSMNE-----KFKM----------DADAA-------------------IA----ESPVEMQNRYDAKVTV 209 (262)
T ss_dssp ----------STTHH-----HHCC----------CHHHH-------------------HH----TCGGGCCCCCSCEEEE
T ss_pred ----------hhhhh-----hhCC----------CHHHH-------------------Hh----cCcccccCCCCCCEEE
Confidence 00000 0000 10000 00 1112234578899999
Q ss_pred EEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 249 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 249 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++|++|.++ +..+.+.+.++ +++++++++||+.+.+++++....+.+++-
T Consensus 210 i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 210 WVGGAERPAFLDQAIWLVEAWD---ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp EEETTSCHHHHHHHHHHHHHHT---CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred EEeCCCCcccHHHHHHHHHHhC---CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 999999977 66777888887 899999999999999999988888887763
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-23 Score=168.51 Aligned_cols=177 Identities=11% Similarity=0.111 Sum_probs=129.0
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEE-------------------CCCCCCCCCCCCCCCCCCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI-------------------NPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~-------------------D~~G~G~s~~~~~~~~~~~ 100 (349)
+.+|+|||+||++.+... |......+..+||.|+++ |++|+ .+. ......
T Consensus 21 ~~~~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~----~~~~~~ 89 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHG------WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPD----SQEDES 89 (232)
T ss_dssp CCSEEEEEECCSSSCHHH------HHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STT----CCBCHH
T ss_pred CCCceEEEEecCCCccch------HHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Ccc----cccccH
Confidence 467899999999988755 333334444569999998 66666 222 112346
Q ss_pred CHHHHHHHHHHHHHHc---CC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 101 SVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
++++.++++.++++.+ +. ++++++|||+||.+++.++.++|++++++|++++.......
T Consensus 90 ~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~---------------- 153 (232)
T 1fj2_A 90 GIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS---------------- 153 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG----------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc----------------
Confidence 7889999999999876 66 79999999999999999999999999999999986542100
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
+ . . ....+..+++|+++++|++|.
T Consensus 154 --------------~-~----------~-------------------------------~~~~~~~~~~P~l~i~G~~D~ 177 (232)
T 1fj2_A 154 --------------F-P----------Q-------------------------------GPIGGANRDISILQCHGDCDP 177 (232)
T ss_dssp --------------S-C----------S-------------------------------SCCCSTTTTCCEEEEEETTCS
T ss_pred --------------c-c----------c-------------------------------cccccccCCCCEEEEecCCCc
Confidence 0 0 0 011245678999999999999
Q ss_pred cc--hhHHHHHHHhcc----cceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 256 FH--SEAVHMTSKIDR----RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++ +..+.+.+.+.. .+.++++++++||..+.+.. +.+.+||++.
T Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~----~~i~~~l~~~ 227 (232)
T 1fj2_A 178 LVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEM----MDVKQFIDKL 227 (232)
T ss_dssp SSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHH----HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHH----HHHHHHHHHh
Confidence 98 456667766642 23899999999999854433 5666666654
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-22 Score=175.16 Aligned_cols=268 Identities=9% Similarity=-0.028 Sum_probs=150.1
Q ss_pred eeEEeCC-CeeEEEEEccC-----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 22 DNLIKTS-HGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 22 ~~~i~~~-~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
...+.+. |..+++..+.+ +..|+||++||++++...+.. .....+.++||.|+++|+||+|.|....
T Consensus 70 ~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~g~g~s~~~~-- 142 (367)
T 2hdw_A 70 KVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSG-----LYAQTMAERGFVTLAFDPSYTGESGGQP-- 142 (367)
T ss_dssp EEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHH-----HHHHHHHHTTCEEEEECCTTSTTSCCSS--
T ss_pred EEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHH-----HHHHHHHHCCCEEEEECCCCcCCCCCcC--
Confidence 3444443 55777665522 345789999999877654322 1335666789999999999999876321
Q ss_pred CCCCCCHHHHHHHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh----h
Q 018916 96 DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY----N 165 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----~ 165 (349)
....+....++|+.++++.+ +.++++++|||+||.+++.+|.++| +++++|+++|............ .
T Consensus 143 -~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~ 220 (367)
T 2hdw_A 143 -RNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTL 220 (367)
T ss_dssp -SSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCH
T ss_pred -ccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccch
Confidence 12234666677776666554 2468999999999999999999998 5999999987521100000000 0
Q ss_pred hhhhHHHHhcCcchhHHHHHHHhhcccc-cccCCCCCCchHHHHHHHHhhhhc---cch-------hHHHHHHHhcCCCC
Q 018916 166 KVMSNLLYYYGMCGVVKELLLKRYFSKQ-EVRGNAQVPESDIVQACRRLLDER---QSS-------NVWHFLEAINGRPD 234 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~ 234 (349)
......+.... .... ..+....+... ..... ..............+... .+. ........+.. .+
T Consensus 221 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 296 (367)
T 2hdw_A 221 EQRTRTLEQLG-QQRW-KDAESGTPAYQPPYNEL-KGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN-MP 296 (367)
T ss_dssp HHHHHHHHHHH-HHHH-HHHHHTSCCBCSCTTCC-CSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT-SC
T ss_pred HHHHHHHHHHH-HHHH-HHhccCCceeecCCCcc-ccccccccCCccceeecccccCcccccccchhhhhhHHHhcC-CC
Confidence 00000000000 0000 00000000000 00000 000112212222211110 000 00001111222 33
Q ss_pred hhhhccccC-CceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhh-HHHHHHHHHhhc
Q 018916 235 ISEGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA-MLIPMEYFLMGY 303 (349)
Q Consensus 235 ~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~-~~~~i~~fl~~~ 303 (349)
....+.+++ +|+|+++|++|...+..+++.+.. +.++++++++++||+.+.+.++. +.+.|.+||++.
T Consensus 297 ~~~~~~~i~~~PvLii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 297 ILTYIKEISPRPILLIHGERAHSRYFSETAYAAA-AEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp SCTTGGGGTTSCEEEEEETTCTTHHHHHHHHHHS-CSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred hhHhHHhhcCCceEEEecCCCCCHHHHHHHHHhC-CCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 455678888 999999999999435666666653 23599999999999988887776 689999999864
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=165.47 Aligned_cols=177 Identities=13% Similarity=0.137 Sum_probs=131.3
Q ss_pred cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCC-------------------CCCCCCCCCCCC
Q 018916 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPP-------------------GHEFGAAAISDD 96 (349)
Q Consensus 38 g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~-------------------G~G~s~~~~~~~ 96 (349)
+.+.+|+|||+||++.+... |......+.+ +||+|+++|+| |+|.+. .
T Consensus 10 ~~~~~~~vv~~HG~~~~~~~------~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-----~ 78 (218)
T 1auo_A 10 AKPADACVIWLHGLGADRYD------FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR-----S 78 (218)
T ss_dssp SSCCSEEEEEECCTTCCTTT------THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-----E
T ss_pred CCCCCcEEEEEecCCCChhh------HHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc-----c
Confidence 34567899999999988754 3344444544 89999998776 444321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHc---CC--CcEEEEEechhHHHHHHHHH-hhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 97 EPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
....++++.++++..+++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~------------ 146 (218)
T 1auo_A 79 ISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG------------ 146 (218)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch------------
Confidence 22467888899999988876 54 48999999999999999999 99999999999998654300
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
+.. .+ . ...+++|+++++
T Consensus 147 -------------------~~~-~~-------~-----------------------------------~~~~~~P~l~i~ 164 (218)
T 1auo_A 147 -------------------DEL-EL-------S-----------------------------------ASQQRIPALCLH 164 (218)
T ss_dssp -------------------TTC-CC-------C-----------------------------------HHHHTCCEEEEE
T ss_pred -------------------hhh-hh-------h-----------------------------------hcccCCCEEEEE
Confidence 000 00 0 035678999999
Q ss_pred eCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 251 GESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
|++|.++ +..+.+.+.+++. +.++++++ +||..+.+.++++.+.|.++|
T Consensus 165 G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 165 GQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp ETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred eCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 9999998 5667788887753 38999999 999998887776666666655
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=168.29 Aligned_cols=212 Identities=11% Similarity=0.021 Sum_probs=137.5
Q ss_pred ccCCCCCeEEEecCCCCChhhhhcccccchhhhhh----hcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018916 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSL----LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (349)
Q Consensus 37 ~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~----l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~ 112 (349)
.+++..|+|||+||.+........ ..|...+..+ .+.||+|+++|+|+.+... ....++++++.+..+
T Consensus 36 ~~~~~~p~vv~lHGgg~~~g~~~~-~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-------~~~~~~d~~~~~~~l 107 (273)
T 1vkh_A 36 ISQNTREAVIYIHGGAWNDPENTP-NDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDAVSNITRL 107 (273)
T ss_dssp CCTTCCEEEEEECCSTTTCTTCCG-GGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-------TTHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEECCCcccCCcCCh-HHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-------CCcHHHHHHHHHHHH
Confidence 334567899999996532110000 1243343344 3789999999999875432 235678888888888
Q ss_pred HHHcCCCcEEEEEechhHHHHHHHHHhh-----------------hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 113 LNHFGLGAVMCMGVTAGAYILTLFAMKY-----------------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 113 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
++.++.++++|+||||||.+|+.++.++ |++++++|++++.......... . .
T Consensus 108 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~---~--------~ 176 (273)
T 1vkh_A 108 VKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIE---Y--------P 176 (273)
T ss_dssp HHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHH---C--------G
T ss_pred HHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhh---c--------c
Confidence 8888889999999999999999999986 8899999999886542111000 0 0
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.. ..+....+.. .... . .... ... ... .......+++|+++++|++|.
T Consensus 177 ~~-----~~~~~~~~~~-~~~~---~-~~~~-~~~------------~~~---------~~~~~~~~~~P~lii~G~~D~ 224 (273)
T 1vkh_A 177 EY-----DCFTRLAFPD-GIQM---Y-EEEP-SRV------------MPY---------VKKALSRFSIDMHLVHSYSDE 224 (273)
T ss_dssp GG-----HHHHHHHCTT-CGGG---C-CCCH-HHH------------HHH---------HHHHHHHHTCEEEEEEETTCS
T ss_pred cH-----HHHHHHHhcc-cccc---h-hhcc-ccc------------Chh---------hhhcccccCCCEEEEecCCcC
Confidence 00 0111112211 0000 0 0000 000 000 001122368999999999999
Q ss_pred cc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 256 FH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
++ +..+.+.+.++.. ++++++++++||..++++ +++.+.|.+||
T Consensus 225 ~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 225 LLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp SCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred CCChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 98 5677788877643 378999999999999988 88999998886
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=172.15 Aligned_cols=239 Identities=13% Similarity=0.065 Sum_probs=142.5
Q ss_pred ceeEEeCCCeeEEEEEccCC---CCCeEEEecCCC---CChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~---~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~~ 93 (349)
+...+...++.+.+..+.+. ..|+||++||++ ++... |......+..+ ||.|+++|+||+|.+..+
T Consensus 49 ~~~~i~~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~g~~v~~~d~rg~g~~~~~- 121 (311)
T 2c7b_A 49 RDVHIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIET------HDHICRRLSRLSDSVVVSVDYRLAPEYKFP- 121 (311)
T ss_dssp EEEEEEETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTGG------GHHHHHHHHHHHTCEEEEECCCCTTTSCTT-
T ss_pred EEEEecCCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChhh------hHHHHHHHHHhcCCEEEEecCCCCCCCCCC-
Confidence 45566677778877666442 347899999987 44433 33333445444 999999999999876421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCCCChhHHhhhhh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
....++.+.++++.+.++.+++ ++++++|||+||.+|+.+|.++|+ +++++++++|............ ..
T Consensus 122 ---~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-~~ 197 (311)
T 2c7b_A 122 ---TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASL-VE 197 (311)
T ss_dssp ---HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHH-HH
T ss_pred ---ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCC-cc
Confidence 1122334444455555555666 689999999999999999999887 4999999999876321100000 00
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceE
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 247 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 247 (349)
... +.. .. ........+...+........ ..........+..+. |++
T Consensus 198 ----~~~---------------~~~-~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~~~l~~~~-P~l 244 (311)
T 2c7b_A 198 ----FGV---------------AET-TS------LPIELMVWFGRQYLKRPEEAY------DFKASPLLADLGGLP-PAL 244 (311)
T ss_dssp ----HHH---------------CTT-CS------SCHHHHHHHHHHHCSSTTGGG------STTTCGGGSCCTTCC-CEE
T ss_pred ----HHH---------------hcc-CC------CCHHHHHHHHHHhCCCCcccc------CcccCcccccccCCC-cce
Confidence 000 000 00 011111111111110000000 000011112334444 999
Q ss_pred EEEeCCCccchhHHHHHHHhc--ccceeEEEEcCCCCccc-----ccChhhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFHSEAVHMTSKID--RRYSALVEVQACGSMVT-----EEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~~ 303 (349)
+++|++|.+++....+.+.+. +.+++++++++++|... .++++++.+.+.+||++.
T Consensus 245 ii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (311)
T 2c7b_A 245 VVTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSG 307 (311)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHH
Confidence 999999999865555444443 23489999999999776 355688999999999875
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.3e-22 Score=176.27 Aligned_cols=238 Identities=11% Similarity=0.051 Sum_probs=149.7
Q ss_pred CCCceeEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 18 ~~~~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
...+...+..+++.+....+.+ ...|+||++||++++...+ |......+..+||.|+++|+||+|.|...
T Consensus 166 ~~~~~v~i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~-----~~~~~~~l~~~G~~V~~~D~~G~G~s~~~-- 238 (415)
T 3mve_A 166 YIIKQLEIPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDM-----WRLFRDHLAKHDIAMLTVDMPSVGYSSKY-- 238 (415)
T ss_dssp SEEEEEEEECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGG-----HHHHHHTTGGGTCEEEEECCTTSGGGTTS--
T ss_pred CCeEEEEEEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHHH-----HHHHHHHHHhCCCEEEEECCCCCCCCCCC--
Confidence 3346667778888887666543 3457999999998775442 22223455678999999999999988632
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcC---CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 95 DDEPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
....+.++++.++.+++..+. .++++++|||+||.+++.+|..+|++|+++|++++..... .. ....
T Consensus 239 --~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~--~~---~~~~--- 308 (415)
T 3mve_A 239 --PLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDI--FA---SPQK--- 308 (415)
T ss_dssp --CCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHH--HH---CHHH---
T ss_pred --CCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccc--cc---cHHH---
Confidence 122456677777777776654 4689999999999999999999999999999999874321 00 0000
Q ss_pred HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCC-CChhhhccccCCceEEEE
Q 018916 172 LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR-PDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~ 250 (349)
.........+ .+...+.. ... .. ..+...+ ..+... ..... ..++++|+|+++
T Consensus 309 --~~~~~~~~~~-~~~~~~g~-~~~------~~---~~~~~~~------------~~~~~~~~~~~~-~~~i~~PvLii~ 362 (415)
T 3mve_A 309 --LQQMPKMYLD-VLASRLGK-SVV------DI---YSLSGQM------------AAWSLKVQGFLS-SRKTKVPILAMS 362 (415)
T ss_dssp --HTTSCHHHHH-HHHHHTTC-SSB------CH---HHHHHHG------------GGGCTTTTTTTT-SSCBSSCEEEEE
T ss_pred --HHHhHHHHHH-HHHHHhCC-Ccc------CH---HHHHHHH------------hhcCcccccccc-cCCCCCCEEEEE
Confidence 0011111111 11111111 000 10 0111100 000000 00111 358899999999
Q ss_pred eCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|++|.++ .....+.+..++ ++++.+++..+ .+.++++.+.+.+||++.
T Consensus 363 G~~D~~vp~~~~~~l~~~~~~--~~l~~i~g~~~---h~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 363 LEGDPVSPYSDNQMVAFFSTY--GKAKKISSKTI---TQGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp ETTCSSSCHHHHHHHHHTBTT--CEEEEECCCSH---HHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHhCCC--ceEEEecCCCc---ccchHHHHHHHHHHHHHH
Confidence 9999998 455667776665 99999997322 236788889999999864
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.9e-22 Score=166.87 Aligned_cols=221 Identities=10% Similarity=0.048 Sum_probs=134.1
Q ss_pred eeEEeCCCeeEEEEEccC---------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGD---------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~---------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
...+..++..+.+..+-+ ...|+||++||.+...... ..|......+.++||.|+++|+||||.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g~g~~~-- 80 (277)
T 3bxp_A 6 QRTLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSG---REEAPIATRMMAAGMHTVVLNYQLIVGDQ-- 80 (277)
T ss_dssp EEEECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCC---TTHHHHHHHHHHTTCEEEEEECCCSTTTC--
T ss_pred EEEeccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCC---ccchHHHHHHHHCCCEEEEEecccCCCCC--
Confidence 344555666665544422 3567999999943221110 11334445666789999999999998432
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH---cC--CCcEEEEEechhHHHHHHHHHhh--------------hcccceeEEecCC
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKY--------------RHRVLGLILVSPL 153 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--------------p~~v~~lvl~~~~ 153 (349)
. .....+++..+.+..+.+. ++ .++++++|||+||.+|+.+|.++ +.+++++|+++|.
T Consensus 81 --~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~ 157 (277)
T 3bxp_A 81 --S-VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPV 157 (277)
T ss_dssp --C-CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCC
T ss_pred --c-cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCc
Confidence 1 2223445555444444433 23 35899999999999999999885 6789999999987
Q ss_pred CCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCC
Q 018916 154 CKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP 233 (349)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (349)
...... + .... .....++.. ....
T Consensus 158 ~~~~~~--~-------------~~~~----~~~~~~~~~-------------------------------------~~~~ 181 (277)
T 3bxp_A 158 IDLTAG--F-------------PTTS----AARNQITTD-------------------------------------ARLW 181 (277)
T ss_dssp CBTTSS--S-------------SSSH----HHHHHHCSC-------------------------------------GGGS
T ss_pred ccCCCC--C-------------CCcc----ccchhccch-------------------------------------hhhc
Confidence 642210 0 0000 000011110 0001
Q ss_pred ChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccC---------------hhhHHH
Q 018916 234 DISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQ---------------PHAMLI 294 (349)
Q Consensus 234 ~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~---------------p~~~~~ 294 (349)
+....+.++.+|+|+++|++|.++ +..+.+.+.+... .++++++++++|...... .+++.+
T Consensus 182 ~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (277)
T 3bxp_A 182 AAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQ 261 (277)
T ss_dssp BGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHH
T ss_pred CHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHH
Confidence 222334566789999999999998 4667777777642 368999999999555443 467889
Q ss_pred HHHHHHhhcccc
Q 018916 295 PMEYFLMGYGLY 306 (349)
Q Consensus 295 ~i~~fl~~~~~~ 306 (349)
.+.+||++.++.
T Consensus 262 ~~~~fl~~~~~~ 273 (277)
T 3bxp_A 262 LALRWLQEQGLL 273 (277)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHhcccc
Confidence 999999988753
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-22 Score=162.22 Aligned_cols=175 Identities=14% Similarity=0.191 Sum_probs=129.5
Q ss_pred ccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCC-------------------CCCCCCCCCCC
Q 018916 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPP-------------------GHEFGAAAISD 95 (349)
Q Consensus 37 ~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~-------------------G~G~s~~~~~~ 95 (349)
.+++.+|+|||+||++.+... |...+..+.+ +||.|+++|+| |+|.+.
T Consensus 19 ~~~~~~~~vv~lHG~~~~~~~------~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~----- 87 (226)
T 3cn9_A 19 DAPNADACIIWLHGLGADRTD------FKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR----- 87 (226)
T ss_dssp CCTTCCEEEEEECCTTCCGGG------GHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-----
T ss_pred cCCCCCCEEEEEecCCCChHH------HHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc-----
Confidence 344577899999999988754 3344444444 89999998777 555322
Q ss_pred CCCCCCHHHHHHHHHHHHHHc---CC--CcEEEEEechhHHHHHHHHH-hhhcccceeEEecCCCCCCChhHHhhhhhhh
Q 018916 96 DEPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
.....++++.++++..+++.+ +. ++++++|||+||.+++.+|. ++|+++++++++++......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~----------- 156 (226)
T 3cn9_A 88 AIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD----------- 156 (226)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG-----------
T ss_pred cccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch-----------
Confidence 123467889999999999877 65 58999999999999999999 99999999999998543210
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 249 (349)
.+ . + ....+++|++++
T Consensus 157 ------------------------~~-~----------------~-----------------------~~~~~~~P~lii 172 (226)
T 3cn9_A 157 ------------------------DL-A----------------L-----------------------DERHKRIPVLHL 172 (226)
T ss_dssp ------------------------GC-C----------------C-----------------------CTGGGGCCEEEE
T ss_pred ------------------------hh-h----------------h-----------------------cccccCCCEEEE
Confidence 00 0 0 014567999999
Q ss_pred EeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 250 VGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 250 ~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+|++|.++ +..+.+.+.+++. +.++++++ +||..+.+.++ .+.+||++
T Consensus 173 ~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~----~i~~~l~~ 224 (226)
T 3cn9_A 173 HGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIH----DIGAWLRK 224 (226)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHH----HHHHHHHH
T ss_pred ecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHH----HHHHHHHh
Confidence 99999998 5667787877743 38999999 99998766554 45566654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=181.63 Aligned_cols=231 Identities=10% Similarity=0.036 Sum_probs=154.3
Q ss_pred ceeEEeC-CCeeEEEEEccCC----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC---CCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG---HEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G---~G~s~~~ 92 (349)
+...+.. ++..+++..+.+. ..|+||++||.+.+... ..|......+.++||.|+++|+|| ||.+...
T Consensus 334 ~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~ 409 (582)
T 3o4h_A 334 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDS----DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRL 409 (582)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCC----SSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHH
T ss_pred eEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccc----cccCHHHHHHHhCCCEEEEeccCCCCCCchhHHh
Confidence 3445555 5667887776543 56899999998665321 124456667778899999999999 5544211
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 93 I-SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 93 ~-~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
. ........++++.+.+..+++....++++++|||+||.+++.+|.++|+++++++++++..... ....
T Consensus 410 ~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---~~~~------- 479 (582)
T 3o4h_A 410 KIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWE---EMYE------- 479 (582)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHH---HHHH-------
T ss_pred hhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHH---HHhh-------
Confidence 1 1112234567777777777666445599999999999999999999999999999999854321 0000
Q ss_pred HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEe
Q 018916 172 LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 251 (349)
...... ..+...++.. ..+. +.. .+....+.++++|+|+++|
T Consensus 480 ----~~~~~~-~~~~~~~~~~----------~~~~-------------------~~~----~sp~~~~~~i~~P~lii~G 521 (582)
T 3o4h_A 480 ----LSDAAF-RNFIEQLTGG----------SREI-------------------MRS----RSPINHVDRIKEPLALIHP 521 (582)
T ss_dssp ----TCCHHH-HHHHHHHTTT----------CHHH-------------------HHH----TCGGGGGGGCCSCEEEEEE
T ss_pred ----cccchh-HHHHHHHcCc----------CHHH-------------------HHh----cCHHHHHhcCCCCEEEEec
Confidence 000000 0011111110 1100 000 1233456778999999999
Q ss_pred CCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCccc-ccChhhHHHHHHHHHhhc
Q 018916 252 ESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVT-EEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 252 ~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 303 (349)
++|..+ ...+++.+.++.. .+++++++++||..+ .++++++.+.+.+||++.
T Consensus 522 ~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 522 QNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp TTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 999998 5677788877653 379999999999987 578889999999999875
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-21 Score=167.18 Aligned_cols=231 Identities=10% Similarity=-0.023 Sum_probs=142.6
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCC---Chhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLAL---NYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~---~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
.+..++..+.+...+....|+|||+||.+. +... |...+..+. ..||+|+++|+||.+... ..
T Consensus 78 ~~~~~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~~~~------~~~~~~~la~~~g~~vi~~D~r~~~~~~-------~~ 144 (326)
T 3d7r_A 78 KLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPF------HWRLLDKITLSTLYEVVLPIYPKTPEFH-------ID 144 (326)
T ss_dssp EEEETTEEEEEEESTTCCSSEEEEECCSTTTSCCCHH------HHHHHHHHHHHHCSEEEEECCCCTTTSC-------HH
T ss_pred EEEECCEEEEEEeeCCCCCeEEEEECCCcccCCCCHH------HHHHHHHHHHHhCCEEEEEeCCCCCCCC-------ch
Confidence 344456566554443356789999999653 2222 223334444 349999999999974321 22
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
..++++++.+..+++.++.++++|+||||||.+|+.+|.++|++ ++++|+++|............ . ......
T Consensus 145 ~~~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~-~---~~~~~~ 220 (326)
T 3d7r_A 145 DTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDIS-D---ALIEQD 220 (326)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCC-H---HHHHHC
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHH-h---hhcccC
Confidence 46788888888888888889999999999999999999999887 999999999765421100000 0 000000
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
... .......+...+....... ..........+.. -+|+|+++|++|.
T Consensus 221 ~~~------------------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~P~lii~G~~D~ 268 (326)
T 3d7r_A 221 AVL------------------------SQFGVNEIMKKWANGLPLT-------DKRISPINGTIEG-LPPVYMFGGGREM 268 (326)
T ss_dssp SSC------------------------CHHHHHHHHHHHHTTSCTT-------STTTSGGGSCCTT-CCCEEEEEETTST
T ss_pred ccc------------------------CHHHHHHHHHHhcCCCCCC-------CCeECcccCCccc-CCCEEEEEeCccc
Confidence 000 0011111111110000000 0000001111222 2599999999998
Q ss_pred cchhHHHHHHHhcc--cceeEEEEcCCCCcccc---cChhhHHHHHHHHHhhc
Q 018916 256 FHSEAVHMTSKIDR--RYSALVEVQACGSMVTE---EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 256 ~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~~ 303 (349)
.++....+.+.+.. .++++++++++||..+. ++++++.+.|.+||++.
T Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~ 321 (326)
T 3d7r_A 269 THPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDED 321 (326)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSC
T ss_pred chHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHH
Confidence 76656666665543 23899999999999888 88899999999999875
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.9e-22 Score=172.49 Aligned_cols=221 Identities=14% Similarity=0.095 Sum_probs=134.9
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~---- 115 (349)
..|+||++||.+....+... ..|......+. +.||.|+++|+||++.+. ....++|..+.+..+.+.
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~-~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-------~~~~~~D~~~~~~~l~~~~~~~ 183 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANS-AIYDTLCRRLVGLCKCVVVSVNYRRAPENP-------YPCAYDDGWIALNWVNSRSWLK 183 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTB-HHHHHHHHHHHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHTCGGGC
T ss_pred CceEEEEECCCcCcCCCCcc-hhHHHHHHHHHHHcCCEEEEecCCCCCCCC-------CchhHHHHHHHHHHHHhCchhh
Confidence 45799999997643221111 01323334555 579999999999986533 123456666666655542
Q ss_pred --cCCC-cEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhh
Q 018916 116 --FGLG-AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (349)
Q Consensus 116 --l~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (349)
++.+ +++|+|||+||.+|+.+|.++|+ +++++|+++|.............. ...........+.+...+
T Consensus 184 ~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 258 (351)
T 2zsh_A 184 SKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESEKSL-----DGKYFVTVRDRDWYWKAF 258 (351)
T ss_dssp CTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHH-----TTTSSCCHHHHHHHHHHH
T ss_pred cCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChhhhhc-----CCCcccCHHHHHHHHHHh
Confidence 3456 99999999999999999999998 899999999887543211110000 000000000000011111
Q ss_pred cccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC-ceEEEEeCCCccchhHHHHHHHhc
Q 018916 190 FSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLIFVGESSPFHSEAVHMTSKID 268 (349)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~~~~~~~~~~~~~ 268 (349)
... .. .... ............+.++++ |+|+++|++|.+++....+.+.+.
T Consensus 259 ~~~-~~----------------------~~~~-----~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~ 310 (351)
T 2zsh_A 259 LPE-GE----------------------DREH-----PACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLK 310 (351)
T ss_dssp SCT-TC----------------------CTTS-----TTTCTTSTTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHH
T ss_pred CCC-CC----------------------CCCC-----cccCCCCCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHH
Confidence 100 00 0000 000000011234556677 999999999998866666766665
Q ss_pred cc--ceeEEEEcCCCCcccc----cChhhHHHHHHHHHhh
Q 018916 269 RR--YSALVEVQACGSMVTE----EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 269 ~~--~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~ 302 (349)
.. ++++++++++||..+. ++++++.+.|.+||++
T Consensus 311 ~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 311 KAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp HTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 32 3899999999998887 7889999999999975
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-21 Score=165.29 Aligned_cols=232 Identities=11% Similarity=0.056 Sum_probs=143.1
Q ss_pred ceeEEeC-CCeeEEEEEccC---CCCCeEEEecCCCCC-hhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALN-YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~---~~~p~vv~lHG~~~~-~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+...+.+ +|..+.+..+.+ +..|+||++||++++ ... | .....++++||.|+++|+||+|.|..+...
T Consensus 57 ~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~------~-~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~ 129 (318)
T 1l7a_A 57 YRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGE------I-HEMVNWALHGYATFGMLVRGQQRSEDTSIS 129 (318)
T ss_dssp EEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGG------H-HHHHHHHHTTCEEEEECCTTTSSSCCCCCC
T ss_pred EEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCC------c-ccccchhhCCcEEEEecCCCCCCCCCcccc
Confidence 3444554 555777665543 345789999999887 543 2 122366788999999999999988643110
Q ss_pred --------------CCCCCCHHHHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 96 --------------DEPVLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 96 --------------~~~~~~~~~~~~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+...+.+....+|+.++++.+. .++++++|||+||.+++.+|.++|+ +.++++++|...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~ 208 (318)
T 1l7a_A 130 PHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLS 208 (318)
T ss_dssp SSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSC
T ss_pred cCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCccc
Confidence 0112334566667666665442 2689999999999999999999886 888888777543
Q ss_pred CCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCCh
Q 018916 156 APSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDI 235 (349)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (349)
. ..... ......... ....++.. .. .... .......... .+.
T Consensus 209 ~--~~~~~---------~~~~~~~~~---~~~~~~~~-~~-------~~~~---------------~~~~~~~~~~-~~~ 250 (318)
T 1l7a_A 209 N--FERAI---------DVALEQPYL---EINSFFRR-NG-------SPET---------------EVQAMKTLSY-FDI 250 (318)
T ss_dssp C--HHHHH---------HHCCSTTTT---HHHHHHHH-SC-------CHHH---------------HHHHHHHHHT-TCH
T ss_pred C--HHHHH---------hcCCcCccH---HHHHHHhc-cC-------Cccc---------------HHHHHHhhcc-ccH
Confidence 2 11100 000000000 00001110 00 0000 0011111111 344
Q ss_pred hhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 236 SEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 236 ~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
...+.++++|+++++|++|.++ +....+.+.+.+ .+++++++++||.. ..++.+.+.+||++.
T Consensus 251 ~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~~~~~H~~----~~~~~~~~~~fl~~~ 315 (318)
T 1l7a_A 251 MNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEY----IPAFQTEKLAFFKQI 315 (318)
T ss_dssp HHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSC----CHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC-CeeEEEccCCCCCC----cchhHHHHHHHHHHH
Confidence 5566788999999999999998 566778888875 38999999999983 345677777887754
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=174.81 Aligned_cols=227 Identities=12% Similarity=0.124 Sum_probs=131.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~---- 115 (349)
..|+||++||++....+.... .|......+. +.||.|+++|+||+|.+. ....+++..+.+..+.+.
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~-~~~~~~~~la~~~g~~vv~~d~rg~~~~~-------~~~~~~d~~~~~~~l~~~~~~~ 153 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAAST-IFHDFCCEMAVHAGVVIASVDYRLAPEHR-------LPAAYDDAMEALQWIKDSRDEW 153 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBH-HHHHHHHHHHHHHTCEEEEEECCCTTTTC-------TTHHHHHHHHHHHHHHTCCCHH
T ss_pred CceEEEEEcCCcCcCCCCCch-hHHHHHHHHHHHCCcEEEEecCCCCCCCC-------CchHHHHHHHHHHHHHhCCcch
Confidence 457999999977432221111 1333444555 579999999999986532 113445555444444432
Q ss_pred ----cCCCcEEEEEechhHHHHHHHHHhhhc--------ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHH
Q 018916 116 ----FGLGAVMCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (349)
Q Consensus 116 ----l~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
++.++++|+|||+||.+|+.+|.++|+ +++++|+++|............... ..........+
T Consensus 154 ~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 228 (338)
T 2o7r_A 154 LTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLA-----NDSRLPTFVLD 228 (338)
T ss_dssp HHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTT-----TCSSSCHHHHH
T ss_pred hhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccC-----CCcccCHHHHH
Confidence 344789999999999999999999998 8999999999875432211100000 00000000011
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHM 263 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~ 263 (349)
.+...++.. ..... .+. ..+.. . ... ....+.+.++.+|+|+++|++|.+++....+
T Consensus 229 ~~~~~~~~~-~~~~~----~~~-----------~~~~~--~----~~~-~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~ 285 (338)
T 2o7r_A 229 LIWELSLPM-GADRD----HEY-----------CNPTA--E----SEP-LYSFDKIRSLGWRVMVVGCHGDPMIDRQMEL 285 (338)
T ss_dssp HHHHHHSCT-TCCTT----STT-----------TCCC----------C-CTHHHHHHHHTCEEEEEEETTSTTHHHHHHH
T ss_pred HHHHHhCCC-CCCCC----Ccc-----------cCCCC--C----Ccc-cccHhhhcCCCCCEEEEECCCCcchHHHHHH
Confidence 111111111 00000 000 00000 0 000 0011334456789999999999998655555
Q ss_pred HHHhcc--cceeEEEEcCCCCcccccCh---hhHHHHHHHHHhhc
Q 018916 264 TSKIDR--RYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 303 (349)
Q Consensus 264 ~~~~~~--~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 303 (349)
.+.+.. .++++++++++||.++.+++ +++.+.|.+||++.
T Consensus 286 ~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~ 330 (338)
T 2o7r_A 286 AERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDS 330 (338)
T ss_dssp HHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhh
Confidence 555543 23899999999999888776 78999999999875
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.5e-21 Score=165.25 Aligned_cols=230 Identities=8% Similarity=-0.022 Sum_probs=142.3
Q ss_pred ceeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC-
Q 018916 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS- 94 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~- 94 (349)
+...+.+ +|.++.+..+.+ +..|+||++||++.+... | .....++++||.|+++|+||+|.|.....
T Consensus 69 ~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~------~-~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~ 141 (337)
T 1vlq_A 69 YDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGF------P-HDWLFWPSMGYICFVMDTRGQGSGWLKGDT 141 (337)
T ss_dssp EEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCC------G-GGGCHHHHTTCEEEEECCTTCCCSSSCCCC
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCC------c-hhhcchhhCCCEEEEecCCCCCCcccCCCC
Confidence 4444554 555777766543 345789999998876422 2 22346677899999999999996642100
Q ss_pred C--------------------CCCCCCHHHHHHHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeE
Q 018916 95 D--------------------DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI 148 (349)
Q Consensus 95 ~--------------------~~~~~~~~~~~~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 148 (349)
. ....+.+....+|+.++++.+ +.++++++|||+||.+++.+|.++| ++++++
T Consensus 142 ~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~v 220 (337)
T 1vlq_A 142 PDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALL 220 (337)
T ss_dssp CBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEE
T ss_pred cccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEE
Confidence 0 011244557777777777665 2358999999999999999999998 599999
Q ss_pred EecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHH
Q 018916 149 LVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA 228 (349)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (349)
+++|.... ..... ......... ....++.. . .......+..
T Consensus 221 l~~p~~~~--~~~~~---------~~~~~~~~~---~~~~~~~~-~------------------------~~~~~~~~~~ 261 (337)
T 1vlq_A 221 CDVPFLCH--FRRAV---------QLVDTHPYA---EITNFLKT-H------------------------RDKEEIVFRT 261 (337)
T ss_dssp EESCCSCC--HHHHH---------HHCCCTTHH---HHHHHHHH-C------------------------TTCHHHHHHH
T ss_pred ECCCcccC--HHHHH---------hcCCCcchH---HHHHHHHh-C------------------------chhHHHHHHh
Confidence 99886543 11100 000000000 00111111 0 0001111111
Q ss_pred hcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 229 INGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 229 ~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+.. .+....+.++++|+|+++|++|.++ .....+.+.++. .+++++++++||.... ++..+.+.+||++
T Consensus 262 ~~~-~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~ 332 (337)
T 1vlq_A 262 LSY-FDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGGG---SFQAVEQVKFLKK 332 (337)
T ss_dssp HHT-TCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTTH---HHHHHHHHHHHHH
T ss_pred hhh-ccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEcCCCCCCCcc---hhhHHHHHHHHHH
Confidence 111 3444556678899999999999998 567778888875 4889999999998542 2445666666654
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=156.61 Aligned_cols=190 Identities=9% Similarity=-0.021 Sum_probs=118.7
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
.|+|||+||++++..++....+ .........+|+|+++|+||||. +..+++..+++.+..+++
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l--~~~~~~~~~~~~v~~pdl~~~g~---------------~~~~~l~~~~~~~~~~~i 64 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTF--KSWLQQHHPHIEMQIPQLPPYPA---------------EAAEMLESIVMDKAGQSI 64 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHH--HHHHHHHCTTSEEECCCCCSSHH---------------HHHHHHHHHHHHHTTSCE
T ss_pred CcEEEEeCCCCCCCCccHHHHH--HHHHHHcCCCcEEEEeCCCCCHH---------------HHHHHHHHHHHhcCCCcE
Confidence 4899999999877654311110 11112223479999999999974 346677888888888999
Q ss_pred EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCC
Q 018916 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQV 201 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
+|+||||||.+|+.+|.++|..+..++...+.. .... . ..... ........+..
T Consensus 65 ~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~------~~~~-----~----~~~~~-------~~~~~~~~~~~---- 118 (202)
T 4fle_A 65 GIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF------ELLS-----D----YLGEN-------QNPYTGQKYVL---- 118 (202)
T ss_dssp EEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH------HHGG-----G----GCEEE-------ECTTTCCEEEE----
T ss_pred EEEEEChhhHHHHHHHHHhcccchheeeccchH------HHHH-----H----hhhhh-------ccccccccccc----
Confidence 999999999999999999998776665443310 0000 0 00000 00000000000
Q ss_pred CchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCC
Q 018916 202 PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACG 281 (349)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 281 (349)
.... .. .. ........++++|+|+|+|++|.+++.. ...+..++ +++++++|+|
T Consensus 119 -~~~~----------------~~---~~---~~~~~~~~~~~~P~LiihG~~D~~Vp~~-~s~~l~~~--~~l~i~~g~~ 172 (202)
T 4fle_A 119 -ESRH----------------IY---DL---KAMQIEKLESPDLLWLLQQTGDEVLDYR-QAVAYYTP--CRQTVESGGN 172 (202)
T ss_dssp -CHHH----------------HH---HH---HTTCCSSCSCGGGEEEEEETTCSSSCHH-HHHHHTTT--SEEEEESSCC
T ss_pred -hHHH----------------HH---HH---HhhhhhhhccCceEEEEEeCCCCCCCHH-HHHHHhhC--CEEEEECCCC
Confidence 0000 00 00 0122335577899999999999999432 22233455 8999999999
Q ss_pred CcccccChhhHHHHHHHHHhh
Q 018916 282 SMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 282 H~~~~e~p~~~~~~i~~fl~~ 302 (349)
|. +++.+++.+.|.+||+-
T Consensus 173 H~--~~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 173 HA--FVGFDHYFSPIVTFLGL 191 (202)
T ss_dssp TT--CTTGGGGHHHHHHHHTC
T ss_pred cC--CCCHHHHHHHHHHHHhh
Confidence 95 46788899999999973
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-20 Score=161.66 Aligned_cols=233 Identities=16% Similarity=0.080 Sum_probs=141.7
Q ss_pred ceeEEeCCCeeEEEEEccC---CCCCeEEEecCCC---CChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~ 93 (349)
+...+...++.+.++.+.+ ...|+|||+||.+ ++... |......+.. .||.|+++|+||+|.+..
T Consensus 66 ~~~~i~~~~~~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~------~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~-- 137 (323)
T 3ain_A 66 EDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIES------YDPLCRAITNSCQCVTISVDYRLAPENKF-- 137 (323)
T ss_dssp EEEEEECSSSEEEEEEEECSSCSCCCEEEEECCSTTTSCCTTT------THHHHHHHHHHHTSEEEEECCCCTTTSCT--
T ss_pred EEEEecCCCCeEEEEEEecCCCCCCcEEEEECCCccccCChHH------HHHHHHHHHHhcCCEEEEecCCCCCCCCC--
Confidence 4555666666777665543 3568999999965 33322 3333344443 399999999999987542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHhhhccc---ceeEEecCCCCCCChhHHhhhh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRV---LGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
...+++..+.+..+.+.. +.++++|+|||+||.+|+.+|.++|+++ +++++++|............
T Consensus 138 -----p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-- 210 (323)
T 3ain_A 138 -----PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLY-- 210 (323)
T ss_dssp -----THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHH--
T ss_pred -----cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHH--
Confidence 134555555555554433 4678999999999999999999999877 89999999865432111000
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCce
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 246 (349)
.......+ .......+...+.......... ........+..+ .|+
T Consensus 211 ---~~~~~~~l-------------------------~~~~~~~~~~~~~~~~~~~~~~------~~sp~~~~l~~l-~P~ 255 (323)
T 3ain_A 211 ---DNGEGFFL-------------------------TREHIDWFGQQYLRSFADLLDF------RFSPILADLNDL-PPA 255 (323)
T ss_dssp ---HHSSSSSS-------------------------CHHHHHHHHHHHCSSGGGGGCT------TTCGGGSCCTTC-CCE
T ss_pred ---HhccCCCC-------------------------CHHHHHHHHHHhCCCCcccCCc------ccCcccCcccCC-CHH
Confidence 00000000 1111111111110000000000 000011122333 399
Q ss_pred EEEEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCcccc-----cChhhHHHHHHHHHhhc
Q 018916 247 LIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 247 lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 303 (349)
++++|++|.+++....+.+++... +++++++++++|..+. +.++++.+.+.+||++.
T Consensus 256 lii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 256 LIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp EEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred HEEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 999999999987667777776543 3799999999998876 34578999999999864
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=172.73 Aligned_cols=251 Identities=12% Similarity=0.036 Sum_probs=144.5
Q ss_pred ceeEEeCCCe-eEEEEEccC---C-CCCeEEEecCCC---CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKTSHG-SLSVTIYGD---Q-DKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~~~~-~l~~~~~g~---~-~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
+...+...++ .+.+..+.+ . ..|+||++||.+ ++... ..|......+.++||.|+++|+||+|.++..
T Consensus 83 ~~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~----~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~ 158 (361)
T 1jkm_A 83 STETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDN----RVHRRWCTDLAAAGSVVVMVDFRNAWTAEGH 158 (361)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSS----HHHHHHHHHHHHTTCEEEEEECCCSEETTEE
T ss_pred eeeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcc----cchhHHHHHHHhCCCEEEEEecCCCCCCCCC
Confidence 3445555544 666555432 2 347999999986 33320 0132333455558999999999999755421
Q ss_pred CCCCCCCCCHHHH---HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh-----hhcccceeEEecCCCCCCChhHHhh
Q 018916 93 ISDDEPVLSVDDL---ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKAPSWTEWLY 164 (349)
Q Consensus 93 ~~~~~~~~~~~~~---~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (349)
......++|. .+++.+.++.++.++++++|||+||.+++.++.. +|++++++|++++............
T Consensus 159 ---~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~ 235 (361)
T 1jkm_A 159 ---HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHER 235 (361)
T ss_dssp ---CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHH
T ss_pred ---CCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccc
Confidence 1122344454 3344444455677899999999999999999988 7889999999999875421100000
Q ss_pred hhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC
Q 018916 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 244 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 244 (349)
....... ... . .. . .........+...+........... ..........+..+.
T Consensus 236 ~~~~~~~-------------~~~-~-~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~l~~l~- 289 (361)
T 1jkm_A 236 RLTELPS-------------LVE-N-DG-Y------FIENGGMALLVRAYDPTGEHAEDPI---AWPYFASEDELRGLP- 289 (361)
T ss_dssp HHHHCTH-------------HHH-T-TT-S------SSCHHHHHHHHHHHSSSSTTTTCTT---TCGGGCCHHHHTTCC-
T ss_pred ccccCcc-------------hhh-c-cC-c------ccCHHHHHHHHHHhCCCCCCCCCcc---cCccccChhhHcCCC-
Confidence 0000000 000 0 00 0 0011111211111111000000000 000000123455665
Q ss_pred ceEEEEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCccc-c-----cCh-hhHHHHHHHHHhhcc
Q 018916 245 RSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVT-E-----EQP-HAMLIPMEYFLMGYG 304 (349)
Q Consensus 245 Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~-~-----e~p-~~~~~~i~~fl~~~~ 304 (349)
|+|+++|++|.+++..+.+.+.+.+. +++++++++++|..+ . +++ +++.+.|.+||+++.
T Consensus 290 P~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 290 PFVVAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCcCcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999999987666777777653 369999999999887 3 344 788999999998764
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-22 Score=167.28 Aligned_cols=197 Identities=11% Similarity=0.075 Sum_probs=128.3
Q ss_pred CCCeEEEecCCCC--ChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHH
Q 018916 41 DKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV---LNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~--~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---l~~ 115 (349)
..|+|||+||.+. .... .|...+..+.++||.|+++|+||+|.+.. ......++..+.+..+ .+.
T Consensus 49 ~~p~vv~lHGgg~~~~~~~-----~~~~~~~~l~~~G~~v~~~d~~g~~~~~~-----~~~~~~~d~~~~~~~l~~~~~~ 118 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVA-----QAESLAMAFAGHGYQAFYLEYTLLTDQQP-----LGLAPVLDLGRAVNLLRQHAAE 118 (283)
T ss_dssp CEEEEEEECCSTTTCCCHH-----HHHHHHHHHHTTTCEEEEEECCCTTTCSS-----CBTHHHHHHHHHHHHHHHSHHH
T ss_pred CCcEEEEECCCccccCCcc-----ccHHHHHHHHhCCcEEEEEeccCCCcccc-----CchhHHHHHHHHHHHHHHHHHH
Confidence 4679999999552 2211 13344456667899999999999987620 0112333333333322 233
Q ss_pred cCC--CcEEEEEechhHHHHHHHHHhhhcc-------------cceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 116 FGL--GAVMCMGVTAGAYILTLFAMKYRHR-------------VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 116 l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++ ++++++||||||.+|+.+|.++|++ ++++++++|.......... .
T Consensus 119 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~-----------------~ 181 (283)
T 3bjr_A 119 WHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPK-----------------D 181 (283)
T ss_dssp HTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC--------------------
T ss_pred hCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccccccccc-----------------c
Confidence 344 4899999999999999999999976 8999999887653211000 0
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
......++.. . ...+....+.++++|+|+++|++|.++ .
T Consensus 182 --~~~~~~~~~~------------------------------------~-~~~~~~~~~~~~~~P~lii~G~~D~~~p~~ 222 (283)
T 3bjr_A 182 --DATLATWTPT------------------------------------P-NELAADQHVNSDNQPTFIWTTADDPIVPAT 222 (283)
T ss_dssp -------CCCCC------------------------------------G-GGGCGGGSCCTTCCCEEEEEESCCTTSCTH
T ss_pred --cchHHHHHHH------------------------------------h-HhcCHHHhccCCCCCEEEEEcCCCCCCChH
Confidence 0000000000 0 001223345677899999999999998 4
Q ss_pred hHHHHHHHhccc--ceeEEEEcCCCCcccccCh-------------hhHHHHHHHHHhhc
Q 018916 259 EAVHMTSKIDRR--YSALVEVQACGSMVTEEQP-------------HAMLIPMEYFLMGY 303 (349)
Q Consensus 259 ~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p-------------~~~~~~i~~fl~~~ 303 (349)
....+.+.+++. .+++++++++||....+.+ +++.+.+.+||++.
T Consensus 223 ~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 223 NTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 677788887753 3689999999997777654 67889999999864
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=168.39 Aligned_cols=236 Identities=17% Similarity=0.170 Sum_probs=142.1
Q ss_pred CceeEEeCCCeeEEEEEcc-CCCCCeEEEecCCC---CChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYG-DQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g-~~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
.+...+...++.+.++.+. ....|+||++||++ ++... |......+. ..||.|+++|+||+|.+..+
T Consensus 56 ~~~~~i~~~~g~i~~~~y~~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p-- 127 (311)
T 1jji_A 56 VEDRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIES------HDALCRRIARLSNSTVVSVDYRLAPEHKFP-- 127 (311)
T ss_dssp EEEEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGG------GHHHHHHHHHHHTSEEEEEECCCTTTSCTT--
T ss_pred EEEEEecCCCCcEEEEEEcCCCCceEEEEECCcccccCChhH------hHHHHHHHHHHhCCEEEEecCCCCCCCCCC--
Confidence 3555666666677665552 23557999999987 44333 223333444 46999999999999987532
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhHHhhhhhh
Q 018916 95 DDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
....+..+.++++.+.++.++++ +++|+|||+||.+|+.++.+++++ ++++|+++|............
T Consensus 128 --~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~---- 201 (311)
T 1jji_A 128 --AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLL---- 201 (311)
T ss_dssp --HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHH----
T ss_pred --CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHH----
Confidence 11234455555666666666765 899999999999999999999886 999999999876432111000
Q ss_pred hHHHHhcC-cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceE
Q 018916 169 SNLLYYYG-MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 247 (349)
Q Consensus 169 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 247 (349)
....... +.......+...++.. ...... .........+..+ .|++
T Consensus 202 -~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~------~~~~p~~~~l~~~-~P~l 248 (311)
T 1jji_A 202 -EFGEGLWILDQKIMSWFSEQYFSR-------------------------EEDKFN------PLASVIFADLENL-PPAL 248 (311)
T ss_dssp -HTSSSCSSCCHHHHHHHHHHHCSS-------------------------GGGGGC------TTTSGGGSCCTTC-CCEE
T ss_pred -HhcCCCccCCHHHHHHHHHHhCCC-------------------------CccCCC------cccCcccccccCC-Chhe
Confidence 0000000 0000001111111111 000000 0000011123333 4999
Q ss_pred EEEeCCCccchhHHHHHHHhcc--cceeEEEEcCCCCccccc-----ChhhHHHHHHHHHhh
Q 018916 248 IFVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTEE-----QPHAMLIPMEYFLMG 302 (349)
Q Consensus 248 ii~g~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-----~p~~~~~~i~~fl~~ 302 (349)
+++|++|.+++....+.+.+.. .+++++++++++|..+.. ..+++.+.+.+||++
T Consensus 249 i~~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 249 IITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EEEcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999999998656556665543 238999999999977653 346788889999875
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-20 Score=160.47 Aligned_cols=233 Identities=12% Similarity=0.036 Sum_probs=146.1
Q ss_pred CceeEEeCCCeeEEEEEccCCCCCe-EEEecCCC---CChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHGSLSVTIYGDQDKPA-LVTYPDLA---LNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 20 ~~~~~i~~~~~~l~~~~~g~~~~p~-vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~~~ 94 (349)
.+...+..++..+ |...+...+++ ||++||.+ ++... |......+..+ ||.|+++|+|+++.+.
T Consensus 58 ~~~~~~~~~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~~~~------~~~~~~~la~~~g~~v~~~dyr~~~~~~---- 126 (322)
T 3k6k_A 58 VELTLTDLGGVPC-IRQATDGAGAAHILYFHGGGYISGSPST------HLVLTTQLAKQSSATLWSLDYRLAPENP---- 126 (322)
T ss_dssp CEEEEEEETTEEE-EEEECTTCCSCEEEEECCSTTTSCCHHH------HHHHHHHHHHHHTCEEEEECCCCTTTSC----
T ss_pred ceEEEEEECCEeE-EecCCCCCCCeEEEEEcCCcccCCChHH------HHHHHHHHHHhcCCEEEEeeCCCCCCCC----
Confidence 3445566677777 66666556667 99999976 33322 22333455544 9999999999986543
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-cCCCcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhHHhhhhhhh
Q 018916 95 DDEPVLSVDDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
....++|..+.+..+++. ++.++++|+|||+||.+|+.+|.+++++ ++++++++|...............
T Consensus 127 ---~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~-- 201 (322)
T 3k6k_A 127 ---FPAAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLA-- 201 (322)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTG--
T ss_pred ---CchHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhcc--
Confidence 124567777777777666 5667999999999999999999999886 999999999876542211100000
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 249 (349)
..... ........+...+........ .........+ +...|+|++
T Consensus 202 ---~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------~~~sp~~~~~-~~~pP~li~ 246 (322)
T 3k6k_A 202 ---DRDFL------------------------AEPDTLGEMSELYVGGEDRKN-------PLISPVYADL-SGLPEMLIH 246 (322)
T ss_dssp ---GGCSS------------------------SCHHHHHHHHHHHHTTSCTTC-------TTTCGGGSCC-TTCCCEEEE
T ss_pred ---CCCCc------------------------CCHHHHHHHHHHhcCCCCCCC-------CcCCcccccc-cCCCcEEEE
Confidence 00000 011111111111100000000 0000011111 223699999
Q ss_pred EeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCcccc-----cChhhHHHHHHHHHhhc
Q 018916 250 VGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 250 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 303 (349)
+|++|.+++....+.+.+... .++++++++++|..+. ++++++.+.+.+||++.
T Consensus 247 ~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3k6k_A 247 VGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISAR 307 (322)
T ss_dssp EESSCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTT
T ss_pred ECCcCccHHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHH
Confidence 999999887777777777643 3799999999997664 44678999999999986
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.8e-22 Score=177.77 Aligned_cols=236 Identities=11% Similarity=0.069 Sum_probs=143.8
Q ss_pred eEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
..+.+.++.+....+.+ +..|+||++||++.+. |......+.++||.|+++|+||+|.+... ...
T Consensus 136 ~~~~~~~~~l~~~l~~P~~~~~~P~Vv~~hG~~~~~--------~~~~a~~La~~Gy~V~a~D~rG~g~~~~~----~~~ 203 (422)
T 3k2i_A 136 WRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGL--------LEYRASLLAGHGFATLALAYYNFEDLPNN----MDN 203 (422)
T ss_dssp EEEEEEETTEEEEEEECSSSCCBCEEEEECCTTCSC--------CCHHHHHHHTTTCEEEEEECSSSTTSCSS----CSC
T ss_pred EEEEEeCCcEEEEEEcCCCCCCcCEEEEEcCCCcch--------hHHHHHHHHhCCCEEEEEccCCCCCCCCC----ccc
Confidence 34445455565555443 3568999999987653 32334566678999999999999876532 223
Q ss_pred CCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 100 LSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
+.++++.+.+..+.+.. +.++++++||||||.+|+.+|.++|+ ++++|++++........ +....... ...
T Consensus 204 ~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~-~~~~~~~~-----~~~ 276 (422)
T 3k2i_A 204 ISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTA-INYKHSSI-----PPL 276 (422)
T ss_dssp EETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSC-EEETTEEE-----CCC
T ss_pred CCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCc-hhhcCCcC-----CCc
Confidence 56777777766665553 34799999999999999999999998 99999999876432110 00000000 000
Q ss_pred chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc
Q 018916 178 CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 257 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 257 (349)
..... ...+...... .+...+. ..... . ..+....+.++++|+|+|+|++|.++
T Consensus 277 ~~~~~----~~~~~~~~~~------------~~~~~~~-~~~~~-------~--~~~~~~~~~~i~~P~Lii~G~~D~~v 330 (422)
T 3k2i_A 277 GYDLR----RIKVAFSGLV------------DIVDIRN-ALVGG-------Y--KNPSMIPIEKAQGPILLIVGQDDHNW 330 (422)
T ss_dssp CBCGG----GCEECTTSCE------------ECTTCBC-CCTTG-------G--GSTTBCCGGGCCSCEEEEEETTCSSS
T ss_pred ccchh----hcccCcchhH------------HHHHHHh-hhhhc-------c--cccccccHHHCCCCEEEEEeCCCCCC
Confidence 00000 0000000000 0000000 00000 0 01122346788999999999999998
Q ss_pred hh---HHHHHHHhccc---ceeEEEEcCCCCcc----------------------------cccChhhHHHHHHHHHhhc
Q 018916 258 SE---AVHMTSKIDRR---YSALVEVQACGSMV----------------------------TEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 258 ~~---~~~~~~~~~~~---~~~~~~i~~~gH~~----------------------------~~e~p~~~~~~i~~fl~~~ 303 (349)
+. .+.+.+.+... ++++++++++||.+ +.+.++++.+.|.+||++.
T Consensus 331 p~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~ 410 (422)
T 3k2i_A 331 RSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKH 410 (422)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 32 24566666542 27899999999987 3356778999999999986
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-21 Score=163.10 Aligned_cols=212 Identities=14% Similarity=0.117 Sum_probs=139.5
Q ss_pred CCCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 27 TSHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 27 ~~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.++..+.++...+ +..|+||++||.+...... ..|......+.++||.|+++|+||+|.|.. ..
T Consensus 22 ~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~-------~~ 91 (276)
T 3hxk_A 22 NDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQ---RESDPLALAFLAQGYQVLLLNYTVMNKGTN-------YN 91 (276)
T ss_dssp BTTBEEEEECCCC------CCBCEEEEECCSTTTSCCG---GGSHHHHHHHHHTTCEEEEEECCCTTSCCC-------SC
T ss_pred CCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCc---hhhHHHHHHHHHCCCEEEEecCccCCCcCC-------CC
Confidence 3566777665543 3468999999954222111 113345556677899999999999988652 12
Q ss_pred CHHHHHHHHHHHH----HH-----cCCCcEEEEEechhHHHHHHHHHh-hhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 101 SVDDLADQIAEVL----NH-----FGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 101 ~~~~~~~~l~~~l----~~-----l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
......+|+.+++ +. ++.++++++||||||.+++.++.+ .+.+++++++++|....... +...
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~--~~~~----- 164 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG--WPSD----- 164 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS--CSSS-----
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh--CCcc-----
Confidence 3334444444333 32 234689999999999999999988 78899999999987653221 0000
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
..+ ..++ . .+. . ..+....+.++++|+++++
T Consensus 165 ----~~~---------~~~~-~----------~~~------~-------------------~~~~~~~~~~~~~P~lii~ 195 (276)
T 3hxk_A 165 ----LSH---------FNFE-I----------ENI------S-------------------EYNISEKVTSSTPPTFIWH 195 (276)
T ss_dssp ----SSS---------SCCC-C----------SCC------G-------------------GGBTTTTCCTTSCCEEEEE
T ss_pred ----hhh---------hhcC-c----------hhh------h-------------------hCChhhccccCCCCEEEEe
Confidence 000 0000 0 000 0 0112233456789999999
Q ss_pred eCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccCh-------------hhHHHHHHHHHhhcc
Q 018916 251 GESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQP-------------HAMLIPMEYFLMGYG 304 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p-------------~~~~~~i~~fl~~~~ 304 (349)
|++|.++ +....+.+.+... .+++++++++||......+ +++.+.+.+||++..
T Consensus 196 G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 196 TADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp ETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred cCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 9999998 5677788887653 3689999999998776555 578888999998863
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=158.25 Aligned_cols=169 Identities=11% Similarity=0.005 Sum_probs=123.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH------
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN------ 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~------ 114 (349)
..|+|||+||++++... |......+.++||.|+++|+||.+. ...+....+.+.+...
T Consensus 48 ~~p~vv~~HG~~~~~~~------~~~~~~~l~~~G~~v~~~d~~~s~~----------~~~~~~~~~~l~~~~~~~~~~~ 111 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPST------YAGLLSHWASHGFVVAAAETSNAGT----------GREMLACLDYLVRENDTPYGTY 111 (258)
T ss_dssp CEEEEEEECCTTCCGGG------GHHHHHHHHHHTCEEEEECCSCCTT----------SHHHHHHHHHHHHHHHSSSSTT
T ss_pred CceEEEEECCCCCCchh------HHHHHHHHHhCCeEEEEecCCCCcc----------HHHHHHHHHHHHhccccccccc
Confidence 55899999999987643 4344456667799999999996421 1233444444444333
Q ss_pred --HcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccc
Q 018916 115 --HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (349)
Q Consensus 115 --~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (349)
.++.++++++||||||.+++.++ .+.++++++++++.... .
T Consensus 112 ~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~-----------------------------------~ 154 (258)
T 2fx5_A 112 SGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG-----------------------------------L 154 (258)
T ss_dssp TTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-----------------------------------T
T ss_pred ccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-----------------------------------c
Confidence 44557899999999999999887 45679999988763210 0
Q ss_pred ccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch--h-HHHHHHHhcc
Q 018916 193 QEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E-AVHMTSKIDR 269 (349)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~--~-~~~~~~~~~~ 269 (349)
. .....+.++++|+|+++|++|.+++ . .+.+.+.. +
T Consensus 155 -~---------------------------------------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~ 193 (258)
T 2fx5_A 155 -G---------------------------------------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-N 193 (258)
T ss_dssp -T---------------------------------------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-S
T ss_pred -c---------------------------------------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-C
Confidence 0 0012345678999999999999882 2 56666663 3
Q ss_pred cceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 270 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 270 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.++++++++||+.+.++++++.+.|.+||++.
T Consensus 194 ~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 194 VPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp SCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCccccchHHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999854
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=182.49 Aligned_cols=227 Identities=9% Similarity=0.095 Sum_probs=146.0
Q ss_pred ceeEEeC-CC-eeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccch----hhhhhhcCCeEEEEECCCCCCC
Q 018916 21 KDNLIKT-SH-GSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCP----EACSLLLHNFCIYHINPPGHEF 88 (349)
Q Consensus 21 ~~~~i~~-~~-~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~----~~~~~l~~g~~vi~~D~~G~G~ 88 (349)
+...+.+ ++ ..+++..+.+. ..|+||++||.+.+... .. .|.. ....+.++||.|+++|+||+|.
T Consensus 456 ~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~--~~-~~~~~~~~~~~~la~~G~~v~~~d~rG~g~ 532 (706)
T 2z3z_A 456 RTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLV--TK-TWRSSVGGWDIYMAQKGYAVFTVDSRGSAN 532 (706)
T ss_dssp EEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCC--CS-CC----CCHHHHHHHTTCEEEEECCTTCSS
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceee--cc-ccccCchHHHHHHHhCCcEEEEEecCCCcc
Confidence 3445555 44 58888877653 23789999997655411 00 1222 3445567899999999999998
Q ss_pred CCCCCCC-CCCCCCHHHHHHHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH
Q 018916 89 GAAAISD-DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 89 s~~~~~~-~~~~~~~~~~~~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (349)
+..+... ....+.. ...+|+.++++.+ +.++++++||||||++++.+|.++|++++++|++++.......
T Consensus 533 s~~~~~~~~~~~~~~-~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-- 609 (706)
T 2z3z_A 533 RGAAFEQVIHRRLGQ-TEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY-- 609 (706)
T ss_dssp SCHHHHHTTTTCTTH-HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS--
T ss_pred cchhHHHHHhhccCC-ccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH--
Confidence 7532110 0111111 1233444433332 3468999999999999999999999999999999986542100
Q ss_pred HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc
Q 018916 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 241 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (349)
.. .....++.. . ....+ .+.. .+....+.+
T Consensus 610 ----------------~~----~~~~~~~~~-~------~~~~~---~~~~--------------------~~~~~~~~~ 639 (706)
T 2z3z_A 610 ----------------AI----MYGERYFDA-P------QENPE---GYDA--------------------ANLLKRAGD 639 (706)
T ss_dssp ----------------BH----HHHHHHHCC-T------TTCHH---HHHH--------------------HCGGGGGGG
T ss_pred ----------------Hh----hhhhhhcCC-c------ccChh---hhhh--------------------CCHhHhHHh
Confidence 00 011112211 0 00111 1100 123445678
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++|+|+++|++|.++ ...+++.+.++.. ..++++++++||.++.++++++.+.|.+||++.
T Consensus 640 i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 640 LKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp CCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 8999999999999988 5667777777642 368999999999998888999999999999864
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=167.47 Aligned_cols=236 Identities=11% Similarity=0.082 Sum_probs=139.0
Q ss_pred ceeEEeCCCeeEEEEEccCC----CCCeEEEecC---CCCChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ----DKPALVTYPD---LALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~----~~p~vv~lHG---~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~ 92 (349)
+...+...++.+.++.+.+. ..|+||++|| ++++... |......+..+ ||.|+++|+||+|.+..
T Consensus 49 ~~~~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~------~~~~~~~la~~~g~~v~~~d~rg~~~~~~- 121 (310)
T 2hm7_A 49 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLET------HDPVCRVLAKDGRAVVFSVDYRLAPEHKF- 121 (310)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTT------THHHHHHHHHHHTSEEEEECCCCTTTSCT-
T ss_pred EEEEeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChhH------hHHHHHHHHHhcCCEEEEeCCCCCCCCCC-
Confidence 45566667778877776543 3579999999 4444322 43444455554 99999999999986531
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH---cC--CCcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCCCChhHHh
Q 018916 93 ISDDEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWL 163 (349)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~ 163 (349)
....++..+.+..+.+. ++ .++++++|||+||.+|+.+|.++|+ +++++++++|..........
T Consensus 122 ------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~- 194 (310)
T 2hm7_A 122 ------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPP- 194 (310)
T ss_dssp ------THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCC-
T ss_pred ------CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCC-
Confidence 12233433333333322 23 3689999999999999999999987 69999999998764310000
Q ss_pred hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC
Q 018916 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 243 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (349)
..... +... . .........+...+........ ..... ......+..+
T Consensus 195 --~~~~~------------------~~~~-~------~~~~~~~~~~~~~~~~~~~~~~----~~~~~-p~~~~~l~~~- 241 (310)
T 2hm7_A 195 --ASIEE------------------NAEG-Y------LLTGGMMLWFRDQYLNSLEELT----HPWFS-PVLYPDLSGL- 241 (310)
T ss_dssp --HHHHH------------------TSSS-S------SSCHHHHHHHHHHHCSSGGGGG----CTTTC-GGGCSCCTTC-
T ss_pred --cchhh------------------cCCC-C------CCCHHHHHHHHHHhCCCCCccC----CccCC-CCcCccccCC-
Confidence 00000 0000 0 0011111111111110000000 00000 0001123333
Q ss_pred CceEEEEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCcccc-----cChhhHHHHHHHHHhhc
Q 018916 244 CRSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 244 ~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 303 (349)
.|+++++|++|.+++....+.+.+... .++++++++++|.... ++++++.+.+.+||++.
T Consensus 242 ~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 242 PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 308 (310)
T ss_dssp CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHH
Confidence 399999999999986666777776543 3799999999996553 55688999999999864
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=181.94 Aligned_cols=228 Identities=11% Similarity=0.094 Sum_probs=151.6
Q ss_pred ceeEEeC-CC-eeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccc-----hhhhhhhcCCeEEEEECCCCCC
Q 018916 21 KDNLIKT-SH-GSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-----PEACSLLLHNFCIYHINPPGHE 87 (349)
Q Consensus 21 ~~~~i~~-~~-~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~-----~~~~~~l~~g~~vi~~D~~G~G 87 (349)
+...+.+ +| ..+++..+.+. ..|+||++||++.+.... ..|. .....+.++||.|+++|+||+|
T Consensus 488 ~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g 564 (741)
T 2ecf_A 488 EFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVT---DSWPGRGDHLFNQYLAQQGYVVFSLDNRGTP 564 (741)
T ss_dssp EEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCS---SCCCCSHHHHHHHHHHHTTCEEEEECCTTCS
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCccccc---ccccccchhHHHHHHHhCCCEEEEEecCCCC
Confidence 4445655 55 68998887653 247899999987664110 0122 2345566889999999999999
Q ss_pred CCCCCCC----CCCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH
Q 018916 88 FGAAAIS----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 88 ~s~~~~~----~~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (349)
.+..+.. .......++++.+.+..+.+. ++.++++++||||||.+++.+|.++|++++++|++++........
T Consensus 565 ~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~- 643 (741)
T 2ecf_A 565 RRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYD- 643 (741)
T ss_dssp SSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSB-
T ss_pred CCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhc-
Confidence 8653211 011112355665555555443 234689999999999999999999999999999999876421100
Q ss_pred HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc
Q 018916 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 241 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (349)
. .+...++.. .....+.+. . .+....+.+
T Consensus 644 -----------------~----~~~~~~~~~----------~~~~~~~~~----------------~----~~~~~~~~~ 672 (741)
T 2ecf_A 644 -----------------S----HYTERYMDL----------PARNDAGYR----------------E----ARVLTHIEG 672 (741)
T ss_dssp -----------------H----HHHHHHHCC----------TGGGHHHHH----------------H----HCSGGGGGG
T ss_pred -----------------c----ccchhhcCC----------cccChhhhh----------------h----cCHHHHHhh
Confidence 0 011112111 000001110 0 122345678
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++|+|+++|++|..+ ...+.+.+.++.. ..++++++++||..+.+.++++.+.|.+||++.
T Consensus 673 i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 738 (741)
T 2ecf_A 673 LRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRC 738 (741)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHh
Confidence 8899999999999988 5677788887653 258999999999998888889999999999875
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-20 Score=160.85 Aligned_cols=238 Identities=12% Similarity=-0.009 Sum_probs=136.7
Q ss_pred ceeEEeCCCe--eEEEEEccC----CCCCeEEEecCCC---CChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCC
Q 018916 21 KDNLIKTSHG--SLSVTIYGD----QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGA 90 (349)
Q Consensus 21 ~~~~i~~~~~--~l~~~~~g~----~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~ 90 (349)
+...+...++ .+.++.+.+ ...|+||++||++ ++... |......+.. .||.|+++|+||+|.+.
T Consensus 52 ~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~G~~Vv~~d~rg~~~~~ 125 (323)
T 1lzl_A 52 RELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAES------SDPFCVEVARELGFAVANVEYRLAPETT 125 (323)
T ss_dssp EEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGG------GHHHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred EEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChhh------hHHHHHHHHHhcCcEEEEecCCCCCCCC
Confidence 4455555444 566555432 3457999999987 44332 3234445555 49999999999998764
Q ss_pred CCCCCCCCCCCHHHHH---HHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhH
Q 018916 91 AAISDDEPVLSVDDLA---DQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 91 ~~~~~~~~~~~~~~~~---~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~ 161 (349)
.+ ..+++.. +.+.+.++.+++ ++++|+|||+||.+|+.++.+++++ ++++++++|.........
T Consensus 126 ~~-------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~ 198 (323)
T 1lzl_A 126 FP-------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV 198 (323)
T ss_dssp TT-------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH
T ss_pred CC-------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCch
Confidence 21 2233333 333333345555 6899999999999999999998874 999999999876432111
Q ss_pred HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChh-hhcc
Q 018916 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDIS-EGLR 240 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ 240 (349)
... .......+...........++.. ... .. ........ . .... ..+.
T Consensus 199 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~----------~~~~~~~~-------~--sp~~~~~~~ 247 (323)
T 1lzl_A 199 SMT-----NFVDTPLWHRPNAILSWKYYLGE-SYS------GP----------EDPDVSIY-------A--APSRATDLT 247 (323)
T ss_dssp HHH-----HCSSCSSCCHHHHHHHHHHHHCT-TCC------CT----------TCSCCCTT-------T--CGGGCSCCT
T ss_pred hHH-----HhccCCCCCHHHHHHHHHHhCCC-Ccc------cc----------cccCCCcc-------c--CcccCcccC
Confidence 000 00000000000000011111111 000 00 00000000 0 0000 0111
Q ss_pred ccCCceEEEEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCcccc----cChhhHHHHHHHHHhhc
Q 018916 241 KLQCRSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~ 303 (349)
. .+|+++++|++|.+++....+.+.+... .++++++++++|.... +.++++.+.+.+||++.
T Consensus 248 ~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 315 (323)
T 1lzl_A 248 G-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRG 315 (323)
T ss_dssp T-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHH
T ss_pred C-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHH
Confidence 1 2799999999999986666777766542 3899999999997543 23678999999999876
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=151.45 Aligned_cols=171 Identities=11% Similarity=0.096 Sum_probs=118.9
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEEC-------------CCCCCCCCCCCCCCCCCCCHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN-------------PPGHEFGAAAISDDEPVLSVDDLA 106 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D-------------~~G~G~s~~~~~~~~~~~~~~~~~ 106 (349)
+..| |||+||++++... |... ...+..++.|+++| ++|||.+... ......+++.+
T Consensus 15 ~~~p-vv~lHG~g~~~~~------~~~~-~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~---~~~~~~~~~~~ 83 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEHQ------LVEI-AEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKE---NFDLESLDEET 83 (209)
T ss_dssp TSCC-EEEECCTTCCTTT------THHH-HHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGG---GBCHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHHH------HHHH-HHhcCCCceEEEecCCcCCCCcccceecccccccccC---CCCHHHHHHHH
Confidence 3567 9999999888754 3233 34555899999999 7777664421 11112334444
Q ss_pred HHHHHHH----HHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchh
Q 018916 107 DQIAEVL----NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (349)
Q Consensus 107 ~~l~~~l----~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (349)
+++.+++ +.+++ ++++++||||||.+++.+|.++|++++++|++++......
T Consensus 84 ~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------------- 141 (209)
T 3og9_A 84 DWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF---------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC----------------------
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc----------------------
Confidence 4444444 44565 7899999999999999999999999999999988543110
Q ss_pred HHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h
Q 018916 181 VKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 258 (349)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~ 258 (349)
. . .....++|+++++|++|+++ +
T Consensus 142 -------------~--------~----------------------------------~~~~~~~p~li~~G~~D~~v~~~ 166 (209)
T 3og9_A 142 -------------E--------Q----------------------------------TVQLDDKHVFLSYAPNDMIVPQK 166 (209)
T ss_dssp -------------C--------C----------------------------------CCCCTTCEEEEEECTTCSSSCHH
T ss_pred -------------c--------c----------------------------------cccccCCCEEEEcCCCCCccCHH
Confidence 0 0 01134689999999999998 4
Q ss_pred hHHHHHHHhcccc--eeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 259 EAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 259 ~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
..+.+.+.+...+ .++++++ +||... .+..+.+.+||++.
T Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~-~gH~~~----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 167 NFGDLKGDLEDSGCQLEIYESS-LGHQLT----QEEVLAAKKWLTET 208 (209)
T ss_dssp HHHHHHHHHHHTTCEEEEEECS-STTSCC----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceEEEEcC-CCCcCC----HHHHHHHHHHHHhh
Confidence 6677777776533 6777776 899874 34456777888764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-20 Score=173.44 Aligned_cols=234 Identities=11% Similarity=0.054 Sum_probs=155.7
Q ss_pred ceeEEeC-CCeeEEEEEccCC----------CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC---C
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ----------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG---H 86 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~----------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G---~ 86 (349)
+...+.. ++..+++..+.+. ..|+||++||++.+... ..|......+.++||.|+++|+|| |
T Consensus 392 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~rG~~~~ 467 (662)
T 3azo_A 392 QIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVP----AVLDLDVAYFTSRGIGVADVNYGGSTGY 467 (662)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCC----CSCCHHHHHHHTTTCEEEEEECTTCSSS
T ss_pred eEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCc----ccchHHHHHHHhCCCEEEEECCCCCCCc
Confidence 3444555 5667877766432 35789999999766532 124455566778899999999999 7
Q ss_pred CCCCCCC-CCCCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh
Q 018916 87 EFGAAAI-SDDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (349)
Q Consensus 87 G~s~~~~-~~~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (349)
|.+.... ........++++.+.+..+++. ++.++++++||||||++++.++.. |++++++|++++..... ...
T Consensus 468 G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~---~~~ 543 (662)
T 3azo_A 468 GRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLL---GWA 543 (662)
T ss_dssp CHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHH---HHH
T ss_pred cHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHH---HHh
Confidence 6553211 1112235678888888888887 566799999999999999988875 99999999998865321 100
Q ss_pred hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC
Q 018916 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 243 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 243 (349)
. ....... ..+...++.. .++..+.+.. .+....+.+++
T Consensus 544 ~----------~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~--------------------~sp~~~~~~~~ 582 (662)
T 3azo_A 544 D----------GGTHDFE-SRYLDFLIGS----------FEEFPERYRD--------------------RAPLTRADRVR 582 (662)
T ss_dssp T----------TCSCGGG-TTHHHHHTCC----------TTTCHHHHHH--------------------TCGGGGGGGCC
T ss_pred c----------ccccchh-hHhHHHHhCC----------CccchhHHHh--------------------hChHhHhccCC
Confidence 0 0000000 0011112221 0000011100 12344567888
Q ss_pred CceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 244 CRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 244 ~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
+|+|+++|++|.++ ...+.+.+.++.. .+++++++++||.+.. ++++++.+.+.+||++.
T Consensus 583 ~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 647 (662)
T 3azo_A 583 VPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV 647 (662)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999998 6777888888763 3689999999997643 67788999999999986
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=169.48 Aligned_cols=235 Identities=11% Similarity=0.095 Sum_probs=141.7
Q ss_pred EEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 24 LIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.+++.++.+....+.+ +..|+||++||++.+. +......+.++||.|+++|+||+|.+... ....
T Consensus 153 ~~~~~~g~l~~~l~~P~~~~~~P~Vv~lhG~~~~~--------~~~~a~~La~~Gy~Vla~D~rG~~~~~~~----~~~~ 220 (446)
T 3hlk_A 153 REPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGL--------LEYRASLLAGKGFAVMALAYYNYEDLPKT----METL 220 (446)
T ss_dssp EEEEEETTEEEEEEECSSSCCBCEEEEECCSSCSC--------CCHHHHHHHTTTCEEEEECCSSSTTSCSC----CSEE
T ss_pred EEEecCCeEEEEEEeCCCCCCCCEEEEECCCCcch--------hhHHHHHHHhCCCEEEEeccCCCCCCCcc----hhhC
Confidence 3444444555544433 3568999999997653 22234566678999999999999876532 2235
Q ss_pred CHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc
Q 018916 101 SVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
.++++.+.+..+.+..++ ++++|+||||||.+|+.+|.++|+ ++++|++++........ +...... ....
T Consensus 221 ~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~-~~~~~~~------~~~~ 292 (446)
T 3hlk_A 221 HLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGT-LRYKGET------LPPV 292 (446)
T ss_dssp EHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSE-EEETTEE------ECCC
T ss_pred CHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCC-ccccCcc------CCcc
Confidence 678877777666655443 789999999999999999999998 99999998876432110 0000000 0000
Q ss_pred hhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch
Q 018916 179 GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 258 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~ 258 (349)
..... .......... .+...+...... ...+....+.++++|+|+++|++|.+++
T Consensus 293 ~~~~~---~~~~~~~~~~------------~~~~~~~~~~~~----------~~~~~~~~~~~i~~PvLii~G~~D~~vp 347 (446)
T 3hlk_A 293 GVNRN---RIKVTKDGYA------------DIVDVLNSPLEG----------PDQKSFIPVERAESTFLFLVGQDDHNWK 347 (446)
T ss_dssp CBCGG---GCEECSSSCE------------ECTTCBCCTTSG----------GGGGGBCCGGGCCSEEEEEEETTCCSSC
T ss_pred ccchh---ccccccchHH------------HHHHHHhchhhc----------cccccccCHHHCCCCEEEEEeCCCCCcC
Confidence 00000 0000000000 000000000000 0001112367789999999999999983
Q ss_pred h---HHHHHHHhccc---ceeEEEEcCCCCccc----------------------------ccChhhHHHHHHHHHhhc
Q 018916 259 E---AVHMTSKIDRR---YSALVEVQACGSMVT----------------------------EEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 259 ~---~~~~~~~~~~~---~~~~~~i~~~gH~~~----------------------------~e~p~~~~~~i~~fl~~~ 303 (349)
. .+.+.+.+... ++++++++++||.+. .+.++++.+.|.+||++.
T Consensus 348 ~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~ 426 (446)
T 3hlk_A 348 SEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKH 426 (446)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 2 34566666542 278999999999872 234677889999999986
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=150.38 Aligned_cols=181 Identities=12% Similarity=0.099 Sum_probs=125.8
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhh-----cCCeEEEEECCCCCCCCCC--------------CCCCCCCCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-----LHNFCIYHINPPGHEFGAA--------------AISDDEPVL 100 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-----~~g~~vi~~D~~G~G~s~~--------------~~~~~~~~~ 100 (349)
+..|+|||+||++.+...|. .....+. ..+++|+++|.|+++.+.. .........
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~------~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 94 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLR------MWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLE 94 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHH------HHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHH
T ss_pred CCCcEEEEEecCCCchhhHH------HHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchh
Confidence 46789999999998876632 2222332 3479999988875421100 001112235
Q ss_pred CHHHHHHHHHHHHHH-----cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 101 SVDDLADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
+++++++++..+++. ++.++++|+||||||.+|+.++.++|++++++|++++.........
T Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~-------------- 160 (239)
T 3u0v_A 95 SIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVY-------------- 160 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHH--------------
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHH--------------
Confidence 788888888888876 3567999999999999999999999999999999998765432100
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc-eEEEEeCCC
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SLIFVGESS 254 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D 254 (349)
..+ . ....++| +++++|++|
T Consensus 161 --------------------------------~~~----------------~-----------~~~~~~pp~li~~G~~D 181 (239)
T 3u0v_A 161 --------------------------------QAL----------------Q-----------KSNGVLPELFQCHGTAD 181 (239)
T ss_dssp --------------------------------HHH----------------H-----------HCCSCCCCEEEEEETTC
T ss_pred --------------------------------HHH----------------H-----------hhccCCCCEEEEeeCCC
Confidence 000 0 1122456 999999999
Q ss_pred ccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 255 PFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 255 ~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.++ +..+.+.+.+... ++++++++++||... ++..+.+.+||++.
T Consensus 182 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~ 230 (239)
T 3u0v_A 182 ELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS----KTELDILKLWILTK 230 (239)
T ss_dssp SSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----HHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC----HHHHHHHHHHHHHh
Confidence 998 4566777777632 489999999999887 34456677777765
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-19 Score=154.64 Aligned_cols=233 Identities=11% Similarity=0.052 Sum_probs=143.0
Q ss_pred ceeEEeCCCeeEEEEEccC--CCCCeEEEecCCC---CChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~---~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~ 94 (349)
+...+.+.++.+.++.+.+ ...|+||++||.+ ++... |......+.. .||.|+++|+|+.+...
T Consensus 64 ~~~~~~~~~g~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~------~~~~~~~la~~~g~~V~~~dyr~~p~~~---- 133 (326)
T 3ga7_A 64 RTCAVPTPYGDVTTRLYSPQPTSQATLYYLHGGGFILGNLDT------HDRIMRLLARYTGCTVIGIDYSLSPQAR---- 133 (326)
T ss_dssp EEEEECCTTSCEEEEEEESSSSCSCEEEEECCSTTTSCCTTT------THHHHHHHHHHHCSEEEEECCCCTTTSC----
T ss_pred EEEEeecCCCCeEEEEEeCCCCCCcEEEEECCCCcccCChhh------hHHHHHHHHHHcCCEEEEeeCCCCCCCC----
Confidence 5566677667887776654 3458999999987 44322 3333344444 59999999999875432
Q ss_pred CCCCCCCHHHHHHHHHHHHHH---cC--CCcEEEEEechhHHHHHHHHHhhhcc------cceeEEecCCCCCCChhHHh
Q 018916 95 DDEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKYRHR------VLGLILVSPLCKAPSWTEWL 163 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~------v~~lvl~~~~~~~~~~~~~~ 163 (349)
....++|..+.+..+.+. ++ .++++++|||+||.+|+.++.+++++ +++++++.+...........
T Consensus 134 ---~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~ 210 (326)
T 3ga7_A 134 ---YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRR 210 (326)
T ss_dssp ---TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHh
Confidence 123445555444444443 23 36899999999999999999998875 89999998876543221110
Q ss_pred hhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCC-CChhhhcccc
Q 018916 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR-PDISEGLRKL 242 (349)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i 242 (349)
. +.. ... ....+....+...+....... .... ......+.+.
T Consensus 211 ~-------------------------~~~-~~~----~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 253 (326)
T 3ga7_A 211 L-------------------------FGG-AWD----GLTREDLDMYEKAYLRNDEDR-------ESPWYCLFNNDLTRD 253 (326)
T ss_dssp H-------------------------CCC-TTT----TCCHHHHHHHHHHHCSSGGGG-------GCTTTSGGGSCCSSC
T ss_pred h-------------------------hcC-CCC----CCCHHHHHHHHHHhCCCCCcc-------CCcccCCCcchhhcC
Confidence 0 000 000 001111111111111000000 0000 0111233345
Q ss_pred CCceEEEEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCcccc-----cChhhHHHHHHHHHhhc
Q 018916 243 QCRSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 303 (349)
..|+++++|+.|++++....+.+.+... .++++++++++|.... ++.+++.+.+.+||++.
T Consensus 254 ~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 321 (326)
T 3ga7_A 254 VPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMAR 321 (326)
T ss_dssp CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCcCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHH
Confidence 6799999999999997777777777653 3799999999997754 34578899999999875
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.1e-20 Score=159.91 Aligned_cols=219 Identities=12% Similarity=0.107 Sum_probs=139.9
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-CC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GL 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l-~~ 118 (349)
+++++|||+||++++... |... ...+..+|+|+++|+||||.+.. ...+++++++++.+.+..+ +.
T Consensus 99 g~~~~l~~lhg~~~~~~~------~~~l-~~~L~~~~~v~~~d~~g~~~~~~------~~~~~~~~a~~~~~~i~~~~~~ 165 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAWQ------FSVL-SRYLDPQWSIIGIQSPRPNGPMQ------TAANLDEVCEAHLATLLEQQPH 165 (329)
T ss_dssp CSSCEEEEECCTTSCCGG------GGGG-GGTSCTTCEEEEECCCTTTSHHH------HCSSHHHHHHHHHHHHHHHCSS
T ss_pred CCCCcEEEEeCCcccchH------HHHH-HHhcCCCCeEEEeeCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCC
Confidence 367899999999988654 3222 35567899999999999987542 2368999999988777665 56
Q ss_pred CcEEEEEechhHHHHHHHHHh---hhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc-hhHH--HHHHHhhccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC-GVVK--ELLLKRYFSK 192 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 192 (349)
++++|+||||||.+|+++|.+ +|++|.+++++++..... ..+.... ..... .... ......++..
T Consensus 166 ~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 236 (329)
T 3tej_A 166 GPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPET--QNWQEKE-------ANGLDPEVLAEINREREAFLAA 236 (329)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHH--HHTC------------CCCCTHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCc--ccccccc-------ccccChhhHHHHHHHHHHHHHh
Confidence 799999999999999999998 999999999999876531 0000000 00000 0000 0001111111
Q ss_pred ccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhccc
Q 018916 193 QEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 270 (349)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~ 270 (349)
... ....+....+... +......+..+ ....+++|++++.|++|... +....+.+..++
T Consensus 237 -~~~----~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~- 297 (329)
T 3tej_A 237 -QQG----STSTELFTTIEGN--------YADAVRLLTTA-----HSVPFDGKATLFVAERTLQEGMSPERAWSPWIAE- 297 (329)
T ss_dssp -TCC----CSCCHHHHHHHHH--------HHHHHHHHTTC-----CCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEE-
T ss_pred -ccc----cccHHHHHHHHHH--------HHHHHHHHhcC-----CCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCC-
Confidence 000 0122222222221 11111222221 13467899999999999876 333445555554
Q ss_pred ceeEEEEcCCCCcccccCh--hhHHHHHHHHHh
Q 018916 271 YSALVEVQACGSMVTEEQP--HAMLIPMEYFLM 301 (349)
Q Consensus 271 ~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 301 (349)
.+++.++ +||+.+++.| +++++.|.+||+
T Consensus 298 -~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 298 -LDIYRQD-CAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp -EEEEEES-SCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred -cEEEEec-CChHHhCCChHHHHHHHHHHHHhc
Confidence 8999997 9999888877 789999999985
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-20 Score=151.01 Aligned_cols=185 Identities=12% Similarity=0.082 Sum_probs=126.5
Q ss_pred CeeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCC---CCCCCC--CCCCCCC
Q 018916 29 HGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF---GAAAIS--DDEPVLS 101 (349)
Q Consensus 29 ~~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~---s~~~~~--~~~~~~~ 101 (349)
+..++|....+ +.+|+|||+||++++... |... ...+.++|.|+++|.+++.. +..... ......+
T Consensus 15 ~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~------~~~~-~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 15 DLAFPYRLLGAGKESRECLFLLHGSGVDETT------LVPL-ARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSSCEEEESTTSSCCCEEEEECCTTBCTTT------THHH-HHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCCceEEEeCCCCCCCCEEEEEecCCCCHHH------HHHH-HHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 44566666554 356899999999888654 3232 34455699999999887521 110000 0011224
Q ss_pred HHHHHHHHHHHHHHc----CC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 102 VDDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
+.+.++++.++++.+ ++ ++++++|||+||.+|+.++.++|+++++++++++.....
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------ 149 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------ 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc------------------
Confidence 455566666666443 44 789999999999999999999999999999999865321
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
. . .....+++|+++++|++|.
T Consensus 150 ----------------~----------~---------------------------------~~~~~~~~P~li~~G~~D~ 170 (223)
T 3b5e_A 150 ----------------H----------V---------------------------------PATDLAGIRTLIIAGAADE 170 (223)
T ss_dssp ----------------S----------C---------------------------------CCCCCTTCEEEEEEETTCT
T ss_pred ----------------c----------c---------------------------------ccccccCCCEEEEeCCCCC
Confidence 0 0 0012357899999999999
Q ss_pred cc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 256 FH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++ +..+ +.+.+... ++++++++ +||....+. .+.+.+||++.
T Consensus 171 ~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~----~~~i~~~l~~~ 216 (223)
T 3b5e_A 171 TYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPD----AAIVRQWLAGP 216 (223)
T ss_dssp TTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHH----HHHHHHHHHCC
T ss_pred cCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHH----HHHHHHHHHhh
Confidence 97 5566 77777642 38899999 999886443 35778888764
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=174.33 Aligned_cols=230 Identities=11% Similarity=0.102 Sum_probs=148.5
Q ss_pred ceeEEeCCCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccc-hhhhhhh-cCCeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-PEACSLL-LHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~-~~~~~~l-~~g~~vi~~D~~G~G~s~~~ 92 (349)
+...+...+.++++..+.+. ..|+||++||++.+.... . . |. .....++ .+||.|+++|+||+|.+...
T Consensus 469 ~~~~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~-~-~-~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~ 545 (719)
T 1z68_A 469 EIKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVR-S-V-FAVNWISYLASKEGMVIALVDGRGTAFQGDK 545 (719)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCC-C-C-CCCCHHHHHHHTTCCEEEEEECTTBSSSCHH
T ss_pred EEEEEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCccc-c-c-chhhHHHHHHhcCCeEEEEEcCCCCCCCchh
Confidence 34455565678888776543 346899999998764211 0 1 21 1223444 68999999999999986532
Q ss_pred CC----CCCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 93 IS----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 93 ~~----~~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
.. .......++++.+.+..+.+. ++.++++++||||||.+++.+|.++|++++++|++++.........
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~----- 620 (719)
T 1z68_A 546 LLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYAS----- 620 (719)
T ss_dssp HHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBH-----
T ss_pred hHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcc-----
Confidence 10 001112345555555555442 2236899999999999999999999999999999998765322100
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC-c
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-R 245 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P 245 (349)
.....++.... ..+..+.+.. .+....+.++++ |
T Consensus 621 -----------------~~~~~~~g~~~--------~~~~~~~~~~--------------------~~~~~~~~~~~~~P 655 (719)
T 1z68_A 621 -----------------VYTERFMGLPT--------KDDNLEHYKN--------------------STVMARAEYFRNVD 655 (719)
T ss_dssp -----------------HHHHHHHCCSS--------TTTTHHHHHH--------------------TCSGGGGGGGTTSE
T ss_pred -----------------ccchhhcCCcc--------cccchhhhhh--------------------CCHhHHHhcCCCCc
Confidence 01111222100 0000011100 123345667787 8
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+|+++|++|..+ ...+.+.+.++.. ..++++++++||....++++++.+.|.+||++.
T Consensus 656 ~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 717 (719)
T 1z68_A 656 YLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQC 717 (719)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHh
Confidence 999999999988 5667787777653 367999999999997677899999999999864
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-19 Score=152.14 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=79.9
Q ss_pred cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 018916 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (349)
Q Consensus 38 g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~ 117 (349)
+.+++++|||+||++++... |... ...+. ++|+++|+++.. ..++++++++++.++++.++
T Consensus 20 ~~~~~~~l~~~hg~~~~~~~------~~~~-~~~L~--~~v~~~d~~~~~----------~~~~~~~~a~~~~~~i~~~~ 80 (283)
T 3tjm_A 20 VQSSERPLFLVHPIEGSTTV------FHSL-ASRLS--IPTYGLQCTRAA----------PLDSIHSLAAYYIDCIRQVQ 80 (283)
T ss_dssp CCSSSCCEEEECCTTCCSGG------GHHH-HHHCS--SCEEEECCCTTS----------CCSCHHHHHHHHHHHHTTTC
T ss_pred CCCCCCeEEEECCCCCCHHH------HHHH-HHhcC--ceEEEEecCCCC----------CCCCHHHHHHHHHHHHHHhC
Confidence 33467899999999988755 4333 34444 999999997531 23799999999999998886
Q ss_pred C-CcEEEEEechhHHHHHHHHHhh---hcccc---eeEEecCCCC
Q 018916 118 L-GAVMCMGVTAGAYILTLFAMKY---RHRVL---GLILVSPLCK 155 (349)
Q Consensus 118 ~-~~v~lvGhS~Gg~ia~~~a~~~---p~~v~---~lvl~~~~~~ 155 (349)
. ++++|+||||||.+|+++|.++ |+++. +++++++...
T Consensus 81 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 81 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 4 7899999999999999999976 88899 9999998654
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-20 Score=157.36 Aligned_cols=203 Identities=10% Similarity=0.055 Sum_probs=129.7
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHc
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL---NHF 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l---~~l 116 (349)
+..|+|||+||.+....... .|......+.++||.|+++|+||+|.+.. ....++..+.+..+. +.+
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~---~~~~~~~~l~~~G~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~l~~~~~~~ 149 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMS---MSCSIVGPLVRRGYRVAVMDYNLCPQVTL-------EQLMTQFTHFLNWIFDYTEMT 149 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGG---GSCTTHHHHHHTTCEEEEECCCCTTTSCH-------HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcCcCCChh---HHHHHHHHHHhCCCEEEEecCCCCCCCCh-------hHHHHHHHHHHHHHHHHhhhc
Confidence 46789999999653322211 13344456678899999999999976321 122333333333332 466
Q ss_pred CCCcEEEEEechhHHHHHHHHHhhh-------cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhh
Q 018916 117 GLGAVMCMGVTAGAYILTLFAMKYR-------HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (349)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (349)
+.++++|+|||+||.+++.++.+.+ ++++++|++++......... .... .....
T Consensus 150 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~--------------~~~~-----~~~~~ 210 (303)
T 4e15_A 150 KVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSN--------------LESV-----NPKNI 210 (303)
T ss_dssp TCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHT--------------CTTT-----SGGGT
T ss_pred CCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhc--------------cccc-----chhhh
Confidence 7789999999999999999988543 47999999998765421000 0000 00001
Q ss_pred cccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcc----ccCCceEEEEeCCCccc--hhHHHH
Q 018916 190 FSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR----KLQCRSLIFVGESSPFH--SEAVHM 263 (349)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~Pvlii~g~~D~~~--~~~~~~ 263 (349)
+.. ..+.. .........+. .+++|+|+++|++|.++ ..++.+
T Consensus 211 ~~~----------~~~~~----------------------~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~ 258 (303)
T 4e15_A 211 LGL----------NERNI----------------------ESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHY 258 (303)
T ss_dssp TCC----------CTTTT----------------------TTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHH
T ss_pred hcC----------CHHHH----------------------HHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHH
Confidence 111 00000 00000111222 34899999999999977 667778
Q ss_pred HHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 264 TSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 264 ~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.++.. +++++++++++|+.++++.......+.+||.+.
T Consensus 259 ~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 259 ADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp HHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred HHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 8887643 479999999999999999999988888888653
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=148.95 Aligned_cols=194 Identities=11% Similarity=0.128 Sum_probs=129.1
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCC---eEEEEECCCCCCCCC--CCCCC-------------CCCCC-C
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN---FCIYHINPPGHEFGA--AAISD-------------DEPVL-S 101 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g---~~vi~~D~~G~G~s~--~~~~~-------------~~~~~-~ 101 (349)
.+++|||+||++++... |...+..+.+++ ++|+.+|.+++|.+. ..... +...| +
T Consensus 3 ~~~pvv~iHG~~~~~~~------~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~ 76 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNR------FDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKAN 76 (250)
T ss_dssp SCCCEEEECCCGGGHHH------HHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHH
T ss_pred CCCCEEEECCCCCCHHH------HHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccC
Confidence 46789999999988766 444445555555 789988888887531 10000 00112 6
Q ss_pred HHHHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHhh-----hcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 102 VDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
+++.++++.++++.+ +.++++++||||||.+++.|+.++ +++|+++|+++++.......
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~------------ 144 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS------------ 144 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc------------
Confidence 788888888888776 889999999999999999999987 56899999999876542110
Q ss_pred HhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
. .. .....+.+. . ....+.+ ++|+++|+|+
T Consensus 145 -------------------~-~~-------~~~~~~~l~---------------~-------~~~~lp~-~vpvl~I~G~ 174 (250)
T 3lp5_A 145 -------------------T-TA-------KTSMFKELY---------------R-------YRTGLPE-SLTVYSIAGT 174 (250)
T ss_dssp -------------------S-SC-------CCHHHHHHH---------------H-------TGGGSCT-TCEEEEEECC
T ss_pred -------------------c-cc-------cCHHHHHHH---------------h-------ccccCCC-CceEEEEEec
Confidence 0 00 000111110 0 0122222 6899999999
Q ss_pred ----CCccc--hhHHHHHHHhcccc--eeEEEEc--CCCCcccccChhhHHHHHHHHHhhc
Q 018916 253 ----SSPFH--SEAVHMTSKIDRRY--SALVEVQ--ACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 253 ----~D~~~--~~~~~~~~~~~~~~--~~~~~i~--~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.|.++ ..++.+...+++.. .+.+.+. +++|..+.++| ++++.|.+||.+.
T Consensus 175 ~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~ 234 (250)
T 3lp5_A 175 ENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLAE 234 (250)
T ss_dssp CCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSCC
T ss_pred CCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhcc
Confidence 89888 34444555555422 2233343 57799999988 8999999999764
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-18 Score=143.45 Aligned_cols=245 Identities=8% Similarity=-0.020 Sum_probs=132.7
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
+...++..+.++.......|+||++||+|....+.. .++......+.+.||+|+++|+|+.+. ..+.
T Consensus 9 ~~~~~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~~~--~~~~~~~~~l~~~g~~Vi~vdYrlaPe-----------~~~p 75 (274)
T 2qru_A 9 QTLANGATVTIYPTTTEPTNYVVYLHGGGMIYGTKS--DLPEELKELFTSNGYTVLALDYLLAPN-----------TKID 75 (274)
T ss_dssp EECTTSCEEEEECCSSSSCEEEEEECCSTTTSCCGG--GCCHHHHHHHHTTTEEEEEECCCCTTT-----------SCHH
T ss_pred ccccCCeeEEEEcCCCCCCcEEEEEeCccccCCChh--hchHHHHHHHHHCCCEEEEeCCCCCCC-----------CCCc
Confidence 333455566655432245689999999873322211 112122333446699999999998632 2455
Q ss_pred HHHHHHHHHHHHc----C-CCcEEEEEechhHHHHHHHHHh---hhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 104 DLADQIAEVLNHF----G-LGAVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 104 ~~~~~l~~~l~~l----~-~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
...+|+.++++.+ . .++++|+|+|+||.+|+.++.+ .+.++++++++.+..... ..... .. .
T Consensus 76 ~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~-~~~~~---~~---~--- 145 (274)
T 2qru_A 76 HILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLE-FIKEP---RK---L--- 145 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSG-GGGSC---CC---S---
T ss_pred HHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccccc-ccCCc---hh---h---
Confidence 5566655555444 3 6899999999999999999873 466899999987755411 00000 00 0
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCC-----CCh-hhhccccCCceEEE
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR-----PDI-SEGLRKLQCRSLIF 249 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~l~~i~~Pvlii 249 (349)
....... .....++........ ............ .....+. .+...... ... ...+..+ .|++++
T Consensus 146 ~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~ 216 (274)
T 2qru_A 146 LKQAISA-KEIAAIDQTKPVWDD--PFLSRYLLYHYS----IQQALLP-HFYGLPENGDWSAYALSDETLKTF-PPCFST 216 (274)
T ss_dssp CSSCCCS-GGGTTSCCSSCCSCC--TTCTTHHHHHHH----HHTTCHH-HHHTCCTTSCCGGGCCCHHHHHTS-CCEEEE
T ss_pred ccccccH-HHHhhhcccCCCCCC--ccccchhhhhhh----hhhcchh-hccCcccccccccCCCChhhhcCC-CCEEEE
Confidence 0000000 000000000000000 000000000000 0000000 00000000 001 1234566 799999
Q ss_pred EeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChh----hHHHHHHHHHhh
Q 018916 250 VGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH----AMLIPMEYFLMG 302 (349)
Q Consensus 250 ~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 302 (349)
+|+.|+.+ ..++.+.+.+++ ++++++++++|.++.+.+. ++.+.+.+||++
T Consensus 217 ~G~~D~~~~~~~~~~l~~~~~~--~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 217 ASSSDEEVPFRYSKKIGRTIPE--STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp EETTCSSSCTHHHHHHHHHSTT--CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred EecCCCCcCHHHHHHHHHhCCC--cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 99999987 466778888887 8999999999988766544 457778888875
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-18 Score=149.30 Aligned_cols=233 Identities=11% Similarity=0.008 Sum_probs=137.6
Q ss_pred EEeCCCeeEEEEEc-cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 24 LIKTSHGSLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 24 ~i~~~~~~l~~~~~-g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
.+...+..+.++.. +....|+||++||.+........ |......+.. .||.|+++|+|+.+... ....
T Consensus 61 ~~~~~~i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~~---~~~~~~~la~~~g~~vv~~dyr~~p~~~-------~~~~ 130 (322)
T 3fak_A 61 QVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINT---HRSMVGEISRASQAAALLLDYRLAPEHP-------FPAA 130 (322)
T ss_dssp EEEETTEEEEEEECTTCCTTCEEEEECCSTTTSCCHHH---HHHHHHHHHHHHTSEEEEECCCCTTTSC-------TTHH
T ss_pred EEeeCCeEEEEEeCCCCCCccEEEEEcCCccccCChHH---HHHHHHHHHHhcCCEEEEEeCCCCCCCC-------CCcH
Confidence 33444444443332 33457899999997632111110 2233344444 49999999999875432 2245
Q ss_pred HHHHHHHHHHHHHH-cCCCcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhHHhhhhhhhHHHHhcC
Q 018916 102 VDDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (349)
Q Consensus 102 ~~~~~~~l~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (349)
++|..+.+..+.+. ++.++++|+|||+||.+|+.++.+.+++ ++++++++|............
T Consensus 131 ~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~------------ 198 (322)
T 3fak_A 131 VEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFK------------ 198 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHH------------
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHH------------
Confidence 67777777766666 4556899999999999999999998876 999999999876432111000
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
...... .+ ........+...+....... ..........+.. ..|+|+++|+.|.+
T Consensus 199 ----------~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~-------~~~~sp~~~~~~~-~pP~li~~g~~D~~ 253 (322)
T 3fak_A 199 ----------TRAEAD-PM------VAPGGINKMAARYLNGADAK-------HPYASPNFANLKG-LPPLLIHVGRDEVL 253 (322)
T ss_dssp ----------HTTTTC-CS------CCSSHHHHHHHHHHTTSCTT-------CTTTCGGGSCCTT-CCCEEEEEETTSTT
T ss_pred ----------HhCccC-cc------cCHHHHHHHHHHhcCCCCCC-------CcccCCCcccccC-CChHhEEEcCcCcc
Confidence 000000 00 01111111111111000000 0000001111222 24999999999998
Q ss_pred chhHHHHHHHhccc--ceeEEEEcCCCCcccc-----cChhhHHHHHHHHHhhc
Q 018916 257 HSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 257 ~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 303 (349)
++....+.+.+... .++++++++++|.... +..+++.+.+.+||++.
T Consensus 254 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3fak_A 254 LDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQ 307 (322)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHH
Confidence 87777777777653 3799999999997663 34678889999999875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=9.3e-19 Score=168.45 Aligned_cols=226 Identities=12% Similarity=0.113 Sum_probs=147.5
Q ss_pred EEeCCCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccc-hhhhhhh-cCCeEEEEECCCCCCCCCCCCC-
Q 018916 24 LIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-PEACSLL-LHNFCIYHINPPGHEFGAAAIS- 94 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~-~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~- 94 (349)
.+..+|..+.+..+.|. ..|+||++||.+.+.... . . |. .....++ .+||.|+++|+||+|.+.....
T Consensus 478 ~~~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~-~-~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~ 554 (740)
T 4a5s_A 478 FIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKAD-T-V-FRLNWATYLASTENIIVASFDGRGSGYQGDKIMH 554 (740)
T ss_dssp EEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCC-C-C-CCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHG
T ss_pred EEccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccc-c-c-cCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHH
Confidence 34457778888877653 247999999987663211 0 0 11 1223444 4899999999999986542110
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHcC---CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh
Q 018916 95 ---DDEPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 95 ---~~~~~~~~~~~~~~l~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
.......++++.+.+..+. ..+ .+++.++||||||++++.+|.++|++++++++++|.......
T Consensus 555 ~~~~~~~~~~~~D~~~~i~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~--------- 624 (740)
T 4a5s_A 555 AINRRLGTFEVEDQIEAARQFS-KMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY--------- 624 (740)
T ss_dssp GGTTCTTSHHHHHHHHHHHHHH-TSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS---------
T ss_pred HHHhhhCcccHHHHHHHHHHHH-hcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHh---------
Confidence 1111234566666555554 333 268999999999999999999999999999999987642110
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC-ceE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSL 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl 247 (349)
.. .....++.. .. ..+..+.+.. .+....+.++++ |+|
T Consensus 625 ---------~~----~~~~~~~~~-p~-------~~~~~~~~~~--------------------~~~~~~~~~i~~~P~L 663 (740)
T 4a5s_A 625 ---------DS----VYTERYMGL-PT-------PEDNLDHYRN--------------------STVMSRAENFKQVEYL 663 (740)
T ss_dssp ---------BH----HHHHHHHCC-SS-------TTTTHHHHHH--------------------SCSGGGGGGGGGSEEE
T ss_pred ---------hh----HHHHHHcCC-CC-------ccccHHHHHh--------------------CCHHHHHhcCCCCcEE
Confidence 00 111222221 00 0001111110 223345667776 999
Q ss_pred EEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcc-cccChhhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMV-TEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 303 (349)
+++|++|..+ ..+..+.+.+... ..+++++++++|.+ ..+.++++.+.+.+||++.
T Consensus 664 ii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 724 (740)
T 4a5s_A 664 LIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQC 724 (740)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 9999999988 5667777777643 36899999999998 5578899999999999986
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=174.70 Aligned_cols=228 Identities=12% Similarity=0.132 Sum_probs=147.0
Q ss_pred ceeEEeCCCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccc-hhhhhhh-cCCeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFC-PEACSLL-LHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~-~~~~~~l-~~g~~vi~~D~~G~G~s~~~ 92 (349)
+...+.+.++.+.+..+.+. ..|+||++||++.+.... . . |. .....++ ++||.|+++|+||+|.+...
T Consensus 469 ~~~~~~~~~g~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-~-~-~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~ 545 (723)
T 1xfd_A 469 EYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVA-E-K-FEVSWETVMVSSHGAVVVKCDGRGSGFQGTK 545 (723)
T ss_dssp CBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCC-C-C-CCCSHHHHHHHTTCCEEECCCCTTCSSSHHH
T ss_pred eEEEEEcCCceEEEEEEeCCCCCCCCccCEEEEEcCCCCccccC-c-c-ccccHHHHHhhcCCEEEEEECCCCCccccHH
Confidence 44455555557777666543 347899999987653110 0 0 11 1223344 47999999999999874210
Q ss_pred ----CCCCCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhh----hcccceeEEecCCCCCCChhHH
Q 018916 93 ----ISDDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEW 162 (349)
Q Consensus 93 ----~~~~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~ 162 (349)
.........++++.+.+..+.+. ++.++++++||||||.+++.+|.++ |+++++++++++........
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-- 623 (723)
T 1xfd_A 546 LLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA-- 623 (723)
T ss_dssp HHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB--
T ss_pred HHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhh--
Confidence 01111224566666666665443 2346899999999999999999999 99999999999876532210
Q ss_pred hhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc
Q 018916 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 242 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (349)
. .+...++.. ... ..+ .+ ...+....+.++
T Consensus 624 ----------------~----~~~~~~~~~-~~~------~~~-------~~----------------~~~~~~~~~~~~ 653 (723)
T 1xfd_A 624 ----------------S----AFSERYLGL-HGL------DNR-------AY----------------EMTKVAHRVSAL 653 (723)
T ss_dssp ----------------H----HHHHHHHCC-CSS------CCS-------ST----------------TTTCTHHHHTSC
T ss_pred ----------------h----hccHhhcCC-ccC------Chh-------HH----------------HhcChhhHHhhc
Confidence 0 011111111 000 000 00 001223445677
Q ss_pred C-CceEEEEeCCCccc--hhHHHHHHHhcc--cceeEEEEcCCCCcc-cccChhhHHHHHHHHHhhc
Q 018916 243 Q-CRSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVQACGSMV-TEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 243 ~-~Pvlii~g~~D~~~--~~~~~~~~~~~~--~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 303 (349)
+ +|+|+++|++|..+ ...+.+.+.+.. .++++++++++||.+ +.++++++.+.+.+||++.
T Consensus 654 ~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 654 EEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 720 (723)
T ss_dssp CSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHH
Confidence 8 89999999999998 566677777753 247999999999998 5688999999999999864
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-18 Score=144.99 Aligned_cols=202 Identities=10% Similarity=0.057 Sum_probs=119.0
Q ss_pred ceeEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~ 97 (349)
+...++.+|.+|....+-| +..|.||++||++.+..... +......+.++||.|+++|+||||.+........
T Consensus 32 ~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~----~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~ 107 (259)
T 4ao6_A 32 RGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEY----IEQVAKLLVGRGISAMAIDGPGHGERASVQAGRE 107 (259)
T ss_dssp EEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CH----HHHHHHHHHHTTEEEEEECCCC------------
T ss_pred EEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchH----HHHHHHHHHHCCCeEEeeccCCCCCCCCcccccc
Confidence 4445666888887665533 45578999999987643211 1133456778999999999999998753221110
Q ss_pred C-----C----------CCHHHHHHHHHH----HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC
Q 018916 98 P-----V----------LSVDDLADQIAE----VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (349)
Q Consensus 98 ~-----~----------~~~~~~~~~l~~----~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (349)
. . ........+... +....+.+++.++|+|+||.+++.++...|. +++.++..+......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~~ 186 (259)
T 4ao6_A 108 PTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGVN 186 (259)
T ss_dssp -CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTSTT
T ss_pred cchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccccc
Confidence 0 0 011122223222 2334567899999999999999999998875 666554333211100
Q ss_pred hhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhh
Q 018916 159 WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEG 238 (349)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (349)
.. +..+.
T Consensus 187 --------------------------------------------~~-----------------------------~~~~~ 193 (259)
T 4ao6_A 187 --------------------------------------------GE-----------------------------DLVRL 193 (259)
T ss_dssp --------------------------------------------HH-----------------------------HHHHH
T ss_pred --------------------------------------------cc-----------------------------chhhh
Confidence 00 00112
Q ss_pred ccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 239 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 239 l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
..+|++|+|+++|++|.++ +.+.++.+.+...+.++++++ ++|... ...+..+.+.+||++.
T Consensus 194 a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~-G~H~~~--p~~e~~~~~~~fl~~h 257 (259)
T 4ao6_A 194 APQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNP-GKHSAV--PTWEMFAGTVDYLDQR 257 (259)
T ss_dssp GGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEES-SCTTCC--CHHHHTHHHHHHHHHH
T ss_pred hccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeC-CCCCCc--CHHHHHHHHHHHHHHh
Confidence 3467899999999999999 677788999987667888887 466432 2345667788898864
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-18 Score=165.17 Aligned_cols=233 Identities=11% Similarity=0.036 Sum_probs=144.6
Q ss_pred ceeEEeC-CCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
+...+.. +|.++.+..+.+ +..|+||++||........ .|......++++||.|+++|+||+|.+...+
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 493 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEA----NFRSSILPWLDAGGVYAVANLRGGGEYGKAW 493 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCC----CCCGGGHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCC----CcCHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 4445555 556787765432 3568999999976554321 1333445677899999999999998654211
Q ss_pred CCC----CCCCCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh
Q 018916 94 SDD----EPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 94 ~~~----~~~~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
... .....++|+.+.+..+++.- +.++++++|||+||++++.++.++|++++++|+..+..........
T Consensus 494 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~----- 568 (695)
T 2bkl_A 494 HDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLF----- 568 (695)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS-----
T ss_pred HHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcccc-----
Confidence 000 11123455555555444432 3468999999999999999999999999999999987654321100
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC--Cc
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ--CR 245 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P 245 (349)
..... ....+-.+ . .++..+.+ ..+ +....+.+++ .|
T Consensus 569 --------~~~~~----~~~~~g~~-~--------~~~~~~~~----------------~~~----sp~~~~~~~~~~~P 607 (695)
T 2bkl_A 569 --------GSGRT----WIPEYGTA-E--------KPEDFKTL----------------HAY----SPYHHVRPDVRYPA 607 (695)
T ss_dssp --------TTGGG----GHHHHCCT-T--------SHHHHHHH----------------HHH----CGGGCCCSSCCCCE
T ss_pred --------CCCcc----hHHHhCCC-C--------CHHHHHHH----------------Hhc----ChHhhhhhcCCCCC
Confidence 00000 00111111 0 11111111 111 1122334444 69
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcc-----cceeEEEEcCCCCccc--ccChhhHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDR-----RYSALVEVQACGSMVT--EEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~--~e~p~~~~~~i~~fl~~~ 303 (349)
+|+++|++|..+ .....+.+.+.. ..+++++++++||... .+++.++.+.+.+||.+.
T Consensus 608 ~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 674 (695)
T 2bkl_A 608 LLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQV 674 (695)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999988 567778887754 3478999999999874 355677888899999875
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-18 Score=148.97 Aligned_cols=211 Identities=16% Similarity=0.153 Sum_probs=132.8
Q ss_pred eEEEecC--CCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-CCCc
Q 018916 44 ALVTYPD--LALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLGA 120 (349)
Q Consensus 44 ~vv~lHG--~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~ 120 (349)
+++|+|| ++++... |... ...+..+++|+++|+||+|.+..+. ......+++++++++.+.++.+ ..++
T Consensus 91 ~l~~~hg~g~~~~~~~------~~~l-~~~L~~~~~v~~~d~~G~g~~~~~~-~~~~~~~~~~~a~~~~~~i~~~~~~~p 162 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHE------FLRL-STSFQEERDFLAVPLPGYGTGTGTG-TALLPADLDTALDAQARAILRAAGDAP 162 (319)
T ss_dssp EEEEECCCCTTCSTTT------THHH-HHTTTTTCCEEEECCTTCCBC---C-BCCEESSHHHHHHHHHHHHHHHHTTSC
T ss_pred cEEEeCCCCCCCcHHH------HHHH-HHhcCCCCceEEecCCCCCCCcccc-cCCCCCCHHHHHHHHHHHHHHhcCCCC
Confidence 9999998 4444322 3233 4556789999999999999862100 0123579999999999998776 4678
Q ss_pred EEEEEechhHHHHHHHHHhhh----cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccccccc
Q 018916 121 VMCMGVTAGAYILTLFAMKYR----HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVR 196 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
++++||||||.+|+++|.+++ ++|++++++++........ . ..+.. .+.+......+.+ .
T Consensus 163 ~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~--~--~~~~~---------~l~~~~~~~~~~~-~-- 226 (319)
T 2hfk_A 163 VVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP--I--EVWSR---------QLGEGLFAGELEP-M-- 226 (319)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH--H--HHTHH---------HHHHHHHHTCSSC-C--
T ss_pred EEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH--H--HHHHH---------HhhHHHHHhhccc-c--
Confidence 999999999999999999875 4599999999876543210 0 00000 0011111111111 0
Q ss_pred CCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch--h-HHHHHHHhccccee
Q 018916 197 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E-AVHMTSKIDRRYSA 273 (349)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~--~-~~~~~~~~~~~~~~ 273 (349)
.......+ ..+...+.. . ....+++|+++++| +|.+++ . ...+.+.+++ +.+
T Consensus 227 ------~~~~~~~~------------~~~~~~~~~-~----~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~-~~~ 281 (319)
T 2hfk_A 227 ------SDARLLAM------------GRYARFLAG-P----RPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDL-PHT 281 (319)
T ss_dssp ------CHHHHHHH------------HHHHHHHHS-C----CCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSS-CSE
T ss_pred ------chHHHHHH------------HHHHHHHHh-C----CCCCcCCCEEEEEc-CCCCCCccccccchhhcCCC-CCE
Confidence 11111100 011111111 1 13678999999999 898772 2 2233333332 378
Q ss_pred EEEEcCCCCcccc-cChhhHHHHHHHHHhhcc
Q 018916 274 LVEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 274 ~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 304 (349)
++.++ +||+.++ ++++++++.|.+||++..
T Consensus 282 ~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 282 VADVP-GDHFTMMRDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp EEEES-SCTTHHHHTCHHHHHHHHHHHHHHHH
T ss_pred EEEeC-CCcHHHHHHhHHHHHHHHHHHHHhcC
Confidence 89998 7999765 899999999999998753
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=166.63 Aligned_cols=233 Identities=8% Similarity=0.005 Sum_probs=141.0
Q ss_pred ceeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
++..+.. +|.++.+..+.+ +..|+||++||.+.....+ .|......++++||.|+++|+||+|.+...+..
T Consensus 462 ~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~ 537 (741)
T 1yr2_A 462 EQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTP----WFSAGFMTWIDSGGAFALANLRGGGEYGDAWHD 537 (741)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCC----CCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHH
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCC----CcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHH
Confidence 4445555 566787776543 3578999999987654321 133444567789999999999999876321110
Q ss_pred C----CCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhh
Q 018916 96 D----EPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 96 ~----~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
. .....++|+++.+..+++. .+.++++++|||+||++++.++.++|++++++|+..+.........
T Consensus 538 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~-------- 609 (741)
T 1yr2_A 538 AGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQ-------- 609 (741)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGG--------
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccC--------
Confidence 0 0112366666666666654 2447899999999999999999999999999999998765432110
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc-cCC-ceE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQC-RSL 247 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-Pvl 247 (349)
....... ...+-.+ ..++..+.+ .. .+....+.. +++ |+|
T Consensus 610 -----~~~~~~~----~~~~g~~---------~~~~~~~~~-------------------~~-~sp~~~~~~~~~~~P~L 651 (741)
T 1yr2_A 610 -----FTAGRYW----VDDYGYP---------EKEADWRVL-------------------RR-YSPYHNVRSGVDYPAIL 651 (741)
T ss_dssp -----STTGGGG----HHHHCCT---------TSHHHHHHH-------------------HT-TCGGGCCCTTSCCCEEE
T ss_pred -----CCCCchh----HHHcCCC---------CCHHHHHHH-------------------HH-cCchhhhhccCCCCCEE
Confidence 0000000 0011011 011111111 11 122234454 775 999
Q ss_pred EEEeCCCccc--hhHHHHHHHhcc-----cceeEEEEcCCCCccccc--ChhhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDR-----RYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~~ 303 (349)
+++|++|..+ ....++.+.++. ..+++++++++||..... +..++.+.+.+||.+.
T Consensus 652 i~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 652 VTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHF 716 (741)
T ss_dssp EEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999988 566677777764 237889999999987663 3457888999999875
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=146.89 Aligned_cols=218 Identities=10% Similarity=0.065 Sum_probs=133.5
Q ss_pred CCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCC-----
Q 018916 28 SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDD----- 96 (349)
Q Consensus 28 ~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~----- 96 (349)
.+..+.+..+-|+ ..|+||++||++.+...|..... +..++ ..||.|+++|+||+|.|.......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~----~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~ 100 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGE----YRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGK 100 (278)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSC----CHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBT
T ss_pred cCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhccc----HHHHHhhCCeEEEecCCcccCcccccccccccccC
Confidence 5666777666542 44799999999888766533211 12333 349999999999999875322000
Q ss_pred -------------CCCCC-HHHHHHHHHHHHHHc-CC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh
Q 018916 97 -------------EPVLS-VDDLADQIAEVLNHF-GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (349)
Q Consensus 97 -------------~~~~~-~~~~~~~l~~~l~~l-~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (349)
...+. .+.+++++..+++.. +. ++++++||||||.+|+.+|.++|++++++++++|.......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 180 (278)
T 3e4d_A 101 GAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSA 180 (278)
T ss_dssp TBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGC
T ss_pred CccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCC
Confidence 01112 334456677777644 66 78999999999999999999999999999999987653210
Q ss_pred hHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhc
Q 018916 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL 239 (349)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (349)
. + . ......++.. . ... +... .........
T Consensus 181 ~-~---------------~----~~~~~~~~~~-~---------~~~-------~~~~---~~~~~~~~~---------- 210 (278)
T 3e4d_A 181 D-W---------------S----EPALEKYLGA-D---------RAA-------WRRY---DACSLVEDG---------- 210 (278)
T ss_dssp T-T---------------T----HHHHHHHHCS-C---------GGG-------GGGG---CHHHHHHTT----------
T ss_pred c-c---------------c----hhhHHHhcCC-c---------HHH-------HHhc---ChhhHhhcC----------
Confidence 0 0 0 0011122222 0 000 0000 000101100
Q ss_pred cccCCceEEEEeCCCccchh---HHHHHHHhcccc--eeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 240 RKLQCRSLIFVGESSPFHSE---AVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 240 ~~i~~Pvlii~g~~D~~~~~---~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+..+|+++++|++|.+++. .+.+.+.+...+ ++++++++++|.... .+...+.+.+|+.+
T Consensus 211 -~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~ 275 (278)
T 3e4d_A 211 -ARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYYF--ISTFMDDHLKWHAE 275 (278)
T ss_dssp -CCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred -CCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHHH--HHHHHHHHHHHHHH
Confidence 1357999999999999854 567777776533 689999999996543 22344444555544
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=166.23 Aligned_cols=233 Identities=7% Similarity=-0.010 Sum_probs=146.2
Q ss_pred ceeEEeC-CCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~ 92 (349)
++..+.. +|.++.+..+.+ +..|+||++||.+.....+ .|......+++ +||.|+++|+||+|.+...
T Consensus 438 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~----~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 438 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITP----NYSVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCC----CCCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCC----cccHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 4445555 566777765532 3568999999986654321 13233456777 8999999999999875321
Q ss_pred CCC----CCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 93 ISD----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 93 ~~~----~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
+.. ......++|+.+.+..+++. .+.++++++|||+||++++.++.++|++++++|+..+..........
T Consensus 514 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~---- 589 (710)
T 2xdw_A 514 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY---- 589 (710)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS----
T ss_pred HHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc----
Confidence 100 01113456666666665554 23468999999999999999999999999999999987654321100
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcc-----c
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR-----K 241 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~ 241 (349)
..... ....+-.+ ..++..+.+.. + +....+. +
T Consensus 590 ---------~~~~~----~~~~~g~~---------~~~~~~~~~~~----------------~----sp~~~~~~~~~~~ 627 (710)
T 2xdw_A 590 ---------TIGHA----WTTDYGCS---------DSKQHFEWLIK----------------Y----SPLHNVKLPEADD 627 (710)
T ss_dssp ---------TTGGG----GHHHHCCT---------TSHHHHHHHHH----------------H----CGGGCCCCCSSTT
T ss_pred ---------CCChh----HHHhCCCC---------CCHHHHHHHHH----------------h----CcHhhhccccccc
Confidence 00000 00111011 01111111111 0 1112233 5
Q ss_pred cCC-ceEEEEeCCCccc--hhHHHHHHHhccc---------ceeEEEEcCCCCccccc--ChhhHHHHHHHHHhhc
Q 018916 242 LQC-RSLIFVGESSPFH--SEAVHMTSKIDRR---------YSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 242 i~~-Pvlii~g~~D~~~--~~~~~~~~~~~~~---------~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~~ 303 (349)
+++ |+|+++|++|..+ .....+.+.++.. .+++++++++||..... ++.++.+.+.+||.+.
T Consensus 628 ~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 703 (710)
T 2xdw_A 628 IQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARC 703 (710)
T ss_dssp CCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 777 9999999999988 5566677766542 36899999999987763 3567888899999865
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-18 Score=145.69 Aligned_cols=217 Identities=15% Similarity=0.128 Sum_probs=132.6
Q ss_pred CCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC------
Q 018916 28 SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD------ 95 (349)
Q Consensus 28 ~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~------ 95 (349)
.+..+.+..+-|+ ..|+||++||++.+...|.....+ ...+...|+.|+++|.+++|.+......
T Consensus 27 ~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~---~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g 103 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGA---QRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQG 103 (280)
T ss_dssp TTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCC---HHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTT
T ss_pred cCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccH---HHHHhhCCeEEEEeCCcccccccCcccccccccC
Confidence 5667777666442 357999999999887665332111 1223345999999999988764422100
Q ss_pred -----CC------CCCC-HHHHHHHHHHHH-HHcCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH
Q 018916 96 -----DE------PVLS-VDDLADQIAEVL-NHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 96 -----~~------~~~~-~~~~~~~l~~~l-~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (349)
.. ..+. .+.+.+++..++ +.++. ++++++|||+||.+|+.+|.++|+++++++++++........
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~- 182 (280)
T 3i6y_A 104 AGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCP- 182 (280)
T ss_dssp CCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSH-
T ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCc-
Confidence 00 0012 344556777777 44555 789999999999999999999999999999999976532110
Q ss_pred HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc
Q 018916 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 241 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (349)
+. ......++.. . ... +... +....+.+
T Consensus 183 ~~-------------------~~~~~~~~~~-~---------~~~-------~~~~----------------~~~~~~~~ 210 (280)
T 3i6y_A 183 WG-------------------QKAFTAYLGK-D---------TDT-------WREY----------------DASLLMRA 210 (280)
T ss_dssp HH-------------------HHHHHHHHCS-C---------GGG-------TGGG----------------CHHHHHHH
T ss_pred hH-------------------HHHHHHhcCC-c---------hHH-------HHhc----------------CHHHHHHh
Confidence 00 0111222222 0 000 0000 01111112
Q ss_pred c--CCceEEEEeCCCccchh---HHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 242 L--QCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 242 i--~~Pvlii~g~~D~~~~~---~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+ .+|+++++|++|.+++. .+.+.+.+... .++++++++++|.... ...+.+.+.+|+.+
T Consensus 211 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~ 276 (280)
T 3i6y_A 211 AKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYF--IASFIEDHLRFHSN 276 (280)
T ss_dssp CSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred cCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHH--HHHhHHHHHHHHHh
Confidence 2 48999999999999844 56777776543 3799999999996532 23344455555554
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=145.39 Aligned_cols=206 Identities=14% Similarity=0.062 Sum_probs=127.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCe--EEEEECCCCCCCCCCC--CCC------------CCCCCCHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF--CIYHINPPGHEFGAAA--ISD------------DEPVLSVDD 104 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~--~vi~~D~~G~G~s~~~--~~~------------~~~~~~~~~ 104 (349)
+.++|||+||++++... |...+..+.+.|+ +|+.+|.+++|.+... .+. +....++.+
T Consensus 5 ~~~pvvliHG~~~~~~~------~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 78 (249)
T 3fle_A 5 KTTATLFLHGYGGSERS------ETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKE 78 (249)
T ss_dssp CCEEEEEECCTTCCGGG------THHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHH
T ss_pred CCCcEEEECCCCCChhH------HHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHH
Confidence 56799999999988765 5455556666675 7999999999864210 000 011235555
Q ss_pred HHHHHHHHH----HHcCCCcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 105 LADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 105 ~~~~l~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
+++++.+++ +.++.++++++||||||.+++.++.++|+ +|+++|+++++......... . .
T Consensus 79 ~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~---~--------~ 147 (249)
T 3fle_A 79 NAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE---N--------V 147 (249)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS---C--------T
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC---C--------c
Confidence 566555555 45588999999999999999999999974 79999999987654211000 0 0
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC---
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE--- 252 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~--- 252 (349)
... .+..... .......+.. +. .....+++.++|+|.|+|+
T Consensus 148 ~~~----------~~~~~g~-------p~~~~~~~~~----------------l~---~~~~~~p~~~~~vl~I~G~~~~ 191 (249)
T 3fle_A 148 NEI----------IVDKQGK-------PSRMNAAYRQ----------------LL---SLYKIYCGKEIEVLNIYGDLED 191 (249)
T ss_dssp TTS----------CBCTTCC-------BSSCCHHHHH----------------TG---GGHHHHTTTTCEEEEEEEECCS
T ss_pred chh----------hhcccCC-------CcccCHHHHH----------------HH---HHHhhCCccCCeEEEEeccCCC
Confidence 000 0000000 0000011111 10 1233344467999999998
Q ss_pred ---CCccc--hhHHHHHHHhcccc--eeEEEEcC--CCCcccccChhhHHHHHHHHH
Q 018916 253 ---SSPFH--SEAVHMTSKIDRRY--SALVEVQA--CGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 253 ---~D~~~--~~~~~~~~~~~~~~--~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl 300 (349)
.|..+ ..++.+...+.+.. .+.+.+.| +.|..+.+++ ++.+.|.+||
T Consensus 192 ~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 192 GSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp SSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred CCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 68877 44444555555422 23455544 9999988876 8889999997
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=147.11 Aligned_cols=224 Identities=14% Similarity=0.078 Sum_probs=129.1
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~---- 115 (349)
..|+||++||.+.......... |......+..+ ||.|+++|+|+.+... ....++|..+.+..+.+.
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~-~~~~~~~la~~~g~~Vv~~dyR~~p~~~-------~~~~~~D~~~a~~~l~~~~~~~ 182 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTI-YDSLCRRFVKLSKGVVVSVNYRRAPEHR-------YPCAYDDGWTALKWVMSQPFMR 182 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHH-HHHHHHHHHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHCTTTE
T ss_pred cceEEEEEcCCccccCCCchhh-HHHHHHHHHHHCCCEEEEeeCCCCCCCC-------CcHHHHHHHHHHHHHHhCchhh
Confidence 4589999999764322211111 22333455554 9999999999874321 123445555444444422
Q ss_pred --cCCC-cEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhh
Q 018916 116 --FGLG-AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (349)
Q Consensus 116 --l~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (349)
.+.+ +++|+|||+||.+|+.++.+.++ +++++|+++|............... ..........+.+...+
T Consensus 183 ~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 257 (365)
T 3ebl_A 183 SGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLD-----GKYFVTLQDRDWYWKAY 257 (365)
T ss_dssp ETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHT-----TTSSCCHHHHHHHHHHH
T ss_pred hCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcC-----CCcccCHHHHHHHHHHh
Confidence 2334 89999999999999999998887 7999999999876532211110000 00000000001111111
Q ss_pred cccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC-CceEEEEeCCCccchhHHHHHHHhc
Q 018916 190 FSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKID 268 (349)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~g~~D~~~~~~~~~~~~~~ 268 (349)
+.. .. ..... ...........+..+. .|+|+++|++|.+++....+.+.+.
T Consensus 258 ~~~-~~----------------------~~~~~-----~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~ 309 (365)
T 3ebl_A 258 LPE-DA----------------------DRDHP-----ACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALR 309 (365)
T ss_dssp SCT-TC----------------------CTTST-----TTCTTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHH
T ss_pred CCC-CC----------------------CCCCc-----ccCCCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHH
Confidence 111 00 00000 0000000112222222 4899999999988766667777665
Q ss_pred cc--ceeEEEEcCCCCccc----ccChhhHHHHHHHHHhhccc
Q 018916 269 RR--YSALVEVQACGSMVT----EEQPHAMLIPMEYFLMGYGL 305 (349)
Q Consensus 269 ~~--~~~~~~i~~~gH~~~----~e~p~~~~~~i~~fl~~~~~ 305 (349)
.. .++++++++++|..+ .++.+++.+.|.+||++...
T Consensus 310 ~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 310 EDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp HTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred HCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 43 479999999999766 35677899999999998743
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-20 Score=155.21 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCCCh---hhhhcccccchhhhhhhcC--CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNY---MSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~---~~~~~~~~~~~~~~~~l~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
..++|||+||++.+. .. |......+.+. |++|+++|+ |||.|... ......++.+.++++.+.++.
T Consensus 4 ~~~pvVllHG~~~~~~~~~~------~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~--~~~~~~~~~~~~~~~~~~l~~ 74 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLS------MGAIKKMVEKKIPGIHVLSLEI-GKTLREDV--ENSFFLNVNSQVTTVCQILAK 74 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTT------THHHHHHHHHHSTTCCEEECCC-SSSHHHHH--HHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCcEEEECCCCCCCCCccc------HHHHHHHHHHHCCCcEEEEEEe-CCCCcccc--ccccccCHHHHHHHHHHHHHh
Confidence 456799999998776 33 43333333332 779999998 99976411 001124677777777777765
Q ss_pred cC-C-CcEEEEEechhHHHHHHHHHhhhcc-cceeEEecCCCC
Q 018916 116 FG-L-GAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCK 155 (349)
Q Consensus 116 l~-~-~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 155 (349)
+. . ++++++||||||.++..++.++|++ |+++|+++++..
T Consensus 75 ~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 75 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp CGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred hhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 32 1 7899999999999999999999984 999999997543
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-18 Score=147.24 Aligned_cols=235 Identities=14% Similarity=0.088 Sum_probs=137.9
Q ss_pred CceeEEeCCCe-eEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCC
Q 018916 20 GKDNLIKTSHG-SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 20 ~~~~~i~~~~~-~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
.+...+...++ .+.++.+.+ +..|+||++||.|....... .|......+. ..||.|+++|+|+.+...
T Consensus 60 ~~~~~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~---~~~~~~~~la~~~g~~vv~~dyr~~p~~~----- 131 (317)
T 3qh4_A 60 VADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLD---TDHRQCLELARRARCAVVSVDYRLAPEHP----- 131 (317)
T ss_dssp EEEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTT---TTHHHHHHHHHHHTSEEEEECCCCTTTSC-----
T ss_pred EEEEEecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCChH---HHHHHHHHHHHHcCCEEEEecCCCCCCCC-----
Confidence 35556666555 777776654 35689999999763221111 1323344555 349999999999875432
Q ss_pred CCCCCCHHHHHHHHHHHHHH---cCC--CcEEEEEechhHHHHHHHHHhhhcc----cceeEEecCCCCCCChhHHhhhh
Q 018916 96 DEPVLSVDDLADQIAEVLNH---FGL--GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
....++|..+.+..+.+. +++ ++++|+|||+||.+|+.++.+++++ +.++++++|............
T Consensus 132 --~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-- 207 (317)
T 3qh4_A 132 --YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSE-- 207 (317)
T ss_dssp --TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHH--
T ss_pred --CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHHH--
Confidence 123455555444444432 454 4899999999999999999988774 999999999876542111000
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCce
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 246 (349)
......+ .......+...+........ ... ......+.. -.|+
T Consensus 208 ----~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~------~~~-p~~~~~l~~-lpP~ 250 (317)
T 3qh4_A 208 ----FRATPAF-------------------------DGEAASLMWRHYLAGQTPSP------ESV-PGRRGQLAG-LPAT 250 (317)
T ss_dssp ----TTTCSSS-------------------------CHHHHHHHHHHHHTTCCCCT------TTC-GGGCSCCTT-CCCE
T ss_pred ----hcCCCCc-------------------------CHHHHHHHHHHhcCCCCCCc------ccC-CCcccccCC-CCce
Confidence 0000000 11111111111100000000 000 000011111 1499
Q ss_pred EEEEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCccc-----ccChhhHHHHHHHHHhhc
Q 018916 247 LIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVT-----EEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 247 lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~~ 303 (349)
++++|++|.+++....+.+++... .++++++++++|... .+.++++.+.+.+||++.
T Consensus 251 li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~ 314 (317)
T 3qh4_A 251 LITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADA 314 (317)
T ss_dssp EEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHH
T ss_pred eEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHH
Confidence 999999999986666666665432 389999999999743 456688999999999874
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=144.05 Aligned_cols=198 Identities=12% Similarity=0.043 Sum_probs=123.8
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~ 118 (349)
.++++|||+||++++... |... ...+..+|+|+++|+||++ ++++++.++++.+. .
T Consensus 20 ~~~~~l~~~hg~~~~~~~------~~~~-~~~l~~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~~~ 76 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGIY------FKDL-ALQLNHKAAVYGFHFIEED----------------SRIEQYVSRITEIQPE 76 (244)
T ss_dssp CCSSEEEEECCTTCCGGG------GHHH-HHHTTTTSEEEEECCCCST----------------THHHHHHHHHHHHCSS
T ss_pred CCCCCEEEECCCCCCHHH------HHHH-HHHhCCCceEEEEcCCCHH----------------HHHHHHHHHHHHhCCC
Confidence 367899999999988644 3222 4556679999999999973 23566667776664 5
Q ss_pred CcEEEEEechhHHHHHHHHHhh---hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV 195 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
++++++||||||.+|+.+|.+. ++++.+++++++......+. ... .+.....++
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~---------------~~~---~~~~~~~~~----- 133 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSIT---------------ADT---ENDDSAAYL----- 133 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCC---------------CC----------CCS-----
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCccccc---------------ccc---cHHHHHHHh-----
Confidence 7899999999999999999887 46799999999875421100 000 000000010
Q ss_pred cCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC--CCccch-hHHHHHHHhcccce
Q 018916 196 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE--SSPFHS-EAVHMTSKIDRRYS 272 (349)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~--~D~~~~-~~~~~~~~~~~~~~ 272 (349)
.+...+.+...+. .+..+... ......+++|+++++|+ +|.+.. ....+.+... .+.
T Consensus 134 -------~~~~~~~~~~~~~-----~~~~~~~~-------~~~~~~i~~Pvl~i~g~~~~D~~~~~~~~~w~~~~~-~~~ 193 (244)
T 2cb9_A 134 -------PEAVRETVMQKKR-----CYQEYWAQ-------LINEGRIKSNIHFIEAGIQTETSGAMVLQKWQDAAE-EGY 193 (244)
T ss_dssp -------CHHHHHHHTHHHH-----HHHHHHHH-------CCCCSCBSSEEEEEECSBCSCCCHHHHTTSSGGGBS-SCE
T ss_pred -------HHHHHHHHHHHHH-----HHHHHHHh-------hccCCCcCCCEEEEEccCccccccccchhHHHHhcC-CCC
Confidence 1111111111000 00000000 02346789999999999 887532 2222333332 248
Q ss_pred eEEEEcCCCC--cccccChhhHHHHHHHHHhhcc
Q 018916 273 ALVEVQACGS--MVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 273 ~~~~i~~~gH--~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+++.++ +|| ++..++++++++.|.+||.+..
T Consensus 194 ~~~~i~-ggH~~~~~~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 194 AEYTGY-GAHKDMLEGEFAEKNANIILNILDKIN 226 (244)
T ss_dssp EEEECS-SBGGGTTSHHHHHHHHHHHHHHHHTC-
T ss_pred EEEEec-CChHHHcChHHHHHHHHHHHHHHhcCc
Confidence 899998 599 6666889999999999998764
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=140.61 Aligned_cols=207 Identities=11% Similarity=0.054 Sum_probs=122.9
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~- 118 (349)
.++++|+|+||++++... |... ...+.. ++|+++|+||+|. .++++.++++.+..
T Consensus 15 ~~~~~l~~~hg~~~~~~~------~~~~-~~~l~~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~~ 70 (230)
T 1jmk_C 15 DQEQIIFAFPPVLGYGLM------YQNL-SSRLPS-YKLCAFDFIEEED----------------RLDRYADLIQKLQPE 70 (230)
T ss_dssp TCSEEEEEECCTTCCGGG------GHHH-HHHCTT-EEEEEECCCCSTT----------------HHHHHHHHHHHHCCS
T ss_pred CCCCCEEEECCCCCchHH------HHHH-HHhcCC-CeEEEecCCCHHH----------------HHHHHHHHHHHhCCC
Confidence 356799999999987644 3233 344556 9999999999853 24455666666654
Q ss_pred CcEEEEEechhHHHHHHHHHhhh---cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEV 195 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
++++++||||||.+|+.+|.+++ +++.+++++++...... ..+.. . ........ +... .. ..
T Consensus 71 ~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~-~~~~~-~---------~~~~~~~~-~~~~--~~-~~ 135 (230)
T 1jmk_C 71 GPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGV-SDLDG-R---------TVESDVEA-LMNV--NR-DN 135 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCC-C------------------CCHHH-HHHH--TT-TC
T ss_pred CCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcc-ccccc-c---------cHHHHHHH-HHhc--Ch-hh
Confidence 58999999999999999999876 57999999997654321 00000 0 00000100 0000 00 00
Q ss_pred cCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch-hHHHHHHHhcccceeE
Q 018916 196 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSAL 274 (349)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~-~~~~~~~~~~~~~~~~ 274 (349)
.. ...+.....+.... .....+.. .......+++|+++++|++|..++ ....+.+... .+.++
T Consensus 136 ~~---~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~P~l~i~g~~D~~~~~~~~~w~~~~~-~~~~~ 199 (230)
T 1jmk_C 136 EA---LNSEAVKHGLKQKT---------HAFYSYYV---NLISTGQVKADIDLLTSGADFDIPEWLASWEEATT-GAYRM 199 (230)
T ss_dssp SG---GGSHHHHHHHHHHH---------HHHHHHHH---HCCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBS-SCEEE
T ss_pred hh---hhhHHHHHHHHHHH---------HHHHHHhh---hccccccccccEEEEEeCCCCCCccccchHHHhcC-CCeEE
Confidence 00 00111111111100 00001100 002346789999999999998873 2222333332 24789
Q ss_pred EEEcCCCC--cccccChhhHHHHHHHHHhh
Q 018916 275 VEVQACGS--MVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 275 ~~i~~~gH--~~~~e~p~~~~~~i~~fl~~ 302 (349)
+.+++ || ++..++++++++.|.+||++
T Consensus 200 ~~i~g-~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 200 KRGFG-THAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp EECSS-CGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred EEecC-ChHHHcCcHhHHHHHHHHHHHHhh
Confidence 99985 99 77778899999999999975
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-18 Score=138.03 Aligned_cols=179 Identities=12% Similarity=0.107 Sum_probs=119.2
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHH---H
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SDDEPVLSVDDLADQIAEVLN---H 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~--~~~~~~~~~~~~~~~l~~~l~---~ 115 (349)
.+++|||+||+|.+...+. .....+...++.|+++|.+|++.-+... ........+++..+.+..+++ .
T Consensus 21 a~~~Vv~lHG~G~~~~~~~------~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADII------SLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp CSEEEEEECCTTCCHHHHH------GGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHH------HHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 4679999999998876532 2333445679999999999976321110 011112345555555555543 3
Q ss_pred cC--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccc
Q 018916 116 FG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQ 193 (349)
Q Consensus 116 l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (349)
.+ .++++++|+|+||.+++.++.++|+++.+++.+++........ ..
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~------------------------------~~- 143 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA------------------------------IG- 143 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC------------------------------GG-
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh------------------------------hh-
Confidence 33 3689999999999999999999999999999988754321100 00
Q ss_pred cccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhccc-
Q 018916 194 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR- 270 (349)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~- 270 (349)
.. . ....++|+++++|++|+++ +..+++.+.+...
T Consensus 144 ~~-------~-----------------------------------~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g 181 (210)
T 4h0c_A 144 NY-------K-----------------------------------GDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMN 181 (210)
T ss_dssp GC-------C-----------------------------------BCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTT
T ss_pred hh-------h-----------------------------------hhccCCceEEEecCCCCccCHHHHHHHHHHHHHCC
Confidence 00 0 0011469999999999998 5566666666543
Q ss_pred -ceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 271 -YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 271 -~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
.++++++++.||.+. +++ .+.|.+||.+
T Consensus 182 ~~v~~~~ypg~gH~i~---~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 182 AAVSQVVYPGRPHTIS---GDE-IQLVNNTILK 210 (210)
T ss_dssp CEEEEEEEETCCSSCC---HHH-HHHHHHTTTC
T ss_pred CCeEEEEECCCCCCcC---HHH-HHHHHHHHcC
Confidence 378999999999764 444 4667888764
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=139.82 Aligned_cols=204 Identities=12% Similarity=0.082 Sum_probs=124.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCe---EEEEECCCCCC------CCCCCCCCC-------CCCCCHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHE------FGAAAISDD-------EPVLSVDD 104 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~---~vi~~D~~G~G------~s~~~~~~~-------~~~~~~~~ 104 (349)
++++|||+||++++... |...+..+.++++ .|+++|..++| .+....... ...+++++
T Consensus 2 ~~~pvvllHG~~~~~~~------~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 75 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASS------LDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDD 75 (254)
T ss_dssp CCCCEEEECCTTCCTTT------THHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHH
T ss_pred CCCCEEEECCCCCCcch------HHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHH
Confidence 46789999999988755 4444444444432 33433333332 121100000 12468999
Q ss_pred HHHHH----HHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 105 LADQI----AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 105 ~~~~l----~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
+++++ ..+.+.++.++++++||||||.+++.++.++|+ +|+++|+++++..........
T Consensus 76 ~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~------------ 143 (254)
T 3ds8_A 76 WSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG------------ 143 (254)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC------------
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc------------
Confidence 99998 455566788999999999999999999999998 899999999977654221000
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC---
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE--- 252 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~--- 252 (349)
. .+...... . ...... .... ....+.+ ++|++.|+|.
T Consensus 144 -----------~-~~~~~~~p----~-~~~~~~---------------~~~~-------~~~~~~~-~~~vl~I~G~~~~ 183 (254)
T 3ds8_A 144 -----------M-DLSFKKLP----N-STPQMD---------------YFIK-------NQTEVSP-DLEVLAIAGELSE 183 (254)
T ss_dssp -----------S-CTTCSSCS----S-CCHHHH---------------HHHH-------TGGGSCT-TCEEEEEEEESBT
T ss_pred -----------c-ccccccCC----c-chHHHH---------------HHHH-------HHhhCCC-CcEEEEEEecCCC
Confidence 0 00000000 0 000000 0000 1111222 6899999999
Q ss_pred ---CCccc--hhHHHHHHHhccc--ceeEEEEcC--CCCcccccChhhHHHHHHHHHhhc
Q 018916 253 ---SSPFH--SEAVHMTSKIDRR--YSALVEVQA--CGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 253 ---~D~~~--~~~~~~~~~~~~~--~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.|.++ ..++.+...+++. ..+...+.+ ++|..+.++|+ +.+.|..||++.
T Consensus 184 ~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~ 242 (254)
T 3ds8_A 184 DNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKF 242 (254)
T ss_dssp TBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTC
T ss_pred CCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHh
Confidence 99988 3444455555542 133445555 78999999885 999999999986
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-17 Score=139.37 Aligned_cols=218 Identities=13% Similarity=0.042 Sum_probs=136.7
Q ss_pred CCeeEEEEEccC----------CCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCC
Q 018916 28 SHGSLSVTIYGD----------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 28 ~~~~l~~~~~g~----------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
.+..+.+..+-| ...|+||++||++++...|.... .+..++. .|+.|+.+|.+++|.+..+
T Consensus 17 ~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~---- 88 (263)
T 2uz0_A 17 LDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNSWLKRT----NVERLLRGTNLIVVMPNTSNGWYTDTQ---- 88 (263)
T ss_dssp TTEEEEEEEEECC---------CCBCEEEEECCTTCCTTHHHHHS----CHHHHTTTCCCEEEECCCTTSTTSBCT----
T ss_pred hCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHHHHhcc----CHHHHHhcCCeEEEEECCCCCccccCC----
Confidence 455666555433 24589999999998876543211 1234443 6899999999988765532
Q ss_pred CCCCCHHHHHHHHHHHHHHc----C--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 97 EPVLSVDDLADQIAEVLNHF----G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l----~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
......+.+++++..+++.. + .++++++|||+||.+|+.+|. +|+++++++++++........... .
T Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~---~--- 161 (263)
T 2uz0_A 89 YGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPES---Q--- 161 (263)
T ss_dssp TSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGG---T---
T ss_pred CcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccc---c---
Confidence 11233677788888888763 2 368999999999999999999 999999999999987654311100 0
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccC--CceEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ--CRSLI 248 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvli 248 (349)
... . ......++.. .. .. .+ ...+....+.++. +|+++
T Consensus 162 ---~~~-~----~~~~~~~~~~-~~-------~~--------~~----------------~~~~~~~~~~~~~~~~p~li 201 (263)
T 2uz0_A 162 ---NLG-S----PAYWRGVFGE-IR-------DW--------TT----------------SPYSLESLAKKSDKKTKLWA 201 (263)
T ss_dssp ---TCS-C----HHHHHHHHCC-CS-------CT--------TT----------------STTSHHHHGGGCCSCSEEEE
T ss_pred ---ccc-c----chhHHHHcCC-hh-------hh--------cc----------------ccCCHHHHHHhccCCCeEEE
Confidence 000 0 0011222222 00 00 00 0011222223332 89999
Q ss_pred EEeCCCccchhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 249 FVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 249 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++|++|.+++..+.+.+.+... +.+++++++ ||.... .++..+.+.+||.+.
T Consensus 202 ~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~g-~H~~~~--~~~~~~~~~~~l~~~ 255 (263)
T 2uz0_A 202 WCGEQDFLYEANNLAVKNLKKLGFDVTYSHSAG-THEWYY--WEKQLEVFLTTLPID 255 (263)
T ss_dssp EEETTSTTHHHHHHHHHHHHHTTCEEEEEEESC-CSSHHH--HHHHHHHHHHHSSSC
T ss_pred EeCCCchhhHHHHHHHHHHHHCCCCeEEEECCC-CcCHHH--HHHHHHHHHHHHHhh
Confidence 9999999986667777776653 368999998 997542 235557777888754
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.7e-18 Score=142.49 Aligned_cols=197 Identities=14% Similarity=0.110 Sum_probs=123.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCC---------------------CCCCCCCCC--CCC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP---------------------GHEFGAAAI--SDD 96 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~---------------------G~G~s~~~~--~~~ 96 (349)
.+|+|||+||++++...|.... ..+...+ ..||+|+++|+| |+|.+..-. ...
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~---~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~ 80 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKS---SGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEI 80 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHT---HHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSS
T ss_pred cCceEEEeCCCCccHHHHHHHH---HHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCC
Confidence 5689999999999986642211 1122333 449999999999 444432100 000
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc------ccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH------RVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
....++++.++.+.+.++..+ ++++|+||||||.+|+.+|.++++ .++.++++++........
T Consensus 81 ~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---------- 149 (243)
T 1ycd_A 81 SHELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---------- 149 (243)
T ss_dssp GGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT----------
T ss_pred cchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc----------
Confidence 112467778888887776655 678999999999999999988753 355666665543210000
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
. +.. ...- ..+ + . +....+.++++|+++++
T Consensus 150 -----~-------------~~~-~~~~-----~~~--------~---------------~---~~~~~~~~~~~P~l~i~ 179 (243)
T 1ycd_A 150 -----E-------------HPG-ELRI-----TEK--------F---------------R---DSFAVKPDMKTKMIFIY 179 (243)
T ss_dssp -----T-------------STT-CEEE-----CGG--------G---------------T---TTTCCCTTCCCEEEEEE
T ss_pred -----c-------------ccc-cccc-----chh--------H---------------H---HhccCcccCCCCEEEEE
Confidence 0 000 0000 000 0 0 01112456789999999
Q ss_pred eCCCccc--hhHHHHHHHhccc-----ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 251 GESSPFH--SEAVHMTSKIDRR-----YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|++|.++ ..++.+.+.+++. ....+.++++||++..+ +++.+.|.+||++.
T Consensus 180 G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~ 237 (243)
T 1ycd_A 180 GASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSS 237 (243)
T ss_dssp ETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHH
T ss_pred eCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHHHHHHh
Confidence 9999998 4566777777652 02556677899987754 35899999999875
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=147.07 Aligned_cols=104 Identities=11% Similarity=0.078 Sum_probs=81.8
Q ss_pred CCCeEEEecCCCCChhh-hhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 41 DKPALVTYPDLALNYMS-CFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~-~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
.+++|||+||++++... |.. .....+.++||+|+++|+||||.++. ..+.+++++.+..+++..+.+
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~-----~l~~~L~~~G~~v~~~d~~g~g~~~~-------~~~~~~l~~~i~~~~~~~g~~ 97 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDS-----NWIPLSTQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITALYAGSGNN 97 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTT-----THHHHHHTTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEEECCCCCCcchhhHH-----HHHHHHHhCCCEEEEECCCCCCCCcH-------HHHHHHHHHHHHHHHHHhCCC
Confidence 56789999999988754 321 22334446699999999999986531 134567777888888888889
Q ss_pred cEEEEEechhHHHHHHHHHhhh---cccceeEEecCCCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKA 156 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~ 156 (349)
+++|+||||||.++..++..+| ++|+++|++++....
T Consensus 98 ~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g 137 (317)
T 1tca_A 98 KLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 137 (317)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred CEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCC
Confidence 9999999999999999888776 789999999987654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.5e-18 Score=142.57 Aligned_cols=205 Identities=12% Similarity=0.135 Sum_probs=119.6
Q ss_pred CCeeEEEEEccC-----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECC--CCCCCCCCCCC------
Q 018916 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP--PGHEFGAAAIS------ 94 (349)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~--~G~G~s~~~~~------ 94 (349)
.+..+.+..+-+ +..|+||++||++.+...+.... .....+..+||.|+++|. ||+|.+.....
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~---~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~ 102 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKS---GYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTG 102 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHS---CCHHHHHHHTCEEEEECSCSSCCCC--------CCCC
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcc---hHHHHhhcCCeEEEEeccccCccccccccccccccCC
Confidence 566777666644 23479999999998876653221 112344567999999999 76654321100
Q ss_pred ----CCCCC-------CCHHHHHHHHHHHHH-HcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh
Q 018916 95 ----DDEPV-------LSVDDLADQIAEVLN-HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (349)
Q Consensus 95 ----~~~~~-------~~~~~~~~~l~~~l~-~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (349)
..... ...+..++++..+++ .+++ ++++++||||||.+|+.+|.++|+++++++++++.......
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~- 181 (282)
T 3fcx_A 103 AGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC- 181 (282)
T ss_dssp CCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGS-
T ss_pred cccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccC-
Confidence 00000 112334556666665 5554 67999999999999999999999999999999987653210
Q ss_pred HHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcc
Q 018916 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 240 (349)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (349)
.+. ......++.. .. . .+....+ . .....+.
T Consensus 182 ~~~-------------------~~~~~~~~~~-~~-------~---------~~~~~~~---~----------~~~~~~~ 212 (282)
T 3fcx_A 182 PWG-------------------KKAFSGYLGT-DQ-------S---------KWKAYDA---T----------HLVKSYP 212 (282)
T ss_dssp HHH-------------------HHHHHHHHC-----------C---------CGGGGCH---H----------HHHTTCC
T ss_pred chh-------------------HHHHHHhcCC-ch-------h---------hhhhcCH---H----------HHHHhcc
Confidence 000 0011112222 00 0 0000000 0 0112234
Q ss_pred ccCCceEEEEeCCCccch--h--HHHHHHHhccc--ceeEEEEcCCCCccc
Q 018916 241 KLQCRSLIFVGESSPFHS--E--AVHMTSKIDRR--YSALVEVQACGSMVT 285 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~~--~--~~~~~~~~~~~--~~~~~~i~~~gH~~~ 285 (349)
.+++|+++++|++|.+++ . .+.+.+.+... .++++++++++|...
T Consensus 213 ~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 263 (282)
T 3fcx_A 213 GSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYY 263 (282)
T ss_dssp ---CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHH
T ss_pred cCCCcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHH
Confidence 557999999999999872 2 23555554432 379999999999654
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-17 Score=145.10 Aligned_cols=114 Identities=15% Similarity=-0.009 Sum_probs=77.3
Q ss_pred CCCeEEEecCCCCChhhhhc-----ccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC----CCCHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQ-----GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP----VLSVDDLADQIAE 111 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~-----~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~----~~~~~~~~~~l~~ 111 (349)
..|+||++||++++...+.. ...|...+..++++||.|+++|+||||.|......... ...+.+.++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 45789999999887543111 11244566778889999999999999988632111000 0245566677777
Q ss_pred HHHHcCC---CcEEEEEechhHHHHHHHHHh-hhc-----ccceeEEecCCC
Q 018916 112 VLNHFGL---GAVMCMGVTAGAYILTLFAMK-YRH-----RVLGLILVSPLC 154 (349)
Q Consensus 112 ~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~-~p~-----~v~~lvl~~~~~ 154 (349)
+++.+++ ++++++||||||.+++.++.. .++ .+.+++..++..
T Consensus 158 ~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 209 (397)
T 3h2g_A 158 VLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPY 209 (397)
T ss_dssp HHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCS
T ss_pred HHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccc
Confidence 8888877 689999999999999988743 332 355655555443
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-17 Score=138.68 Aligned_cols=221 Identities=10% Similarity=0.105 Sum_probs=131.1
Q ss_pred CCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC------
Q 018916 28 SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD------ 95 (349)
Q Consensus 28 ~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~------ 95 (349)
.+..+.+..+-|+ ..|+||++||++.+...|..... ....+...|+.|+++|.+++|.+......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~---~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g 101 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAG---AFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQG 101 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSC---CHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTT
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchh---HHHHHhhCCeEEEEeCCcccccccccccccccccC
Confidence 5667777766543 34799999999888766532111 11233356999999999988765322100
Q ss_pred -----C------CCCCC-HHHHHHHHHHHHHH-cCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhH
Q 018916 96 -----D------EPVLS-VDDLADQIAEVLNH-FGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 96 -----~------~~~~~-~~~~~~~l~~~l~~-l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (349)
. ..... .+.+.+++..+++. +.. ++++++||||||.+|+.++.++|+++++++++++........
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~- 180 (280)
T 3ls2_A 102 AGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP- 180 (280)
T ss_dssp CCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH-
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc-
Confidence 0 00112 34455666666654 333 789999999999999999999999999999999976532110
Q ss_pred HhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc
Q 018916 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 241 (349)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (349)
+. ......++.. . .. .+.... .......+. ..
T Consensus 181 ~~-------------------~~~~~~~~g~-~---------~~-------~~~~~~---~~~~~~~~~---------~~ 212 (280)
T 3ls2_A 181 WG-------------------VKAFTGYLGA-D---------KT-------TWAQYD---SCKLMAKAE---------QS 212 (280)
T ss_dssp HH-------------------HHHHHHHHCS-C---------GG-------GTGGGC---HHHHHHTCC---------GG
T ss_pred ch-------------------hhHHHhhcCc-h---------HH-------HHHhcC---HHHHHHhcc---------cc
Confidence 00 0011222222 0 00 000000 000000000 01
Q ss_pred cCCceEEEEeCCCccchh---HHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 242 LQCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~~~---~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
..+|+++++|++|.+++. .+.+.+.+... .++++++++++|.... .......+.+|+.+
T Consensus 213 ~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~ 276 (280)
T 3ls2_A 213 NYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFF--ISSFIDQHLVFHHQ 276 (280)
T ss_dssp GCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchhh--HHHHHHHHHHHHHH
Confidence 367999999999999854 66666666542 3799999999997543 22334444556654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=156.54 Aligned_cols=233 Identities=7% Similarity=-0.020 Sum_probs=140.2
Q ss_pred ceeEEeC-CCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
++..+.. +|.++.+..+.+ +..|+||++||........ .|......++++||.|+++|+||+|.....+
T Consensus 426 ~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 501 (693)
T 3iuj_A 426 EQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTP----SFSVSVANWLDLGGVYAVANLRGGGEYGQAW 501 (693)
T ss_dssp EEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCC----CCCHHHHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCC----ccCHHHHHHHHCCCEEEEEeCCCCCccCHHH
Confidence 3444554 555676655432 3568999999975543221 1334445778899999999999998653211
Q ss_pred CC----CCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh
Q 018916 94 SD----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 94 ~~----~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
.. ......++|+.+.+..+++. ...+++.++|||+||++++.++.++|++++++|+..+..........
T Consensus 502 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~----- 576 (693)
T 3iuj_A 502 HLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTF----- 576 (693)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGS-----
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccC-----
Confidence 10 01112456666666666554 22368999999999999999999999999999999987764322100
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHH-HHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc-cCCc
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQCR 245 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P 245 (349)
..... ....+ +. . ..++. .+.+.. .+....+.+ +++|
T Consensus 577 --------~~~~~----~~~~~-g~-p-------~~~~~~~~~~~~--------------------~sp~~~~~~~~~~P 615 (693)
T 3iuj_A 577 --------TAGTG----WAYDY-GT-S-------ADSEAMFDYLKG--------------------YSPLHNVRPGVSYP 615 (693)
T ss_dssp --------GGGGG----CHHHH-CC-T-------TSCHHHHHHHHH--------------------HCHHHHCCTTCCCC
T ss_pred --------CCchh----HHHHc-CC-c-------cCHHHHHHHHHh--------------------cCHHHhhcccCCCC
Confidence 00000 00001 11 0 01111 111111 112233455 7887
Q ss_pred -eEEEEeCCCccc--hhHHHHHHHhccc-----ceeEEEEcCCCCcccc--cChhhHHHHHHHHHhhc
Q 018916 246 -SLIFVGESSPFH--SEAVHMTSKIDRR-----YSALVEVQACGSMVTE--EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 246 -vlii~g~~D~~~--~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~~ 303 (349)
+|+++|++|..+ .....+.+.+... .+++++++++||.... ++..+..+.+.+||.+.
T Consensus 616 p~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 683 (693)
T 3iuj_A 616 STMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYE 683 (693)
T ss_dssp EEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 999999999988 5666677776542 3689999999998765 45667788899999875
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.3e-17 Score=136.35 Aligned_cols=220 Identities=9% Similarity=0.042 Sum_probs=131.1
Q ss_pred CCeeEEEEEccCC-----CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC---------
Q 018916 28 SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--------- 93 (349)
Q Consensus 28 ~~~~l~~~~~g~~-----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~--------- 93 (349)
.+..+.+..+-|+ ..|+||++||++.+...|.... .....+...|+.|+++|.+++|.+....
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~---~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~ 108 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKS---GFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSA 108 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHS---CTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTB
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhcc---cHHHHHhhCCeEEEEeccccccccccccccccccCCC
Confidence 4666777666543 3479999999988876653211 1112333569999999987544322110
Q ss_pred -----CCC---CCCCC-HHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHH
Q 018916 94 -----SDD---EPVLS-VDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (349)
Q Consensus 94 -----~~~---~~~~~-~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (349)
... ...+. .+.+++++..+++.. ..++++++||||||.+|+.+|.++|+++++++++++....... .+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~-~~ 187 (283)
T 4b6g_A 109 GFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLV-PW 187 (283)
T ss_dssp CTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGS-HH
T ss_pred cccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccC-cc
Confidence 000 00112 444466777777654 2368999999999999999999999999999999997653211 00
Q ss_pred hhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc
Q 018916 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 242 (349)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (349)
. ......++.. . .. .+.... ........ +.
T Consensus 188 ~-------------------~~~~~~~~g~-~---------~~-------~~~~~~---~~~~~~~~-----------~~ 217 (283)
T 4b6g_A 188 G-------------------EKAFTAYLGK-D---------RE-------KWQQYD---ANSLIQQG-----------YK 217 (283)
T ss_dssp H-------------------HHHHHHHHCS-C---------GG-------GGGGGC---HHHHHHHT-----------CC
T ss_pred h-------------------hhhHHhhcCC-c---------hH-------HHHhcC---HHHHHHhc-----------cc
Confidence 0 0011222222 0 00 000000 01111111 12
Q ss_pred CCceEEEEeCCCccchh---HHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 243 QCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~~~---~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
..|+++++|+.|.+++. .+.+.+.+... .++++++++++|.... .........+|+.+.
T Consensus 218 ~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~l~~~l~~~~~~ 281 (283)
T 4b6g_A 218 VQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYF--IASFIGEHIAYHAAF 281 (283)
T ss_dssp CSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHHH--HHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHhH--HHHHHHHHHHHHHHh
Confidence 46999999999999854 56666666532 3799999999996532 334455566676653
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-16 Score=153.45 Aligned_cols=236 Identities=11% Similarity=0.050 Sum_probs=143.3
Q ss_pred ceeEEeC-CCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
+...+.. +|.++.+....+ +..|+||++||....... . .|......++++||.|+++|+||+|.+...+
T Consensus 481 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~---~-~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~ 556 (751)
T 2xe4_A 481 ERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMD---P-QFSIQHLPYCDRGMIFAIAHIRGGSELGRAW 556 (751)
T ss_dssp EEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCC---C-CCCGGGHHHHTTTCEEEEECCTTSCTTCTHH
T ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCC---C-cchHHHHHHHhCCcEEEEEeeCCCCCcCcch
Confidence 3445554 555676544321 346899999997655432 1 1334445677889999999999998653211
Q ss_pred CC-----CCCCCCHHHHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 94 SD-----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 94 ~~-----~~~~~~~~~~~~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
.. ......++|+++.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+..+.... .....
T Consensus 557 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~---~~~~~-- 631 (751)
T 2xe4_A 557 YEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDV---MTTMC-- 631 (751)
T ss_dssp HHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCH---HHHHT--
T ss_pred hhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchH---Hhhhc--
Confidence 00 11124567777777777665 33478999999999999999999999999999999886532 11000
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc-
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR- 245 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P- 245 (349)
.... .... ..+ . .+ .. ...++..+. +..+ +....+.++++|
T Consensus 632 -------~~~~-~~~~----~~~--~-~~-g~--p~~~~~~~~----------------~~~~----sp~~~~~~~~~Pp 673 (751)
T 2xe4_A 632 -------DPSI-PLTT----GEW--E-EW-GN--PNEYKYYDY----------------MLSY----SPMDNVRAQEYPN 673 (751)
T ss_dssp -------CTTS-TTHH----HHT--T-TT-CC--TTSHHHHHH----------------HHHH----CTGGGCCSSCCCE
T ss_pred -------ccCc-ccch----hhH--H-Hc-CC--CCCHHHHHH----------------HHhc----ChhhhhccCCCCc
Confidence 0000 0000 001 0 11 00 001111111 1111 122345567897
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcccc-----eeEEEEcCCCCcccccChh--hHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDRRY-----SALVEVQACGSMVTEEQPH--AMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~~~-----~~~~~i~~~gH~~~~e~p~--~~~~~i~~fl~~~ 303 (349)
+|+++|++|..+ ....++.+.+...+ ..+.+++++||....+.++ +..+.+.+||.+.
T Consensus 674 ~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~ 740 (751)
T 2xe4_A 674 IMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKH 740 (751)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred eeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHH
Confidence 999999999988 56677777776531 2345559999998765444 3455788898875
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=134.88 Aligned_cols=203 Identities=12% Similarity=0.043 Sum_probs=129.3
Q ss_pred CCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcc-cccchhhhhhhcC----CeEEEEECCCCCCCCCCCCCCC
Q 018916 28 SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQG-LFFCPEACSLLLH----NFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 28 ~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~-~~~~~~~~~~l~~----g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
.+..+.+..+-+. ..|+||++||.+.+...|... ..+......+.++ +|.|+.+|.+++|.+.. .
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~---~- 117 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIA---D- 117 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCS---C-
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcccc---c-
Confidence 4556666665432 457999999999876554322 1011123344444 69999999999865321 1
Q ss_pred CCCCCHHHHHHHHHHHHH-HcCC----CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 97 EPVLSVDDLADQIAEVLN-HFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
......+++++++..+++ .++. ++++++|||+||.+++.++.++|+++++++++++.......
T Consensus 118 ~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~------------ 185 (268)
T 1jjf_A 118 GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN------------ 185 (268)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH------------
T ss_pred cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch------------
Confidence 000112333555555554 4443 68999999999999999999999999999999986543210
Q ss_pred HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc-eEEEE
Q 018916 172 LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SLIFV 250 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~ 250 (349)
...+.. .... ...+.| +++++
T Consensus 186 ---------------~~~~~~----------~~~~---------------------------------~~~~~pp~li~~ 207 (268)
T 1jjf_A 186 ---------------ERLFPD----------GGKA---------------------------------AREKLKLLFIAC 207 (268)
T ss_dssp ---------------HHHCTT----------TTHH---------------------------------HHHHCSEEEEEE
T ss_pred ---------------hhhcCc----------chhh---------------------------------hhhcCceEEEEe
Confidence 001111 0000 011244 99999
Q ss_pred eCCCccchhHHHHHHHhcc--cceeEEEEcCCCCcccccChhhHHHHHHHHHhhcccc
Q 018916 251 GESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 306 (349)
Q Consensus 251 g~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 306 (349)
|++|.+++..+.+.+.+.. ..++++++++++|.... ..+....+.+||.+.++.
T Consensus 208 G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~l~~~~~~ 263 (268)
T 1jjf_A 208 GTNDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDFNV--WKPGLWNFLQMADEAGLT 263 (268)
T ss_dssp ETTCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSHHH--HHHHHHHHHHHHHHHTTT
T ss_pred cCCCCCccHHHHHHHHHHHCCCceEEEEcCCCCcCHhH--HHHHHHHHHHHHHhcCcc
Confidence 9999998666666666643 24789999999997642 234456678899887753
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=122.80 Aligned_cols=101 Identities=14% Similarity=0.119 Sum_probs=83.1
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+..+++.++.+++|...| .+|+|||+| .+... |... +.++|+|+++|+||||.|..+.. .
T Consensus 3 ~~~~~~~~g~~~~~~~~g--~~~~vv~~H---~~~~~------~~~~----l~~~~~v~~~d~~G~G~s~~~~~-----~ 62 (131)
T 2dst_A 3 RAGYLHLYGLNLVFDRVG--KGPPVLLVA---EEASR------WPEA----LPEGYAFYLLDLPGYGRTEGPRM-----A 62 (131)
T ss_dssp EEEEEEETTEEEEEEEEC--CSSEEEEES---SSGGG------CCSC----CCTTSEEEEECCTTSTTCCCCCC-----C
T ss_pred ceEEEEECCEEEEEEEcC--CCCeEEEEc---CCHHH------HHHH----HhCCcEEEEECCCCCCCCCCCCC-----C
Confidence 356677889999999888 478999999 23322 4322 56679999999999999874321 2
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (349)
++++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 63 -~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 63 -PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp -HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred -HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999884
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-16 Score=149.25 Aligned_cols=233 Identities=9% Similarity=0.006 Sum_probs=142.9
Q ss_pred ceeEEeC-CCeeEEEEEccC------CCCCeEEEecCCCCChhhhhcccccchhh-hhhhcCCeEEEEECCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAA 92 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~------~~~p~vv~lHG~~~~~~~~~~~~~~~~~~-~~~l~~g~~vi~~D~~G~G~s~~~ 92 (349)
++..+.+ +|.++.+..+.+ +..|+||++||........ . |.... ..++++||.|+.+|+||+|.....
T Consensus 450 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~---~-~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~ 525 (711)
T 4hvt_A 450 EQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAP---Y-FSRIKNEVWVKNAGVSVLANIRGGGEFGPE 525 (711)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCC---C-CCHHHHHHTGGGTCEEEEECCTTSSTTCHH
T ss_pred EEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCC---c-ccHHHHHHHHHCCCEEEEEeCCCCCCcchh
Confidence 3444554 566777655432 3568999999986554331 1 22222 367789999999999999865421
Q ss_pred CC----CCCCCCCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh
Q 018916 93 IS----DDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 93 ~~----~~~~~~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
.. .......++|+.+.+..+++.- ..+++.++|||+||++++.++.++|++++++|...+..........
T Consensus 526 ~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~---- 601 (711)
T 4hvt_A 526 WHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEF---- 601 (711)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS----
T ss_pred HHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhcc----
Confidence 10 1111234455555555555442 2267999999999999999999999999999999887764321100
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC--
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-- 244 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-- 244 (349)
..... ....+ +. . ..++..+.+.. .+....+.++++
T Consensus 602 ---------~~~~~----~~~~~-G~-p-------~~~~~~~~l~~--------------------~SP~~~v~~i~~~p 639 (711)
T 4hvt_A 602 ---------GAGHS----WVTEY-GD-P-------EIPNDLLHIKK--------------------YAPLENLSLTQKYP 639 (711)
T ss_dssp ---------TTGGG----GHHHH-CC-T-------TSHHHHHHHHH--------------------HCGGGSCCTTSCCC
T ss_pred ---------ccchH----HHHHh-CC-C-------cCHHHHHHHHH--------------------cCHHHHHhhcCCCC
Confidence 00000 00011 11 0 01111111111 122334556676
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHh-ccc--ceeEEEEcCCCCcccc--cChhhHHHHHHHHHhhc
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKI-DRR--YSALVEVQACGSMVTE--EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~-~~~--~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~~ 303 (349)
|+|+++|++|..+ ..+..+.+.+ ... .+++++++++||.... ++..+..+.+.+||.+.
T Consensus 640 PvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~ 705 (711)
T 4hvt_A 640 TVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANA 705 (711)
T ss_dssp EEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999998 5677788888 432 3789999999998654 23345566778898764
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-16 Score=140.11 Aligned_cols=192 Identities=10% Similarity=0.084 Sum_probs=130.0
Q ss_pred CCeeEEEEEccCCC------CCeEEEecCCCCChhhhhcccccc------hhhhhhhcCCeEEEEECCCCCCCCCCCCC-
Q 018916 28 SHGSLSVTIYGDQD------KPALVTYPDLALNYMSCFQGLFFC------PEACSLLLHNFCIYHINPPGHEFGAAAIS- 94 (349)
Q Consensus 28 ~~~~l~~~~~g~~~------~p~vv~lHG~~~~~~~~~~~~~~~------~~~~~~l~~g~~vi~~D~~G~G~s~~~~~- 94 (349)
+|..+.|..+.|.+ .|+||++||++.++..+....+.. .........++.|+++|.+|.+.....+.
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD 233 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccc
Confidence 45688888776532 378999999986643321111000 00112235678999999998754322111
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhh
Q 018916 95 ---DDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 95 ---~~~~~~~~~~~~~~l~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
.......++++.+.+..+++.++.+ +++++||||||.+++.++.++|+++++++++++..
T Consensus 234 ~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~--------------- 298 (380)
T 3doh_A 234 RENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGG--------------- 298 (380)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC---------------
T ss_pred cccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCC---------------
Confidence 0111345677777888888887764 79999999999999999999999999999999874
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc-CCceEE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLI 248 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvli 248 (349)
.. ..+..+ ++|+|+
T Consensus 299 ---------------------~~--------------------------------------------~~~~~~~~~P~li 313 (380)
T 3doh_A 299 ---------------------DV--------------------------------------------SKVERIKDIPIWV 313 (380)
T ss_dssp ---------------------CG--------------------------------------------GGGGGGTTSCEEE
T ss_pred ---------------------Ch--------------------------------------------hhhhhccCCCEEE
Confidence 00 011122 389999
Q ss_pred EEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCC--------CCcccccChhhHH--HHHHHHHhhc
Q 018916 249 FVGESSPFH--SEAVHMTSKIDRR--YSALVEVQAC--------GSMVTEEQPHAML--IPMEYFLMGY 303 (349)
Q Consensus 249 i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~--------gH~~~~e~p~~~~--~~i~~fl~~~ 303 (349)
++|++|.++ ...+.+.+.+... ..++++++++ +|..+. ... +.+.+||.+.
T Consensus 314 i~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~----~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 314 FHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWI----PTYENQEAIEWLFEQ 378 (380)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHH----HHHTCHHHHHHHHTC
T ss_pred EecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHH----HhcCCHHHHHHHHhh
Confidence 999999998 5667777777643 3789999999 775332 222 3788898764
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=7.7e-18 Score=149.62 Aligned_cols=114 Identities=17% Similarity=0.167 Sum_probs=86.2
Q ss_pred EccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCe---EEEEECCCCCCCC-----CCCCCC------------
Q 018916 36 IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHEFG-----AAAISD------------ 95 (349)
Q Consensus 36 ~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~---~vi~~D~~G~G~s-----~~~~~~------------ 95 (349)
..+++++++|||+||++++... |...+..+.++|| +|+++|+||||.| +.....
T Consensus 16 ~~g~~~~ppVVLlHG~g~s~~~------w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~ 89 (484)
T 2zyr_A 16 VAAAEDFRPVVFVHGLAGSAGQ------FESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQI 89 (484)
T ss_dssp -----CCCCEEEECCTTCCGGG------GHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGG
T ss_pred ccCCCCCCEEEEECCCCCCHHH------HHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccc
Confidence 3445577899999999988755 4455566667899 7999999999975 100000
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh---cccceeEEecCCCC
Q 018916 96 ---------------DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 155 (349)
Q Consensus 96 ---------------~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 155 (349)
.....+++++++++.+++++++.++++++||||||.+++.++.++| ++|+++|++++...
T Consensus 90 id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 90 IDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp SCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0112456777888888889899999999999999999999999998 48999999998764
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=146.58 Aligned_cols=178 Identities=12% Similarity=0.073 Sum_probs=117.1
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-------------------CCCC--
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-------------------DEPV-- 99 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~-------------------~~~~-- 99 (349)
..|+|||+||++++... |......+.++||.|+++|+||+|.|...... ....
T Consensus 97 ~~P~Vv~~HG~~~~~~~------~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTL------YSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETH 170 (383)
T ss_dssp CEEEEEEECCTTCCTTT------THHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHH
T ss_pred CCCEEEEcCCCCCCchH------HHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchh
Confidence 45789999999887644 33455677788999999999999876410000 0000
Q ss_pred ---CCHHHHHHHHHHHHHHc--------------------------CCCcEEEEEechhHHHHHHHHHhhhcccceeEEe
Q 018916 100 ---LSVDDLADQIAEVLNHF--------------------------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV 150 (349)
Q Consensus 100 ---~~~~~~~~~l~~~l~~l--------------------------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 150 (349)
..++..++|+..+++.+ +.+++.++|||+||.+++.++.+.+ +++++|++
T Consensus 171 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~ 249 (383)
T 3d59_A 171 IRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIAL 249 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEe
Confidence 11222345555554332 2357999999999999999887765 59999999
Q ss_pred cCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhc
Q 018916 151 SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN 230 (349)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (349)
++..... ..
T Consensus 250 ~~~~~p~---------------------------------------------~~-------------------------- 258 (383)
T 3d59_A 250 DAWMFPL---------------------------------------------GD-------------------------- 258 (383)
T ss_dssp SCCCTTC---------------------------------------------CG--------------------------
T ss_pred CCccCCC---------------------------------------------ch--------------------------
Confidence 8742100 00
Q ss_pred CCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcc--cceeEEEEcCCCCccccc-------------------Ch
Q 018916 231 GRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTEE-------------------QP 289 (349)
Q Consensus 231 ~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-------------------~p 289 (349)
+.+.++++|+|+++|++|...+....+ +.+.. ...+++.+++++|..+.+ ++
T Consensus 259 ------~~~~~i~~P~Lii~g~~D~~~~~~~~~-~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~ 331 (383)
T 3d59_A 259 ------EVYSRIPQPLFFINSEYFQYPANIIKM-KKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDS 331 (383)
T ss_dssp ------GGGGSCCSCEEEEEETTTCCHHHHHHH-HTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCH
T ss_pred ------hhhccCCCCEEEEecccccchhhHHHH-HHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCH
Confidence 012456799999999999876433333 33322 238899999999987532 34
Q ss_pred ----hhHHHHHHHHHhhc
Q 018916 290 ----HAMLIPMEYFLMGY 303 (349)
Q Consensus 290 ----~~~~~~i~~fl~~~ 303 (349)
+.+.+.+.+||++.
T Consensus 332 ~~~~~~~~~~~~~Fl~~~ 349 (383)
T 3d59_A 332 NVAIDLSNKASLAFLQKH 349 (383)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 33456788899876
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-15 Score=145.74 Aligned_cols=216 Identities=9% Similarity=0.021 Sum_probs=124.0
Q ss_pred hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--------------------CcEEEEEech
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--------------------GAVMCMGVTA 128 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--------------------~~v~lvGhS~ 128 (349)
..++++||.|+++|.||+|.|+... ..+.. +.++|+.++++.+.. ++|.++||||
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~----~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~Sy 349 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQ----TSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 349 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCC----CTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcC----CCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECH
Confidence 5677899999999999999987431 22333 567788888887752 4799999999
Q ss_pred hHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHH
Q 018916 129 GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQ 208 (349)
Q Consensus 129 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (349)
||.+++.+|.++|+.++++|.+++.... ........... ...+......+.+....+.. .... .......+
T Consensus 350 GG~ial~~Aa~~p~~lkaiV~~~~~~d~---~~~~~~~g~~~--~~~g~~~~~~~~l~~~~~~~-~~~~---g~~~~~~~ 420 (763)
T 1lns_A 350 LGTMAYGAATTGVEGLELILAEAGISSW---YNYYRENGLVR--SPGGFPGEDLDVLAALTYSR-NLDG---ADFLKGNA 420 (763)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSBH---HHHHBSSSSBC--CCTTCTTCCHHHHHHHHCGG-GGSH---HHHHHHHH
T ss_pred HHHHHHHHHHhCCcccEEEEEecccccH---HHHhhhcchhh--hcccCCchhhhHHhHHHHhh-hcCc---chhhhHHH
Confidence 9999999999999999999999886521 11000000000 00000000000011111111 0000 00000000
Q ss_pred HHH---Hhhh----hccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcC
Q 018916 209 ACR---RLLD----ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA 279 (349)
Q Consensus 209 ~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~ 279 (349)
.+. ..+. .... ....++. ..+....+.+|++|+|+++|.+|..+ ..+.++.+.+++...+..++.+
T Consensus 421 ~~~~~~~~~~~~~~~~~~-~~~~~w~----~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~ 495 (763)
T 1lns_A 421 EYEKRLAEMTAALDRKSG-DYNQFWH----DRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR 495 (763)
T ss_dssp HHHHHHHHHHHHHCTTTC-CCCHHHH----TTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES
T ss_pred HHHHHHHHHHhhhhhccC-chhHHhh----ccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeC
Confidence 000 0000 0000 0001111 13455678899999999999999988 5677788888741123345568
Q ss_pred CCCccccc-ChhhHHHHHHHHHhhc
Q 018916 280 CGSMVTEE-QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 280 ~gH~~~~e-~p~~~~~~i~~fl~~~ 303 (349)
+||..+.+ .+.++.+.+.+||++.
T Consensus 496 ~gH~~~~~~~~~~~~~~i~~Ffd~~ 520 (763)
T 1lns_A 496 GAHIYMNSWQSIDFSETINAYFVAK 520 (763)
T ss_dssp CSSCCCTTBSSCCHHHHHHHHHHHH
T ss_pred CcccCccccchHHHHHHHHHHHHHH
Confidence 99987655 5666778888887754
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.3e-17 Score=137.76 Aligned_cols=106 Identities=12% Similarity=0.123 Sum_probs=83.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccc-hhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFC-PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~-~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~ 118 (349)
..+++|||+||++.+.... |. .....+.++||+|+++|+||||.++. ..+.+++++.+.++++..+.
T Consensus 63 ~~~~pVVLvHG~~~~~~~~-----w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~-------~~~~~~la~~I~~l~~~~g~ 130 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQS-----FDSNWIPLSAQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITTLYAGSGN 130 (316)
T ss_dssp BCSSEEEEECCTTCCHHHH-----HTTTHHHHHHHTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEEECCCCCCcHHH-----HHHHHHHHHHHCCCeEEEecCCCCCCCcH-------HHHHHHHHHHHHHHHHHhCC
Confidence 3678999999999886321 32 33445556799999999999987531 23567778888888888898
Q ss_pred CcEEEEEechhHHHHHHHHHhh---hcccceeEEecCCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAP 157 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~ 157 (349)
++++|+||||||.++..++..+ +++|+++|++++.....
T Consensus 131 ~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt 172 (316)
T 3icv_A 131 NKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 172 (316)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred CceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCc
Confidence 9999999999999997777665 58999999999987643
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.9e-16 Score=133.35 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=83.6
Q ss_pred CCCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCC------------CC--CC
Q 018916 27 TSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP------------GH--EF 88 (349)
Q Consensus 27 ~~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~------------G~--G~ 88 (349)
.++..+.+..+-+ +..|+||++||++.+...++. .....+...||.|+++|+| |+ |.
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRD-----FWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHH-----HTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHH-----HHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 4566777665433 356899999999988765422 2223445679999999999 55 65
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCC
Q 018916 89 GAAAISDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLC 154 (349)
Q Consensus 89 s~~~~~~~~~~~~~~~~~~~l~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 154 (349)
|..+. ......++++.+.+..+.+.. +.++++|+||||||.+++.++.++|+ +++++|+.+++.
T Consensus 110 s~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 110 AGNPR--HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp TSCBC--CGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred cCCCC--cccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 54221 112345555555555554433 35789999999999999999999995 799999887544
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.70 E-value=9.1e-17 Score=137.98 Aligned_cols=115 Identities=12% Similarity=0.065 Sum_probs=93.8
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
+.+++|||+||++.+...+....+|......+.++||+|+++|+||+|.+..+ ..+.+++++++.++++.++.+
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~------~~~~~~l~~~i~~~l~~~~~~ 79 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP------NGRGEQLLAYVKTVLAATGAT 79 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST------TSHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC------CCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999987763221102366666677778999999999999987531 367899999999999999999
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (349)
+++++||||||.++..++.++|++|+++|+++++.......
T Consensus 80 ~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~G~~~a 120 (320)
T 1ys1_X 80 KVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFA 120 (320)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHH
T ss_pred CEEEEEECHhHHHHHHHHHhChhhceEEEEECCCCCCccHH
Confidence 99999999999999999999999999999999876554433
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-15 Score=129.15 Aligned_cols=187 Identities=17% Similarity=0.167 Sum_probs=116.6
Q ss_pred EEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCC------CCCCCCCCCC---CCC
Q 018916 32 LSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPP------GHEFGAAAIS---DDE 97 (349)
Q Consensus 32 l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~------G~G~s~~~~~---~~~ 97 (349)
+.|...+. +..|.|||+||+|.+...+.. ....+.. .++.+++++-| |.|.+--+.. ...
T Consensus 53 l~y~~~p~~~~~~~plVI~LHG~G~~~~~~~~------~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~ 126 (285)
T 4fhz_A 53 LTFGRRGAAPGEATSLVVFLHGYGADGADLLG------LAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSS 126 (285)
T ss_dssp CCEEEEESCTTCCSEEEEEECCTTBCHHHHHT------THHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCC
T ss_pred ceeecCCCCCCCCCcEEEEEcCCCCCHHHHHH------HHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcc
Confidence 44555443 245689999999988766422 1122222 47889988754 3332210000 000
Q ss_pred C---CCCHHHHHHHHHHHH----HHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh
Q 018916 98 P---VLSVDDLADQIAEVL----NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 98 ~---~~~~~~~~~~l~~~l----~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
. ...+.+.++++.+++ +..++ ++++++|+|+||.+++.++.++|+++.+++.+++....+
T Consensus 127 ~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~----------- 195 (285)
T 4fhz_A 127 ETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAP----------- 195 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCH-----------
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCc-----------
Confidence 0 011222233444443 34454 679999999999999999999999999999887642210
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 248 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 248 (349)
+.. .. ....+.|+++
T Consensus 196 --------------~~~-----~~----------------------------------------------~~~~~~Pvl~ 210 (285)
T 4fhz_A 196 --------------ERL-----AE----------------------------------------------EARSKPPVLL 210 (285)
T ss_dssp --------------HHH-----HH----------------------------------------------HCCCCCCEEE
T ss_pred --------------hhh-----hh----------------------------------------------hhhhcCcccc
Confidence 000 00 0012479999
Q ss_pred EEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 249 FVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 249 i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
++|++|+++ +..+++.+.+... +++++++++.||.+. +++ .+.+.+||++.-
T Consensus 211 ~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~L 266 (285)
T 4fhz_A 211 VHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKERL 266 (285)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHHC
T ss_pred eeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHHC
Confidence 999999998 5566666666543 378899999999764 444 467889999873
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-15 Score=132.16 Aligned_cols=115 Identities=8% Similarity=-0.091 Sum_probs=73.7
Q ss_pred CCCeEEEecCCCCChhhhhccc-cc--chhhhhhh-cCCeEEEEECCCCCCCCCCC-CCCCCC---CCCHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGL-FF--CPEACSLL-LHNFCIYHINPPGHEFGAAA-ISDDEP---VLSVDDLADQIAEV 112 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~-~~--~~~~~~~l-~~g~~vi~~D~~G~G~s~~~-~~~~~~---~~~~~~~~~~l~~~ 112 (349)
..|+|++.||.... ..+.... .+ ......++ ++||.|+++|+||+|.|... ...... .+.+.+.++.+..+
T Consensus 73 ~~PvV~~~HG~~~~-~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~ 151 (377)
T 4ezi_A 73 QVGIISYQHGTRFE-RNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKEL 151 (377)
T ss_dssp CEEEEEEECCCCCS-TTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCC-cccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHH
Confidence 45799999999743 2221110 00 02233455 89999999999999988631 110000 01223334444455
Q ss_pred HHHcCC---CcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCCC
Q 018916 113 LNHFGL---GAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (349)
Q Consensus 113 l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (349)
++.+++ ++++++|||+||.+++.+|..+|+ .+.+.+..+++...
T Consensus 152 ~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl 203 (377)
T 4ezi_A 152 ANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGW 203 (377)
T ss_dssp HHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCH
T ss_pred hhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCH
Confidence 565665 689999999999999999988776 46777777777654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.69 E-value=8.8e-17 Score=136.36 Aligned_cols=109 Identities=14% Similarity=0.054 Sum_probs=90.3
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
+.+|+|||+||++++...+.. ..|......+.++||+|+++|+||+|.+. .+.+++++++.++++.++.+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~-~~~~~~~~~L~~~G~~v~~~d~~g~g~s~---------~~~~~~~~~i~~~~~~~~~~ 74 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGV-DYWFGIPSALRRDGAQVYVTEVSQLDTSE---------VRGEQLLQQVEEIVALSGQP 74 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTE-ESSTTHHHHHHHTTCCEEEECCCSSSCHH---------HHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCeEEEeCCCCCCcccccc-ccHHHHHHHHHhCCCEEEEEeCCCCCCch---------hhHHHHHHHHHHHHHHhCCC
Confidence 467899999999877532111 23656666666789999999999998753 57899999999999999989
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (349)
+++++||||||.++..++.++|++|+++|+++++.....
T Consensus 75 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~g~~ 113 (285)
T 1ex9_A 75 KVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSD 113 (285)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCCH
T ss_pred CEEEEEECHhHHHHHHHHHhChhheeEEEEECCCCCCch
Confidence 999999999999999999999999999999998665443
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.68 E-value=8.5e-17 Score=138.66 Aligned_cols=117 Identities=12% Similarity=-0.002 Sum_probs=91.2
Q ss_pred CCCCeEEEecCCCCChhhhh----ccccc----chhhhhhhcCCeE---EEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018916 40 QDKPALVTYPDLALNYMSCF----QGLFF----CPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~----~~~~~----~~~~~~~l~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 108 (349)
..+++|||+||++.+...|. ....| ...+..+.++||+ |+++|++|+|.|..+.......+..++++++
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~ 117 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTF 117 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHH
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHH
Confidence 35678999999998653211 11235 5666677778998 9999999999875321111233567888889
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCCC
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKA 156 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 156 (349)
+.++++.++.++++|+||||||.+++.++.++ |++|+++|+++++...
T Consensus 118 I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 118 IDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 99999999999999999999999999999999 9999999999988754
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-17 Score=146.74 Aligned_cols=106 Identities=9% Similarity=0.023 Sum_probs=84.8
Q ss_pred CCCCeEEEecCCCCCh-hhhhcccccch-hhhhhhcC-CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Q 018916 40 QDKPALVTYPDLALNY-MSCFQGLFFCP-EACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~-~~~~~~~~~~~-~~~~~l~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (349)
+++|+|||+||+++++ .. |.. ....++++ +|+|+++|+||||.|..+ ....+++++++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~~~~~~------w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~----~~~~~~~~~~~dl~~li~~L 137 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDG------WLLDMCKKMFQVEKVNCICVDWRRGSRTEYT----QASYNTRVVGAEIAFLVQVL 137 (452)
T ss_dssp TTSEEEEEECCSCCTTCTT------HHHHHHHHHHTTCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCch------HHHHHHHHHHhhCCCEEEEEechhcccCchh----HhHhhHHHHHHHHHHHHHHH
Confidence 4678999999999876 33 333 22445443 999999999999987521 12356678888999988877
Q ss_pred ----CC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 117 ----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 ----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
++ ++++|+||||||.+|+.+|.++|++|.++++++|+..
T Consensus 138 ~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 138 STEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 54 8999999999999999999999999999999998754
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.9e-17 Score=146.65 Aligned_cols=106 Identities=10% Similarity=0.024 Sum_probs=84.6
Q ss_pred CCCCeEEEecCCCCCh-hhhhcccccch-hhhhhhcC-CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Q 018916 40 QDKPALVTYPDLALNY-MSCFQGLFFCP-EACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~-~~~~~~~~~~~-~~~~~l~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (349)
+++|+|||+||+++++ .. |.. .+..++++ +|+|+++|++|||.|..+ ....+++++++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~~~~~~------w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~----~~~~~~~~~~~dl~~~i~~L 137 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDS------WPSDMCKKILQVETTNCISVDWSSGAKAEYT----QAVQNIRIVGAETAYLIQQL 137 (452)
T ss_dssp TTSCEEEEECCTTCCSSSS------HHHHHHHHHHTTSCCEEEEEECHHHHTSCHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCCch------HHHHHHHHHHhhCCCEEEEEecccccccccH----HHHHhHHHHHHHHHHHHHHH
Confidence 4678999999998876 33 333 23444444 999999999999987521 12356678888888888777
Q ss_pred ----C--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 117 ----G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 ----~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+ .++++|+||||||.+|+.+|.++|++|.++++++|+..
T Consensus 138 ~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 138 LTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp HHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 5 68999999999999999999999999999999998754
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.7e-14 Score=120.95 Aligned_cols=123 Identities=11% Similarity=0.000 Sum_probs=83.1
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCC--CChhhhhcccccchhhhhhhcCCeEEEEECCCCCC-CCCCCCCCCCCCCCH-H
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLA--LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAISDDEPVLSV-D 103 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~--~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G-~s~~~~~~~~~~~~~-~ 103 (349)
.+..+.+. +-+++.|+|||+||++ .+...|.... .....+...++.|+++|.++.+ .++.... . ...+ +
T Consensus 21 ~~~~~~~~-~~P~~~p~vvllHG~~~~~~~~~w~~~~---~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~--~-~~~~~~ 93 (280)
T 1r88_A 21 MGRDIPVA-FLAGGPHAVYLLDAFNAGPDVSNWVTAG---NAMNTLAGKGISVVAPAGGAYSMYTNWEQD--G-SKQWDT 93 (280)
T ss_dssp TTEEEEEE-EECCSSSEEEEECCSSCCSSSCHHHHTS---CHHHHHTTSSSEEEEECCCTTSTTSBCSSC--T-TCBHHH
T ss_pred cCCcceEE-EeCCCCCEEEEECCCCCCCChhhhhhcc---cHHHHHhcCCeEEEEECCCCCCccCCCCCC--C-CCcHHH
Confidence 45566665 3333458999999995 3443432110 0112234568999999997652 2121101 1 1234 4
Q ss_pred HHHHHHHHHHHH-cCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 104 DLADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 104 ~~~~~l~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
.+++++..+++. ++++ +++|+||||||.+|+.+|.++|+++++++++++.....
T Consensus 94 ~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 150 (280)
T 1r88_A 94 FLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 150 (280)
T ss_dssp HHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcC
Confidence 456788888876 7765 89999999999999999999999999999999987654
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.8e-17 Score=144.72 Aligned_cols=107 Identities=7% Similarity=0.002 Sum_probs=82.5
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhh-hhhh-cCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~-~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (349)
+++|+|||+||++.++.. .|...+ ..++ ..+|+||++|+||||.|..+ ...++++.+++++.++++.+
T Consensus 67 ~~~p~vvliHG~~~s~~~-----~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~----~~~~~~~~v~~~la~ll~~L~ 137 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEE-----SWLSTMCQNMFKVESVNCICVDWKSGSRTAYS----QASQNVRIVGAEVAYLVGVLQ 137 (449)
T ss_dssp TTSEEEEEECCCCCTTCT-----THHHHHHHHHHHHCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCCCc-----cHHHHHHHHHHhcCCeEEEEEeCCcccCCccH----HHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999887521 143322 3343 46899999999999886421 11246677788888887665
Q ss_pred -----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 117 -----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 -----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+.++++|+||||||.+|+.+|.++|++|.++++++|+..
T Consensus 138 ~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 138 SSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 468999999999999999999999999999999998764
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-14 Score=122.52 Aligned_cols=126 Identities=10% Similarity=0.010 Sum_probs=83.1
Q ss_pred CeeEEEEEccC-CCCCeEEEecCC--CCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCCCCCC----CCC
Q 018916 29 HGSLSVTIYGD-QDKPALVTYPDL--ALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISDDE----PVL 100 (349)
Q Consensus 29 ~~~l~~~~~g~-~~~p~vv~lHG~--~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~~~~~----~~~ 100 (349)
+.++.++.... +..|+|||+||+ +.+...|.... .....+...++.|+++|.++. +.++...+... ...
T Consensus 20 ~~~i~v~~~p~~~~~p~vvllHG~~~~~~~~~w~~~~---~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~ 96 (304)
T 1sfr_A 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINT---PAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTY 96 (304)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHC---CHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECC
T ss_pred CCceEEEECCCCCCCCEEEEeCCCCCCCCcchhhcCC---CHHHHHhcCCeEEEEECCCCCccccccCCccccccccccc
Confidence 44565553221 457899999999 44554432211 011223356899999999775 22221100000 134
Q ss_pred CHHHH-HHHHHHHHHH-cCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 101 SVDDL-ADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 101 ~~~~~-~~~l~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
.++++ ++++..++++ +++. +++|+||||||.+|+.++.++|+++++++++++.....
T Consensus 97 ~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 97 KWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp BHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 56665 4788888865 6655 89999999999999999999999999999999887543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.4e-15 Score=138.96 Aligned_cols=123 Identities=11% Similarity=0.021 Sum_probs=87.1
Q ss_pred eeEEeC-CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhh-hhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 22 DNLIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 22 ~~~i~~-~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~-~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
...+.+ +|.+|++..+.+. ..|+||++||++.....+. . |.... ..+.++||.|+++|+||+|.|......
T Consensus 11 ~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~--~-y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~- 86 (587)
T 3i2k_A 11 NVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAW--S-TQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP- 86 (587)
T ss_dssp EEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHH--H-TTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT-
T ss_pred EEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccc--c-chhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc-
Confidence 345666 5667887766442 3478999999877643221 0 11122 567789999999999999998743221
Q ss_pred CCCCCHHHHHHHHHHHHHHcC-----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 97 EPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
+...++|+.++++.+. ..++.++||||||.+++.+|.++|+.++++|.+++.
T Consensus 87 -----~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 87 -----HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp -----TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred -----ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 1234555555554442 258999999999999999999999999999999987
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-14 Score=122.16 Aligned_cols=126 Identities=10% Similarity=0.053 Sum_probs=84.5
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCCC--ChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCCCCCC----CCC
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISDDE----PVL 100 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~~--~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~~~~~----~~~ 100 (349)
.+..+.++..... +++|||+||++. +...|.... .....+...++.|+++|.+|. +.++...+... ..+
T Consensus 16 ~~~~~~v~~~p~~-~~~v~llHG~~~~~~~~~w~~~~---~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~ 91 (280)
T 1dqz_A 16 MGRDIKVQFQGGG-PHAVYLLDGLRAQDDYNGWDINT---PAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTY 91 (280)
T ss_dssp TTEEEEEEEECCS-SSEEEECCCTTCCSSSCHHHHHS---CHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCC
T ss_pred cCceeEEEEcCCC-CCEEEEECCCCCCCCcccccccC---cHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccc
Confidence 3445665554322 469999999953 554432211 111234456899999998764 22221111100 235
Q ss_pred CHHHH-HHHHHHHHHH-cCCC--cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 101 SVDDL-ADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 101 ~~~~~-~~~l~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
.++++ ++++..++++ ++++ +++|+||||||.+|+.++.++|+++++++++++.....
T Consensus 92 ~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 92 KWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp BHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccccc
Confidence 66664 5888888876 7764 89999999999999999999999999999999887653
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-16 Score=141.58 Aligned_cols=106 Identities=10% Similarity=0.041 Sum_probs=82.5
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchh-hhhhhcC-CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPE-ACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~-~~~~l~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (349)
+++|+|||+||++.++.. .|... ...++++ +|+||++|+||+|.+..+ ...++++.+++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~s~~~-----~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~----~~~~~~~~~a~~l~~ll~~L~ 138 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEE-----NWLLDMCKNMFKVEEVNCICVDWKKGSQTSYT----QAANNVRVVGAQVAQMLSMLS 138 (450)
T ss_dssp TTSEEEEEECCCCCTTCT-----THHHHHHHHHTTTCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCc-----chHHHHHHHHHhcCCeEEEEEeCccccCCcch----HHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999887631 14332 2344543 899999999999875411 12356778888888888766
Q ss_pred -----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 117 -----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 -----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+.++++|+||||||.+|..+|.++|+ |.++++++|+..
T Consensus 139 ~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 139 ANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred HhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 46899999999999999999999999 999999998764
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=5e-15 Score=131.87 Aligned_cols=112 Identities=16% Similarity=0.166 Sum_probs=82.3
Q ss_pred CCCeEEEecCCCCChhhhhc-ccccchhhhhhhc-CCeEEEEECCCCCCCCCCCC------CCCCCCCCHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQ-GLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAI------SDDEPVLSVDDLADQIAEV 112 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~-~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~------~~~~~~~~~~~~~~~l~~~ 112 (349)
.+.+|||+||..++...... .-++ ..+.+ .++.|+++|+||||+|.+.. .......+.+++++|+..+
T Consensus 37 ~g~Pi~l~~Ggeg~~~~~~~~~g~~----~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 37 NGGSILFYTGNEGDIIWFCNNTGFM----WDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp TTCEEEEEECCSSCHHHHHHHCHHH----HHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcchhhhhcccHH----HHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 44568888998776543221 1111 22222 27899999999999996421 1122345789999999999
Q ss_pred HHHcCC-------CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 113 LNHFGL-------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 113 l~~l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
+++++. .+++++||||||++|+.++.++|+.|.++|+.+++...
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQ 163 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTTC
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchhc
Confidence 987754 38999999999999999999999999999998866543
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-16 Score=139.43 Aligned_cols=107 Identities=8% Similarity=0.026 Sum_probs=83.2
Q ss_pred CCCCeEEEecCCCCCh-hhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018916 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~-~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l- 116 (349)
+++|+|||+||+++++ ..|... ....+++ .+|+|+++|+||+|.|..+ ....+++++++++.++++.+
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~-----~~~~l~~~~~~~Vi~~D~~g~g~s~~~----~~~~~~~~~~~dl~~~i~~l~ 138 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSD-----MCKNMFQVEKVNCICVDWKGGSKAQYS----QASQNIRVVGAEVAYLVQVLS 138 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHH-----HHHHHHHHCCEEEEEEECHHHHTSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHH-----HHHHHHhcCCcEEEEEECccccCccch----hhHhhHHHHHHHHHHHHHHHH
Confidence 4678999999999887 343211 2234444 6999999999999987521 12245677788888888766
Q ss_pred ---C--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 117 ---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 ---~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
+ .++++|+||||||.+|+.+|.++|+++.++++++|...
T Consensus 139 ~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 139 TSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 4 67999999999999999999999999999999998654
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-13 Score=114.08 Aligned_cols=190 Identities=9% Similarity=0.087 Sum_probs=116.9
Q ss_pred eEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhh--hcCCeEEEEECCCCC---------CCC---CCCCC
Q 018916 31 SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSL--LLHNFCIYHINPPGH---------EFG---AAAIS 94 (349)
Q Consensus 31 ~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~--l~~g~~vi~~D~~G~---------G~s---~~~~~ 94 (349)
.+.|....| +.+.+|||+||+|.++..+. .....+ ...++.+++++-|-. |.+ .....
T Consensus 24 ~l~y~ii~P~~~~~~~VI~LHG~G~~~~dl~------~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~ 97 (246)
T 4f21_A 24 AMNYELMEPAKQARFCVIWLHGLGADGHDFV------DIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLD 97 (246)
T ss_dssp CCCEEEECCSSCCCEEEEEEEC--CCCCCGG------GGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC-
T ss_pred CcCceEeCCCCcCCeEEEEEcCCCCCHHHHH------HHHHHhhhcCCCeEEEeCCCCccccccCCCCCccccccccccc
Confidence 456666654 34569999999998876532 111111 124788888875321 000 00000
Q ss_pred C-----CCCCCCHHHHHHHHHHHHH---Hc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh
Q 018916 95 D-----DEPVLSVDDLADQIAEVLN---HF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (349)
Q Consensus 95 ~-----~~~~~~~~~~~~~l~~~l~---~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (349)
. ......+.+.++.+..+++ .. ..++++++|+|+||++++.++.++|+++.+++.+++......
T Consensus 98 ~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~------ 171 (246)
T 4f21_A 98 ANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWD------ 171 (246)
T ss_dssp --CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHH------
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccc------
Confidence 0 0011234555555555553 22 346899999999999999999999999999999887543210
Q ss_pred hhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCC
Q 018916 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 244 (349)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 244 (349)
.+ .. .. . ....++
T Consensus 172 -----------------------~~-~~-~~-------~-----------------------------------~~~~~~ 184 (246)
T 4f21_A 172 -----------------------NF-KG-KI-------T-----------------------------------SINKGL 184 (246)
T ss_dssp -----------------------HH-ST-TC-------C-----------------------------------GGGTTC
T ss_pred -----------------------cc-cc-cc-------c-----------------------------------ccccCC
Confidence 00 00 00 0 001247
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
|+++++|++|+++ ...++..+.+... ++++..+++.||.+. +++ .+.+.+||++.
T Consensus 185 Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~~~~fL~k~ 243 (246)
T 4f21_A 185 PILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEE-IKDISNFIAKT 243 (246)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHH-HHHHHHHHHHH
T ss_pred chhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHH-HHHHHHHHHHH
Confidence 9999999999999 5566667766543 378899999999764 444 46688999874
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.53 E-value=9.1e-13 Score=123.46 Aligned_cols=135 Identities=10% Similarity=0.055 Sum_probs=85.5
Q ss_pred ceeEEeC-CCeeEEEEEccCC---CCCeEEEecCCCCChhh-hhcccccch---hh-hhhhcCCeEEEEECCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYMS-CFQGLFFCP---EA-CSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~-~~~~~~~~~---~~-~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
+...+.. +|.+|++..+.+. ..|+||++||++.+... .+....|.. .. ..+.++||.|+.+|+||+|.|..
T Consensus 26 ~~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 26 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 4445655 5668887776543 34788889998765300 000000100 11 45678899999999999998875
Q ss_pred CCCCCC------CC---CCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 92 AISDDE------PV---LSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 92 ~~~~~~------~~---~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
...... .. ...+|..+.+..+.+.... .++.++||||||.+++.+|..+|++++++|.+++...
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 322110 00 2233333333333332122 4899999999999999999888999999999998876
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.6e-16 Score=137.24 Aligned_cols=118 Identities=9% Similarity=0.068 Sum_probs=79.1
Q ss_pred CCCCeEEEecCCCCChhh--hhcccccc----hhhhhhhcCCeEEEEECCCCCCCCCCCCCC---------------CCC
Q 018916 40 QDKPALVTYPDLALNYMS--CFQGLFFC----PEACSLLLHNFCIYHINPPGHEFGAAAISD---------------DEP 98 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~--~~~~~~~~----~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~---------------~~~ 98 (349)
..+++|||+||++++... +....+|. .....+.++||+|+++|+||||.|...... ...
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 467899999999775321 01112353 344555578999999999999876410000 000
Q ss_pred CCCHHHHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHh--------------------------hhcccceeEEec
Q 018916 99 VLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMK--------------------------YRHRVLGLILVS 151 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~--------------------------~p~~v~~lvl~~ 151 (349)
.++++++++++.+++++++. ++++|+||||||.+++.+|.. +|++|.++|+++
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~ 209 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIA 209 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEES
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEEC
Confidence 12333344455556666653 799999999999999998876 578999999999
Q ss_pred CCCCCC
Q 018916 152 PLCKAP 157 (349)
Q Consensus 152 ~~~~~~ 157 (349)
++....
T Consensus 210 tP~~Gs 215 (431)
T 2hih_A 210 TPHNGT 215 (431)
T ss_dssp CCTTCC
T ss_pred CCCCCc
Confidence 876543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=8.6e-13 Score=113.71 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=74.5
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~- 118 (349)
+.+++++|+||++++... |... ...+. +.|+++|+|+. . ...+++++++++.+.++.+..
T Consensus 44 ~~~~~l~~~hg~~g~~~~------~~~~-~~~l~--~~v~~~~~~~~---~-------~~~~~~~~a~~~~~~i~~~~~~ 104 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTTV------FHSL-ASRLS--IPTYGLQCTRA---A-------PLDSIHSLAAYYIDCIRQVQPE 104 (316)
T ss_dssp CSSCCEEEECCTTCCSGG------GHHH-HHHCS--SCEEEECCCTT---S-------CTTCHHHHHHHHHHHHTTTCSS
T ss_pred CCCCeEEEECCCCCCHHH------HHHH-HHhcC--CCEEEEECCCC---C-------CcCCHHHHHHHHHHHHHHhCCC
Confidence 467889999999888654 3222 23343 99999999931 1 136899999999999988763
Q ss_pred CcEEEEEechhHHHHHHHHHhhh---cc---cceeEEecCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYR---HR---VLGLILVSPLC 154 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p---~~---v~~lvl~~~~~ 154 (349)
++++++||||||.+|+++|.+.+ +. +.+++++++..
T Consensus 105 ~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 105 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp CCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 78999999999999999998875 35 89999998764
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6.4e-13 Score=125.04 Aligned_cols=136 Identities=11% Similarity=0.068 Sum_probs=84.9
Q ss_pred ceeEEeC-CCeeEEEEEccCC---CCCeEEEecCCCCChhhh--hcccccc---hhh-hhhhcCCeEEEEECCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSC--FQGLFFC---PEA-CSLLLHNFCIYHINPPGHEFGA 90 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~--~~~~~~~---~~~-~~~l~~g~~vi~~D~~G~G~s~ 90 (349)
+...+.+ +|.+|+...+.+. ..|+||++||++...... +....|. ... ..+.++||.|+.+|.||+|.|.
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 4556666 5557877665443 347888889887552110 1000000 111 4567889999999999999887
Q ss_pred CCCCCCC------C---CCCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 91 AAISDDE------P---VLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 91 ~~~~~~~------~---~~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
....... . ....+|..+.+..+.+.... .++.++|||+||.+++.+|.+.|+.++++|.+++....
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 5332110 0 02223333332222222122 48999999999999999999889999999999987653
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.1e-13 Score=115.77 Aligned_cols=110 Identities=10% Similarity=0.034 Sum_probs=74.2
Q ss_pred CCCCeEEEecCCCCChhh-hhcccccchhh----hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---
Q 018916 40 QDKPALVTYPDLALNYMS-CFQGLFFCPEA----CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE--- 111 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~-~~~~~~~~~~~----~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~--- 111 (349)
+.+++|||+||++++... +....+|.... ..+.++||+|+++|+||||.+.. ...++.+.+..
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 466789999999876432 11112354332 45557799999999999986531 11222222221
Q ss_pred ---------------------HHHH-cCCCcEEEEEechhHHHHHHHHHh-------------------hh------ccc
Q 018916 112 ---------------------VLNH-FGLGAVMCMGVTAGAYILTLFAMK-------------------YR------HRV 144 (349)
Q Consensus 112 ---------------------~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~-------------------~p------~~v 144 (349)
++++ .+.++++||||||||.++..++.+ +| ++|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 1122 567899999999999999999873 25 789
Q ss_pred ceeEEecCCCCCCC
Q 018916 145 LGLILVSPLCKAPS 158 (349)
Q Consensus 145 ~~lvl~~~~~~~~~ 158 (349)
.++|+++++.....
T Consensus 155 ~sLV~i~tP~~Gs~ 168 (387)
T 2dsn_A 155 LSVTTIATPHDGTT 168 (387)
T ss_dssp EEEEEESCCTTCCG
T ss_pred eEEEEECCCCCCcH
Confidence 99999998765443
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-11 Score=103.27 Aligned_cols=125 Identities=8% Similarity=-0.009 Sum_probs=82.1
Q ss_pred eEEeCCCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcc-cccchhhhhhhcC----CeEEEEECCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQG-LFFCPEACSLLLH----NFCIYHINPPGHEFGAA 91 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~-~~~~~~~~~~l~~----g~~vi~~D~~G~G~s~~ 91 (349)
..+...++.+.+.++-|. ..|+||++||.+.+...|+.. ......+..+.++ +|.|+++|.+|- +.
T Consensus 44 ~~~~s~~~~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~~- 120 (297)
T 1gkl_A 44 ETYTGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--NC- 120 (297)
T ss_dssp EEEEETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--TC-
T ss_pred EEEEcCCCEEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--cc-
Confidence 334444557766666543 346889999998776544321 0011223344444 599999998763 22
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc-CC--------------CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 92 AISDDEPVLSVDDLADQIAEVLNHF-GL--------------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l-~~--------------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
. ...+ .+.+++++..+++.. .. .++.++|+||||.+++.++.++|+++++++.+++...
T Consensus 121 ---~-~~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 121 ---T-AQNF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 194 (297)
T ss_dssp ---C-TTTH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred ---c-hHHH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccc
Confidence 1 1111 345567777777643 32 4589999999999999999999999999999998754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-12 Score=114.39 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=69.8
Q ss_pred CCeEEEecCCCCChhhhhcccc--------------c-chhhhhh-hcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHH
Q 018916 42 KPALVTYPDLALNYMSCFQGLF--------------F-CPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~--------------~-~~~~~~~-l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 105 (349)
.|+|.+-||..+.+..|-.+.. + ...+..+ +++||.|+++|++|+|.+- . .....-...
T Consensus 106 ~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y---~--~~~~~~~~v 180 (462)
T 3guu_A 106 PKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAF---I--AGYEEGMAI 180 (462)
T ss_dssp CEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCT---T--CHHHHHHHH
T ss_pred CcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcc---c--CCcchhHHH
Confidence 6789999998765433311100 0 0224556 8999999999999998531 1 111111223
Q ss_pred HHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHhhhc-----ccceeEEecCCCCC
Q 018916 106 ADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (349)
Q Consensus 106 ~~~l~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (349)
.+.+.+..+..++ .++.++|||+||..++..|...|+ .+.+.+..+++...
T Consensus 181 lD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl 239 (462)
T 3guu_A 181 LDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSA 239 (462)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBH
T ss_pred HHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCH
Confidence 3344443333233 689999999999999988776553 48888888887654
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-11 Score=113.04 Aligned_cols=130 Identities=15% Similarity=0.145 Sum_probs=88.8
Q ss_pred ceeEEeC-CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhc---------------cc-cc-chhhhhhhcCCeEEE
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ---------------GL-FF-CPEACSLLLHNFCIY 79 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~---------------~~-~~-~~~~~~~l~~g~~vi 79 (349)
+...|.. +|.+|+...+-+. ..|+||+.||++.+....+. .+ -| ......+.++||.|+
T Consensus 42 ~~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 42 KDGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 3445665 5667877766543 34789999999876321010 00 01 012346778999999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-----CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCC
Q 018916 80 HINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (349)
Q Consensus 80 ~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (349)
++|.||+|.|..... .+. ....+|+.++++.+.. .++.++|||+||.+++.+|+..|..++++|..++..
T Consensus 122 ~~D~RG~G~S~G~~~----~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~ 196 (560)
T 3iii_A 122 KVALRGSDKSKGVLS----PWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLN 196 (560)
T ss_dssp EEECTTSTTCCSCBC----TTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCC
T ss_pred EEcCCCCCCCCCccc----cCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcc
Confidence 999999999874321 122 3445566665554421 579999999999999999999999999999998875
Q ss_pred C
Q 018916 155 K 155 (349)
Q Consensus 155 ~ 155 (349)
.
T Consensus 197 d 197 (560)
T 3iii_A 197 D 197 (560)
T ss_dssp B
T ss_pred c
Confidence 4
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-11 Score=108.95 Aligned_cols=133 Identities=8% Similarity=0.070 Sum_probs=83.2
Q ss_pred ceeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhccc--------ccc----hhhhhhhcCCeEEEEECC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGL--------FFC----PEACSLLLHNFCIYHINP 83 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~--------~~~----~~~~~~l~~g~~vi~~D~ 83 (349)
+...+.+ ++..+....+-| +..|+||++||.+++........ .|. .....+.++||.|+++|+
T Consensus 88 e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~ 167 (391)
T 3g8y_A 88 EKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDN 167 (391)
T ss_dssp EEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCC
T ss_pred EEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecC
Confidence 3444444 455666555432 24579999999988754221000 011 234567788999999999
Q ss_pred CCCCCCCCCCCC-CCCCCCHHHHH---------------HHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhh
Q 018916 84 PGHEFGAAAISD-DEPVLSVDDLA---------------DQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 84 ~G~G~s~~~~~~-~~~~~~~~~~~---------------~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
||+|.+..+... ....+..+.++ .|+..+++.+ +.+++.++||||||.+++.+|...
T Consensus 168 rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~- 246 (391)
T 3g8y_A 168 AAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD- 246 (391)
T ss_dssp TTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-
T ss_pred CCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-
Confidence 999987632110 00113444433 4555555543 235789999999999999877754
Q ss_pred cccceeEEecCCC
Q 018916 142 HRVLGLILVSPLC 154 (349)
Q Consensus 142 ~~v~~lvl~~~~~ 154 (349)
++|+++|++++..
T Consensus 247 ~~i~a~v~~~~~~ 259 (391)
T 3g8y_A 247 KDIYAFVYNDFLC 259 (391)
T ss_dssp TTCCEEEEESCBC
T ss_pred CceeEEEEccCCC
Confidence 5799999887644
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-10 Score=102.23 Aligned_cols=182 Identities=12% Similarity=0.085 Sum_probs=109.9
Q ss_pred CCeeEEEEEccC-----CCCCeEEEecCCCCChhhhhc-ccccchhhhhhhcCCeE----EEEECCCCCC-CCCCCCCCC
Q 018916 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQ-GLFFCPEACSLLLHNFC----IYHINPPGHE-FGAAAISDD 96 (349)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~-~~~~~~~~~~~l~~g~~----vi~~D~~G~G-~s~~~~~~~ 96 (349)
.+....+.++-+ ...|+|+++||.+ |.. ..++ ..+..+.++|+. |+++|.+|++ ++.. ..
T Consensus 178 ~g~~~~~~vy~P~~~~~~~~PvlvllHG~~-----~~~~~~~~-~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~-~~-- 248 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVTAEERPLAVLLDGEF-----WAQSMPVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHRAHE-LP-- 248 (403)
T ss_dssp TTEEEEEEEEEC-----CCCCEEEESSHHH-----HHHTSCCH-HHHHHHHHTTSSCSCEEEEECCCSHHHHHHH-SS--
T ss_pred cCCcEEEEEEeCCCCCCCCCCEEEEeCCHH-----HhhcCcHH-HHHHHHHHcCCCCCeEEEEECCCCCcccccc-CC--
Confidence 344555555543 2468999999942 211 1111 233455566654 9999998742 2210 00
Q ss_pred CCCCCH-HHHHHHHHHHHHH-cCC----CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 97 EPVLSV-DDLADQIAEVLNH-FGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 97 ~~~~~~-~~~~~~l~~~l~~-l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
. ...+ +.+++++..+++. ++. ++++++||||||.+++.++.++|+++.+++++++........
T Consensus 249 ~-~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~---------- 317 (403)
T 3c8d_A 249 C-NADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG---------- 317 (403)
T ss_dssp S-CHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT----------
T ss_pred C-hHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC----------
Confidence 0 1122 3334566666654 432 579999999999999999999999999999999876422100
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
. .. ...+.+.+ . . . .......|+++++
T Consensus 318 -----~--------------~~----------~~~~~~~~----------------~---~-~----~~~~~~~~i~l~~ 344 (403)
T 3c8d_A 318 -----G--------------QQ----------EGVLLEKL----------------K---A-G----EVSAEGLRIVLEA 344 (403)
T ss_dssp -----S--------------SS----------CCHHHHHH----------------H---T-T----SSCCCSCEEEEEE
T ss_pred -----C--------------Cc----------HHHHHHHH----------------H---h-c----cccCCCceEEEEe
Confidence 0 00 11111100 0 0 0 0123467899999
Q ss_pred eCCCccc-hhHHHHHHHhccc--ceeEEEEcCCCCc
Q 018916 251 GESSPFH-SEAVHMTSKIDRR--YSALVEVQACGSM 283 (349)
Q Consensus 251 g~~D~~~-~~~~~~~~~~~~~--~~~~~~i~~~gH~ 283 (349)
|+.|..+ +..+.+.+.+... ++++.++++ ||.
T Consensus 345 G~~D~~~~~~~~~l~~~L~~~G~~v~~~~~~G-gH~ 379 (403)
T 3c8d_A 345 GIREPMIMRANQALYAQLHPIKESIFWRQVDG-GHD 379 (403)
T ss_dssp ESSCHHHHHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCEEEEEeCC-CCC
Confidence 9988654 6777888888754 378999997 686
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=103.31 Aligned_cols=131 Identities=9% Similarity=0.060 Sum_probs=80.5
Q ss_pred ceeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhc---------ccccc----hhhhhhhcCCeEEEEEC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQ---------GLFFC----PEACSLLLHNFCIYHIN 82 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~---------~~~~~----~~~~~~l~~g~~vi~~D 82 (349)
+...+.+ ++..+....+-| +..|+||++||.+.+...... .. |. .....+.++||.|+++|
T Consensus 93 e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~-y~~~~~~~a~~la~~Gy~Vl~~D 171 (398)
T 3nuz_A 93 EKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDR-YKDPKLTQALNFVKEGYIAVAVD 171 (398)
T ss_dssp EEEEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCS-TTCTTTCHHHHHHTTTCEEEEEC
T ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCccccccccccccccccc-ccchHHHHHHHHHHCCCEEEEec
Confidence 3344444 455666555432 245799999999876542110 00 11 23456778899999999
Q ss_pred CCCCCCCCCCCCCCC-CCCC---------------HHHHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHHhh
Q 018916 83 PPGHEFGAAAISDDE-PVLS---------------VDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 83 ~~G~G~s~~~~~~~~-~~~~---------------~~~~~~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+||+|.+........ ..+. ....+.|+...++.+. .+++.++||||||.+++.+++..
T Consensus 172 ~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~ 251 (398)
T 3nuz_A 172 NPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD 251 (398)
T ss_dssp CTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC
T ss_pred CCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC
Confidence 999998763210000 0011 1122345555555543 25799999999999999877765
Q ss_pred hcccceeEEecCC
Q 018916 141 RHRVLGLILVSPL 153 (349)
Q Consensus 141 p~~v~~lvl~~~~ 153 (349)
++|+++|.++..
T Consensus 252 -~~i~a~v~~~~~ 263 (398)
T 3nuz_A 252 -TSIYAFVYNDFL 263 (398)
T ss_dssp -TTCCEEEEESCB
T ss_pred -CcEEEEEEeccc
Confidence 568988887553
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.13 E-value=4.1e-09 Score=88.70 Aligned_cols=196 Identities=11% Similarity=0.095 Sum_probs=111.4
Q ss_pred ceeEEeC--CCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCC---eEEEEECCCCCC-
Q 018916 21 KDNLIKT--SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHN---FCIYHINPPGHE- 87 (349)
Q Consensus 21 ~~~~i~~--~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g---~~vi~~D~~G~G- 87 (349)
+...+.. .+..+.+.++-|+ .-|+|+++||.+..... .. |......+. ..| +-|+.+|.|+.+
T Consensus 19 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~--~~--~~~~~~~~~~~~g~~~~ivV~i~~~~~~~ 94 (275)
T 2qm0_A 19 EQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTF--HE--AVKIQSVRAEKTGVSPAIIVGVGYPIEGA 94 (275)
T ss_dssp EEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHH--HH--HHHHHGGGHHHHCCCCCEEEEEECSCSSS
T ss_pred eEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHH--HH--HHHHHhhcchhcCCCCeEEEEECCCCCCc
Confidence 3444544 3567777776653 23789999997531111 00 111111222 235 999999998731
Q ss_pred ---------CCCCC----CCCC------CCCC---CHHHH-HHHHHHHHH-HcCC--CcEEEEEechhHHHHHHHHHhhh
Q 018916 88 ---------FGAAA----ISDD------EPVL---SVDDL-ADQIAEVLN-HFGL--GAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 88 ---------~s~~~----~~~~------~~~~---~~~~~-~~~l~~~l~-~l~~--~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
.+... .+.. .... .+.++ .+++..+++ .++. ++++++||||||.+++.++.++|
T Consensus 95 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p 174 (275)
T 2qm0_A 95 FSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNL 174 (275)
T ss_dssp CCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCG
T ss_pred CcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCc
Confidence 11100 0000 0111 12222 244444554 3444 57999999999999999999999
Q ss_pred cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchh
Q 018916 142 HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSN 221 (349)
Q Consensus 142 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (349)
+.+++++++++.... . . ..+... .+.....
T Consensus 175 ~~f~~~~~~s~~~~~------~-------------------~---~~~~~~----------~~~~~~~------------ 204 (275)
T 2qm0_A 175 NAFQNYFISSPSIWW------N-------------------N---KSVLEK----------EENLIIE------------ 204 (275)
T ss_dssp GGCSEEEEESCCTTH------H-------------------H---HGGGGG----------TTHHHHH------------
T ss_pred hhhceeEEeCceeee------C-------------------h---HHHHHH----------HHHHHhh------------
Confidence 999999999886420 0 0 000000 0000000
Q ss_pred HHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHh---ccc--ceeEEEEcCCCCccc
Q 018916 222 VWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI---DRR--YSALVEVQACGSMVT 285 (349)
Q Consensus 222 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~---~~~--~~~~~~i~~~gH~~~ 285 (349)
.. ......|+++++|+.|..+ ...+++.+.+ ... ..++.++++++|+..
T Consensus 205 ----~~-----------~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 205 ----LN-----------NAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp ----HH-----------TCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred ----hc-----------ccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 00 1234579999999999764 6677788877 332 368889999999754
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-06 Score=75.11 Aligned_cols=129 Identities=6% Similarity=-0.034 Sum_probs=83.1
Q ss_pred HHHHHHHH-HcCC-CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHH
Q 018916 107 DQIAEVLN-HFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (349)
Q Consensus 107 ~~l~~~l~-~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
+++...++ .+.. ....++||||||..++.++.++|+.+.+++.++|.......
T Consensus 123 ~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~~------------------------- 177 (331)
T 3gff_A 123 KELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSP------------------------- 177 (331)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTTT-------------------------
T ss_pred HHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCChH-------------------------
Confidence 34444443 3332 23478999999999999999999999999999986532110
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc-------c
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF-------H 257 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~-------~ 257 (349)
.+.+.....+ .. ....+.|+++.+|+.|.. +
T Consensus 178 --------------------~~~~~~~~~~------------~~----------~~~~~~~l~l~~G~~d~~~~~~~~~~ 215 (331)
T 3gff_A 178 --------------------HYLTLLEERV------------VK----------GDFKQKQLFMAIANNPLSPGFGVSSY 215 (331)
T ss_dssp --------------------HHHHHHHHHH------------HH----------CCCSSEEEEEEECCCSEETTTEECCH
T ss_pred --------------------HHHHHHHHHh------------hc----------ccCCCCeEEEEeCCCCCCCccchHHH
Confidence 0000000000 00 001247899999999982 2
Q ss_pred --hhHHHHHHHhcc-----cceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 258 --SEAVHMTSKIDR-----RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 258 --~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+..+++.+.+.. .++++.++++.+|.... +..+.+.+..++....
T Consensus 216 ~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 216 HKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhcC
Confidence 445666665543 24788999999997655 6778888888887764
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-05 Score=67.80 Aligned_cols=111 Identities=14% Similarity=0.131 Sum_probs=65.9
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC-------CC------C------CCCCCH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI-------SD------D------EPVLSV 102 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~-------~~------~------~~~~~~ 102 (349)
-|+|.++||++++...|...-- ........+..++.+|..-.+...... .. + ...+.+
T Consensus 49 ~PVLYlLhG~~~~~~~w~~~~~---~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~ 125 (299)
T 4fol_A 49 IPTVFYLSGLTCTPDNASEKAF---WQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQM 125 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSC---HHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBH
T ss_pred cCEEEEECCCCCChHHHHHhch---HhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccH
Confidence 4899999999999877643221 112223447888888753222111000 00 0 001223
Q ss_pred H-HHHHHHHHHHH-HcCC---------CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCC
Q 018916 103 D-DLADQIAEVLN-HFGL---------GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (349)
Q Consensus 103 ~-~~~~~l~~~l~-~l~~---------~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (349)
+ -+++++..+++ .+.. ++..+.||||||.-|+.+|.++ |++..++...++...
T Consensus 126 ~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 126 YDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 3 34667766664 3332 4578999999999999999986 556666666665543
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=6.6e-07 Score=76.21 Aligned_cols=124 Identities=10% Similarity=0.124 Sum_probs=73.8
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccc-eeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVL-GLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~-~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
++|+|.|+|+||++++.++..+|+.+. +++++++......... . . ...+.. .+
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~----~----~---------------~~~~~~-~~-- 64 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQ----Y----Y---------------TSCMYN-GY-- 64 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSS----C----G---------------GGGSTT-CC--
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchH----H----H---------------HHHhhc-cC--
Confidence 679999999999999999999999998 8887776432211000 0 0 000000 00
Q ss_pred CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc-CCceEEEEeCCCccc--hhHHHHHHHhccc----
Q 018916 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFH--SEAVHMTSKIDRR---- 270 (349)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~--~~~~~~~~~~~~~---- 270 (349)
......+.+...+.. .....+.++ ..|++++||++|.++ ..++++.+.+...
T Consensus 65 ----~~~~~~~~~~~~~~~-----------------~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~ 123 (318)
T 2d81_A 65 ----PSITTPTANMKSWSG-----------------NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSA 123 (318)
T ss_dssp ----CCCHHHHHHHHHHBT-----------------TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGG
T ss_pred ----CCCCCHHHHHHHhhc-----------------ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCc
Confidence 000001111111100 111112222 369999999999999 5667777777542
Q ss_pred ceeEEEEcCCCCcccccCh
Q 018916 271 YSALVEVQACGSMVTEEQP 289 (349)
Q Consensus 271 ~~~~~~i~~~gH~~~~e~p 289 (349)
+++++.++++||....+..
T Consensus 124 ~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 124 NVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp GEEEEEETTCCSSEEESSC
T ss_pred ceEEEEeCCCCCCCccCCc
Confidence 3789999999998766543
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.60 E-value=2.1e-07 Score=94.71 Aligned_cols=208 Identities=12% Similarity=0.031 Sum_probs=110.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (349)
..++++|+|+.++....+ . .. ...+. .+.|++++.++. +++++...+.++.+. ..
T Consensus 1057 ~~~~L~~l~~~~g~~~~y-~-----~l-a~~L~-~~~v~~l~~~~~----------------~~~~~~~~~~i~~~~~~g 1112 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMY-Q-----NL-SSRLP-SYKLCAFDFIEE----------------EDRLDRYADLIQKLQPEG 1112 (1304)
T ss_dssp SCCEEECCCCTTCBGGGG-H-----HH-HTTCC-SCEEEECBCCCS----------------TTHHHHHHHHHHHHCCSS
T ss_pred cCCcceeecccccchHHH-H-----HH-Hhccc-ccceEeecccCH----------------HHHHHHHHHHHHHhCCCC
Confidence 567899999988776442 1 11 23445 789998887443 223344445555544 35
Q ss_pred cEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccccccc
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVR 196 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (349)
++.++|||+||.+|.++|.+..+ .+..++++++........ ....... ...+.+.. ........
T Consensus 1113 p~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~-~~~~~~~-----------~~~~~l~~-~~~~~~~~ 1179 (1304)
T 2vsq_A 1113 PLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSD-LDGRTVE-----------SDVEALMN-VNRDNEAL 1179 (1304)
T ss_dssp CEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC------CHH-----------HHHHHHHT-TCC-----
T ss_pred CeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcccccccc-cccccch-----------hhHHHHHH-hhhhhhhh
Confidence 89999999999999999987653 488899998764322110 0000000 00000111 11100000
Q ss_pred CCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEE
Q 018916 197 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALV 275 (349)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~ 275 (349)
.. ..........+.. .+...... .. -..+++|++++.|+.|... .....+.+... ...+++
T Consensus 1180 ~~-~~l~~~~l~~~~~------------~~~~~~~~---~~-~~~~~~pv~l~~~~~~~~~~~~~~~W~~~~~-~~~~~~ 1241 (1304)
T 2vsq_A 1180 NS-EAVKHGLKQKTHA------------FYSYYVNL---IS-TGQVKADIDLLTSGADFDIPEWLASWEEATT-GVYRMK 1241 (1304)
T ss_dssp ---CTTTGGGHHHHHH------------HHHHHHC---------CBSSEEEEEECSSCCCCCSSEECSSTTBS-SCCCEE
T ss_pred cc-hhcchHHHHHHHH------------HHHHHHHH---hc-cCCcCCCEEEEEecCccccccchhhHHHHhC-CCeEEE
Confidence 00 0001111111111 11111110 00 1567899999999988633 11112222222 236788
Q ss_pred EEcCCCCcccccCh--hhHHHHHHHHHhhcc
Q 018916 276 EVQACGSMVTEEQP--HAMLIPMEYFLMGYG 304 (349)
Q Consensus 276 ~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~ 304 (349)
.++ ++|+.+++.+ +++++.|.+||++..
T Consensus 1242 ~v~-G~H~~ml~~~~~~~~a~~l~~~L~~~~ 1271 (1304)
T 2vsq_A 1242 RGF-GTHAEMLQGETLDRNAEILLEFLNTQT 1271 (1304)
T ss_dssp ECS-SCTTGGGSHHHHHHHHHHHHHHHHCCC
T ss_pred EeC-CCHHHHCCCHHHHHHHHHHHHHHhccc
Confidence 887 7999888654 489999999998764
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.3e-07 Score=85.85 Aligned_cols=110 Identities=17% Similarity=0.106 Sum_probs=68.5
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~- 115 (349)
.|+||++||.+....+..... .....+..+ ++.|+.+|+| |++.+............+.|....+.-+.+.
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~---~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i 173 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPL---YDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 173 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGG---GCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCEEEEECCCccccCCCCCcc---cCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 589999999763221111111 112344555 5999999999 5654331101112234566665555444333
Q ss_pred --cC--CCcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCC
Q 018916 116 --FG--LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLC 154 (349)
Q Consensus 116 --l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 154 (349)
++ .++|.|+|||+||.++..++... ++.++++|+.++..
T Consensus 174 ~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 174 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 33 35799999999999998877654 46799999999876
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.1e-07 Score=82.85 Aligned_cols=112 Identities=17% Similarity=0.143 Sum_probs=72.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCC-eEEEEECCC----CCCCCCCCCC---CCCCCCCHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPP----GHEFGAAAIS---DDEPVLSVDDLADQIAEV 112 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g-~~vi~~D~~----G~G~s~~~~~---~~~~~~~~~~~~~~l~~~ 112 (349)
..|+||++||.+....+..... + ....+.+++ +.|+.+|+| |++.+..... .......+.|....+.-+
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~-~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv 174 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPW-Y--DGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWV 174 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGG-G--CCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCc-C--CHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHH
Confidence 4589999999873322211111 1 123455555 999999999 8876542111 011234566766666555
Q ss_pred HHH---cC--CCcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCC
Q 018916 113 LNH---FG--LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (349)
Q Consensus 113 l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (349)
.+. ++ .++|.|+|+|.||.+++.++... +..++++|+.++...
T Consensus 175 ~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 175 KENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 444 33 35799999999999999887754 456999999998765
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.6e-06 Score=68.57 Aligned_cols=129 Identities=11% Similarity=0.033 Sum_probs=83.9
Q ss_pred CCeeEEEEEcc----CCCCCeEEEecCCCCChhhhhc------ccccch------hhhhhhcCCeEEEEECC-CCCCCCC
Q 018916 28 SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQ------GLFFCP------EACSLLLHNFCIYHINP-PGHEFGA 90 (349)
Q Consensus 28 ~~~~l~~~~~g----~~~~p~vv~lHG~~~~~~~~~~------~~~~~~------~~~~~l~~g~~vi~~D~-~G~G~s~ 90 (349)
.+..+.|+.+. +..+|+++.++|.++.++.++. ++.+.. .-.....+..+++-+|. .|.|.|-
T Consensus 30 ~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy 109 (255)
T 1whs_A 30 AGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSY 109 (255)
T ss_dssp TTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCE
T ss_pred CCcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCC
Confidence 35578777554 2468999999998777654311 000000 00122245689999996 5999986
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH-------cCCCcEEEEEechhHHHHHHHHHhhh------cccceeEEecCCCCC
Q 018916 91 AAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKYR------HRVLGLILVSPLCKA 156 (349)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~ 156 (349)
..........+.++.++++.++++. +...+++|.|+|+||..+..+|...- -.++++++.++....
T Consensus 110 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 110 TNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp ESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred CcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCH
Confidence 4322111135777888887777743 34468999999999999998887432 347899999887654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.3e-06 Score=80.64 Aligned_cols=108 Identities=19% Similarity=0.113 Sum_probs=70.2
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG----HEFGAAAISDDEPVLSVDDLADQIAEVLNH-- 115 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G----~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~-- 115 (349)
.|+||++||.+....+..... + ....+.++|+.|+.+|+|. +..+.. ........+.|....+.-+.+.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~-~--~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~--~~~~~n~gl~D~~~al~wv~~~i~ 189 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDL-H--GPEYLVSKDVIVITFNYRLNVYGFLSLNS--TSVPGNAGLRDMVTLLKWVQRNAH 189 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTT-C--BCTTGGGGSCEEEEECCCCHHHHHCCCSS--SSCCSCHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEEEcCCccccCCCcccc-c--CHHHHHhCCeEEEEeCCcCCccccccCcc--cCCCCchhHHHHHHHHHHHHHHHH
Confidence 589999999664322211111 1 1235567899999999995 222211 1112345677777666544443
Q ss_pred -cCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCC
Q 018916 116 -FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (349)
Q Consensus 116 -l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 154 (349)
++. ++|.|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 190 ~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 190 FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 343 579999999999999988765 456799999999864
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.28 E-value=1e-05 Score=72.18 Aligned_cols=136 Identities=10% Similarity=0.044 Sum_probs=83.8
Q ss_pred CCceeEEeCC-CeeEEEEEccC----CCCCeEEEecCCCCChhhh--hcc---cccch------hhhhhhcCCeEEEEEC
Q 018916 19 SGKDNLIKTS-HGSLSVTIYGD----QDKPALVTYPDLALNYMSC--FQG---LFFCP------EACSLLLHNFCIYHIN 82 (349)
Q Consensus 19 ~~~~~~i~~~-~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~--~~~---~~~~~------~~~~~l~~g~~vi~~D 82 (349)
....-+++++ +..+.|..+.. ..+|++|++||.++.+..+ +.. +.+.. .-.....+..+++-+|
T Consensus 20 ~~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiD 99 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLE 99 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEEC
T ss_pred eeeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEe
Confidence 3344466765 46788876643 3579999999987775443 110 00000 0011123578999999
Q ss_pred C-CCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHH---cCCCcEEEEEechhHHHHHHHHHh----hhcccceeEEe
Q 018916 83 P-PGHEFGAAAISDDEPVLSVDDLADQ----IAEVLNH---FGLGAVMCMGVTAGAYILTLFAMK----YRHRVLGLILV 150 (349)
Q Consensus 83 ~-~G~G~s~~~~~~~~~~~~~~~~~~~----l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~ 150 (349)
. .|.|.|-... . ....+-+..+++ +..+++. +...+++|+|+|+||..+..+|.. .+-.++++++.
T Consensus 100 qP~GtGfS~~~~-~-~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ig 177 (452)
T 1ivy_A 100 SPAGVGFSYSDD-K-FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVG 177 (452)
T ss_dssp CSTTSTTCEESS-C-CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEE
T ss_pred cCCCCCcCCcCC-C-CCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEec
Confidence 6 7999986321 1 111233444444 4445544 345789999999999966666653 35678999999
Q ss_pred cCCCCC
Q 018916 151 SPLCKA 156 (349)
Q Consensus 151 ~~~~~~ 156 (349)
++....
T Consensus 178 n~~~d~ 183 (452)
T 1ivy_A 178 NGLSSY 183 (452)
T ss_dssp SCCSBH
T ss_pred CCccCh
Confidence 998753
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=0.0002 Score=63.17 Aligned_cols=130 Identities=11% Similarity=0.083 Sum_probs=78.6
Q ss_pred eEEeCC--CeeEEEEEcc----CCCCCeEEEecCCCCChhhh--hc---ccccchhh-----hhhhcCCeEEEEEC-CCC
Q 018916 23 NLIKTS--HGSLSVTIYG----DQDKPALVTYPDLALNYMSC--FQ---GLFFCPEA-----CSLLLHNFCIYHIN-PPG 85 (349)
Q Consensus 23 ~~i~~~--~~~l~~~~~g----~~~~p~vv~lHG~~~~~~~~--~~---~~~~~~~~-----~~~l~~g~~vi~~D-~~G 85 (349)
=+++++ +..+.|..+. +..+|+++.++|.++.++.+ +. ++.+.... .....+..+++-+| ..|
T Consensus 19 GYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvG 98 (421)
T 1cpy_A 19 GYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVN 98 (421)
T ss_dssp EEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTT
T ss_pred EEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCc
Confidence 345543 5677776543 24679999999987765443 11 00000000 01123457899999 569
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----c---CC--CcEEEEEechhHHHHHHHHHhhh------cccceeEEe
Q 018916 86 HEFGAAAISDDEPVLSVDDLADQIAEVLNH----F---GL--GAVMCMGVTAGAYILTLFAMKYR------HRVLGLILV 150 (349)
Q Consensus 86 ~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~----l---~~--~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~ 150 (349)
.|.|-.... ...+.++.++|+.++++. + .. .+++|.|.|+||..+..+|...- -.++++++-
T Consensus 99 tGfSy~~~~---~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IG 175 (421)
T 1cpy_A 99 VGFSYSGSS---GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIG 175 (421)
T ss_dssp STTCEESSC---CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEE
T ss_pred ccccCCCCC---CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEec
Confidence 998864322 123445666666655533 2 33 58999999999999988876432 247888777
Q ss_pred cCCCC
Q 018916 151 SPLCK 155 (349)
Q Consensus 151 ~~~~~ 155 (349)
++...
T Consensus 176 Ng~~d 180 (421)
T 1cpy_A 176 NGLTD 180 (421)
T ss_dssp SCCCC
T ss_pred CcccC
Confidence 76653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.6e-05 Score=68.92 Aligned_cols=39 Identities=8% Similarity=-0.104 Sum_probs=32.8
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
.++|.++|||+||..|+.+++..+ +|+.+|..++.....
T Consensus 218 ~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~ 256 (433)
T 4g4g_A 218 TKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGA 256 (433)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTT
T ss_pred hhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCch
Confidence 368999999999999998888775 799999988765443
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=78.25 Aligned_cols=109 Identities=16% Similarity=0.088 Sum_probs=68.8
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~- 115 (349)
.|+||++||.+.......... + ....+.. .|+.|+.+|+| |++.+. ..+.......+.|....+.-+.+.
T Consensus 112 ~Pviv~iHGGg~~~g~~~~~~-~--~~~~la~~~g~vvv~~nYRlg~~Gf~~~~-~~~~~~~n~gl~D~~~al~wv~~~i 187 (543)
T 2ha2_A 112 TPVLIWIYGGGFYSGAASLDV-Y--DGRFLAQVEGAVLVSMNYRVGTFGFLALP-GSREAPGNVGLLDQRLALQWVQENI 187 (543)
T ss_dssp EEEEEEECCSTTTCCCTTSGG-G--CTHHHHHHHCCEEEEECCCCHHHHHCCCT-TCSSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CeEEEEECCCccccCCCCCCc-C--ChHHHHhcCCEEEEEecccccccccccCC-CCCCCCCcccHHHHHHHHHHHHHHH
Confidence 489999999764332211111 1 1123443 69999999999 343331 001122345567776655544443
Q ss_pred --cCC--CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCC
Q 018916 116 --FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLC 154 (349)
Q Consensus 116 --l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 154 (349)
+|. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 188 ~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 333 5799999999999998777653 46799999999854
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.21 E-value=6.5e-06 Score=75.54 Aligned_cols=111 Identities=15% Similarity=0.063 Sum_probs=70.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
..|+||++||.+....+..... +. ...+.. .|+.|+.+++| |++.+.. .+.......+.|....+.-+.+.
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~-~~--~~~la~~~~~vvv~~nYRlg~~Gf~~~~~-~~~~~~n~gl~D~~~al~wv~~~ 181 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHV-YD--GKFLARVERVIVVSMNYRVGALGFLALPG-NPEAPGNMGLFDQQLALQWVQKN 181 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGG-GC--THHHHHHHCCEEEEECCCCHHHHHCCCTT-CTTSCSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCccc-cC--hHHHhccCCeEEEEecccccccccccCCC-CCCCcCcccHHHHHHHHHHHHHH
Confidence 4589999999764432221111 11 123444 69999999999 4433310 01122335567776665544443
Q ss_pred ---cCC--CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCC
Q 018916 116 ---FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (349)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (349)
+|. ++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 182 i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 182 IAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 344 5799999999999999877654 457999999998653
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.17 E-value=4.2e-06 Score=76.92 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=71.1
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
..|+||++||.+....+..... + ....+. ..|+.|+.+++| |++.+.. .........+.|....+.-+.+.
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~-~--~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~-~~~~~~n~gl~D~~~al~wv~~n 183 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDV-Y--NGKYLAYTEEVVLVSLSYRVGAFGFLALHG-SQEAPGNVGLLDQRMALQWVHDN 183 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG-G--CTHHHHHHHTCEEEECCCCCHHHHHCCCTT-CSSSCSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCCCc-c--ChHHHHhcCCEEEEEeccCccccccccCCC-CCCCcCccccHHHHHHHHHHHHH
Confidence 4589999999765433222211 1 112444 579999999999 4433210 01122335577776666544443
Q ss_pred ---cCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCC
Q 018916 116 ---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (349)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (349)
+|. ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 184 i~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 184 IQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 343 579999999999999887765 3457999999998654
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=6.1e-06 Score=75.94 Aligned_cols=108 Identities=17% Similarity=0.127 Sum_probs=69.7
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
..|+||++||.+....+... |.. ..++. .|+.|+.+|+| |++.+... .....+.+.|....+.-+.+.
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~---~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~--~~~~n~gl~D~~~al~wv~~n 186 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAAST---YDG--LALAAHENVVVVTIQYRLGIWGFFSTGDE--HSRGNWGHLDQVAALRWVQDN 186 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTT---SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSST--TCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCccc---cCH--HHHHhcCCEEEEecCCCCccccCCCCCcc--cCccchhHHHHHHHHHHHHHH
Confidence 35799999997644322111 111 13333 69999999999 55433211 112235566666555544433
Q ss_pred ---cCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCC
Q 018916 116 ---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (349)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (349)
++. ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 187 i~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 187 IASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 343 579999999999999988776 3567999999987654
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.11 E-value=3.6e-06 Score=77.02 Aligned_cols=113 Identities=15% Similarity=0.092 Sum_probs=68.3
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~- 115 (349)
..|+||++||.+....+. ..+....+......|+.|+.+|+| |++.+............+.|....+.-+.+.
T Consensus 101 ~~Pviv~iHGGg~~~g~~--~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni 178 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSN--ANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 178 (522)
T ss_dssp CEEEEEEECCSTTTSCCS--CSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCccccCCc--cccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHH
Confidence 358999999986543221 111111111112569999999999 4443321000111245667766666544443
Q ss_pred --cCC--CcEEEEEechhHHHHHHHHHhh----hcccceeEEecCCCC
Q 018916 116 --FGL--GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCK 155 (349)
Q Consensus 116 --l~~--~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 155 (349)
+|. ++|.|+|+|.||..+...+... +..+.++|+.++...
T Consensus 179 ~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 179 EQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 343 5799999999998777665543 467899999988653
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.00029 Score=60.33 Aligned_cols=37 Identities=5% Similarity=-0.065 Sum_probs=31.7
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
++|.++|||+||..|+.+++..+ +|+.+|..++....
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G 221 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGG 221 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTT
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCc
Confidence 68999999999999998888775 79999988876544
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=3.2e-05 Score=64.85 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=31.3
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
+++.++||||||.+++.++.+ |+.+.+++.+++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 458999999999999999999 9999999998875
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=5.7e-05 Score=68.08 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=64.8
Q ss_pred CCeEEEEECCCCCCCCCCC--CC---CCCCCCCHHHHHHHHHHHHHHc----CC--CcEEEEEechhHHHHHHHHHhhhc
Q 018916 74 HNFCIYHINPPGHEFGAAA--IS---DDEPVLSVDDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRH 142 (349)
Q Consensus 74 ~g~~vi~~D~~G~G~s~~~--~~---~~~~~~~~~~~~~~l~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (349)
.|--++.+++|-+|.|.+- .. .+-...+.++-.+|++.+++.+ +. .+++++|-|+||++|..+-.+||+
T Consensus 72 ~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~ 151 (472)
T 4ebb_A 72 RGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPH 151 (472)
T ss_dssp HTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTT
T ss_pred hCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCC
Confidence 3778999999999999741 11 1234468888888888887654 32 579999999999999999999999
Q ss_pred ccceeEEecCCCC
Q 018916 143 RVLGLILVSPLCK 155 (349)
Q Consensus 143 ~v~~lvl~~~~~~ 155 (349)
.|.+.+..+.+..
T Consensus 152 lv~ga~ASSApv~ 164 (472)
T 4ebb_A 152 LVAGALAASAPVL 164 (472)
T ss_dssp TCSEEEEETCCTT
T ss_pred eEEEEEecccceE
Confidence 9999998887664
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.91 E-value=8.5e-06 Score=74.94 Aligned_cols=113 Identities=19% Similarity=0.113 Sum_probs=67.2
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh--cCCeEEEEECCCCC--CCCCCCC--CCCCCCCCHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPPGH--EFGAAAI--SDDEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l--~~g~~vi~~D~~G~--G~s~~~~--~~~~~~~~~~~~~~~l~~~l~ 114 (349)
..|+||++||.+....+... .-....+...+ ..++.|+.+|+|.- |.-.... ........+.|....+.-+.+
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~-~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ 199 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAA-YPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGG-CCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccc-cCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHH
Confidence 35799999997655433211 10001112212 24799999999952 1111000 001223556777666655544
Q ss_pred H---cCC--CcEEEEEechhHHHHHHHHHhh--------hcccceeEEecCCC
Q 018916 115 H---FGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (349)
Q Consensus 115 ~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 154 (349)
. ++. ++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 200 ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 3 343 5799999999999988776653 45789999999754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=1.8e-06 Score=92.14 Aligned_cols=94 Identities=18% Similarity=0.214 Sum_probs=0.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~ 119 (349)
.+++++++|+.++.... |.. . ...+. ..|+.+..+|. . ...++++++++..+.+..+. ..
T Consensus 2241 ~~~~Lfc~~~agG~~~~-y~~-----l-~~~l~--~~v~~lq~pg~--~--------~~~~i~~la~~~~~~i~~~~p~g 2301 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITV-FHG-----L-AAKLS--IPTYGLQCTGA--A--------PLDSIQSLASYYIECIRQVQPEG 2301 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHH-HHH-----H-HHhhC--CcEEEEecCCC--C--------CCCCHHHHHHHHHHHHHHhCCCC
Confidence 45689999998766533 221 1 22232 78888888872 1 12577888888777776554 36
Q ss_pred cEEEEEechhHHHHHHHHHhhhc---ccc---eeEEecCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRH---RVL---GLILVSPL 153 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~---~v~---~lvl~~~~ 153 (349)
++.++||||||.+|.++|.+... .+. .++++++.
T Consensus 2302 py~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2302 PYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ----------------------------------------
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 89999999999999999976432 344 67777763
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=1.5e-05 Score=73.17 Aligned_cols=113 Identities=13% Similarity=0.008 Sum_probs=66.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhh--hcCCeEEEEECCCCC--CCCCCC--CCCCCCCCCHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSL--LLHNFCIYHINPPGH--EFGAAA--ISDDEPVLSVDDLADQIAEVLN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~--l~~g~~vi~~D~~G~--G~s~~~--~~~~~~~~~~~~~~~~l~~~l~ 114 (349)
..|+||++||.+....+... ......+... ...++.|+.+|+|.- |.-..+ .........+.|....+.-+.+
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~-~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ 191 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTI-FPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVAD 191 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGG-SCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcc-cCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHH
Confidence 34899999998654332211 1000111111 235899999999952 211000 0001223556676666655544
Q ss_pred H---cCC--CcEEEEEechhHHHHHHHHHhh--------hcccceeEEecCCC
Q 018916 115 H---FGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (349)
Q Consensus 115 ~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 154 (349)
. +|. ++|.|+|+|.||..+...+... +..++++|+.++..
T Consensus 192 ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 192 NIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 3 333 5799999999998777665543 56789999999754
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=2.6e-05 Score=72.43 Aligned_cols=112 Identities=17% Similarity=0.052 Sum_probs=67.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCC----CCCCCCCC-----CCCCCCCCCHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAA-----ISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~----G~G~s~~~-----~~~~~~~~~~~~~~~~l~ 110 (349)
..|+||++||.+....+..... +. ...+.. .|+.|+.+++| |++..... .........+.|....+.
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~-~~--~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~ 216 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDI-YN--ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 216 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG-GC--CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCC-CC--chhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHH
Confidence 4589999999764432221111 11 123333 58999999999 44322100 011122355667665555
Q ss_pred HHHHH---cCC--CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCC
Q 018916 111 EVLNH---FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (349)
Q Consensus 111 ~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (349)
-+.+. +|. ++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 217 wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~~ 268 (585)
T 1dx4_A 217 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 268 (585)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccccC
Confidence 44433 343 5799999999999888766642 357899999987653
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=6.9e-05 Score=62.28 Aligned_cols=98 Identities=14% Similarity=0.051 Sum_probs=56.0
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEE-ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH-INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH--- 115 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~-~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~--- 115 (349)
..+..||.+||...- .. .+...++.+.. .|+++.+.-. . .....++.+.+++..+++.
T Consensus 72 ~~~~iVva~RGT~~~-~d------------~l~d~~~~~~~~~~~~~~~~vh----~-Gf~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 1tib_A 72 TNKLIVLSFRGSRSI-EN------------WIGNLNFDLKEINDICSGCRGH----D-GFTSSWRSVADTLRQKVEDAVR 133 (269)
T ss_dssp TTTEEEEEECCCSCT-HH------------HHTCCCCCEEECTTTSTTCEEE----H-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCH-HH------------HHHhcCeeeeecCCCCCCCEec----H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 456688888997421 11 12233555555 4655421100 0 0112344455555555543
Q ss_pred -cCCCcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCC
Q 018916 116 -FGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCK 155 (349)
Q Consensus 116 -l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 155 (349)
....++++.||||||.+|..++..... .+..+++-+|...
T Consensus 134 ~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~vg 177 (269)
T 1tib_A 134 EHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVG 177 (269)
T ss_dssp HCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCCB
T ss_pred HCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCCC
Confidence 344589999999999999999987653 2555555555443
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.72 E-value=6e-05 Score=69.70 Aligned_cols=110 Identities=16% Similarity=0.094 Sum_probs=66.4
Q ss_pred CCCeEEEecCCCCChhhhhcc-----cccchhhhhhh-cCCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQG-----LFFCPEACSLL-LHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~-----~~~~~~~~~~l-~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
..|+||++||.+....+.... ..+. ...+. ..++.|+.+++| |++.+... .....+.+.|....+.
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~--~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~--~~pgn~gl~D~~~Al~ 172 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYD--GEEIATRGNVIVVTFNYRVGPLGFLSTGDS--NLPGNYGLWDQHMAIA 172 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGC--CHHHHHHHTCEEEEECCCCHHHHHCCCSST--TCCCCHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccC--hHHHhcCCCEEEEEeCCccccccCCcCCCC--CCCCccchHHHHHHHH
Confidence 358999999986443221110 0110 12233 347999999999 44333211 1112345777766665
Q ss_pred HHHHH---cCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCC
Q 018916 111 EVLNH---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (349)
Q Consensus 111 ~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 154 (349)
-+.+. +|. ++|.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 173 wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 173 WVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 55443 443 579999999999999877664 345788999888643
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00059 Score=61.49 Aligned_cols=127 Identities=9% Similarity=0.063 Sum_probs=79.5
Q ss_pred CeeEEEEEcc------CCCCCeEEEecCCCCChhhh--hc---ccccch-----hhhhhhcCCeEEEEECC-CCCCCCCC
Q 018916 29 HGSLSVTIYG------DQDKPALVTYPDLALNYMSC--FQ---GLFFCP-----EACSLLLHNFCIYHINP-PGHEFGAA 91 (349)
Q Consensus 29 ~~~l~~~~~g------~~~~p~vv~lHG~~~~~~~~--~~---~~~~~~-----~~~~~l~~g~~vi~~D~-~G~G~s~~ 91 (349)
+..+.|+.+. +..+|.+|+++|.++.++.+ +. ++.+.. .-.....+..+++-+|. .|.|.|-.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~ 127 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCC
Confidence 4567766442 24689999999987776543 11 010000 00112245689999997 69998864
Q ss_pred CCCCC------CCCCCHHHHHHHHHHHHHH-------cCCCcEEEEEechhHHHHHHHHHhh----h--------cccce
Q 018916 92 AISDD------EPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY----R--------HRVLG 146 (349)
Q Consensus 92 ~~~~~------~~~~~~~~~~~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~----p--------~~v~~ 146 (349)
..... ....+.++.++++..+++. +...+++|.|+|+||..+..+|... . -.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkG 207 (483)
T 1ac5_A 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred cCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceee
Confidence 32211 1223677888887777654 2347899999999999998887532 1 23678
Q ss_pred eEEecCCCC
Q 018916 147 LILVSPLCK 155 (349)
Q Consensus 147 lvl~~~~~~ 155 (349)
+++-++...
T Consensus 208 i~IGNg~~d 216 (483)
T 1ac5_A 208 LLIGNGWID 216 (483)
T ss_dssp EEEEEECCC
T ss_pred eEecCCccc
Confidence 887776654
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00013 Score=67.48 Aligned_cols=106 Identities=17% Similarity=0.097 Sum_probs=67.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
..|+||++||.+....+.. . +.. ..+.. .++.|+.+|+| |+..+.. ........+.|....+.-+.+.
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~--~-~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~--~~~~~n~gl~D~~~al~wv~~n 202 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGN--L-YDG--SVLASYGNVIVITVNYRLGVLGFLSTGD--QAAKGNYGLLDLIQALRWTSEN 202 (574)
T ss_dssp CEEEEEECCCSSSSSCCGG--G-SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS--SSCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCC--c-cCc--hhhhccCCEEEEEeCCcCcccccCcCCC--CCCCCcccHHHHHHHHHHHHHH
Confidence 3589999999765433321 1 111 23333 37999999999 3322221 1112245677777666555543
Q ss_pred ---cCC--CcEEEEEechhHHHHHHHHHhhh---cccceeEEecCC
Q 018916 116 ---FGL--GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPL 153 (349)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 153 (349)
+|. ++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 203 i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 203 IGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred HHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 443 57999999999999998876544 457888888754
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00044 Score=57.72 Aligned_cols=40 Identities=25% Similarity=0.230 Sum_probs=27.7
Q ss_pred HHHHHHHHHHH----HHcCCCcEEEEEechhHHHHHHHHHhhhc
Q 018916 103 DDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (349)
Q Consensus 103 ~~~~~~l~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (349)
+.+.+++.+.+ +.....++++.||||||.+|..++.....
T Consensus 117 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~ 160 (279)
T 1tia_A 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRG 160 (279)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHh
Confidence 34444444444 33344689999999999999998887543
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00072 Score=56.13 Aligned_cols=63 Identities=11% Similarity=0.068 Sum_probs=38.1
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHhh
Q 018916 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 75 g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
++.+...++||..... -.......+..+.+++...++.+ ...++++.||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~---vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTK---VHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCE---EcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 5667777788741111 01111123455555555544332 234599999999999999988766
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0035 Score=51.49 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=72.7
Q ss_pred CeeEEEEEccC-----CCCCeEEEecCCCCChhhhhc------ccccchh------hhhhhcCCeEEEEECC-CCCCCCC
Q 018916 29 HGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQ------GLFFCPE------ACSLLLHNFCIYHINP-PGHEFGA 90 (349)
Q Consensus 29 ~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~------~~~~~~~------~~~~l~~g~~vi~~D~-~G~G~s~ 90 (349)
+..+.|..+.. ..+|+++.++|.++.++.++. ++.+... -.....+..+++-+|. .|.|.|-
T Consensus 36 ~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy 115 (270)
T 1gxs_A 36 GRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSY 115 (270)
T ss_dssp TEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCE
T ss_pred CcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccC
Confidence 46787765543 357899999998776654310 0000000 0011234679999995 6999886
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH-------cCCCcEEEEEechhHHHHHHHHHhh--------hcccceeEEecCCCC
Q 018916 91 AAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLCK 155 (349)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~ 155 (349)
....... ..+-++.++++.++++. +...+++|.|.| |-++.. +|... .-.++++++.++...
T Consensus 116 ~~~~~~~-~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~-la~~i~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 116 SNTSSDL-SMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQ-LSQVVYRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp ESSGGGG-CCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHH-HHHHHHHTTTTCTTCEEEEEEEESCCCB
T ss_pred CCCCccc-cCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHH-HHHHHHhccccccceeeeeEEEeCCccC
Confidence 4321111 23445566666655532 344689999999 655444 44321 124789999888765
Q ss_pred C
Q 018916 156 A 156 (349)
Q Consensus 156 ~ 156 (349)
.
T Consensus 193 ~ 193 (270)
T 1gxs_A 193 D 193 (270)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00079 Score=50.53 Aligned_cols=62 Identities=23% Similarity=0.372 Sum_probs=51.4
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhcc----------------------cceeEEEEcCCCCcccccChhhHHHHHHH
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKIDR----------------------RYSALVEVQACGSMVTEEQPHAMLIPMEY 298 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~~----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 298 (349)
.+++||.+|+.|.++ ...+.+.+.+.- .+.++..+.++||++..++|++..+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 689999999999998 455566666641 13788899999999999999999999999
Q ss_pred HHhhcc
Q 018916 299 FLMGYG 304 (349)
Q Consensus 299 fl~~~~ 304 (349)
||....
T Consensus 144 fl~~~~ 149 (153)
T 1whs_B 144 FLQGKP 149 (153)
T ss_dssp HHHTCC
T ss_pred HHCCCC
Confidence 998753
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.023 Score=47.35 Aligned_cols=133 Identities=11% Similarity=0.072 Sum_probs=83.3
Q ss_pred ceeEEeC-CCeeEEEEEcc----CCCCCeEEEecCCCCChhhh--hcc---cccchh------hhhhhcCCeEEEEECCC
Q 018916 21 KDNLIKT-SHGSLSVTIYG----DQDKPALVTYPDLALNYMSC--FQG---LFFCPE------ACSLLLHNFCIYHINPP 84 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g----~~~~p~vv~lHG~~~~~~~~--~~~---~~~~~~------~~~~l~~g~~vi~~D~~ 84 (349)
..=++++ ++..+.|+... +..+|.||.+-|.++.++.+ +.. +.+... -.....+-.+++-+|.|
T Consensus 24 ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~P 103 (300)
T 4az3_A 24 YSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 103 (300)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCS
T ss_pred eeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCC
Confidence 3345665 45678887664 24678999999887665433 111 000000 00111245789999976
Q ss_pred -CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------cCCCcEEEEEechhHHHHHHHHHhhhc----ccceeEEecC
Q 018916 85 -GHEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSP 152 (349)
Q Consensus 85 -G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~ 152 (349)
|.|.|-.... ....+..+.++++..+++. +...+++|.|-|+||..+-.+|...-+ .++++++-++
T Consensus 104 vGtGfSy~~~~--~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg 181 (300)
T 4az3_A 104 AGVGFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 181 (300)
T ss_dssp TTSTTCEETTC--CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CcccccccCCC--cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCC
Confidence 8888864321 2235667777777766642 344789999999999999988874322 4788888877
Q ss_pred CCC
Q 018916 153 LCK 155 (349)
Q Consensus 153 ~~~ 155 (349)
...
T Consensus 182 ~~d 184 (300)
T 4az3_A 182 LSS 184 (300)
T ss_dssp CSB
T ss_pred ccC
Confidence 654
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0019 Score=53.59 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=23.8
Q ss_pred HHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
..+++.....++++.||||||.+|..++...
T Consensus 128 ~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 128 QEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 3333444456899999999999999988766
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0032 Score=51.86 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=24.6
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
+..+++.....++++.|||+||.+|..++....
T Consensus 115 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 147 (261)
T 1uwc_A 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQLS 147 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCceEEEEecCHHHHHHHHHHHHHh
Confidence 344444444568999999999999998887643
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0055 Score=46.02 Aligned_cols=63 Identities=16% Similarity=0.290 Sum_probs=48.8
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhccc---------------------------ceeEEEEcCCCCcccccChhhH
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDRR---------------------------YSALVEVQACGSMVTEEQPHAM 292 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~---------------------------~~~~~~i~~~gH~~~~e~p~~~ 292 (349)
-.+++|+..|..|.++ .-.+.+.+.+.-. +.++..+.++||++..++|++.
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~a 141 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 141 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHH
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHH
Confidence 3689999999999998 3444444544310 1357788899999999999999
Q ss_pred HHHHHHHHhhcc
Q 018916 293 LIPMEYFLMGYG 304 (349)
Q Consensus 293 ~~~i~~fl~~~~ 304 (349)
.+.+..||.+.-
T Consensus 142 l~m~~~fl~g~p 153 (155)
T 4az3_B 142 FTMFSRFLNKQP 153 (155)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999998753
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.014 Score=47.40 Aligned_cols=106 Identities=18% Similarity=0.152 Sum_probs=59.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEE-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI-NPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~-D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l----~~ 115 (349)
++|+|++.||.+....... .+ ...+...+...+.+=.+ ++|-... + ...+..+=++++...+ ..
T Consensus 2 ~~p~ii~ARGT~e~~~~Gp-G~--~~~la~~l~~~~~~q~Vg~YpA~~~-----~---y~~S~~~G~~~~~~~i~~~~~~ 70 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGP-GL--PADTARDVLDIYRWQPIGNYPAAAF-----P---MWPSVEKGVAELILQIELKLDA 70 (254)
T ss_dssp CCCEEEEECCTTCCCTTSS-SH--HHHHHTTSTTTSEEEECCSCCCCSS-----S---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCC-Cc--HHHHHHHHHHhcCCCccccccCccc-----C---ccchHHHHHHHHHHHHHHHHhh
Confidence 5799999999866421100 00 01123444444544444 2444311 0 0013333333444433 33
Q ss_pred cCCCcEEEEEechhHHHHHHHHHh-----------hhcccceeEEecCCCCCC
Q 018916 116 FGLGAVMCMGVTAGAYILTLFAMK-----------YRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lvl~~~~~~~~ 157 (349)
--..+++|.|+|.|+.++-.++.. ..++|.++++++-+....
T Consensus 71 CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r~~ 123 (254)
T 3hc7_A 71 DPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQK 123 (254)
T ss_dssp CTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTCCT
T ss_pred CCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCCCC
Confidence 344789999999999999987755 245789999988655443
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0067 Score=49.75 Aligned_cols=34 Identities=6% Similarity=0.208 Sum_probs=25.4
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+.+..+++.....++++.|||+||.+|..++...
T Consensus 112 ~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 145 (258)
T 3g7n_A 112 TEVKALIAKYPDYTLEAVGHSLGGALTSIAHVAL 145 (258)
T ss_dssp HHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHHH
Confidence 3444455555557899999999999999877653
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.011 Score=49.02 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=25.6
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 107 ~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+.+..+++.....++++.|||+||.+|..+|...
T Consensus 126 ~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l 159 (279)
T 3uue_A 126 TAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDI 159 (279)
T ss_dssp HHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHH
Confidence 3444455555567899999999999999887654
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.0089 Score=50.53 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+..+++.....++++.|||+||.+|..++...
T Consensus 126 l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 126 VAKARKANPSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp HHHHHHSSTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCceEEeecCHHHHHHHHHHHHH
Confidence 33333444456899999999999999877754
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.011 Score=49.73 Aligned_cols=37 Identities=14% Similarity=0.328 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh
Q 018916 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (349)
Q Consensus 105 ~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (349)
+.+.+..+++.....++++.|||+||.+|..+|....
T Consensus 140 i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 176 (301)
T 3o0d_A 140 IGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLK 176 (301)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHHH
Confidence 3344555555555578999999999999998887543
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.40 E-value=0.053 Score=40.71 Aligned_cols=62 Identities=19% Similarity=0.353 Sum_probs=48.3
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhc----------------c---------cceeEEEEcCCCCcccccChhhHHHH
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKID----------------R---------RYSALVEVQACGSMVTEEQPHAMLIP 295 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~----------------~---------~~~~~~~i~~~gH~~~~e~p~~~~~~ 295 (349)
.+++||..|+.|.++ ...+.+.+.+. + .+.++..+.++||++..++|++..+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 689999999999998 34444444442 1 01467788999999999999999999
Q ss_pred HHHHHhhcc
Q 018916 296 MEYFLMGYG 304 (349)
Q Consensus 296 i~~fl~~~~ 304 (349)
+..||....
T Consensus 146 ~~~fl~g~~ 154 (158)
T 1gxs_B 146 FKQFLKGEP 154 (158)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHcCCC
Confidence 999998753
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.08 E-value=0.069 Score=41.45 Aligned_cols=81 Identities=9% Similarity=0.060 Sum_probs=53.0
Q ss_pred CCeEEEEE--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh----ccccee
Q 018916 74 HNFCIYHI--NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGL 147 (349)
Q Consensus 74 ~g~~vi~~--D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~l 147 (349)
+...|+.+ ++|-.-.... ...........++...+......-...+++|+|+|.|+.++-..+...| ++|.++
T Consensus 51 ~~v~v~~V~~~YpA~~~~~~-~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 129 (197)
T 3qpa_A 51 DGVWIQGVGGAYRATLGDNA-LPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGT 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGG-STTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEE
T ss_pred CceEEEeeCCCCcCCCCccc-CccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEE
Confidence 46778888 7887521100 0001111234556666666666666689999999999999988776544 678999
Q ss_pred EEecCCCC
Q 018916 148 ILVSPLCK 155 (349)
Q Consensus 148 vl~~~~~~ 155 (349)
++++-+..
T Consensus 130 vlfGdP~~ 137 (197)
T 3qpa_A 130 VLFGYTKN 137 (197)
T ss_dssp EEESCTTT
T ss_pred EEeeCCcc
Confidence 99886544
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.38 E-value=0.1 Score=40.59 Aligned_cols=81 Identities=7% Similarity=0.089 Sum_probs=52.3
Q ss_pred CCeEEEEE--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh----ccccee
Q 018916 74 HNFCIYHI--NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGL 147 (349)
Q Consensus 74 ~g~~vi~~--D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~l 147 (349)
+...|+.+ ++|-.-.... ...........++...+......-...+++|.|+|.|+.++-..+...| ++|.++
T Consensus 59 ~~v~v~~V~~~YpA~~~~~~-~~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 137 (201)
T 3dcn_A 59 NDVWVQGVGGPYLADLASNF-LPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGV 137 (201)
T ss_dssp GGEEEEECCTTCCCCSGGGG-STTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEE
T ss_pred CceEEEEeCCCccccCCccc-ccCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEE
Confidence 45778888 6876421100 0001111245566666666666666689999999999999988776544 578899
Q ss_pred EEecCCCC
Q 018916 148 ILVSPLCK 155 (349)
Q Consensus 148 vl~~~~~~ 155 (349)
++++-+..
T Consensus 138 vlfGdP~~ 145 (201)
T 3dcn_A 138 VLFGYTKN 145 (201)
T ss_dssp EEETCTTT
T ss_pred EEeeCccc
Confidence 98886544
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=94.00 E-value=0.18 Score=39.70 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=46.2
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHH----HHcCCCcEEEEEechhHHHHHHHHHh---------
Q 018916 75 NFCIYHINPPGHEFGAAAISDDEPVL--SVDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMK--------- 139 (349)
Q Consensus 75 g~~vi~~D~~G~G~s~~~~~~~~~~~--~~~~~~~~l~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~--------- 139 (349)
+-.+..+++|-...... .....| +..+=++++...+ +.--..+++|.|+|.|+.++-..+..
T Consensus 35 g~~~~~V~YpA~~~~~~---~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~ 111 (207)
T 1g66_A 35 GSTAEAINYPACGGQSS---CGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYT 111 (207)
T ss_dssp TCEEEECCCCCCSSCGG---GTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBC
T ss_pred CCceEEeeccccccccc---cCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccc
Confidence 44788889887521100 000112 2223333333333 44445789999999999999877641
Q ss_pred -----hh----cccceeEEecCCCCC
Q 018916 140 -----YR----HRVLGLILVSPLCKA 156 (349)
Q Consensus 140 -----~p----~~v~~lvl~~~~~~~ 156 (349)
.| ++|.++++++-+...
T Consensus 112 ~~~~~l~~~~~~~V~avvlfGdP~~~ 137 (207)
T 1g66_A 112 NTAVQLSSSAVNMVKAAIFMGDPMFR 137 (207)
T ss_dssp CCSCCSCHHHHHHEEEEEEESCTTCB
T ss_pred cCCCCCChhhhccEEEEEEEcCCCcc
Confidence 12 568888888765543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=93.77 E-value=0.085 Score=47.48 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=50.1
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhc------------------------------c-----cceeEEEEcCCCCccc
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKID------------------------------R-----RYSALVEVQACGSMVT 285 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~------------------------------~-----~~~~~~~i~~~gH~~~ 285 (349)
.++|||.+|+.|.++ .-.+.+.+.+. + .+.++..+.++||++.
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 689999999999998 34444444432 0 1246778899999999
Q ss_pred ccChhhHHHHHHHHHhhcccc
Q 018916 286 EEQPHAMLIPMEYFLMGYGLY 306 (349)
Q Consensus 286 ~e~p~~~~~~i~~fl~~~~~~ 306 (349)
.++|++..+.|..||.+..+.
T Consensus 452 ~dqP~~al~m~~~fl~~~~l~ 472 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDVMII 472 (483)
T ss_dssp HHCHHHHHHHHHHHTTCCEEE
T ss_pred chhHHHHHHHHHHHHCCcccc
Confidence 999999999999999987654
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=93.59 E-value=0.24 Score=38.99 Aligned_cols=79 Identities=16% Similarity=0.036 Sum_probs=46.3
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCCCC--C----HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh---------
Q 018916 75 NFCIYHINPPGHEFGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK--------- 139 (349)
Q Consensus 75 g~~vi~~D~~G~G~s~~~~~~~~~~~--~----~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~--------- 139 (349)
+-++..+++|-...... .....| + ..++.+.+....+.--..+++|.|+|.|+.++-..+..
T Consensus 35 g~~~~~V~YpA~~~~~~---~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~ 111 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQAS---CGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGIT 111 (207)
T ss_dssp TEEEEECCSCCCSSCGG---GTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBC
T ss_pred CCceEEeeccccccccc---cCCccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCccccccc
Confidence 45788889888521110 001112 2 22333333333344445789999999999999877641
Q ss_pred -----hh----cccceeEEecCCCCC
Q 018916 140 -----YR----HRVLGLILVSPLCKA 156 (349)
Q Consensus 140 -----~p----~~v~~lvl~~~~~~~ 156 (349)
.| ++|.++++++-+...
T Consensus 112 ~~~~~l~~~~~~~V~avvlfGdP~~~ 137 (207)
T 1qoz_A 112 NTAVPLTAGAVSAVKAAIFMGDPRNI 137 (207)
T ss_dssp CCSCCSCHHHHHHEEEEEEESCTTCB
T ss_pred CCCCCCChHHhccEEEEEEEcCCccc
Confidence 11 468888888765443
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=93.50 E-value=0.31 Score=38.19 Aligned_cols=74 Identities=15% Similarity=0.103 Sum_probs=45.6
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh--h----ccccee
Q 018916 75 NFCIYHINPPGHEFGAAAISDDEP-VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--R----HRVLGL 147 (349)
Q Consensus 75 g~~vi~~D~~G~G~s~~~~~~~~~-~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p----~~v~~l 147 (349)
|-..+.+++|-.- . .. .....++...|....+.-...+++|+|+|.|+.++-..+... + ++|.++
T Consensus 40 g~~~~~V~YpA~~--~------y~S~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~av 111 (205)
T 2czq_A 40 GGTIYNTVYTADF--S------QNSAAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGV 111 (205)
T ss_dssp SEEEEECCSCCCT--T------CCCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEE
T ss_pred CCCceeecccccC--C------CcCHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEE
Confidence 3345777777641 1 11 122333333334433444457899999999999998877554 3 579999
Q ss_pred EEecCCCCC
Q 018916 148 ILVSPLCKA 156 (349)
Q Consensus 148 vl~~~~~~~ 156 (349)
+|++-+...
T Consensus 112 vlfGdP~~~ 120 (205)
T 2czq_A 112 FLIGNPDHK 120 (205)
T ss_dssp EEESCTTCC
T ss_pred EEEeCCCcC
Confidence 999855443
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=93.36 E-value=0.21 Score=38.35 Aligned_cols=85 Identities=6% Similarity=0.082 Sum_probs=52.2
Q ss_pred hhhcCCeEEEEEC--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhh----cc
Q 018916 70 SLLLHNFCIYHIN--PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HR 143 (349)
Q Consensus 70 ~~l~~g~~vi~~D--~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~ 143 (349)
..+.....|+.++ +|-.-.... ..........++....+....+.-...+++|+|+|.|+.++-..+...| ++
T Consensus 43 ~~~~~~v~v~~V~~~YpA~~~~~~-~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~ 121 (187)
T 3qpd_A 43 LARSGDVACQGVGPRYTADLPSNA-LPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDK 121 (187)
T ss_dssp HHSTTCEEEEECCSSCCCCGGGGG-STTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHH
T ss_pred HHcCCCceEEeeCCcccCcCcccc-ccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhh
Confidence 3334567899998 876421000 0000111123444444455555555688999999999999998776544 57
Q ss_pred cceeEEecCCCC
Q 018916 144 VLGLILVSPLCK 155 (349)
Q Consensus 144 v~~lvl~~~~~~ 155 (349)
|.++++++-+..
T Consensus 122 V~avvlfGdP~~ 133 (187)
T 3qpd_A 122 IKGVVLFGYTRN 133 (187)
T ss_dssp EEEEEEESCTTT
T ss_pred EEEEEEeeCCcc
Confidence 889998886543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=93.01 E-value=0.1 Score=44.74 Aligned_cols=23 Identities=13% Similarity=0.216 Sum_probs=19.6
Q ss_pred CCcEEEEEechhHHHHHHHHHhh
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
..++++.|||+||.+|..+|...
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~l 187 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALWL 187 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHHH
Confidence 36799999999999999887753
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=92.32 E-value=0.4 Score=39.98 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=48.5
Q ss_pred CCeEEEEECCCCCCCCCCCCC-CCCCCC--CHH----HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh-------
Q 018916 74 HNFCIYHINPPGHEFGAAAIS-DDEPVL--SVD----DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK------- 139 (349)
Q Consensus 74 ~g~~vi~~D~~G~G~s~~~~~-~~~~~~--~~~----~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~------- 139 (349)
....++.++++-.-... .. .....| +.. ++.+.|....+.--..+++|+|+|.|+.|+-.++..
T Consensus 83 ~~v~v~~V~YPA~~~~~--~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~ 160 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNP--FAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGP 160 (302)
T ss_dssp TTEEEEECCCCCCCCCT--TTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSS
T ss_pred CcceEEecccccccccc--ccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCC
Confidence 46778889988762110 00 000111 222 333333333333335789999999999999987753
Q ss_pred -hhcccceeEEecCCCCC
Q 018916 140 -YRHRVLGLILVSPLCKA 156 (349)
Q Consensus 140 -~p~~v~~lvl~~~~~~~ 156 (349)
.+++|.+++|++-+...
T Consensus 161 ~~~~~V~aVvLfGdP~r~ 178 (302)
T 3aja_A 161 VDEDLVLGVTLIADGRRQ 178 (302)
T ss_dssp SCGGGEEEEEEESCTTCB
T ss_pred CChHHEEEEEEEeCCCCc
Confidence 24679999998866544
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.32 E-value=0.48 Score=42.18 Aligned_cols=61 Identities=16% Similarity=0.288 Sum_probs=48.0
Q ss_pred CCceEEEEeCCCccc--hhHHHHHHHhc--------------c-------------cceeEEEEcCCCCcccccChhhHH
Q 018916 243 QCRSLIFVGESSPFH--SEAVHMTSKID--------------R-------------RYSALVEVQACGSMVTEEQPHAML 293 (349)
Q Consensus 243 ~~Pvlii~g~~D~~~--~~~~~~~~~~~--------------~-------------~~~~~~~i~~~gH~~~~e~p~~~~ 293 (349)
.++|||..|+.|.++ .-.+.+.+.+. + .+.++..+.++||++..++|++..
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 689999999999998 34445555542 0 014567888999999999999999
Q ss_pred HHHHHHHhhc
Q 018916 294 IPMEYFLMGY 303 (349)
Q Consensus 294 ~~i~~fl~~~ 303 (349)
+.+..||...
T Consensus 441 ~m~~~fl~g~ 450 (452)
T 1ivy_A 441 TMFSRFLNKQ 450 (452)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9999999763
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=90.54 E-value=0.039 Score=48.17 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhh
Q 018916 105 LADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 105 ~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 212 Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 212 VLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 33444455544432 4689999999999999877643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 349 | ||||
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 5e-04 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 0.001 |
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 8/143 (5%)
Query: 38 GDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94
G + + L + + P A + E
Sbjct: 19 GKESRECLFLLHGSGVDETTLVPLAR--RIAPTATLVAARGRIPQEDGFRWFERIDPTRF 76
Query: 95 DDEPVL-SVDDLADQIAEVLNHFGLGA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVS 151
+ + +L A E GL +G + GA +++ + + V L+
Sbjct: 77 EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLR 136
Query: 152 PLCKAPSWTEWLYNKVMSNLLYY 174
P+ + + ++
Sbjct: 137 PMPVLDHVPATDLAGIRTLIIAG 159
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 38.0 bits (86), Expect = 0.001
Identities = 21/198 (10%), Positives = 55/198 (27%), Gaps = 10/198 (5%)
Query: 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172
+ L + + G ++ M R LI+++ T+ ++ ++
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPA 169
Query: 173 YYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR 232
+ + R + E++ D + V F + + R
Sbjct: 170 DGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQR 229
Query: 233 PD---------ISEGLRKLQCRSLIFVGESSP-FHSEAVHMTSKIDRRYSALVEVQACGS 282
IS ++ + +G + ++ + +E+ G
Sbjct: 230 DQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGH 289
Query: 283 MVTEEQPHAMLIPMEYFL 300
V E +++F
Sbjct: 290 FVQEFGEQVAREALKHFA 307
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.96 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.96 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.91 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.9 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.9 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.9 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.89 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.88 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.88 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.87 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.87 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.86 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.86 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.86 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.85 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.81 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.8 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.79 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.76 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.76 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.74 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.73 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.73 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.72 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.7 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.7 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.69 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.69 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.68 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.64 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.59 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.56 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.55 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.53 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.53 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.41 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.4 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.4 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.36 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.36 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.34 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.23 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.17 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.11 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.03 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.0 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.95 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.94 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.91 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.9 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.82 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.82 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.67 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.62 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.55 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.41 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.36 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.13 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.12 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.1 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.27 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.26 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 96.99 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 96.95 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.84 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.84 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 96.78 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.62 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.59 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.37 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.3 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.25 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.08 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.05 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 95.7 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 93.35 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 91.47 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 91.13 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=4e-37 Score=261.96 Aligned_cols=272 Identities=14% Similarity=0.139 Sum_probs=179.8
Q ss_pred eeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccch-hhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCP-EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~-~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
++.+.+++.+++|...|++++|+|||+||++.++.. |.. .+..++++||+|+++|+||||.|+.... ....+
T Consensus 2 e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~ 74 (297)
T d1q0ra_ 2 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALG------WPDEFARRLADGGLHVIRYDHRDTGRSTTRDF-AAHPY 74 (297)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGG------SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCT-TTSCC
T ss_pred CeEEEECCEEEEEEEecCCCCCEEEEECCCCcChhH------HHHHHHHHHHhCCCEEEEEeCCCCcccccccc-ccccc
Confidence 678899999999999999999999999999988755 433 3456678899999999999999975322 23458
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH-HHh-cCcc
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL-LYY-YGMC 178 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 178 (349)
+++++++|+..++++++.++++++||||||.+++.+|.++|++|+++|++++................... ... ....
T Consensus 75 ~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (297)
T d1q0ra_ 75 GFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQ 154 (297)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCC
T ss_pred ccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999987765543322211100000 000 0000
Q ss_pred hhHHHHHHHhhcccc--------------cccCCCCCCchHHHHHHH-Hhhhhc--cchhHHHHHHHhcCCCChhhhccc
Q 018916 179 GVVKELLLKRYFSKQ--------------EVRGNAQVPESDIVQACR-RLLDER--QSSNVWHFLEAINGRPDISEGLRK 241 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 241 (349)
....+.+........ .................. ...... ................+....+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (297)
T d1q0ra_ 155 QPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELRE 234 (297)
T ss_dssp HHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGG
T ss_pred HHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhhc
Confidence 000000000000000 000000000111111000 000000 000000000000011234456789
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
|++|+++|+|++|.++ ...+.+.+.+++ +++++++++||+++.|+|+++++.|.+||+.
T Consensus 235 i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 235 VTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp CCSCEEEEEETTCSSSCTTHHHHHHHTSTT--EEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred cCCceEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 9999999999999998 567788888987 9999999999999999999999999999985
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.2e-36 Score=253.40 Aligned_cols=258 Identities=14% Similarity=0.109 Sum_probs=177.7
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.+++++++|.+++|...| ++|+|||+||++++...+.. |... ...++++|+|+++|+||||.|+.+ ...+
T Consensus 3 ~~~~~~~dg~~l~y~~~G--~g~~vvllHG~~~~~~~~~~---~~~~-~~~l~~~~~v~~~D~~G~G~S~~~----~~~~ 72 (268)
T d1j1ia_ 3 VERFVNAGGVETRYLEAG--KGQPVILIHGGGAGAESEGN---WRNV-IPILARHYRVIAMDMLGFGKTAKP----DIEY 72 (268)
T ss_dssp EEEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHH---HTTT-HHHHTTTSEEEEECCTTSTTSCCC----SSCC
T ss_pred cCeEEEECCEEEEEEEEc--CCCeEEEECCCCCCccHHHH---HHHH-HHHHhcCCEEEEEcccccccccCC----cccc
Confidence 467889999999999999 57899999999876543211 3222 466688999999999999998743 2357
Q ss_pred CHHHHHHHHHHHHHHcCCC-cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
+++++++++.+++++++.+ +++++||||||.+++.+|.++|++|+++|++++............ . +.......
T Consensus 73 ~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-~-----~~~~~~~~ 146 (268)
T d1j1ia_ 73 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLR-P-----IINYDFTR 146 (268)
T ss_dssp CHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------------CCSCH
T ss_pred ccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhh-h-----hhhhhhhh
Confidence 8999999999999999874 689999999999999999999999999999998765443222110 0 00111111
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHH-HHHHHhhhhccchhHH---HHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIV-QACRRLLDERQSSNVW---HFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.........+... ... ...... ..+............. .............+.+.++++|+++|+|++|.
T Consensus 147 ~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~ 220 (268)
T d1j1ia_ 147 EGMVHLVKALTND-GFK-----IDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDK 220 (268)
T ss_dssp HHHHHHHHHHSCT-TCC-----CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCS
T ss_pred hhhHHHHHHHhhh-hhh-----hhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCC
Confidence 1111122222221 111 122222 2222222111111111 11222223234456688999999999999999
Q ss_pred cc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 256 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 256 ~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++ +..+.+.+.+++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 221 ~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 221 VVPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp SSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 98 566778888887 9999999999999999999999999999975
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=1.2e-36 Score=257.04 Aligned_cols=270 Identities=14% Similarity=0.128 Sum_probs=178.4
Q ss_pred CCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC-CC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DE 97 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~-~~ 97 (349)
...++.+++++.+++|...|++++|+|||+||++.+...+. .|.+. ...++++|+|+++|+||||.|+..... ..
T Consensus 3 ~~~~~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~---~~~~~-~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~ 78 (281)
T d1c4xa_ 3 EIIEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAAS---NWRPI-IPDLAENFFVVAPDLIGFGQSEYPETYPGH 78 (281)
T ss_dssp CCEEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHH---HHGGG-HHHHHTTSEEEEECCTTSTTSCCCSSCCSS
T ss_pred EEEEEEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcHHH---HHHHH-HHHHhCCCEEEEEeCCCCcccccccccccc
Confidence 34667888888999999999999999999999987654321 14333 455677999999999999999753221 11
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc
Q 018916 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (349)
Q Consensus 98 ~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (349)
...+++++++++.+++++++.++++++||||||.+|+.+|.++|++|++++++++............ ........ ...
T Consensus 79 ~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~-~~~~~~~~-~~~ 156 (281)
T d1c4xa_ 79 IMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPEL-ARLLAFYA-DPR 156 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHH-HHHHTGGG-SCC
T ss_pred chhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHH-HHHHHhhh-hcc
Confidence 2245778899999999999999999999999999999999999999999999998754322111110 00111110 011
Q ss_pred chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhH-HHHHHHhcC----CCChhhhccccCCceEEEEeC
Q 018916 178 CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNV-WHFLEAING----RPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~l~~i~~Pvlii~g~ 252 (349)
..... .....+....... ...................... ......+.. .......+.++++|+|+|+|+
T Consensus 157 ~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 231 (281)
T d1c4xa_ 157 LTPYR-ELIHSFVYDPENF----PGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGR 231 (281)
T ss_dssp HHHHH-HHHHTTSSCSTTC----TTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEET
T ss_pred cchhh-hhhhhhccccccc----chhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeC
Confidence 11111 1222221110110 0011222222111111111111 111112211 123335578899999999999
Q ss_pred CCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 253 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
+|.++ +..+.+.+.+++ +++++++++||++++|+|+++++.|.+||+
T Consensus 232 ~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 232 QDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFR 280 (281)
T ss_dssp TCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHhC
Confidence 99998 567778888887 999999999999999999999999999996
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=9.7e-37 Score=258.58 Aligned_cols=262 Identities=13% Similarity=0.133 Sum_probs=182.5
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+.++++++|.+++|...|++++|+|||+||++.++.. |... ...+.++|+|+++|+||||.|+.+ ...+
T Consensus 8 ~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~d~~G~G~S~~~----~~~~ 76 (291)
T d1bn7a_ 8 DPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYL------WRNI-IPHVAPSHRCIAPDLIGMGKSDKP----DLDY 76 (291)
T ss_dssp CCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGGG------GTTT-HHHHTTTSCEEEECCTTSTTSCCC----SCCC
T ss_pred CCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEEeCCCCcccccc----cccc
Confidence 5689999999999999999899999999999988755 4333 356678999999999999999743 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh-hhHHHH------
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV-MSNLLY------ 173 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~------ 173 (349)
+++++++++.+++++++.++++++||||||.+++.+|.++|+++++++++++.........+..... ....+.
T Consensus 77 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
T d1bn7a_ 77 FFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGR 156 (291)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHH
T ss_pred chhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHH
Confidence 9999999999999999999999999999999999999999999999999987765443222111000 000000
Q ss_pred -hcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCCC----------Chhhhccc
Q 018916 174 -YYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRP----------DISEGLRK 241 (349)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~l~~ 241 (349)
................... .......+.+....... ................ +....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T d1bn7a_ 157 ELIIDQNAFIEGVLPKCVVR--------PLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQ 228 (291)
T ss_dssp HHHTTSCHHHHTHHHHTCSS--------CCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhhhHHhhhhhhccc--------cchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhc
Confidence 0000000000111111111 11333333333333221 1112222222221111 12234678
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++|+++++|++|.++ ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||+++
T Consensus 229 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 229 SPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred CCCCEEEEEeCCCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 8999999999999998 566778888887 99999999999999999999999999999876
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=9.1e-37 Score=258.08 Aligned_cols=266 Identities=14% Similarity=0.162 Sum_probs=177.6
Q ss_pred ceeEEeCCCeeEEEEEccCC-CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
.+.+++++|.+++|...|++ ++|+|||+||+++++..| ...+..++++||+|+++|+||||.|+.+ ....
T Consensus 3 ~~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~------~~~~~~~~~~~~~vi~~D~~G~G~S~~~---~~~~ 73 (290)
T d1mtza_ 3 IENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDY------LLSLRDMTKEGITVLFYDQFGCGRSEEP---DQSK 73 (290)
T ss_dssp EEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGG------GGGGGGGGGGTEEEEEECCTTSTTSCCC---CGGG
T ss_pred ccCeEEECCEEEEEEEcCCCCCCCeEEEECCCCCchHHH------HHHHHHHHHCCCEEEEEeCCCCcccccc---cccc
Confidence 56799999999999999975 457899999997766543 2444677788999999999999998743 3346
Q ss_pred CCHHHHHHHHHHHHHHc-CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhh----------hh
Q 018916 100 LSVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK----------VM 168 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----------~~ 168 (349)
++++++++++.++++++ +.++++++||||||.+|+.+|.++|++|++++++++....+......... ..
T Consensus 74 ~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (290)
T d1mtza_ 74 FTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAI 153 (290)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred ccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHH
Confidence 89999999999999987 78999999999999999999999999999999999876533211111000 00
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHH--------hcCCCChhhhcc
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA--------INGRPDISEGLR 240 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~ 240 (349)
....................+... ..... ....++.......... ......... .....+....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (290)
T d1mtza_ 154 KKYGSSGSYENPEYQEAVNYFYHQ-HLLRS-EDWPPEVLKSLEYAER----RNVYRIMNGPNEFTITGTIKDWDITDKIS 227 (290)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHH-HTSCS-SCCCHHHHHHHHHHHH----SSHHHHHTCSBTTBCCSTTTTCBCTTTGG
T ss_pred HHhhhhccccchhHHHHHHHHhhh-hhccc-ccchHHHHHHHHHHhh----hhhhhhhcchhHHhHhhhhhcccHHHHhh
Confidence 000000000000000011111111 00000 0112222221111110 011111000 001123456678
Q ss_pred ccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 241 KLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 241 ~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++++|+++++|++|.++ ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||+++
T Consensus 228 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 228 AIKIPTLITVGEYDEVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp GCCSCEEEEEETTCSSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred cccceEEEEEeCCCCCCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 89999999999999988 566678888887 99999999999999999999999999999875
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.6e-36 Score=256.55 Aligned_cols=254 Identities=15% Similarity=0.159 Sum_probs=175.5
Q ss_pred eeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018916 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (349)
Q Consensus 30 ~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l 109 (349)
.+|+|+..| ++|+|||+||++.++..|... + ..+..++.+||+|+++|+||||.|..+ ....++...+++++
T Consensus 20 ~~i~y~~~G--~G~~ivllHG~~~~~~~~~~~--~-~~l~~~~~~g~~v~~~D~~G~G~S~~~---~~~~~~~~~~~~~i 91 (283)
T d2rhwa1 20 FNIHYNEAG--NGETVIMLHGGGPGAGGWSNY--Y-RNVGPFVDAGYRVILKDSPGFNKSDAV---VMDEQRGLVNARAV 91 (283)
T ss_dssp EEEEEEEEC--CSSEEEEECCCSTTCCHHHHH--T-TTHHHHHHTTCEEEEECCTTSTTSCCC---CCSSCHHHHHHHHH
T ss_pred EEEEEEEEc--CCCeEEEECCCCCChhHHHHH--H-HHHHHHHHCCCEEEEEeCCCCcccccc---cccccccchhhhhc
Confidence 478999999 679999999999887665321 1 334567789999999999999998743 23346778889999
Q ss_pred HHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHH---hhhhhhhHHHHhcCcchhHHHHHH
Q 018916 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYNKVMSNLLYYYGMCGVVKELLL 186 (349)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
.+++++++.++++++||||||.+|+.+|.++|++|+++|++++....+..... .......... ........ ....
T Consensus 92 ~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~ 169 (283)
T d2rhwa1 92 KGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLY-AEPSYETL-KQML 169 (283)
T ss_dssp HHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHH-HSCCHHHH-HHHH
T ss_pred ccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHh-hhhhhhhH-HHHH
Confidence 99999999999999999999999999999999999999999987643321110 0001111111 11111111 1222
Q ss_pred HhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHH----HHHhcCCCChhhhccccCCceEEEEeCCCccc--hhH
Q 018916 187 KRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHF----LEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEA 260 (349)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~ 260 (349)
..++..... ..++........+... ....... ........+....+.++++|+++++|++|.++ +..
T Consensus 170 ~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 242 (283)
T d2rhwa1 170 QVFLYDQSL------ITEELLQGRWEAIQRQ-PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHG 242 (283)
T ss_dssp HHHCSCGGG------CCHHHHHHHHHHHHHC-HHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHH
T ss_pred HHhhccccc------CcHHHHHHHHHHhhhh-hhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHH
Confidence 222222111 1333333333322211 1111111 11112224566778899999999999999998 566
Q ss_pred HHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 261 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 243 ~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 243 LKLLWNIDD--ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HHHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 778888887 9999999999999999999999999999986
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=7.2e-36 Score=250.65 Aligned_cols=255 Identities=15% Similarity=0.150 Sum_probs=175.8
Q ss_pred eeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~ 101 (349)
.++|.++|.+++|+..| ++|+|||+||++.+...+.. |... ...++++|+|+++|+||||.|..+ ....++
T Consensus 5 ~~~i~~~G~~~~Y~~~G--~G~pvvllHG~~~~~~~~~~---~~~~-~~~l~~~~~vi~~Dl~G~G~S~~~---~~~~~~ 75 (271)
T d1uk8a_ 5 GKSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAYAN---WRLT-IPALSKFYRVIAPDMVGFGFTDRP---ENYNYS 75 (271)
T ss_dssp CEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHH---HTTT-HHHHTTTSEEEEECCTTSTTSCCC---TTCCCC
T ss_pred CCEEEECCEEEEEEEEe--eCCeEEEECCCCCCccHHHH---HHHH-HHHHhCCCEEEEEeCCCCCCcccc---cccccc
Confidence 45788999999999999 57899999999877655321 3233 455678999999999999998753 234578
Q ss_pred HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhH
Q 018916 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (349)
Q Consensus 102 ~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
++++++++..++++++.++++++||||||.+++.+|.++|++++++|++++.............. ..........
T Consensus 76 ~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 150 (271)
T d1uk8a_ 76 KDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAV-----WGYTPSIENM 150 (271)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHH-----HTCCSCHHHH
T ss_pred ccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhh-----hhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999876543322111000 0000000001
Q ss_pred HHHHHHhhcccccccCCCCCCchHHHHHHHHhhh---------hccchhHHHHHHHhcCCCChhhhccccCCceEEEEeC
Q 018916 182 KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLD---------ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 252 (349)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~ 252 (349)
......+....... ............. .............. ....+.+.++++|+++|+|+
T Consensus 151 -~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~P~lii~G~ 220 (271)
T d1uk8a_ 151 -RNLLDIFAYDRSLV------TDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL---ASSDEDIKTLPNETLIIHGR 220 (271)
T ss_dssp -HHHHHHHCSCGGGC------CHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHH---CCCHHHHTTCCSCEEEEEET
T ss_pred -HHHHHHHhhhcccc------hhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhc---cccHHHHHhhccceeEEecC
Confidence 01111111110110 1111111111110 00001111111111 23446678899999999999
Q ss_pred CCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 253 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 253 ~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+|.++ ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 221 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 221 EDQVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp TCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred CCCCcCHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 99998 566778888887 9999999999999999999999999999986
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1e-35 Score=250.00 Aligned_cols=260 Identities=12% Similarity=0.131 Sum_probs=177.4
Q ss_pred EeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 25 IKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 25 i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
|++ +|.+++|..+|++++|+|||+||++.++.. |...+..++++||+|+++|+||||.|..+ ...++++
T Consensus 3 i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~s~~~----~~~~~~~ 72 (275)
T d1a88a_ 3 VTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADD------WDNQMLFFLSHGYRVIAHDRRGHGRSDQP----STGHDMD 72 (275)
T ss_dssp EECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred EEecCCCEEEEEEecCCCCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEecccccccccc----ccccccc
Confidence 455 677999999999999999999999988755 54555677789999999999999998743 2358999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEech-hHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhh----hh---hhhHHHHhc
Q 018916 104 DLADQIAEVLNHFGLGAVMCMGVTA-GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY----NK---VMSNLLYYY 175 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~~~v~lvGhS~-Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----~~---~~~~~~~~~ 175 (349)
++++++.+++++++.++++++|||+ ||.+++.+|.++|++|++++++++............ .. .+...+ ..
T Consensus 73 ~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 151 (275)
T d1a88a_ 73 TYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAAL-AA 151 (275)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHH-HH
T ss_pred ccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhh-hh
Confidence 9999999999999999999999997 667777788999999999999997654321111000 00 000000 00
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.............++.. ............+....................+.. .+..+.+.++++|+++++|++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~ 227 (275)
T d1a88a_ 152 NRAQFYIDVPSGPFYGF---NREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSE-TDFTDDLKRIDVPVLVAHGTDDQ 227 (275)
T ss_dssp CHHHHHHHHHHTTTTTT---TSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCS
T ss_pred hhHHHHHhhhhhhhhhc---ccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhh-hhhhHHHHhhccccceeecCCCC
Confidence 11111111111111111 111111133333333222222223333333333333 56677788999999999999999
Q ss_pred cc--hh-HHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 256 FH--SE-AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 256 ~~--~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
++ .. .+.+.+.+++ +++++++++||++++|+|+++++.|.+||+
T Consensus 228 ~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 228 VVPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp SSCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 98 33 3456677777 999999999999999999999999999997
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=1.7e-35 Score=250.91 Aligned_cols=270 Identities=13% Similarity=0.141 Sum_probs=176.5
Q ss_pred CCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+-+.+.++++|.+++|...| ++|+|||+||+++++.. |... ...+.++|+|+++|+||||.|.........
T Consensus 7 ~~~~~~~~~~~~~l~y~~~G--~gp~vv~lHG~~~~~~~------~~~~-~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~ 77 (293)
T d1ehya_ 7 DFKHYEVQLPDVKIHYVREG--AGPTLLLLHGWPGFWWE------WSKV-IGPLAEHYDVIVPDLRGFGDSEKPDLNDLS 77 (293)
T ss_dssp GSCEEEEECSSCEEEEEEEE--CSSEEEEECCSSCCGGG------GHHH-HHHHHTTSEEEEECCTTSTTSCCCCTTCGG
T ss_pred CCcceEEEECCEEEEEEEEC--CCCeEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEecCCcccCCccccccccc
Confidence 34778899999999999999 68999999999988754 4333 455677999999999999998765444445
Q ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh---------hh-hhh
Q 018916 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL---------YN-KVM 168 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---------~~-~~~ 168 (349)
.++++++++++.+++++++.++++++||||||.+|+.+|.++|+++.+++++++........... .. ...
T Consensus 78 ~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (293)
T d1ehya_ 78 KYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQL 157 (293)
T ss_dssp GGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTC
T ss_pred cccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhcc
Confidence 68999999999999999999999999999999999999999999999999999875432111000 00 000
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcC-CCCh--hhhccccCC
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING-RPDI--SEGLRKLQC 244 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~--~~~l~~i~~ 244 (349)
....................++....... .....+....+....... ........+..... .... ......+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T d1ehya_ 158 DMAVEVVGSSREVCKKYFKHFFDHWSYRD--ELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDL 235 (293)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHTSSSS--CCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCS
T ss_pred chhhhhhccchhHHHHHHHHhhhhccccc--ccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCC
Confidence 00000011111111112222222101110 111333333333322211 11112222222211 1111 122456889
Q ss_pred ceEEEEeCCCccc--hhHHH-HHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 245 RSLIFVGESSPFH--SEAVH-MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
|+++|+|++|.++ +...+ +.+..++ .++++++++||++++|+|+++++.|.+|++
T Consensus 236 Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 236 PVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred ceEEEEeCCCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 9999999999988 33434 4555566 999999999999999999999999999974
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=2.8e-35 Score=247.32 Aligned_cols=261 Identities=13% Similarity=0.098 Sum_probs=175.8
Q ss_pred EEeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCH
Q 018916 24 LIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (349)
Q Consensus 24 ~i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 102 (349)
+++| +|.+++|...| ++|+|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...+++
T Consensus 2 ~~~t~dG~~l~y~~~G--~g~~ivlvHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~ 69 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG--QGRPVVFIHGWPLNGDA------WQDQLKAVVDAGYRGIAHDRRGHGHSTPV----WDGYDF 69 (274)
T ss_dssp EEECTTSCEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSH
T ss_pred eEECcCCCEEEEEEEC--CCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEeCCCCcccccc----cccccc
Confidence 5677 55699999999 67899999999988755 54555667788999999999999998743 235899
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh-hcccceeEEecCCCCCCChhHHh---hhhhhhHHHHhc--C
Q 018916 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWL---YNKVMSNLLYYY--G 176 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~--~ 176 (349)
+++++|+.+++++++.++++++||||||.+++.+++++ |++|++++++++........... ........+... .
T Consensus 70 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (274)
T d1a8qa_ 70 DTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLT 149 (274)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999877654 88999999999765432110000 000000000000 0
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
............++.. ..... .......+.+..................... .+..+.+.++++|+++|+|++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~G~~D~~ 225 (274)
T d1a8qa_ 150 ERSQFWKDTAEGFFSA-NRPGN--KVTQGNKDAFWYMAMAQTIEGGVRCVDAFGY-TDFTEDLKKFDIPTLVVHGDDDQV 225 (274)
T ss_dssp HHHHHHHHHHHHHTTT-TSTTC--CCCHHHHHHHHHHHTTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSS
T ss_pred hhHHHhhhhhhhhhhc-cccch--hhhhhHHHHHHHhhhccchhhhhhHHHHhhc-cchHHHHHhccceeeeeccCCCCC
Confidence 0000111122333333 21111 1122223333222222233333333333333 466678899999999999999998
Q ss_pred c--hh-HHHHHHHhcccceeEEEEcCCCCcccc--cChhhHHHHHHHHHhh
Q 018916 257 H--SE-AVHMTSKIDRRYSALVEVQACGSMVTE--EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 257 ~--~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~ 302 (349)
+ +. .+.+.+.+++ +++++++++||++++ ++|++|++.|.+||++
T Consensus 226 ~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 226 VPIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp SCGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHhCCC--CEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 8 33 3556677787 999999999999887 6699999999999975
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=2.8e-35 Score=247.98 Aligned_cols=254 Identities=14% Similarity=0.107 Sum_probs=165.6
Q ss_pred eEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
+|+|...| ++|+|||+||++.++.. |...+..++++||+|+++|+||||.|+.+ ...++++++++|+.
T Consensus 14 ~i~y~~~G--~g~~illlHG~~~~~~~------~~~~~~~l~~~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~di~ 81 (279)
T d1hkha_ 14 ELYYEDQG--SGQPVVLIHGYPLDGHS------WERQTRELLAQGYRVITYDRRGFGGSSKV----NTGYDYDTFAADLH 81 (279)
T ss_dssp EEEEEEES--SSEEEEEECCTTCCGGG------GHHHHHHHHHTTEEEEEECCTTSTTSCCC----SSCCSHHHHHHHHH
T ss_pred EEEEEEEc--cCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEechhhCCcccc----ccccchhhhhhhhh
Confidence 78999999 67899999999988755 54555677799999999999999998743 23589999999999
Q ss_pred HHHHHcCCCcEEEEEechhH-HHHHHHHHhhhcccceeEEecCCCCCCChhHHh---hhhhhh---HHHHhcCcchhHHH
Q 018916 111 EVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL---YNKVMS---NLLYYYGMCGVVKE 183 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~ 183 (349)
+++++++.++++++|||||| .++..+|..+|++|.+++++++........... ...... .............+
T Consensus 82 ~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
T d1hkha_ 82 TVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTD 161 (279)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred hhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhh
Confidence 99999999999999999996 566667777899999999998765432110000 000000 00000000111111
Q ss_pred HHHHhhcccc-cccCCCCCCchHHHHHHHHhhhhc-cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--h-
Q 018916 184 LLLKRYFSKQ-EVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S- 258 (349)
Q Consensus 184 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~- 258 (349)
....+.... .... ...+............. ....+...........+..+.+..+++|+++++|++|.++ +
T Consensus 162 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~ 237 (279)
T d1hkha_ 162 -FYKNFYNLDENLGS---RISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDA 237 (279)
T ss_dssp -HHHHHHTHHHHBTT---TBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTT
T ss_pred -hhhhhcccchhhhh---hhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHH
Confidence 111111110 1100 11222222222222111 1112221112122212233456778999999999999987 2
Q ss_pred hHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 259 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 238 ~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 238 TARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp THHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 34667777887 8999999999999999999999999999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-35 Score=253.96 Aligned_cols=274 Identities=13% Similarity=0.166 Sum_probs=177.5
Q ss_pred CCCceeEEeC-CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 18 PSGKDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 18 ~~~~~~~i~~-~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
....+.++++ +|.+++|...| ++|+|||+||+++++.. |...+..+.++||+||++|+||||.|..+ ..
T Consensus 9 ~~~~~~~v~~~~g~~i~y~~~G--~gp~vlllHG~~~~~~~------~~~~~~~L~~~g~~vi~~D~~G~G~S~~~--~~ 78 (322)
T d1zd3a2 9 SDMSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYS------WRYQIPALAQAGYRVLAMDMKGYGESSAP--PE 78 (322)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC--CSSEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEEEECTTSTTSCCC--SC
T ss_pred CCCceeEEEECCCCEEEEEEEc--CCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEeccccccccccc--cc
Confidence 3557778888 57789999999 67999999999988755 55556667678999999999999998754 22
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh----hHHhhhhhhhHHH
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW----TEWLYNKVMSNLL 172 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~ 172 (349)
...++++++++++.+++++++.++++++||||||.+++.+|.++|++|++++++++....... .............
T Consensus 79 ~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 79 IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhH
Confidence 345899999999999999999999999999999999999999999999999999976543211 1000000000000
Q ss_pred HhcCcchhHH-------HHHHHhhcccccc---------------------cCCCCCCchHHHHHHHHhhhhccchhHHH
Q 018916 173 YYYGMCGVVK-------ELLLKRYFSKQEV---------------------RGNAQVPESDIVQACRRLLDERQSSNVWH 224 (349)
Q Consensus 173 ~~~~~~~~~~-------~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (349)
.......... ......++..... ..............+...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLN 238 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccc
Confidence 0000000000 0011111110000 00000112222222222221111111110
Q ss_pred HHHHhc--CCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHH
Q 018916 225 FLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 300 (349)
Q Consensus 225 ~~~~~~--~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 300 (349)
.+..+. ...+......++++|+++|+|++|.++ +..+.+.+.+++ .++++++++||++++|+|++|++.|.+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~~FL 316 (322)
T d1zd3a2 239 WYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHIEDCGHWTQMDKPTEVNQILIKWL 316 (322)
T ss_dssp TTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred cccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 000000 001122345688999999999999998 455567777777 99999999999999999999999999999
Q ss_pred hhc
Q 018916 301 MGY 303 (349)
Q Consensus 301 ~~~ 303 (349)
++.
T Consensus 317 ~~~ 319 (322)
T d1zd3a2 317 DSD 319 (322)
T ss_dssp HHH
T ss_pred hhc
Confidence 875
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.6e-34 Score=241.06 Aligned_cols=261 Identities=15% Similarity=0.157 Sum_probs=173.4
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
+...+|.+++|+..| ++|+|||+||++.++.. |...+..+.++||+|+++|+||||.|+.+ ...++++
T Consensus 3 f~~~dG~~i~y~~~G--~g~pvvllHG~~~~~~~------~~~~~~~l~~~~~~vi~~D~~G~G~S~~~----~~~~~~~ 70 (273)
T d1a8sa_ 3 FTTRDGTQIYYKDWG--SGQPIVFSHGWPLNADS------WESQMIFLAAQGYRVIAHDRRGHGRSSQP----WSGNDMD 70 (273)
T ss_dssp EECTTSCEEEEEEES--CSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred EEeeCCcEEEEEEEC--CCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEechhcCccccc----ccccccc
Confidence 445577899999999 67899999999988755 54555667788999999999999998743 2358999
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHH-HHhhhcccceeEEecCCCCCCChhHHh---hhhhhhHHHHhcC---
Q 018916 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLF-AMKYRHRVLGLILVSPLCKAPSWTEWL---YNKVMSNLLYYYG--- 176 (349)
Q Consensus 104 ~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~-a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~--- 176 (349)
++++++.+++++++.++.+++|||+||.+++.+ +..+|++|.+++++++........... ........+....
T Consensus 71 ~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T d1a8sa_ 71 TYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHH
Confidence 999999999999999999999999988766655 556799999999999766432110000 0000000000000
Q ss_pred cchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCcc
Q 018916 177 MCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 256 (349)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~ 256 (349)
............++.. . ...........+.+..................+.. .+..+.+.++++|+++|+|++|.+
T Consensus 151 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlii~g~~D~~ 226 (273)
T d1a8sa_ 151 RSQLYKDLASGPFFGF-N--QPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TDFTEDLKKIDVPTLVVHGDADQV 226 (273)
T ss_dssp HHHHHHHHHHTTSSST-T--STTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHTCCSCEEEEEETTCSS
T ss_pred HHHHHHHHhhhhhhhc-c--cchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhh-hhhhHHHHhhccceEEEecCCCCC
Confidence 0001111111111111 1 11111233333333332222233333333333333 466778899999999999999998
Q ss_pred c--hhHHHHHHHh-cccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 257 H--SEAVHMTSKI-DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 257 ~--~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+ +....+.+.+ ++ +++++++++||++++|+|+++++.|.+||++
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~G 273 (273)
T d1a8sa_ 227 VPIEASGIASAALVKG--STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp SCSTTTHHHHHHHSTT--CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHcCC
Confidence 8 4445555444 55 8999999999999999999999999999974
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.3e-34 Score=243.53 Aligned_cols=252 Identities=12% Similarity=0.119 Sum_probs=166.1
Q ss_pred CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018916 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (349)
Q Consensus 29 ~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 108 (349)
+.+|+|...| ++|+|||+||+++++.. |...+..++++||+|+++|+||||.|+.. ...++++++++|
T Consensus 12 ~v~i~y~~~G--~G~~ivllHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~~d 79 (277)
T d1brta_ 12 SIDLYYEDHG--TGQPVVLIHGFPLSGHS------WERQSAALLDAGYRVITYDRRGFGQSSQP----TTGYDYDTFAAD 79 (277)
T ss_dssp EEEEEEEEEC--SSSEEEEECCTTCCGGG------GHHHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHHHH
T ss_pred cEEEEEEEEc--cCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEeCCCCCccccc----ccccchhhhhhh
Confidence 4478899999 68899999999988755 54555677788999999999999998732 235899999999
Q ss_pred HHHHHHHcCCCcEEEEEechhH-HHHHHHHHhhhcccceeEEecCCCCCCChhHH--------hhhhhhhHHHHhcCcch
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTEW--------LYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 179 (349)
+.+++++++.++++++|||||| .++..++.++|++|+++|++++.......... .......... ......
T Consensus 80 l~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (277)
T d1brta_ 80 LNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAV-KADRYA 158 (277)
T ss_dssp HHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHH-HHCHHH
T ss_pred hhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhh-hccchh
Confidence 9999999999999999999996 55666677889999999999976543211000 0000000000 000001
Q ss_pred hHHHHHHHhhcccc-cccCCCCCCchHHHHHHHHhhhhccchhHHH-HHHHhcCCCChhhhccccCCceEEEEeCCCccc
Q 018916 180 VVKELLLKRYFSKQ-EVRGNAQVPESDIVQACRRLLDERQSSNVWH-FLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 257 (349)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~ 257 (349)
... .....++... .... .............. ....... .........+....+.++++|+++++|++|.++
T Consensus 159 ~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~ 231 (277)
T d1brta_ 159 FYT-GFFNDFYNLDENLGT---RISEEAVRNSWNTA---ASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTL 231 (277)
T ss_dssp HHH-HHHHHHTTHHHHBTT---TBCHHHHHHHHHHH---HHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSS
T ss_pred hhh-hccccccccchhhhh---hhhHHHhhhhhccc---chhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCc
Confidence 111 1111111110 1100 00111111111111 1111111 111222334566778899999999999999988
Q ss_pred --hh-HHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 258 --SE-AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 258 --~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+. .+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 232 PIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CGGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 33 3456677777 9999999999999999999999999999975
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=2.4e-34 Score=240.79 Aligned_cols=260 Identities=12% Similarity=0.111 Sum_probs=174.2
Q ss_pred eEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCH
Q 018916 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 102 (349)
++++.+|.+++|+..| ++|+|||+||+++++.. |...+..+.++||+|+++|+||||.|+.+ ...+++
T Consensus 2 ~f~~~dG~~l~y~~~G--~g~~vv~lHG~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~ 69 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADM------WEYQMEYLSSRGYRTIAFDRRGFGRSDQP----WTGNDY 69 (271)
T ss_dssp EEECTTSCEEEEEEES--SSSEEEEECCTTCCGGG------GHHHHHHHHTTTCEEEEECCTTSTTSCCC----SSCCSH
T ss_pred EEEeECCeEEEEEEEc--CCCeEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEEecccccccccc----cccccc
Confidence 5788899999999999 57899999999988754 54555566678999999999999998743 235799
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHH-HHHhhhcccceeEEecCCCCCCChhHHh----hhhhhhHHHHh-c-
Q 018916 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL-FAMKYRHRVLGLILVSPLCKAPSWTEWL----YNKVMSNLLYY-Y- 175 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~-~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~-~- 175 (349)
+++++++.++++.++.++++++|||+||.+++. +|.++|+++.+++++++........... ........... .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1va4a_ 70 DTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred ccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhh
Confidence 999999999999999999999999998876654 5667899999999999776432111000 00000000000 0
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
...... ......++.. ... ................................ .+....+.++++|+++++|++|.
T Consensus 150 ~~~~~~-~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvl~i~g~~D~ 223 (271)
T d1va4a_ 150 DRAQFI-SDFNAPFYGI-NKG---QVVSQGVQTQTLQIALLASLKATVDCVTAFAE-TDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp HHHHHH-HHHHHHHHTG-GGT---CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCS
T ss_pred hhhhhh-hhhcchhhcc-cch---hhhhhhHHHHHHhhhhhhhhhhhhhcccccch-hhhhhhhhhcccceeecccCCCC
Confidence 000011 1111111111 110 01122222222222222223333333333333 45667788999999999999999
Q ss_pred cc--hhHHHHH-HHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 256 FH--SEAVHMT-SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 256 ~~--~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
++ +...++. +.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 224 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 224 IVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 88 4545554 44566 9999999999999999999999999999985
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=3.3e-34 Score=245.59 Aligned_cols=263 Identities=11% Similarity=0.062 Sum_probs=171.5
Q ss_pred eeEEe----CCCeeEEEEEccCCC-CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 22 DNLIK----TSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 22 ~~~i~----~~~~~l~~~~~g~~~-~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
.+++. .+|.+++|...|+++ .|+|||+||++.++.. |...+..+..+||+|+++|+||||.|+.+ ..
T Consensus 22 ~~~~~~~~~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~------~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~--~~ 93 (310)
T d1b6ga_ 22 PNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYL------YRKMIPVFAESGARVIAPDFFGFGKSDKP--VD 93 (310)
T ss_dssp CEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGG------GTTTHHHHHHTTCEEEEECCTTSTTSCEE--SC
T ss_pred CceeccccCCCCEEEEEEEecCCCCCCEEEEECCCCCchHH------HHHHHHHhhccCceEEEeeecCccccccc--cc
Confidence 44554 477899999999864 5788999999988755 55555677788999999999999999853 23
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChh--HHh---hhh---hh
Q 018916 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWL---YNK---VM 168 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~---~~~---~~ 168 (349)
...++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++........ .+. ... ..
T Consensus 94 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (310)
T d1b6ga_ 94 EEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFT 173 (310)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHH
T ss_pred cccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhh
Confidence 4458999999999999999999999999999999999999999999999999999876433211 100 000 00
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhcc-chhHHHHHHHhcCCC---------Chhhh
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGRP---------DISEG 238 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~ 238 (349)
................+...+. + . ..+.....+...+.... ......+........ .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T d1b6ga_ 174 AWKYDLVTPSDLRLDQFMKRWA-P-T-------LTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFW 244 (310)
T ss_dssp HHHHHHHSCSSCCHHHHHHHHS-T-T-------CCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhccchhhhhhhhhhccC-c-c-------ccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHh
Confidence 0000000000000011111111 1 0 01222222222111111 111111111111100 01123
Q ss_pred ccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 239 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 239 l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
..++++|+++++|++|.++ .....+.+.+++ ..++++++++||+++.++|+.+++.|..||++
T Consensus 245 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 245 QNDWNGQTFMAIGMKDKLLGPDVMYPMKALING-CPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHTCCSEEEEEEETTCSSSSHHHHHHHHHHSTT-CCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred hcccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 4578999999999999988 455567777776 23788899999999999999999999999985
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.5e-35 Score=242.58 Aligned_cols=248 Identities=14% Similarity=0.095 Sum_probs=159.6
Q ss_pred EEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 018916 32 LSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE 111 (349)
Q Consensus 32 l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~ 111 (349)
|+|+..|. ++++|||+||++.++.. |... ...+.++|+|+++|+||||.|+.. ...++.+++ +
T Consensus 2 i~y~~~G~-g~~~lvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~D~~G~G~S~~~-----~~~~~~d~~----~ 64 (256)
T d1m33a_ 2 IWWQTKGQ-GNVHLVLLHGWGLNAEV------WRCI-DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMA----E 64 (256)
T ss_dssp CCEEEECC-CSSEEEEECCTTCCGGG------GGGT-HHHHHTTSEEEEECCTTSTTCCSC-----CCCCHHHHH----H
T ss_pred eEEEEECC-CCCeEEEECCCCCCHHH------HHHH-HHHHhCCCEEEEEeCCCCCCcccc-----ccccccccc----c
Confidence 67888883 45789999999988754 4333 455678999999999999998742 235665544 3
Q ss_pred HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhh-hhhhHHHHhcCcchhHHHHHHHhhc
Q 018916 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN-KVMSNLLYYYGMCGVVKELLLKRYF 190 (349)
Q Consensus 112 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (349)
.+..+..++++++||||||.+++.+|.++|+++++++++++.........+... ......+. ....... ......++
T Consensus 65 ~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~ 142 (256)
T d1m33a_ 65 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQ-QQLSDDQ-QRTVERFL 142 (256)
T ss_dssp HHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHH-HHHHHHH-HHHHHHHH
T ss_pred ccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHH-hhhhhhh-HHHHHHHh
Confidence 444556789999999999999999999999999999999876543221111000 00000000 0000000 11111121
Q ss_pred ccccccCCCCCCchHHHHHHHHhhhhc---cchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHH
Q 018916 191 SKQEVRGNAQVPESDIVQACRRLLDER---QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 265 (349)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~ 265 (349)
....... ................. ....+......+.. .+..+.++++++|+++|+|++|.++ +..+.+.+
T Consensus 143 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~ 218 (256)
T d1m33a_ 143 ALQTMGT---ETARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 218 (256)
T ss_dssp HTTSTTS---TTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTT
T ss_pred hhhhccc---cchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcc-cchHHHHHhccCCccccccccCCCCCHHHHHHHHH
Confidence 1101110 11122222222222221 12222333333332 4667788999999999999999998 45566777
Q ss_pred HhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 266 KIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 266 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+++ +++++++++||++++|+|+++++.|.+||+++|
T Consensus 219 ~~~~--~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 219 LWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQRVG 255 (256)
T ss_dssp TCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTSC
T ss_pred HCCC--CEEEEECCCCCchHHHCHHHHHHHHHHHHHHcC
Confidence 7777 899999999999999999999999999999987
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=2.9e-33 Score=236.94 Aligned_cols=270 Identities=10% Similarity=0.018 Sum_probs=171.5
Q ss_pred cCCCCCCceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 14 ETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
...++ .+.++++++|.+++|...| ++|+|||+||+++++.. |... ...++++|+||++|+||||.|+...
T Consensus 3 ~~~p~-~~~~fi~~~g~~i~y~~~G--~g~~vvllHG~~~~~~~------~~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~ 72 (298)
T d1mj5a_ 3 GAKPF-GEKKFIEIKGRRMAYIDEG--TGDPILFQHGNPTSSYL------WRNI-MPHCAGLGRLIACDLIGMGDSDKLD 72 (298)
T ss_dssp CSSCS-SCCEEEEETTEEEEEEEES--CSSEEEEECCTTCCGGG------GTTT-GGGGTTSSEEEEECCTTSTTSCCCS
T ss_pred CCcCC-CCCEEEEECCEEEEEEEEc--CCCcEEEECCCCCCHHH------HHHH-HHHHhcCCEEEEEeCCCCCCCCCCc
Confidence 34444 4568999999999999999 57899999999988755 4333 3567788999999999999998654
Q ss_pred CCCCCCCCHHHHHHHHHHHH-HHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHH
Q 018916 94 SDDEPVLSVDDLADQIAEVL-NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l-~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (349)
..........+..+++..++ +..+.++++++||||||.+++.+|.++|++|.+++++++....................
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T d1mj5a_ 73 PSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQA 152 (298)
T ss_dssp SCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH
T ss_pred cccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhh
Confidence 44444566777777766665 55567899999999999999999999999999999999776544322211100000000
Q ss_pred Hhc-------CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh------------cCCC
Q 018916 173 YYY-------GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI------------NGRP 233 (349)
Q Consensus 173 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 233 (349)
... ................. ............................. ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
T d1mj5a_ 153 FRSQAGEELVLQDNVFVEQVLPGLILR--------PLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIAR 224 (298)
T ss_dssp HHSTTHHHHHTTTCHHHHTHHHHTSSS--------CCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhccccccc--------cchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhh
Confidence 000 00000000011111111 00111112111111110000000000000 0001
Q ss_pred ChhhhccccCCceEEEEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 234 DISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 234 ~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+....+..+++|+++++|++|.+. ....++.+.+++ .+++++ ++||++++|+|+++++.|.+||+++.
T Consensus 225 ~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~p~--~~~~~~-~~GH~~~~e~P~~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 225 DYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPN--QTEITV-AGAHFIQEDSPDEIGAAIAAFVRRLR 293 (298)
T ss_dssp HHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSS--EEEEEE-EESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhcceeEEEEecCCCCcChHHHHHHHHHCCC--CEEEEe-CCCCchHHhCHHHHHHHHHHHHhhhc
Confidence 223456788999999999999887 566677777776 777666 58999999999999999999999974
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=4.2e-33 Score=239.15 Aligned_cols=128 Identities=14% Similarity=0.075 Sum_probs=109.8
Q ss_pred ceeEEeCC-CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTS-HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 21 ~~~~i~~~-~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+.++++++ |.+++|+..|++++|+|||+||+++++.. |. .....+.++|+||++|+||||.|+.+ .....
T Consensus 12 ~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~------~~-~~~~~l~~~~~Vi~~D~rG~G~S~~~--~~~~~ 82 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN------DK-MRRFHDPAKYRIVLFDQRGSGRSTPH--ADLVD 82 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC------GG-GGGGSCTTTEEEEEECCTTSTTSBST--TCCTT
T ss_pred CCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccc------hH-HHhHHhhcCCEEEEEeccccCCCCcc--ccccc
Confidence 77888885 45899999999899999999999876544 32 22455678999999999999999854 23456
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|++++++++.....
T Consensus 83 ~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~ 140 (313)
T d1azwa_ 83 NTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRR 140 (313)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCH
T ss_pred hhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccc
Confidence 8999999999999999999999999999999999999999999999999999877653
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-35 Score=235.22 Aligned_cols=201 Identities=13% Similarity=0.198 Sum_probs=160.8
Q ss_pred CCceeEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
..++.+++++|.+++|+..++ +.+++|||+||++.+...|... ..+..+.++||+|+++|+||||.|+.+..
T Consensus 5 ~~~e~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~----~~~~~la~~gy~via~D~~G~G~S~~~~~- 79 (208)
T d1imja_ 5 EQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNL----GTLHRLAQAGYRAVAIDLPGLGHSKEAAA- 79 (208)
T ss_dssp EECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHH----THHHHHHHTTCEEEEECCTTSGGGTTSCC-
T ss_pred CceEEEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhh----HHHHHHHHcCCeEEEeecccccCCCCCCc-
Confidence 346678899999999998775 3567999999999887664211 12356778899999999999999875422
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhc
Q 018916 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (349)
...++..+.++++.++++.++.++++|+||||||.+++.+|.++|++++++|+++|....
T Consensus 80 -~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~------------------- 139 (208)
T d1imja_ 80 -PAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD------------------- 139 (208)
T ss_dssp -SSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG-------------------
T ss_pred -ccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccc-------------------
Confidence 233555666778889999999999999999999999999999999999999999874210
Q ss_pred CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCc
Q 018916 176 GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 255 (349)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~ 255 (349)
.+ ..+.+.++++|+|+|+|++|.
T Consensus 140 ------------------~~---------------------------------------~~~~~~~i~~P~Lii~G~~D~ 162 (208)
T d1imja_ 140 ------------------KI---------------------------------------NAANYASVKTPALIVYGDQDP 162 (208)
T ss_dssp ------------------GS---------------------------------------CHHHHHTCCSCEEEEEETTCH
T ss_pred ------------------cc---------------------------------------ccccccccccccccccCCcCc
Confidence 00 001234678999999999999
Q ss_pred cchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 256 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++...+..+.+++ .++.+++++||..++++|+++.+.|.+||+++
T Consensus 163 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 163 MGQTSFEHLKQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp HHHHHHHHHTTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHhCCC--CeEEEECCCCCchhhhCHHHHHHHHHHHHhcC
Confidence 88655566667776 99999999999999999999999999999874
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=1.4e-31 Score=221.46 Aligned_cols=238 Identities=11% Similarity=0.055 Sum_probs=155.7
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~-~ 119 (349)
.+++|||+||+++++.. |...+..+.++||+|+++|+||||.|+.+ ....++++++++++..+++.... .
T Consensus 1 eG~~vvllHG~~~~~~~------w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (258)
T d1xkla_ 1 EGKHFVLVHGACHGGWS------WYKLKPLLEAAGHKVTALDLAASGTDLRK---IEELRTLYDYTLPLMELMESLSADE 71 (258)
T ss_dssp CCCEEEEECCTTCCGGG------GTTHHHHHHHTTCEEEECCCTTSTTCCCC---GGGCCSHHHHHHHHHHHHHTSCSSS
T ss_pred CCCcEEEECCCCCCHHH------HHHHHHHHHhCCCEEEEecCCCCCCCCCC---CCCCcchHHHHHHHhhhhhcccccc
Confidence 36799999999988755 55555566677999999999999999743 23457999999999999988765 5
Q ss_pred cEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCc---c-------------hhHHH
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM---C-------------GVVKE 183 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------~~~~~ 183 (349)
+++++||||||.+++.++.++|+++++++++++......................... . .....
T Consensus 72 ~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T d1xkla_ 72 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 151 (258)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred cccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccH
Confidence 8999999999999999999999999999999987654321111100000000000000 0 00000
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 261 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~ 261 (349)
......... ....+......... ............ .+....+..+++|+++|+|++|.++ +..+
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 217 (258)
T d1xkla_ 152 KFLAHKLYQ--------LCSPEDLALASSLV--RPSSLFMEDLSK----AKYFTDERFGSVKRVYIVCTEDKGIPEEFQR 217 (258)
T ss_dssp HHHHHHTST--------TSCHHHHHHHHHHC--CCBCCCHHHHHH----CCCCCTTTGGGSCEEEEEETTCTTTTHHHHH
T ss_pred HHHHHHhhh--------cccHHHHHHhhhhh--hhhhhhhhhhhh----hhhcccccccccceeEeeecCCCCCCHHHHH
Confidence 000000000 00000000000000 000000011110 2333456678899999999999998 5566
Q ss_pred HHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 262 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+.+.+++ +++++++++||++++|+|+++++.|.+|++++
T Consensus 218 ~~~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 218 WQIDNIGV--TEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp HHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 78888887 99999999999999999999999999999875
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=8.7e-32 Score=222.85 Aligned_cols=233 Identities=9% Similarity=0.047 Sum_probs=152.2
Q ss_pred EEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CCcEEE
Q 018916 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LGAVMC 123 (349)
Q Consensus 45 vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~v~l 123 (349)
.|||||++.++.. |...+..+.++||+|+++|+||||.|+.+ ....++++++++++.++++.++ .+++++
T Consensus 5 ~vliHG~~~~~~~------w~~~~~~L~~~g~~Via~Dl~G~G~S~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 75 (256)
T d3c70a1 5 FVLIHTICHGAWI------WHKLKPLLEALGHKVTALDLAASGVDPRQ---IEEIGSFDEYSEPLLTFLEALPPGEKVIL 75 (256)
T ss_dssp EEEECCTTCCGGG------GTTHHHHHHHTTCEEEEECCTTSTTCSCC---GGGCCSHHHHTHHHHHHHHHSCTTCCEEE
T ss_pred EEEeCCCCCCHHH------HHHHHHHHHhCCCEEEEEcCCCCCCCCCC---CCCCCCHHHHHHHhhhhhhhhccccceee
Confidence 5899999988755 55555566678999999999999999743 2245899999999999988765 688999
Q ss_pred EEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc---------------hhHHHHHHHh
Q 018916 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC---------------GVVKELLLKR 188 (349)
Q Consensus 124 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 188 (349)
+||||||.+++.++.++|++|+++|++++.......................... ..........
T Consensus 76 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T d3c70a1 76 VGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLREN 155 (256)
T ss_dssp EEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred cccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhh
Confidence 9999999999999999999999999999776443221111000000000000000 0000000011
Q ss_pred hcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHH
Q 018916 189 YFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 266 (349)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~ 266 (349)
.+.. ............. ....... ..............+++|+++|+|++|.++ +..+.+.+.
T Consensus 156 ~~~~----------~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~ 220 (256)
T d3c70a1 156 LYTL----------CGPEEYELAKMLT-RKGSLFQ----NILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIEN 220 (256)
T ss_dssp TSTT----------SCHHHHHHHHHHC-CCBCCCH----HHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHH
T ss_pred hhhh----------cchhhHHHhhhhh-hhhhHHH----hhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHH
Confidence 1000 0000011101000 0000000 011112233345567899999999999998 456678888
Q ss_pred hcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 267 IDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 267 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+++ .++++++++||++++|+|+++++.|.+|++++
T Consensus 221 ~p~--~~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 221 YKP--DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp SCC--SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 887 99999999999999999999999999999875
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=1.4e-30 Score=215.99 Aligned_cols=255 Identities=14% Similarity=0.044 Sum_probs=153.1
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 107 (349)
.+.+++|...+ +++|+|||+||+++++.. |...+..+.+.||+|+++|+||||.|.... .........+.
T Consensus 3 ~~~~lh~~~~~-~~~P~ivllHG~~~~~~~------~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~---~~~~~~~~~~~ 72 (264)
T d1r3da_ 3 LSNQLHFAKPT-ARTPLVVLVHGLLGSGAD------WQPVLSHLARTQCAALTLDLPGHGTNPERH---CDNFAEAVEMI 72 (264)
T ss_dssp CCEEEESSCCB-TTBCEEEEECCTTCCGGG------GHHHHHHHTTSSCEEEEECCTTCSSCC----------CHHHHHH
T ss_pred cCCeEEEcCCC-CCCCeEEEeCCCCCCHHH------HHHHHHHHHhCCCEEEEEeccccccccccc---ccccchhhhhh
Confidence 35677876655 467899999999988755 545555555679999999999999887432 22233334444
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC---hhHHhhhhhhhHHHHhcCcchhHHHH
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKEL 184 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
+...+....+.++++++||||||.+++.++.++|+.+.+++++.+...... .............+......... ..
T Consensus 73 ~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 151 (264)
T d1r3da_ 73 EQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPI-EH 151 (264)
T ss_dssp HHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCH-HH
T ss_pred hhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhh-hh
Confidence 444444555668999999999999999999999999998887765443321 11111111111111000000001 11
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh--cCCCChhhhccccCCceEEEEeCCCccchhHHH
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVH 262 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~ 262 (349)
....++.. .... ............................. .......+.+..+++|+++|+|++|..+. .
T Consensus 152 ~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~---~ 224 (264)
T d1r3da_ 152 VLSDWYQQ-AVFS---SLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ---Q 224 (264)
T ss_dssp HHHHHTTS-GGGT---TCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH---H
T ss_pred hhhhhhhh-hhhc---ccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH---H
Confidence 11222222 1111 11233333333333222222222222221 12234556788899999999999997642 2
Q ss_pred HHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 263 MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+ .++ .++++++++||++++|+|+++++.|.+||+.+
T Consensus 225 ~~~-~~~--~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 225 LAE-SSG--LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HHH-HHC--SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred HHh-cCC--CeEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 222 344 89999999999999999999999999999875
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=8.6e-30 Score=216.73 Aligned_cols=127 Identities=11% Similarity=0.051 Sum_probs=110.6
Q ss_pred ceeEEeCC-CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTS-HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 21 ~~~~i~~~-~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+.+++++. |.+|+|+..|++++|+||||||+++++.. |... ...+.++|+||++|+||||.|... .....
T Consensus 12 ~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~------w~~~-~~~l~~~~~vi~~D~rG~G~S~~~--~~~~~ 82 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS------PHHR-QLFDPERYKVLLFDQRGCGRSRPH--ASLDN 82 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC------GGGG-GGSCTTTEEEEEECCTTSTTCBST--TCCTT
T ss_pred cCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccc------hHHH-HHHhhcCCEEEEEeCCCccccccc--ccccc
Confidence 56788884 66999999999889999999999988754 4333 466788999999999999999754 33456
Q ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
++..++++++..++++++.++++++|||+||.++..+|..+|++|.+++++++....
T Consensus 83 ~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~ 139 (313)
T d1wm1a_ 83 NTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR 139 (313)
T ss_dssp CSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred cchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccccc
Confidence 899999999999999999999999999999999999999999999999999987654
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.96 E-value=8.8e-29 Score=216.88 Aligned_cols=282 Identities=12% Similarity=0.047 Sum_probs=164.3
Q ss_pred CCCCCCceeEEeCCCe-eEEEE--Ecc------CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC
Q 018916 15 TPPPSGKDNLIKTSHG-SLSVT--IYG------DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG 85 (349)
Q Consensus 15 ~~~~~~~~~~i~~~~~-~l~~~--~~g------~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G 85 (349)
...+..+++.+.|.+| .|..+ .++ .+.+|+|||+||+++++..|.....-...+..+.++||+|+++|+||
T Consensus 22 ~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG 101 (377)
T d1k8qa_ 22 YWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRG 101 (377)
T ss_dssp HTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTT
T ss_pred HcCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCC
Confidence 3456678888998554 44332 222 24678999999999998776433211234556778999999999999
Q ss_pred CCCCCCCCCC-----CCCCCCHH-----HHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 86 HEFGAAAISD-----DEPVLSVD-----DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 86 ~G~s~~~~~~-----~~~~~~~~-----~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
||.|+.+... ....++++ ++++++..+++.++.++++++||||||++++.+|.++|+.+++++++.....
T Consensus 102 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~ 181 (377)
T d1k8qa_ 102 NTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAP 181 (377)
T ss_dssp STTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESC
T ss_pred CCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccc
Confidence 9999753221 11234444 5566777788889999999999999999999999999999988887664332
Q ss_pred CC---C---hhHHhhh-hhhhHHHHh----cCcchhHHHH-----------------HHHhhcccccccCCCCCCchHHH
Q 018916 156 AP---S---WTEWLYN-KVMSNLLYY----YGMCGVVKEL-----------------LLKRYFSKQEVRGNAQVPESDIV 207 (349)
Q Consensus 156 ~~---~---~~~~~~~-~~~~~~~~~----~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~ 207 (349)
.. . ....... ......... .......... ........... ..+....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 256 (377)
T d1k8qa_ 182 VATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTM-----NLNMSRL 256 (377)
T ss_dssp CSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGG-----GSCGGGH
T ss_pred cccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcc-----cccHHHh
Confidence 11 0 0000000 000000000 0000000000 00000000000 0011111
Q ss_pred HHHHHhhhhc-cchh--------------------HHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHH
Q 018916 208 QACRRLLDER-QSSN--------------------VWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 264 (349)
Q Consensus 208 ~~~~~~~~~~-~~~~--------------------~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~ 264 (349)
..+....... .... .................+.++++|+|+|+|++|.++ +..+.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~ 336 (377)
T d1k8qa_ 257 DVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLL 336 (377)
T ss_dssp HHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred hhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHH
Confidence 1111100000 0001 111111112222334467889999999999999998 5667788
Q ss_pred HHhcccceeEEEEcCCCCcccc---cChhhHHHHHHHHHhh
Q 018916 265 SKIDRRYSALVEVQACGSMVTE---EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 265 ~~~~~~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 302 (349)
+.+++ ..+.++++++||+.++ +.+++|...|.+||++
T Consensus 337 ~~lp~-~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 337 SKLPN-LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TTCTT-EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHCCC-CeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 88887 2478899999997443 5689999999999975
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=2e-28 Score=216.28 Aligned_cols=268 Identities=9% Similarity=0.016 Sum_probs=168.1
Q ss_pred eeEEeCCCeeEEEEEc--cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCC------eEEEEECCCCCCCCCCCC
Q 018916 22 DNLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN------FCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~--g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g------~~vi~~D~~G~G~s~~~~ 93 (349)
...++++|.+|||... +++++++|||+||++++... |..++..+.++| |+||++|+||||.|+.+.
T Consensus 84 ~f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~------w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~ 157 (394)
T d1qo7a_ 84 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVE------FYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP 157 (394)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGG------GHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCC
T ss_pred CeEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHH------HHHHHHhhccccCCcccceeeecccccccCCCCCCC
Confidence 3446779999999654 34677899999999999866 555555555555 999999999999998642
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCCh---------hHHhh
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW---------TEWLY 164 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------~~~~~ 164 (349)
....+++.++++++..+++.++.++++++|||+||.++..++..+|+.+.+++++......... .....
T Consensus 158 --~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T d1qo7a_ 158 --LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEG 235 (394)
T ss_dssp --SSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHH
T ss_pred --CCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHH
Confidence 3446899999999999999999999999999999999999999999999999988866543210 00000
Q ss_pred hhhhhHHHHhcCc-------------------chhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHH-H
Q 018916 165 NKVMSNLLYYYGM-------------------CGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVW-H 224 (349)
Q Consensus 165 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 224 (349)
............. ...........+... ........++.+.+............. .
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (394)
T d1qo7a_ 236 IARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQW----VDKPLPSETILEMVSLYWLTESFPRAIHT 311 (394)
T ss_dssp HHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHS----CSSCCCHHHHHHHHHHHHHTTCHHHHGGG
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhc----ccccCCHHHHHHHHHHHhhccccchhHHH
Confidence 0000000000000 000000000001000 000011222333222222111111111 1
Q ss_pred HHHHhcC-----CCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHH
Q 018916 225 FLEAING-----RPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYF 299 (349)
Q Consensus 225 ~~~~~~~-----~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 299 (349)
+...... .........+|++|+++++|++|.... .+.+.+.+.+ ..++.++++|||++++|+|+++++.|.+|
T Consensus 312 y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~-p~~~~~~~~~-~~~~~~~~~~GHf~~~E~Pe~~a~~I~~F 389 (394)
T d1qo7a_ 312 YRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPV-PRSWIATTGN-LVFFRDHAEGGHFAALERPRELKTDLTAF 389 (394)
T ss_dssp HHHHCC---------CTTTTTCEEEEEEEEECTBSSSCC-CHHHHGGGEE-EEEEEECSSCBSCHHHHCHHHHHHHHHHH
T ss_pred HHHHhhcccccchhhhhccCCcccCCeEEEEeCCCcccc-HHHHHHhccC-ceEEEEcCCcCCchHHhCHHHHHHHHHHH
Confidence 1111110 011223345788999999999997652 2345566665 35678899999999999999999999999
Q ss_pred Hhhc
Q 018916 300 LMGY 303 (349)
Q Consensus 300 l~~~ 303 (349)
++++
T Consensus 390 l~~v 393 (394)
T d1qo7a_ 390 VEQV 393 (394)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9975
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=2e-28 Score=200.21 Aligned_cols=226 Identities=12% Similarity=0.108 Sum_probs=145.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHcC
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA---EVLNHFG 117 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~---~~l~~l~ 117 (349)
++++|||+||++++... |...+..+.++||+|+++|+||||.|..+. ......+..+++. ..++..+
T Consensus 10 ~~~~vvliHG~~~~~~~------~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 79 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSAD------VRMLGRFLESKGYTCHAPIYKGHGVPPEEL----VHTGPDDWWQDVMNGYEFLKNKG 79 (242)
T ss_dssp SSCEEEEECCTTCCTHH------HHHHHHHHHHTTCEEEECCCTTSSSCHHHH----TTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCHHH------HHHHHHHHHHCCCEEEEEeCCCCccccccc----cccchhHHHHHHHHHHhhhhhcc
Confidence 56789999999988755 434555666789999999999999876322 2244455444443 3446677
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccC
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRG 197 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
.++++++|||+||.+++.++.++|.. .++++++.............. .... . ...... ..
T Consensus 80 ~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~---------~-~~~~~~-~~----- 139 (242)
T d1tqha_ 80 YEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKSEETMYEGV--LEYA---------R-EYKKRE-GK----- 139 (242)
T ss_dssp CCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSCCCHHHHHHHH--HHHH---------H-HHHHHH-TC-----
T ss_pred cCceEEEEcchHHHHhhhhcccCccc--ccccccccccccchhHHHHHH--HHHH---------H-HHhhhc-cc-----
Confidence 89999999999999999999998854 456666665554432221100 0000 0 000000 00
Q ss_pred CCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEE
Q 018916 198 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV 275 (349)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~ 275 (349)
........................... ......+..+++|+|+++|++|.++ +..+.+.+.+.+++++++
T Consensus 140 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 211 (242)
T d1tqha_ 140 -----SEEQIEQEMEKFKQTPMKTLKALQELI---ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIK 211 (242)
T ss_dssp -----CHHHHHHHHHHHTTSCCTTHHHHHHHH---HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEE
T ss_pred -----hhhhHHHHHhhhhhhccchhhcccccc---cccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEE
Confidence 111111111111111111111111100 1123456788999999999999998 667788898877679999
Q ss_pred EEcCCCCccccc-ChhhHHHHHHHHHhhcc
Q 018916 276 EVQACGSMVTEE-QPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 276 ~i~~~gH~~~~e-~p~~~~~~i~~fl~~~~ 304 (349)
+++++||+++.+ +++++++.|.+||+++.
T Consensus 212 ~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l~ 241 (242)
T d1tqha_ 212 WYEQSGHVITLDQEKDQLHEDIYAFLESLD 241 (242)
T ss_dssp EETTCCSSGGGSTTHHHHHHHHHHHHHHSC
T ss_pred EECCCCCcCccccCHHHHHHHHHHHHHhCC
Confidence 999999999986 58999999999999874
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2e-28 Score=203.75 Aligned_cols=102 Identities=9% Similarity=-0.017 Sum_probs=86.3
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 119 (349)
.+|||||||+++++.. |...+..+.+ .+|+|+++|+||||.|..+ ..++++++++++.++++.++ +
T Consensus 2 ~~PvvllHG~~~~~~~------~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~-----~~~~~~~~~~~l~~~l~~l~-~ 69 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYS------FRHLLEYINETHPGTVVTVLDLFDGRESLRP-----LWEQVQGFREAVVPIMAKAP-Q 69 (268)
T ss_dssp CCCEEEECCTTCCGGG------GHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-----HHHHHHHHHHHHHHHHHHCT-T
T ss_pred CCCEEEECCCCCCHHH------HHHHHHHHHhhCCCeEEEEeCCCCCCCCCCc-----cccCHHHHHHHHHHHHhccC-C
Confidence 5679999999988865 4344344433 3899999999999998743 24789999999999999999 9
Q ss_pred cEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCCC
Q 018916 120 AVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (349)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 155 (349)
+++|+||||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 70 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 70 GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred eEEEEccccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999999999999998 6999999998654
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.94 E-value=1.9e-25 Score=189.56 Aligned_cols=230 Identities=10% Similarity=0.060 Sum_probs=141.4
Q ss_pred ceeEEeC-CCeeEEEEEccC-----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCC-CCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~-G~s~~~~ 93 (349)
..|.+.+ +|..++++.+-+ ..+++|||+||++.+... |...+..+.++||+|+++|+||| |.|+.
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~------~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g-- 76 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH------FAGLAEYLSTNGFHVFRYDSLHHVGLSSG-- 76 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGG------GHHHHHHHHTTTCCEEEECCCBCC-------
T ss_pred eeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHH------HHHHHHHHHHCCCEEEEecCCCCCCCCCC--
Confidence 5677777 555788887643 345789999999877643 34556777888999999999998 77763
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
....+++.++.+|+.++++.+ +.++++++||||||.+++.+|.. ..++++|+.++...........
T Consensus 77 --~~~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~~------- 145 (302)
T d1thta_ 77 --SIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEKA------- 145 (302)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHHH-------
T ss_pred --cccCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHHH-------
Confidence 234578888888887766554 67899999999999999988864 4589999988775532111100
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
+ ....... ..... .. .... .........+............ ....+.+.++++|+|+++
T Consensus 146 -~-~~~~~~~----~~~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~PvLii~ 204 (302)
T d1thta_ 146 -L-GFDYLSL----PIDEL-PN-DLDF---EGHKLGSEVFVRDCFEHHWDTL----------DSTLDKVANTSVPLIAFT 204 (302)
T ss_dssp -H-SSCGGGS----CGGGC-CS-EEEE---TTEEEEHHHHHHHHHHTTCSSH----------HHHHHHHTTCCSCEEEEE
T ss_pred -H-hhccchh----hhhhc-cc-cccc---cccchhhHHHHHHHHHhHHHHH----------HHHHHHHhhcCCCEEEEE
Confidence 0 0000000 00000 00 0000 0000001111111110000000 012345678999999999
Q ss_pred eCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhh
Q 018916 251 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 291 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~ 291 (349)
|++|.++ +.++++.+.+++.+++++.++|++|.+. |+++.
T Consensus 205 G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~ 246 (302)
T d1thta_ 205 ANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV 246 (302)
T ss_dssp ETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH
T ss_pred eCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChHH
Confidence 9999999 6778899988876799999999999865 55543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=7e-24 Score=184.14 Aligned_cols=235 Identities=12% Similarity=0.063 Sum_probs=159.6
Q ss_pred CCCCCCceeEEeCCCeeEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC
Q 018916 15 TPPPSGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 15 ~~~~~~~~~~i~~~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
......++..|..+|..+..+.+.+ +..|+||++||+.++... |......+.++||.|+++|+||||.|..
T Consensus 101 ~~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~------~~~~~~~l~~~G~~vl~~D~~G~G~s~~ 174 (360)
T d2jbwa1 101 LLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE------SFQMENLVLDRGMATATFDGPGQGEMFE 174 (360)
T ss_dssp GSSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTT------THHHHHHHHHTTCEEEEECCTTSGGGTT
T ss_pred hCCCCeEEeecCcCCcccceEEEecCCCCCceEEEEeCCCCccHHH------HHHHHHHHHhcCCEEEEEccccccccCc
Confidence 3445567888888999998776644 345799999999776533 2234457788999999999999998864
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh
Q 018916 92 AISDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
.. ......+..+..+.+++... +.++|.++||||||.+|+.+|...| +|+++|.+++..........
T Consensus 175 ~~---~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~------ 244 (360)
T d2jbwa1 175 YK---RIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLE------ 244 (360)
T ss_dssp TC---CSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGS------
T ss_pred cc---cccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhh------
Confidence 22 22345677777777777654 3468999999999999999999887 59999999887654321100
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 248 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 248 (349)
...... ........ .. ..+.... .... .+....+.+|+||+|+
T Consensus 245 ---------~~~~~~-~~~~~~~~-~~-------~~~~~~~---------------~~~~----~~~~~~~~~i~~P~Li 287 (360)
T d2jbwa1 245 ---------TPLTKE-SWKYVSKV-DT-------LEEARLH---------------VHAA----LETRDVLSQIACPTYI 287 (360)
T ss_dssp ---------CHHHHH-HHHHHTTC-SS-------HHHHHHH---------------HHHH----TCCTTTGGGCCSCEEE
T ss_pred ---------hhhhhH-HHHHhccC-Cc-------hHHHHHH---------------HHhh----cchhhhHhhCCCCEEE
Confidence 000000 00111111 00 0100000 0011 2344567889999999
Q ss_pred EEeCCCccc-hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 249 FVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 249 i~g~~D~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
++|++|.+. +..+.+.+.+++.+.+++++++++|.. ..++.+....|.+||++.
T Consensus 288 i~G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~ 342 (360)
T d2jbwa1 288 LHGVHDEVPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDV 342 (360)
T ss_dssp EEETTSSSCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHH
T ss_pred EEeCCCCcCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHH
Confidence 999999864 677889999987668888999999964 467778888889999876
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.91 E-value=5.1e-22 Score=170.46 Aligned_cols=265 Identities=15% Similarity=0.183 Sum_probs=170.0
Q ss_pred eEEEEEccC---CCCCeEEEecCCCCChhhhhcccccchhhh---hhhcCCeEEEEECCCCCCCCCC-CCC---------
Q 018916 31 SLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEAC---SLLLHNFCIYHINPPGHEFGAA-AIS--------- 94 (349)
Q Consensus 31 ~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~l~~g~~vi~~D~~G~G~s~~-~~~--------- 94 (349)
+|.|+.+|. ...++||++|++.+++... -+|...+- .+=...|.||++|..|.|.+.. +.+
T Consensus 30 ~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~---~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~ 106 (376)
T d2vata1 30 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVT---SWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQR 106 (376)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGG---GTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--C
T ss_pred eEEEEeecccCCCCCCEEEEcCCCcCCcccc---ccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCC
Confidence 689999996 2457899999998776432 23533221 2224699999999999886532 111
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHcCCCcE-EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 95 ---DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 95 ---~~~~~~~~~~~~~~l~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
...+.+++.|+++....++++||++++ .++|.||||++|+++|..||++|+++|.+++......+..... .....
T Consensus 107 ~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~-~~~~~ 185 (376)
T d2vata1 107 PYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWF-ETQRQ 185 (376)
T ss_dssp BCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHH-HHHHH
T ss_pred cccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHH-HHHHH
Confidence 123467999999999999999999997 5889999999999999999999999999998887643322111 11111
Q ss_pred HHHh------------------------cCcchhH-HHHHHHhhcccccccCCCCC----------------------Cc
Q 018916 171 LLYY------------------------YGMCGVV-KELLLKRYFSKQEVRGNAQV----------------------PE 203 (349)
Q Consensus 171 ~~~~------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------------------~~ 203 (349)
.+.. ..+..+. ++.+-.+|... ........ ..
T Consensus 186 ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~-~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
T d2vata1 186 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMA-PGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 264 (376)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCC-CCCC---------------------------C
T ss_pred HhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhc-cccccccccccchhhhcccccccccccccccc
Confidence 1100 0000000 01111111110 00000000 00
Q ss_pred hHHHHHHHH-----hhhhccchhHHHHHHHhcCC-------CChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcc
Q 018916 204 SDIVQACRR-----LLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 269 (349)
Q Consensus 204 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~ 269 (349)
...++.+.. .....+...+....+.+... .++.+.+++|++|+|+|.++.|.++ +..+++++.+++
T Consensus 265 ~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~ 344 (376)
T d2vata1 265 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN 344 (376)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTT
T ss_pred hhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCC
Confidence 011222221 11222344455444444321 2456679999999999999999988 567778899987
Q ss_pred cceeEEEEc-CCCCcccccChhhHHHHHHHHHhh
Q 018916 270 RYSALVEVQ-ACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 270 ~~~~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+++.+|+ ..||..++.+++.+.+.|.+||++
T Consensus 345 --a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 345 --SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp --EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred --CeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9999998 689998888899999999999975
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.90 E-value=8.5e-22 Score=167.89 Aligned_cols=273 Identities=15% Similarity=0.181 Sum_probs=172.9
Q ss_pred CeeEEEEEccCC---CCCeEEEecCCCCChhhhh---cccccchhhh---hhhcCCeEEEEECCCCCCCCCCC-CC----
Q 018916 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF---QGLFFCPEAC---SLLLHNFCIYHINPPGHEFGAAA-IS---- 94 (349)
Q Consensus 29 ~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~---~~~~~~~~~~---~~l~~g~~vi~~D~~G~G~s~~~-~~---- 94 (349)
+.++.|+.+|.. ..++||++|++.+++.... ..-+|...+- .+=...|.||++|..|.|.|..+ .+
T Consensus 23 ~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~ 102 (357)
T d2b61a1 23 YINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQ 102 (357)
T ss_dssp SEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTT
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCC
Confidence 457899999952 3479999999988865421 1123533221 22235799999999998765432 11
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHHcCCCcE-EEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh
Q 018916 95 ------DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 95 ------~~~~~~~~~~~~~~l~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
.+.+..++.|+++....++++||++++ .++|.||||++|+++|.+||+.|+++|.+++........... ...
T Consensus 103 tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~-~~~ 181 (357)
T d2b61a1 103 TGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGF-NHV 181 (357)
T ss_dssp TSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHH-HHH
T ss_pred CCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHH-HHH
Confidence 123468999999999999999999998 577999999999999999999999999999887654322211 111
Q ss_pred hhHHHHh------------------------cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHh-----hhhcc
Q 018916 168 MSNLLYY------------------------YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRL-----LDERQ 218 (349)
Q Consensus 168 ~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 218 (349)
....+.. ..+..+.........|.................+.+... ....+
T Consensus 182 ~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfD 261 (357)
T d2b61a1 182 MRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFD 261 (357)
T ss_dssp HHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCC
Confidence 1111110 000000001111122222011100000011112333322 12234
Q ss_pred chhHHHHHHHhc------CCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcC-CCCccccc
Q 018916 219 SSNVWHFLEAIN------GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQA-CGSMVTEE 287 (349)
Q Consensus 219 ~~~~~~~~~~~~------~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~-~gH~~~~e 287 (349)
...+....+.+. .+.++.+.+++|++|+|+|..+.|.++ +..+++.+.+++. ++++++|+. .||..++.
T Consensus 262 an~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~ 341 (357)
T d2b61a1 262 ANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLV 341 (357)
T ss_dssp HHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHH
T ss_pred HHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCc
Confidence 445555544442 234667789999999999999999998 4566777877653 368888986 59999998
Q ss_pred ChhhHHHHHHHHHhh
Q 018916 288 QPHAMLIPMEYFLMG 302 (349)
Q Consensus 288 ~p~~~~~~i~~fl~~ 302 (349)
+.+++.+.|.+||..
T Consensus 342 e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 342 DYDQFEKRIRDGLAG 356 (357)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcc
Confidence 899999999999974
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.90 E-value=4.5e-22 Score=158.83 Aligned_cols=201 Identities=12% Similarity=0.070 Sum_probs=134.4
Q ss_pred CCceeEEeCCCeeEEEEEccC-----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 19 SGKDNLIKTSHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 19 ~~~~~~i~~~~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
..+...|+...|++.....-+ ...+++|++|+.+..+.+..... .......+.++||.|+.+|+||+|.|....
T Consensus 7 ~~~~l~i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~-~~~la~~l~~~G~~vlrfd~RG~G~S~g~~ 85 (218)
T d2fuka1 7 ESAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKV-VTMAARALRELGITVVRFNFRSVGTSAGSF 85 (218)
T ss_dssp SCEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHH-HHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred CceEEEEeCCCccEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChH-HHHHHHHHHHcCCeEEEeecCCCccCCCcc
Confidence 345556777778876655432 12236688896544332222111 223445667889999999999999987532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHH
Q 018916 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (349)
. ......+|+...+..+.+....++++++||||||.+++.+|.+. .++++|+++++...
T Consensus 86 ~--~~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~----------------- 144 (218)
T d2fuka1 86 D--HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR----------------- 144 (218)
T ss_dssp C--TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT-----------------
T ss_pred C--cCcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccc-----------------
Confidence 2 11122333333334444556678999999999999999888764 48899999875320
Q ss_pred hcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCC
Q 018916 174 YYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 253 (349)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 253 (349)
+ ++ ...++.+|+|+|+|++
T Consensus 145 ----------------~---~~------------------------------------------~~~~~~~P~Lvi~G~~ 163 (218)
T d2fuka1 145 ----------------W---DF------------------------------------------SDVQPPAQWLVIQGDA 163 (218)
T ss_dssp ----------------B---CC------------------------------------------TTCCCCSSEEEEEETT
T ss_pred ----------------h---hh------------------------------------------hccccccceeeEecCC
Confidence 0 00 0012357999999999
Q ss_pred Cccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 254 SPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 254 D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
|.++ +..+++.+.+.. ..++++++|++|+.. .+.+++.+.+.+|+++.-
T Consensus 164 D~~vp~~~~~~l~~~~~~-~~~l~~i~ga~H~f~-~~~~~l~~~~~~~v~~~l 214 (218)
T d2fuka1 164 DEIVDPQAVYDWLETLEQ-QPTLVRMPDTSHFFH-RKLIDLRGALQHGVRRWL 214 (218)
T ss_dssp CSSSCHHHHHHHHTTCSS-CCEEEEETTCCTTCT-TCHHHHHHHHHHHHGGGC
T ss_pred CcCcCHHHHHHHHHHccC-CceEEEeCCCCCCCC-CCHHHHHHHHHHHHHHhc
Confidence 9999 566667666654 478999999999754 555779999999999863
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.90 E-value=4.6e-23 Score=173.06 Aligned_cols=217 Identities=15% Similarity=0.136 Sum_probs=138.2
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHcCC
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE-VLNHFGL 118 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~-~l~~l~~ 118 (349)
..+|++||+||+...+..+ .| ..+...+..+++|+++|+||||.|+.... .....+++++++++.+ +++..+.
T Consensus 58 ~~~~~l~c~~~~~~~g~~~----~y-~~la~~L~~~~~V~al~~pG~~~~~~~~~-~~~~~s~~~~a~~~~~~i~~~~~~ 131 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPH----EF-LRLSTSFQEERDFLAVPLPGYGTGTGTGT-ALLPADLDTALDAQARAILRAAGD 131 (283)
T ss_dssp CCCCEEEEECCCCTTCSTT----TT-HHHHHTTTTTCCEEEECCTTCCBC---CB-CCEESSHHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEEeCCCCCCCCHH----HH-HHHHHhcCCCceEEEEeCCCCCCCCCCcc-ccccCCHHHHHHHHHHHHHHhcCC
Confidence 4678999999964333221 12 22356678899999999999998774322 2234699999998765 5577888
Q ss_pred CcEEEEEechhHHHHHHHHHhhh----cccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccccc
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYR----HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQE 194 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (349)
.+++|+||||||.||+++|.+.+ +.|.+++++++................. .......+..
T Consensus 132 ~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~-- 196 (283)
T d2h7xa1 132 APVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLG-------------EGLFAGELEP-- 196 (283)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHH-------------HHHHHTCSSC--
T ss_pred CceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhH-------------HHhhcccccc--
Confidence 99999999999999999998765 4699999999877654332211111100 0011111111
Q ss_pred ccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccce
Q 018916 195 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS 272 (349)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~ 272 (349)
. ....+... ....+.+.. .....+++|+++++|++|..+ .....+.+.+++ ..
T Consensus 197 ------~-~~~~l~a~------------~~~~~~~~~-----~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~-~~ 251 (283)
T d2h7xa1 197 ------M-SDARLLAM------------GRYARFLAG-----PRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDL-PH 251 (283)
T ss_dssp ------C-CHHHHHHH------------HHHHHHHHS-----CCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSS-CS
T ss_pred ------c-ccHHHHHH------------HHHHHHHhh-----ccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCC-Cc
Confidence 0 11111111 111122211 123568999999999999887 333334444443 36
Q ss_pred eEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 273 ALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 273 ~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
+++.++ ++|+.++ ++++++++.|.+||+++
T Consensus 252 ~~~~v~-G~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 252 TVADVP-GDHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp EEEEES-SCTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred EEEEEc-CCCcccccCCHHHHHHHHHHHHHhc
Confidence 888897 5898665 77999999999999875
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=4.8e-23 Score=172.31 Aligned_cols=109 Identities=14% Similarity=0.037 Sum_probs=80.9
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 103 (349)
.+..+|..+.+...+++++++|||+||+++++.. |...+ ..+ +++|+++|+||+|.|+ +++
T Consensus 7 ~~~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~------~~~l~-~~L--~~~v~~~d~~g~~~~~----------~~~ 67 (286)
T d1xkta_ 7 LVNPEGPTLMRLNSVQSSERPLFLVHPIEGSTTV------FHSLA-SRL--SIPTYGLQCTRAAPLD----------SIH 67 (286)
T ss_dssp CCCTTSCSEEECCCCCCCSCCEEEECCTTCCCGG------GHHHH-HTC--SSCEEEECCCTTSCCS----------CHH
T ss_pred hcCCCCCEEEEecCCCCCCCeEEEECCCCccHHH------HHHHH-HHc--CCeEEEEeCCCCCCCC----------CHH
Confidence 3445666677766677778889999999999755 43333 333 6899999999998753 678
Q ss_pred HHHHHHHH-HHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEec
Q 018916 104 DLADQIAE-VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVS 151 (349)
Q Consensus 104 ~~~~~l~~-~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 151 (349)
+++++..+ +++..+.++++|+||||||.+|+.+|.++|+++.++++++
T Consensus 68 ~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 68 SLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred HHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 88887765 4566778999999999999999999999999988877665
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.88 E-value=1e-22 Score=145.82 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=87.5
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+.-+++.+|.+++|...| ++|+|||+||.+ .. | .+.+.++|+||++|+||||.|+. ..+
T Consensus 2 r~~~~~~~G~~l~y~~~G--~G~pvlllHG~~---~~------w----~~~L~~~yrvi~~DlpG~G~S~~------p~~ 60 (122)
T d2dsta1 2 RAGYLHLYGLNLVFDRVG--KGPPVLLVAEEA---SR------W----PEALPEGYAFYLLDLPGYGRTEG------PRM 60 (122)
T ss_dssp EEEEEEETTEEEEEEEEC--CSSEEEEESSSG---GG------C----CSCCCTTSEEEEECCTTSTTCCC------CCC
T ss_pred CceEEEECCEEEEEEEEc--CCCcEEEEeccc---cc------c----cccccCCeEEEEEeccccCCCCC------ccc
Confidence 356899999999999999 789999999842 22 4 35578899999999999999863 248
Q ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhc
Q 018916 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (349)
+.+++++++.++++++++++++++||||||.+++.+++..+.
T Consensus 61 s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 61 APEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp CHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999986543
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.88 E-value=2.9e-21 Score=164.88 Aligned_cols=272 Identities=13% Similarity=0.150 Sum_probs=166.7
Q ss_pred CeeEEEEEccCC---CCCeEEEecCCCCChhhh-------hcccccchhhh---hhhcCCeEEEEECCCCCCCCCCCC-C
Q 018916 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSC-------FQGLFFCPEAC---SLLLHNFCIYHINPPGHEFGAAAI-S 94 (349)
Q Consensus 29 ~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~-------~~~~~~~~~~~---~~l~~g~~vi~~D~~G~G~s~~~~-~ 94 (349)
+.++.|+.+|.. ..++||++|++.+++... ...-+|...+- .+=.+.|.||++|..|.|.|.++- .
T Consensus 26 ~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s 105 (362)
T d2pl5a1 26 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLS 105 (362)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTS
T ss_pred CceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccc
Confidence 347899999953 347999999998875221 11223422211 222458999999999998765421 1
Q ss_pred ----------CCCCCCCHHHHHHHHHHHHHHcCCCcEE-EEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHh
Q 018916 95 ----------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (349)
Q Consensus 95 ----------~~~~~~~~~~~~~~l~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (349)
......++.|+++....++++||++++. ++|.||||+.|+++|.+||+.|+++|.+++...........
T Consensus 106 ~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~ 185 (362)
T d2pl5a1 106 IHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 185 (362)
T ss_dssp BCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred cccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHH
Confidence 1133578999999999999999999987 78999999999999999999999999999887664322211
Q ss_pred hhhhhhHHHHh------c-----------------CcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHh-----hh
Q 018916 164 YNKVMSNLLYY------Y-----------------GMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRL-----LD 215 (349)
Q Consensus 164 ~~~~~~~~~~~------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 215 (349)
.......+.. . .+..+.........|.. ..............+.+... ..
T Consensus 186 -~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~-~~~~~~~~~~~~~ve~yl~~~g~k~~~ 263 (362)
T d2pl5a1 186 -NEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGR-NPPRGNILSTDFAVGSYLIYQGESFVD 263 (362)
T ss_dssp -HHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTT-SCCSSCTTTTTTTSCGGGGSTTCCSSS
T ss_pred -HHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhcc-ccccccccchhHHHHHHHHHHHHHHHh
Confidence 1111111111 0 00000000111111111 00000000000000111110 11
Q ss_pred hccchhHHHHHHHhcC-----CCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccc--eeEEEEc-CCCCccc
Q 018916 216 ERQSSNVWHFLEAING-----RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQ-ACGSMVT 285 (349)
Q Consensus 216 ~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~--~~~~~i~-~~gH~~~ 285 (349)
..+...+....+.+.. ..++.+.+++|++|+|+|..+.|.++ +..+++.+.+++.+ +++++|+ ..||..+
T Consensus 264 rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaF 343 (362)
T d2pl5a1 264 RFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSF 343 (362)
T ss_dssp CCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG
T ss_pred cCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchh
Confidence 1122333333333322 11234568999999999999999999 56777888888643 5777775 4899999
Q ss_pred ccChhhHHHHHHHHHhh
Q 018916 286 EEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 286 ~e~p~~~~~~i~~fl~~ 302 (349)
+.+.+++.+.|.+||+.
T Consensus 344 L~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 344 LLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GSCCHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHcC
Confidence 99999999999999973
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.2e-21 Score=154.07 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=119.3
Q ss_pred CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEE
Q 018916 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVM 122 (349)
Q Consensus 43 p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~ 122 (349)
..|||+||++++....+ +......+.++||.|+++|+||+|.+ .++++++.+.+..+..+ ++++
T Consensus 2 k~V~~vHG~~~~~~~~~----~~~l~~~L~~~G~~v~~~d~p~~~~~-----------~~~~~~~~l~~~~~~~~-~~~~ 65 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHW----FPWLKKRLLADGVQADILNMPNPLQP-----------RLEDWLDTLSLYQHTLH-ENTY 65 (186)
T ss_dssp CEEEEECCTTCCTTSTT----HHHHHHHHHHTTCEEEEECCSCTTSC-----------CHHHHHHHHHTTGGGCC-TTEE
T ss_pred CEEEEECCCCCCcchhH----HHHHHHHHHhCCCEEEEeccCCCCcc-----------hHHHHHHHHHHHHhccC-CCcE
Confidence 46999999988754311 11233566678999999999999752 46777777777666544 7899
Q ss_pred EEEechhHHHHHHHHHhhhcccc--eeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCC
Q 018916 123 CMGVTAGAYILTLFAMKYRHRVL--GLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQ 200 (349)
Q Consensus 123 lvGhS~Gg~ia~~~a~~~p~~v~--~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
++||||||.+++.++.++|+... +++...+........ . ....+...
T Consensus 66 lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~--~---------------------~~~~~~~~-------- 114 (186)
T d1uxoa_ 66 LVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL--Q---------------------MLDEFTQG-------- 114 (186)
T ss_dssp EEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC--G---------------------GGGGGTCS--------
T ss_pred EEEechhhHHHHHHHHhCCccceeeEEeecccccccchhh--h---------------------hhhhhhcc--------
Confidence 99999999999999999987544 444443332211100 0 00000000
Q ss_pred CCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEc
Q 018916 201 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQ 278 (349)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~ 278 (349)
........++.+|+++|+|++|+++ ...+.+.+.+. +++++++
T Consensus 115 --------------------------------~~~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~---~~~~~~~ 159 (186)
T d1uxoa_ 115 --------------------------------SFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID---AALYEVQ 159 (186)
T ss_dssp --------------------------------CCCHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHTT---CEEEEET
T ss_pred --------------------------------cccccccccCCCCEEEEecCCCCCCCHHHHHHHHHHcC---CEEEEeC
Confidence 0000111234579999999999999 55677888773 7899999
Q ss_pred CCCCccccc---ChhhHHHHHHHHHhh
Q 018916 279 ACGSMVTEE---QPHAMLIPMEYFLMG 302 (349)
Q Consensus 279 ~~gH~~~~e---~p~~~~~~i~~fl~~ 302 (349)
++||+...+ .-.++.+.|.+||.+
T Consensus 160 ~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 160 HGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp TCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCCCcCccccCcccHHHHHHHHHHHcC
Confidence 999977654 234788889999864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=3.4e-22 Score=162.58 Aligned_cols=212 Identities=11% Similarity=-0.033 Sum_probs=123.1
Q ss_pred ccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Q 018916 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (349)
Q Consensus 37 ~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l 116 (349)
.+.+.+++|||+||++++... |..+ ...+ .+|.|+++|++|+|. ..+++++++. +..
T Consensus 12 ~~~~~~~~l~~lhg~~g~~~~------~~~l-a~~L-~~~~v~~~~~~g~~~------------~a~~~~~~i~---~~~ 68 (230)
T d1jmkc_ 12 MNQDQEQIIFAFPPVLGYGLM------YQNL-SSRL-PSYKLCAFDFIEEED------------RLDRYADLIQ---KLQ 68 (230)
T ss_dssp ESTTCSEEEEEECCTTCCGGG------GHHH-HHHC-TTEEEEEECCCCSTT------------HHHHHHHHHH---HHC
T ss_pred ecCCCCCeEEEEcCCCCCHHH------HHHH-HHHC-CCCEEeccCcCCHHH------------HHHHHHHHHH---HhC
Confidence 334477899999999999855 4333 3444 479999999999853 2234443332 334
Q ss_pred CCCcEEEEEechhHHHHHHHHHhhhccccee---EEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccc
Q 018916 117 GLGAVMCMGVTAGAYILTLFAMKYRHRVLGL---ILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQ 193 (349)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l---vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (349)
+.++++|+||||||.+|+.+|.++|+++..+ +.+++............ ..... ...........
T Consensus 69 ~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~- 135 (230)
T d1jmkc_ 69 PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR-----------TVESD-VEALMNVNRDN- 135 (230)
T ss_dssp CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC-------------------CC-HHHHHHHTTTC-
T ss_pred CCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhh-----------hhhhh-hhhhhhccccc-
Confidence 5688999999999999999999988765444 44444332211100000 00000 00111111111
Q ss_pred cccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-hhHHHHHHHhcccce
Q 018916 194 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYS 272 (349)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~~~~~~~~ 272 (349)
... ..+.....+.... ....... ........+++|+++|+|++|..+ +....+.+...+ +.
T Consensus 136 ~~~-----~~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~i~~p~l~i~g~~D~~~~~~~~~w~~~~~~-~~ 197 (230)
T d1jmkc_ 136 EAL-----NSEAVKHGLKQKT--------HAFYSYY----VNLISTGQVKADIDLLTSGADFDIPEWLASWEEATTG-AY 197 (230)
T ss_dssp SGG-----GSHHHHHHHHHHH--------HHHHHHH----HHCCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBSS-CE
T ss_pred ccc-----ccHHHHHHHHHHH--------HHHHHhh----hcccccccccCcceeeeecCCcccchhHHHHHHhccC-Cc
Confidence 100 0222222222211 1111111 112234578999999999999987 332223333332 47
Q ss_pred eEEEEcCCCCcccccCh--hhHHHHHHHHHhhc
Q 018916 273 ALVEVQACGSMVTEEQP--HAMLIPMEYFLMGY 303 (349)
Q Consensus 273 ~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~ 303 (349)
+++.++ +||+.++++| +++++.|.+||++.
T Consensus 198 ~~~~i~-g~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 198 RMKRGF-GTHAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp EEEECS-SCGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred EEEEEc-CCChhhcCCccHHHHHHHHHHHHhhc
Confidence 888887 6999999766 89999999999864
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=4e-20 Score=151.11 Aligned_cols=217 Identities=12% Similarity=0.029 Sum_probs=128.6
Q ss_pred ceeEEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
+...++..|..+.+...+ +.+|+||++||++++...+. ..+..+.++||.|+++|+||||.|..+........
T Consensus 4 ~~~~~~l~g~~~~~~~p~-~~~~~vl~lHG~~~~~~~~~------~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~ 76 (238)
T d1ufoa_ 4 RTERLTLAGLSVLARIPE-APKALLLALHGLQGSKEHIL------ALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76 (238)
T ss_dssp EEEEEEETTEEEEEEEES-SCCEEEEEECCTTCCHHHHH------HTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTT
T ss_pred EEEEEEECCEEEEecCCC-CCCeEEEEeCCCCCCHHHHH------HHHHHHHHCCCEEEEecCCCCCCCcccccccccch
Confidence 444566677666655544 35789999999998875532 33356778899999999999998875443332222
Q ss_pred CHHHHHHH-------HHHHHH---HcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhH
Q 018916 101 SVDDLADQ-------IAEVLN---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (349)
Q Consensus 101 ~~~~~~~~-------l~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (349)
..++.... +..++. .....++.++|||+||.+++.++..+|+....+.++.+....... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~-~--------- 146 (238)
T d1ufoa_ 77 YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP-Q--------- 146 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC-T---------
T ss_pred hhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeeccccccc-c---------
Confidence 22322222 222221 223478999999999999999999998644444343332221110 0
Q ss_pred HHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEE
Q 018916 171 LLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 250 (349)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 250 (349)
.... ........... ..........++|+|+++
T Consensus 147 ------------------~~~~---------~~~~~~~~~~~--------------------~~~~~~~~~~~~P~li~~ 179 (238)
T d1ufoa_ 147 ------------------GQVV---------EDPGVLALYQA--------------------PPATRGEAYGGVPLLHLH 179 (238)
T ss_dssp ------------------TCCC---------CCHHHHHHHHS--------------------CGGGCGGGGTTCCEEEEE
T ss_pred ------------------cccc---------ccccccchhhh--------------------hhhhhhhhhcCCCeEEEE
Confidence 0000 01111100000 111111233468999999
Q ss_pred eCCCccc--hhHHHHHHHhccc----ceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 251 GESSPFH--SEAVHMTSKIDRR----YSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 251 g~~D~~~--~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
|++|.++ .....+.+.+... +.+++.++|+||...-+.-++..+.+.+||+
T Consensus 180 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 180 GSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp ETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 9999998 5666777776432 3678889999998764433444444555554
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=2.1e-21 Score=151.47 Aligned_cols=173 Identities=10% Similarity=0.043 Sum_probs=131.0
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcE
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v 121 (349)
.+||||+||++++... |......+.++||.|+.+|.+|+|.+.. ....+.+++++++.+++++++.+++
T Consensus 2 ~~PVv~vHG~~~~~~~------~~~l~~~l~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~i~~~~~~~~~~~v 70 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFN------FAGIKSYLVSQGWSRDKLYAVDFWDKTG-----TNYNNGPVLSRFVQKVLDETGAKKV 70 (179)
T ss_dssp CCCEEEECCTTCCGGG------GHHHHHHHHHTTCCGGGEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCEEEECCCCCCHHH------HHHHHHHHHHcCCeEEEEecCCcccccc-----ccchhhhhHHHHHHHHHHhcCCceE
Confidence 5679999999988755 4455567778899999999999987652 1235677888899999999999999
Q ss_pred EEEEechhHHHHHHHHHhh--hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCC
Q 018916 122 MCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNA 199 (349)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
+++||||||.++..++.++ |++|+++|+++++...... . .+.
T Consensus 71 ~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~--------------------------------~-~l~--- 114 (179)
T d1ispa_ 71 DIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG--------------------------------K-ALP--- 114 (179)
T ss_dssp EEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS--------------------------------B-CCC---
T ss_pred EEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchh--------------------------------h-hcC---
Confidence 9999999999999999876 6789999999875321100 0 000
Q ss_pred CCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeEEEEcC
Q 018916 200 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQA 279 (349)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (349)
. ......+|++.|+|+.|.+++... ..+++ .+.+.+++
T Consensus 115 ---~----------------------------------~~~~~~~~~~~i~~~~D~~v~~~~---~~l~~--~~~~~~~~ 152 (179)
T d1ispa_ 115 ---G----------------------------------TDPNQKILYTSIYSSADMIVMNYL---SRLDG--ARNVQIHG 152 (179)
T ss_dssp ---C----------------------------------SCTTCCCEEEEEEETTCSSSCHHH---HCCBT--SEEEEESS
T ss_pred ---C----------------------------------cccccCceEEEEEecCCcccCchh---hcCCC--ceEEEECC
Confidence 0 001225789999999999883321 24565 88889999
Q ss_pred CCCcccccChhhHHHHHHHHHhhcc
Q 018916 280 CGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 280 ~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
.+|.....+| ++.+.|.+||+.-+
T Consensus 153 ~~H~~l~~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 153 VGHIGLLYSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp CCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred CCchhhccCH-HHHHHHHHHHhccC
Confidence 9999888887 78899999998654
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=5.5e-20 Score=156.71 Aligned_cols=232 Identities=12% Similarity=0.059 Sum_probs=134.0
Q ss_pred ceeEEeC-CCeeEEEEEc---cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~---g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
++..+.+ +|..|+...+ +.+..|+||++||++++... |...+..+.++||.|+++|+||||.|..+....
T Consensus 57 ~~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~------~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~ 130 (318)
T d1l7aa_ 57 YRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG------EIHEMVNWALHGYATFGMLVRGQQRSEDTSISP 130 (318)
T ss_dssp EEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG------GHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCS
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccc------hHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccc
Confidence 3344554 4556765443 33455899999999887755 334456778899999999999999987532211
Q ss_pred C--------------CCCCHHHHHHHHHHHH---HHcC---CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 97 E--------------PVLSVDDLADQIAEVL---NHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 97 ~--------------~~~~~~~~~~~l~~~l---~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
. ..........+....+ .... ..++.++|+|+||..++..+...+. +.+++...+....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~ 209 (318)
T d1l7aa_ 131 HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN 209 (318)
T ss_dssp SCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC
T ss_pred hhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc
Confidence 0 0111223333333332 2222 2468999999999999998888765 6666665554332
Q ss_pred CChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChh
Q 018916 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDIS 236 (349)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (349)
..... ....... .......... . .............. ..+..
T Consensus 210 --~~~~~---------~~~~~~~-----------------------~~~~~~~~~~-~--~~~~~~~~~~~~~~-~~~~~ 251 (318)
T d1l7aa_ 210 --FERAI---------DVALEQP-----------------------YLEINSFFRR-N--GSPETEVQAMKTLS-YFDIM 251 (318)
T ss_dssp --HHHHH---------HHCCSTT-----------------------TTHHHHHHHH-S--CCHHHHHHHHHHHH-TTCHH
T ss_pred --HHHHh---------hcccccc-----------------------cchhhhhhhc-c--cccccccccccccc-ccccc
Confidence 11100 0000000 0000000000 0 00000001111111 13445
Q ss_pred hhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 237 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 237 ~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
..+.++++|+|+++|++|.++ +.+..+.++++. +.++++++++||....+ +.+.+.+||++
T Consensus 252 ~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~-~~~l~~~~~~gH~~~~~----~~~~~~~fl~~ 314 (318)
T d1l7aa_ 252 NLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEYIPA----FQTEKLAFFKQ 314 (318)
T ss_dssp HHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSCCHH----HHHHHHHHHHH
T ss_pred cccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCC-CcEEEEECCCCCCCcHH----HHHHHHHHHHH
Confidence 567789999999999999999 566778888864 58999999999976544 44455555554
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.85 E-value=8.9e-20 Score=151.16 Aligned_cols=231 Identities=10% Similarity=0.047 Sum_probs=144.0
Q ss_pred ceeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+..++.+ +|.++....+-+ ...|+||++||.+..... ..|......+.++||.|+++|+||+|.+......
T Consensus 13 ~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~----~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~ 88 (260)
T d2hu7a2 13 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDS----DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRL 88 (260)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCC----SSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHH
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCC----ccccHHHHHHHhhccccccceeeecccccccccc
Confidence 4445666 455776554433 234689999985433211 1133455667788999999999998765421110
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 96 ----DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 96 ----~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
......++|+.+.+..+.+.....++.++|+|+||.+++.++..+|+.+++++..++..... ...
T Consensus 89 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~---~~~-------- 157 (260)
T d2hu7a2 89 KIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWE---EMY-------- 157 (260)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHH---HHH--------
T ss_pred ccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhh---hhh--------
Confidence 01112244544444444454445789999999999999999999999999999888765421 100
Q ss_pred HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEe
Q 018916 172 LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 251 (349)
.. ...... ......... ..+. + .. .+....+.++++|+|+++|
T Consensus 158 --~~-~~~~~~-~~~~~~~~~----------~~~~---~----------------~~----~~~~~~~~~~~~P~liihG 200 (260)
T d2hu7a2 158 --EL-SDAAFR-NFIEQLTGG----------SREI---M----------------RS----RSPINHVDRIKEPLALIHP 200 (260)
T ss_dssp --HT-CCHHHH-HHHHHHHCS----------CHHH---H----------------HH----TCGGGCGGGCCSCEEEEEE
T ss_pred --cc-cccccc-ccccccccc----------cccc---c----------------cc----cchhhcccccCCCceeeec
Confidence 00 000000 000111000 1100 0 00 2334456788999999999
Q ss_pred CCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 252 ESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 252 ~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
++|.++ ..+..+.+.+.+. .+++++++++||.+.. ++..++.+.+.+||+++
T Consensus 201 ~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~h 257 (260)
T d2hu7a2 201 QNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 257 (260)
T ss_dssp TTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred ccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 999988 5677787777543 3789999999997644 67778888889999875
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.81 E-value=3e-19 Score=147.10 Aligned_cols=210 Identities=14% Similarity=0.083 Sum_probs=129.4
Q ss_pred CCCCeEEEecCCC-CChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHcC
Q 018916 40 QDKPALVTYPDLA-LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHFG 117 (349)
Q Consensus 40 ~~~p~vv~lHG~~-~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l-~~l~ 117 (349)
+++|+|||+||+. +.+..+|. .+...+...+.|+++|+||||.++. ...+++++++++.+.+ +..+
T Consensus 40 ~~~~~l~c~~~~~~gg~~~~y~------~La~~L~~~~~V~al~~pG~~~~e~------~~~s~~~~a~~~~~~i~~~~~ 107 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPHEFT------RLAGALRGIAPVRAVPQPGYEEGEP------LPSSMAAVAAVQADAVIRTQG 107 (255)
T ss_dssp SCSSEEEEECCCSSSCSGGGGH------HHHHHHTTTCCEEEECCTTSSTTCC------EESSHHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEEECCCCCCCCHHHHH------HHHHhcCCCceEEEEeCCCcCCCCC------CCCCHHHHHHHHHHHHHHhCC
Confidence 4788999999853 22222222 2256677789999999999987652 2368999999987666 5566
Q ss_pred CCcEEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhccccc
Q 018916 118 LGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQE 194 (349)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (349)
..+++|+||||||.+|+++|.+.++ .|.+++++++......... ..... ......+.. .
T Consensus 108 ~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~----~~~~~-------------~~~~~~~~~-~ 169 (255)
T d1mo2a_ 108 DKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAM----NAWLE-------------ELTATLFDR-E 169 (255)
T ss_dssp SSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHH----HHHHH-------------HHHTTCC----
T ss_pred CCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccch----hhHHH-------------HHHHHhhcc-c
Confidence 7899999999999999999987654 5999999998755321110 00000 011111111 0
Q ss_pred ccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccchhHHHHHHHhcccceeE
Q 018916 195 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSAL 274 (349)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~ 274 (349)
.. .........+. ...+.+..+ ....+++|++++.+++|........+..... ...++
T Consensus 170 ~~----~~~~~~l~a~~------------~~~~~~~~~-----~~~~~~~p~l~v~a~~~~~~~~~~~w~~~~~-~~~~~ 227 (255)
T d1mo2a_ 170 TV----RMDDTRLTALG------------AYDRLTGQW-----RPRETGLPTLLVSAGEPMGPWPDDSWKPTWP-FEHDT 227 (255)
T ss_dssp -C----CCCHHHHHHHH------------HHHHHHHHC-----CCCCCCCCEEEEECCSSSSCCTTCCCCCCCC-SSCEE
T ss_pred cc----cCCHHHHHHHH------------HHHHHHhcC-----CCccccceEEEeecCCCCCcchhhHHHHhCC-CCcEE
Confidence 00 00111111111 111111111 1245789999999988865422222222222 24788
Q ss_pred EEEcCCCCcccc-cChhhHHHHHHHHHhh
Q 018916 275 VEVQACGSMVTE-EQPHAMLIPMEYFLMG 302 (349)
Q Consensus 275 ~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 302 (349)
+.++ ++|+.++ ++++++++.|.+||.+
T Consensus 228 ~~v~-G~H~~ml~~~~~~~A~~i~~~L~G 255 (255)
T d1mo2a_ 228 VAVP-GDHFTMVQEHADAIARHIDAWLGG 255 (255)
T ss_dssp EECC-SCCSSCSSCCHHHHHHHHHHHHTC
T ss_pred EEEC-CCCcccccccHHHHHHHHHHHhCc
Confidence 8887 6998655 6899999999999963
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.80 E-value=1.4e-21 Score=166.62 Aligned_cols=259 Identities=8% Similarity=-0.031 Sum_probs=136.6
Q ss_pred EEeCCCeeEEEEEccCCCCCeEEEecCCCCChhhhhcc-cccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCH
Q 018916 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQG-LFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (349)
Q Consensus 24 ~i~~~~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~-~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 102 (349)
.+..+...+.|....++++++|||+||++.++..|... ..+...+..++++||+||++|+||||+|..+ ...++.
T Consensus 40 ~~~~~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~----~~~~~~ 115 (318)
T d1qlwa_ 40 TVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD----ISAINA 115 (318)
T ss_dssp EEEESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCC----CHHHHH
T ss_pred ceeeceEEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCc----cccCCH
Confidence 34444445666666666778899999999998775221 0011234578899999999999999998732 223455
Q ss_pred HHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcc-cceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 103 DDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 103 ~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
.++++++.++++.+.. .++.++|||+||.++..++...+.. ...+++.++........... .....
T Consensus 116 ~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------- 184 (318)
T d1qlwa_ 116 VKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTP--NPTVA--------- 184 (318)
T ss_dssp HHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSS--CHHHH---------
T ss_pred HHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhh--hhhHH---------
Confidence 5556566665554432 4567789999999988877654332 22222222222111000000 00000
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch-
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS- 258 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~- 258 (349)
.. .......... ..... . ...................... . ..............+++|+|+++|++|..++
T Consensus 185 ~~-~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~ 257 (318)
T d1qlwa_ 185 NL-SKLAIKLDGT-VLLSH--S-QSGIYPFQTAAMNPKGITAIVS-V-EPGECPKPEDVKPLTSIPVLVVFGDHIEEFPR 257 (318)
T ss_dssp HH-HHHHHHHTSE-EEEEE--G-GGTTHHHHHHHHCCTTEEEEEE-E-SCSCCCCGGGCGGGTTSCEEEEECSSCTTCTT
T ss_pred HH-HHHHhhhccc-cchhh--h-cccchhhhhhhhhhhHHHHHHh-h-hcccccchhhhhhhccCCEEEEecCcCcccCh
Confidence 00 0000000000 00000 0 0000000000000000000000 0 0001123445567789999999999999872
Q ss_pred ------hHHHHHHHhcc--cceeEEEEc-----CCCCcccccCh-hhHHHHHHHHHhhcc
Q 018916 259 ------EAVHMTSKIDR--RYSALVEVQ-----ACGSMVTEEQP-HAMLIPMEYFLMGYG 304 (349)
Q Consensus 259 ------~~~~~~~~~~~--~~~~~~~i~-----~~gH~~~~e~p-~~~~~~i~~fl~~~~ 304 (349)
..+.+.+.+.. .+++++.++ |+||+++.|.+ +++++.|.+||++..
T Consensus 258 ~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 258 WAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp THHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred hhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 12223343332 237788865 67899999875 899999999999863
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.79 E-value=8.1e-18 Score=143.01 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=92.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
.+.+|||+||++++...+...-+|......+.++||+|+++|+||+|.|+.. ....+++++++.++++.++.++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~------~~~~~~l~~~i~~~~~~~~~~~ 80 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGP------NGRGEQLLAYVKQVLAATGATK 80 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTST------TSHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCC------cccHHHHHHHHHHHHHHhCCCC
Confidence 4557999999988765543333476666777788999999999999987632 2467899999999999999999
Q ss_pred EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
++++||||||.++..++.++|++|.++|+++++....
T Consensus 81 v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~gs 117 (319)
T d1cvla_ 81 VNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGS 117 (319)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred EEEEeccccHHHHHHHHHHCccccceEEEECCCCCCC
Confidence 9999999999999999999999999999999876543
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.76 E-value=1.1e-17 Score=142.66 Aligned_cols=230 Identities=8% Similarity=-0.023 Sum_probs=129.7
Q ss_pred eeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 22 DNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 22 ~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
+..+.+ +|.+++...+.| +..|+||++||++.+... | .....++++||.|+++|+||||.|.......
T Consensus 57 ~v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~------~-~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~ 129 (322)
T d1vlqa_ 57 DVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGF------P-HDWLFWPSMGYICFVMDTRGQGSGWLKGDTP 129 (322)
T ss_dssp EEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCC------G-GGGCHHHHTTCEEEEECCTTCCCSSSCCCCC
T ss_pred EEEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCc------H-HHHHHHHhCCCEEEEeeccccCCCCCCcccc
Confidence 334444 566777655432 234799999998766422 2 2334678899999999999999886431110
Q ss_pred C---------------------CCCCHHHHHHHHHHHHHHc------CCCcEEEEEechhHHHHHHHHHhhhcccceeEE
Q 018916 97 E---------------------PVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLIL 149 (349)
Q Consensus 97 ~---------------------~~~~~~~~~~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 149 (349)
. ..........|....++.+ +..++.++|+|+||.+++..+...+ ++++++.
T Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~ 208 (322)
T d1vlqa_ 130 DYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLC 208 (322)
T ss_dssp BCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEE
T ss_pred ccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEE
Confidence 0 0111222333443333322 2246899999999999997777665 5888887
Q ss_pred ecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHh
Q 018916 150 VSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI 229 (349)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (349)
..+..... .... ..... ..... . ..+... ............
T Consensus 209 ~~~~~~~~--~~~~---------~~~~~-~~~~~-~-~~~~~~-------------------------~~~~~~~~~~~~ 249 (322)
T d1vlqa_ 209 DVPFLCHF--RRAV---------QLVDT-HPYAE-I-TNFLKT-------------------------HRDKEEIVFRTL 249 (322)
T ss_dssp ESCCSCCH--HHHH---------HHCCC-TTHHH-H-HHHHHH-------------------------CTTCHHHHHHHH
T ss_pred eCCccccH--HHHH---------hhccc-cchhh-H-Hhhhhc-------------------------CcchhhhHHHHh
Confidence 66554321 1000 00000 00000 0 001000 000000011111
Q ss_pred cCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHHHhcccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 230 NGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 230 ~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.. .+....+.++++|+|+++|++|.++ +.+..+.++++. .++++++++++|.... +...+...+||+++
T Consensus 250 ~~-~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~p~~~H~~~~---~~~~~~~~~~l~~~ 320 (322)
T d1vlqa_ 250 SY-FDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGGG---SFQAVEQVKFLKKL 320 (322)
T ss_dssp HT-TCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTTH---HHHHHHHHHHHHHH
T ss_pred hh-hhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CeEEEEECCCCCCCcc---ccCHHHHHHHHHHH
Confidence 11 3455556788999999999999998 455667777764 4889999999995421 12223345677664
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.76 E-value=2.6e-17 Score=135.91 Aligned_cols=232 Identities=11% Similarity=0.066 Sum_probs=133.5
Q ss_pred ceeEEeCCCeeEEEEEccCC----CC--CeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ----DK--PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~----~~--p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
+..++..++.++.|..+-|+ ++ |+||++||.+.......... .......+..+||.|+.+|.||+|.+.....
T Consensus 5 ~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~-~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~ 83 (258)
T d2bgra2 5 KLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFR-LNWATYLASTENIIVASFDGRGSGYQGDKIM 83 (258)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCC-CSHHHHHHHTTCCEEEEECCTTCSSSCHHHH
T ss_pred eEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccC-cCHHHHHHhcCCcEEEeecccccCCcchHHH
Confidence 34456679999999887543 23 79999999522211111000 1112223456899999999999864431100
Q ss_pred -CCCCCCC---HHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhh
Q 018916 95 -DDEPVLS---VDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (349)
Q Consensus 95 -~~~~~~~---~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (349)
.....+. .++..+.+..+.+...+ +++.++|+|+||.+++.++..+|+.+...+..++..........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 157 (258)
T d2bgra2 84 HAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSV------ 157 (258)
T ss_dssp GGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHH------
T ss_pred HhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccccccccccc------
Confidence 0011122 22222222222222222 46999999999999999999999987777766655432211100
Q ss_pred hHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhcccc-CCceE
Q 018916 169 SNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSL 247 (349)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl 247 (349)
........ .. .....+.... .+......++ ++|++
T Consensus 158 ----------------~~~~~~~~-~~-------~~~~~~~~~~--------------------~~~~~~~~~~~~~P~l 193 (258)
T d2bgra2 158 ----------------YTERYMGL-PT-------PEDNLDHYRN--------------------STVMSRAENFKQVEYL 193 (258)
T ss_dssp ----------------HHHHHHCC-CS-------TTTTHHHHHH--------------------SCSGGGGGGGGGSEEE
T ss_pred ----------------ccchhccc-cc-------chhhHHHhhc--------------------ccccccccccccCChh
Confidence 00001111 00 0000011100 1112222333 37999
Q ss_pred EEEeCCCccc--hhHHHHHHHhcc--cceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 248 IFVGESSPFH--SEAVHMTSKIDR--RYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
+++|++|..+ ..++++.+.+.. ..++++++++++|.... +..+++.+.+.+||++.
T Consensus 194 i~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~ 254 (258)
T d2bgra2 194 LIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQC 254 (258)
T ss_dssp EEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999988 566777777654 24789999999997544 56778899999999986
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.74 E-value=4.6e-16 Score=124.64 Aligned_cols=199 Identities=11% Similarity=0.097 Sum_probs=130.4
Q ss_pred eEEeCCCeeEEEEEccC--CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCC
Q 018916 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (349)
Q Consensus 23 ~~i~~~~~~l~~~~~g~--~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 100 (349)
.+|+...|+|.....-+ +..+++|++||.+..+.+..+.. .......+.+.||.|+.+|+||.|.|..... ....
T Consensus 3 v~i~g~~G~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~-~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~--~~~~ 79 (218)
T d2i3da1 3 VIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQI-VYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD--HGAG 79 (218)
T ss_dssp EEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHH-HHHHHHHHHHTTCEEEEECCTTSTTCCSCCC--SSHH
T ss_pred EEEeCCCccEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHH-HHHHHHHHHhcCeeEEEEecCccCCCccccc--cchh
Confidence 45677777887654433 35679999998543332222211 1134455677899999999999999874321 1111
Q ss_pred CHHHHHHHHHHHHHHc-CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 101 SVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 101 ~~~~~~~~l~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
..++....+..+.... ...+++++|+|+||.+++.++.+.+. +.+++++.+.......
T Consensus 80 e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~-------------------- 138 (218)
T d2i3da1 80 ELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYDF-------------------- 138 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSCC--------------------
T ss_pred HHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-ccceeeccccccccch--------------------
Confidence 1222222222222222 23679999999999999998887654 6677777665332100
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 257 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-- 257 (349)
..+....+|+++++|++|.++
T Consensus 139 ---------------------------------------------------------~~~~~~~~p~l~i~g~~D~~~~~ 161 (218)
T d2i3da1 139 ---------------------------------------------------------SFLAPCPSSGLIINGDADKVAPE 161 (218)
T ss_dssp ---------------------------------------------------------TTCTTCCSCEEEEEETTCSSSCH
T ss_pred ---------------------------------------------------------hhccccCCCceeeecccceecCh
Confidence 011223579999999999998
Q ss_pred hhHHHHHHHhccc---ceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 258 SEAVHMTSKIDRR---YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 258 ~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+...++.+.+... ..++++++|++|+.. .+-+++.+.+.+||+++
T Consensus 162 ~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~ 209 (218)
T d2i3da1 162 KDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRR 209 (218)
T ss_dssp HHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHHh
Confidence 5666676666532 368999999999765 67799999999999876
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.73 E-value=7.7e-17 Score=132.94 Aligned_cols=178 Identities=11% Similarity=0.047 Sum_probs=121.5
Q ss_pred eEEEEEc-cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018916 31 SLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (349)
Q Consensus 31 ~l~~~~~-g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l 109 (349)
.++|-.. +++.-|.|||+||++++...+ ......+.++||.|+++|++|++... .....++.+.+
T Consensus 40 ~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~------~~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~~ 105 (260)
T d1jfra_ 40 TIYYPTSTADGTFGAVVISPGFTAYQSSI------AWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSAL 105 (260)
T ss_dssp EEEEESCCTTCCEEEEEEECCTTCCGGGT------TTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHH
T ss_pred EEEEcCCCCCCCccEEEEECCCCCCHHHH------HHHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHHH
Confidence 4555322 223347999999998876442 23446778899999999999985422 11123333333
Q ss_pred HHHHHH------cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHH
Q 018916 110 AEVLNH------FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (349)
Q Consensus 110 ~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (349)
..+.+. ++.+++.++|||+||..++.++...+ ++.++|.+.+.....
T Consensus 106 ~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~-------------------------- 158 (260)
T d1jfra_ 106 DYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDK-------------------------- 158 (260)
T ss_dssp HHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCC--------------------------
T ss_pred HHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeecccccc--------------------------
Confidence 333332 23467999999999999998888776 577777666532110
Q ss_pred HHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccch---hH
Q 018916 184 LLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS---EA 260 (349)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~---~~ 260 (349)
.+.++++|+|+++|++|.+++ ..
T Consensus 159 ------------------------------------------------------~~~~~~~P~l~i~G~~D~~vp~~~~~ 184 (260)
T d1jfra_ 159 ------------------------------------------------------TWPELRTPTLVVGADGDTVAPVATHS 184 (260)
T ss_dssp ------------------------------------------------------CCTTCCSCEEEEEETTCSSSCTTTTH
T ss_pred ------------------------------------------------------cccccccceeEEecCCCCCCCHHHHH
Confidence 012457899999999999982 34
Q ss_pred HHHHHHhcc-cceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 261 VHMTSKIDR-RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 261 ~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
+.+.+.++. ...++++++|++|.........+.+.+..||+..
T Consensus 185 ~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~ 228 (260)
T d1jfra_ 185 KPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRF 228 (260)
T ss_dssp HHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHH
Confidence 455665544 2367899999999887777778888899999876
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.73 E-value=2.7e-17 Score=136.15 Aligned_cols=106 Identities=15% Similarity=0.109 Sum_probs=74.1
Q ss_pred eeEEEEEccCCCCCeEEEecCCCCCh----hhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHH
Q 018916 30 GSLSVTIYGDQDKPALVTYPDLALNY----MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (349)
Q Consensus 30 ~~l~~~~~g~~~~p~vv~lHG~~~~~----~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 105 (349)
..+.+...+++.+|+||++||.|... ...+..+ .......+.+.||.|+++|+|..+... ....+++.
T Consensus 19 ~~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~-~~~l~~~~~~~g~~v~~~dYrl~p~~~-------~~~~~~d~ 90 (263)
T d1vkha_ 19 KTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQL-ANTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDA 90 (263)
T ss_dssp GCEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHH-HHHHHHHCTTCCEEEEEECCCCTTTSC-------TTHHHHHH
T ss_pred ceEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHH-HHHHHHHHHhCCeEEEEeccccCcchh-------hhHHHHhh
Confidence 45666666667889999999964321 1111111 111223444779999999999864322 23567788
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhhhcc
Q 018916 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143 (349)
Q Consensus 106 ~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 143 (349)
.+.+..+++..+.++++++|||+||.+++.++...++.
T Consensus 91 ~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 91 VSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp HHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred hhhhhcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 88888888888889999999999999999998877653
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=4.6e-16 Score=125.77 Aligned_cols=181 Identities=10% Similarity=0.097 Sum_probs=115.2
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCC---------CCCCC--CCCCCC---CCHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF---------GAAAI--SDDEPV---LSVDDLA 106 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~---------s~~~~--~~~~~~---~~~~~~~ 106 (349)
..++|||+||+|.+...+ ......+...++.+++++-|.+.. +.-+. ...... ..+++.+
T Consensus 20 ~~~~VI~lHG~G~~~~~~------~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~ 93 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGW------AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAA 93 (229)
T ss_dssp CSEEEEEECCSSSCHHHH------HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHH------HHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHH
Confidence 456899999999987652 233345567799999988653211 00000 000111 1244445
Q ss_pred HHHHHHHHH-----cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhH
Q 018916 107 DQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVV 181 (349)
Q Consensus 107 ~~l~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (349)
+.+..+++. +..++++++|+|+||.+|+.++.++|+++.+++.+++......
T Consensus 94 ~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~----------------------- 150 (229)
T d1fj2a_ 94 ENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA----------------------- 150 (229)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG-----------------------
T ss_pred HHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccc-----------------------
Confidence 555555533 2346899999999999999999999999999998877532210
Q ss_pred HHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hh
Q 018916 182 KELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 259 (349)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~ 259 (349)
.+.. ... ...+.++|+++++|++|.++ +.
T Consensus 151 -------~~~~-~~~-----------------------------------------~~~~~~~Pvli~hG~~D~~vp~~~ 181 (229)
T d1fj2a_ 151 -------SFPQ-GPI-----------------------------------------GGANRDISILQCHGDCDPLVPLMF 181 (229)
T ss_dssp -------GSCS-SCC-----------------------------------------CSTTTTCCEEEEEETTCSSSCHHH
T ss_pred -------cccc-ccc-----------------------------------------ccccccCceeEEEcCCCCeeCHHH
Confidence 0000 000 00112579999999999998 44
Q ss_pred HHHHHHHh----cccceeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 260 AVHMTSKI----DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 260 ~~~~~~~~----~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.++..+.+ .+.+++++.++++||.+. ++ ..+.+.+||++.
T Consensus 182 ~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~wL~~~ 225 (229)
T d1fj2a_ 182 GSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDKL 225 (229)
T ss_dssp HHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEEeCCCCCccC---HH-HHHHHHHHHHhH
Confidence 45444443 234588999999999654 33 356788999986
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.70 E-value=7.9e-16 Score=122.05 Aligned_cols=187 Identities=22% Similarity=0.237 Sum_probs=126.2
Q ss_pred CeeEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCC--CCCCCCCCCHHHH-
Q 018916 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA--ISDDEPVLSVDDL- 105 (349)
Q Consensus 29 ~~~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~--~~~~~~~~~~~~~- 105 (349)
+.-++....+.++.|+||++||++++...+. .. ...+..++.|+.++.+..+.+... ..........+++
T Consensus 4 ~~y~~~~~~~~~~~P~vi~lHG~G~~~~~~~------~~-~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (203)
T d2r8ba1 4 DSYFHKSRAGVAGAPLFVLLHGTGGDENQFF------DF-GARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLE 76 (203)
T ss_dssp TSSCEEEECCCTTSCEEEEECCTTCCHHHHH------HH-HHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHH
T ss_pred ceeEeecCCCCCCCCEEEEECCCCCCHHHHH------HH-HHHhccCCeEEEeccccccccccccccccCccccchhHHH
Confidence 3345666667778999999999998875532 22 345567899999987765443221 1111122333333
Q ss_pred --HHHHHHHH----HHcCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcch
Q 018916 106 --ADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (349)
Q Consensus 106 --~~~l~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (349)
++.+.+++ ...+.++++++|||+||.+++.++.++|+.+.+++++++.......
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-------------------- 136 (203)
T d2r8ba1 77 RATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK-------------------- 136 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC--------------------
T ss_pred HHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc--------------------
Confidence 33333333 3467789999999999999999999999999999998886532100
Q ss_pred hHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--
Q 018916 180 VVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 257 (349)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-- 257 (349)
... .....|+++++|++|+++
T Consensus 137 ----------~~~-----------------------------------------------~~~~~~~~i~hG~~D~~vp~ 159 (203)
T d2r8ba1 137 ----------ISP-----------------------------------------------AKPTRRVLITAGERDPICPV 159 (203)
T ss_dssp ----------CCC-----------------------------------------------CCTTCEEEEEEETTCTTSCH
T ss_pred ----------ccc-----------------------------------------------ccccchhhccccCCCCcccH
Confidence 000 012458999999999999
Q ss_pred hhHHHHHHHhcccc--eeEEEEcCCCCcccccChhhHHHHHHHHHhhcc
Q 018916 258 SEAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 304 (349)
Q Consensus 258 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (349)
+.++.+.+.+...+ +++++++ +||.+. ++ ..+.+.+||.+.|
T Consensus 160 ~~~~~~~~~L~~~g~~v~~~~~~-ggH~~~---~~-~~~~~~~wl~~~g 203 (203)
T d2r8ba1 160 QLTKALEESLKAQGGTVETVWHP-GGHEIR---SG-EIDAVRGFLAAYG 203 (203)
T ss_dssp HHHHHHHHHHHHHSSEEEEEEES-SCSSCC---HH-HHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEC-CCCcCC---HH-HHHHHHHHHHhcC
Confidence 66677777776533 6788887 589754 33 4566899999875
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=2.8e-17 Score=136.79 Aligned_cols=107 Identities=13% Similarity=0.045 Sum_probs=89.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
.+-+|||+||++++...+.. .+|......+.++||+|+++|++|+|.+. ...+++++++.++++.++.++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~-~yw~~i~~~L~~~G~~v~~~~~~~~~~~~---------~~a~~l~~~i~~~~~~~g~~~ 75 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGV-DYWFGIPSALRRDGAQVYVTEVSQLDTSE---------VRGEQLLQQVEEIVALSGQPK 75 (285)
T ss_dssp CSSCEEEECCTTCCSEETTE-ESSTTHHHHHHHTTCCEEEECCCSSSCHH---------HHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCccccch-hhHHHHHHHHHhCCCEEEEeCCCCCCCcH---------HHHHHHHHHHHHHHHHcCCCe
Confidence 45569999999877554433 23766767777889999999999997533 466888999999999999999
Q ss_pred EEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
+++|||||||.++..++..+|++|++++.++++....
T Consensus 76 v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~Gs 112 (285)
T d1ex9a_ 76 VNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGS 112 (285)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred EEEEEECccHHHHHHHHHHCCccceeEEEECCCCCCC
Confidence 9999999999999999999999999999999876543
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.69 E-value=3.6e-16 Score=130.63 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=85.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 120 (349)
.+++|||+||++.++..++ |......+.+.||+|+.+|+||+|.++. ..+.+++++.+..+++..+.++
T Consensus 30 ~~~PVvlvHG~~~~~~~~~----~~~~~~~L~~~Gy~v~~~d~~g~g~~d~-------~~sae~la~~i~~v~~~~g~~k 98 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSF----DSNWIPLSTQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITALYAGSGNNK 98 (317)
T ss_dssp CSSEEEEECCTTCCHHHHH----TTTHHHHHHTTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCCcEEEECCCCCCCcchh----HHHHHHHHHhCCCeEEEecCCCCCCCch-------HhHHHHHHHHHHHHHHhccCCc
Confidence 4568999999988875532 3344566778899999999999987641 2466778888888888889999
Q ss_pred EEEEEechhHHHHHHHHHhhhc---ccceeEEecCCCCCC
Q 018916 121 VMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAP 157 (349)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~ 157 (349)
|.||||||||.++..++.++|+ +|+.+|.+++.....
T Consensus 99 V~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt 138 (317)
T d1tcaa_ 99 LPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138 (317)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred eEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCc
Confidence 9999999999999999998884 699999999987543
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.2e-16 Score=130.23 Aligned_cols=229 Identities=12% Similarity=0.111 Sum_probs=127.8
Q ss_pred eeEEeCCCeeEEEEEccCC----C--CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC----
Q 018916 22 DNLIKTSHGSLSVTIYGDQ----D--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA---- 91 (349)
Q Consensus 22 ~~~i~~~~~~l~~~~~g~~----~--~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~---- 91 (349)
-..++++|.+|+...+-|. + -|+||++||.+...... ...........+.++||.|+++|.||.+....
T Consensus 5 ~~~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~-~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~ 83 (258)
T d1xfda2 5 YRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVA-EKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLH 83 (258)
T ss_dssp BCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCC-CCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHH
T ss_pred EEEEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcC-CCcCcchHHHHHhcCCcEEEEeccccccccchhHhh
Confidence 3446778888887666442 2 27999999963322111 11101112234567899999999998643221
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCCCChhHHhhh
Q 018916 92 AISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYN 165 (349)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~ 165 (349)
....+......++..+.+..+++... .+++.++|||+||.+++.++...++ .+...+..++..........
T Consensus 84 ~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 160 (258)
T d1xfda2 84 EVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASA--- 160 (258)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHH---
T ss_pred hhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccccc---
Confidence 00111111234444444444444333 3679999999999999987766554 35555555554332211110
Q ss_pred hhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccc-cCC
Q 018916 166 KVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQC 244 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~ 244 (349)
....++..... .++ .... ......+.+ .++
T Consensus 161 -------------------~~~~~~~~~~~-------~~~-------~~~~----------------~s~~~~~~~~~~~ 191 (258)
T d1xfda2 161 -------------------FSERYLGLHGL-------DNR-------AYEM----------------TKVAHRVSALEEQ 191 (258)
T ss_dssp -------------------HHHHHHCCCSS-------CCS-------STTT----------------TCTHHHHTSCCSC
T ss_pred -------------------ccccccccccc-------chH-------Hhhc----------------cchhhhhhhhhcc
Confidence 00001111010 000 0000 011111122 368
Q ss_pred ceEEEEeCCCccc--hhHHHHHHHhccc--ceeEEEEcCCCCcccc-cChhhHHHHHHHHHhhc
Q 018916 245 RSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 245 Pvlii~g~~D~~~--~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 303 (349)
|+|+++|+.|..+ ..+.++.+.+... +.+++++++++|.... +....+.+.+.+||++.
T Consensus 192 p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 192 QFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 255 (258)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred cccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 9999999999987 5666676666443 3789999999997654 45566778999999875
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.68 E-value=5.2e-16 Score=123.66 Aligned_cols=175 Identities=12% Similarity=0.094 Sum_probs=113.1
Q ss_pred cCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCC--CCCCCCCCCCCHHH-------HHHH
Q 018916 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGA--AAISDDEPVLSVDD-------LADQ 108 (349)
Q Consensus 38 g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~--~~~~~~~~~~~~~~-------~~~~ 108 (349)
|.++.|+||++||++++... |... ...+..++.+++++.+...... ............++ +.+.
T Consensus 19 ~~~~~p~vv~lHG~g~~~~~------~~~l-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (209)
T d3b5ea1 19 GKESRECLFLLHGSGVDETT------LVPL-ARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAF 91 (209)
T ss_dssp TSSCCCEEEEECCTTBCTTT------THHH-HHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCCCHHH------HHHH-HHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHH
Confidence 44578999999999988644 3222 3556678999998764211000 00000111123232 3333
Q ss_pred HHHHHHHcC--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHH
Q 018916 109 IAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (349)
Q Consensus 109 l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (349)
|..+.++.+ .++++++|||+||.+++.++.++|+++.+++++++.....
T Consensus 92 l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~----------------------------- 142 (209)
T d3b5ea1 92 TNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD----------------------------- 142 (209)
T ss_dssp HHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-----------------------------
T ss_pred HHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc-----------------------------
Confidence 444444444 4689999999999999999999999999999988754311
Q ss_pred HhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-hhHHHHHH
Q 018916 187 KRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTS 265 (349)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~-~~~~~~~~ 265 (349)
. . . .....++|+++++|++|+++ +...++.+
T Consensus 143 -----~-~--------~----------------------------------~~~~~~~p~~~~~G~~D~~~~~~~~~~~~ 174 (209)
T d3b5ea1 143 -----H-V--------P----------------------------------ATDLAGIRTLIIAGAADETYGPFVPALVT 174 (209)
T ss_dssp -----S-C--------C----------------------------------CCCCTTCEEEEEEETTCTTTGGGHHHHHH
T ss_pred -----c-c--------c----------------------------------ccccccchheeeeccCCCccCHHHHHHHH
Confidence 0 0 0 00123579999999999998 56666777
Q ss_pred Hhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHh
Q 018916 266 KIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLM 301 (349)
Q Consensus 266 ~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 301 (349)
.+... +++++++++ ||.+. +++ .+.+.+||.
T Consensus 175 ~l~~~G~~v~~~~~~g-gH~i~---~~~-~~~~~~wl~ 207 (209)
T d3b5ea1 175 LLSRHGAEVDARIIPS-GHDIG---DPD-AAIVRQWLA 207 (209)
T ss_dssp HHHHTTCEEEEEEESC-CSCCC---HHH-HHHHHHHHH
T ss_pred HHHHCCCCeEEEEECC-CCCCC---HHH-HHHHHHHhC
Confidence 66543 378889975 89764 333 466789985
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.64 E-value=4e-15 Score=117.78 Aligned_cols=176 Identities=15% Similarity=0.213 Sum_probs=116.1
Q ss_pred CCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCC--CCCCCCCHHH-------HHHHH
Q 018916 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS--DDEPVLSVDD-------LADQI 109 (349)
Q Consensus 39 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~~-------~~~~l 109 (349)
++.+|+||++||++++... |... ...+.+++.|++++.+..+....... ........++ +.+.+
T Consensus 11 ~~~~P~vi~lHG~g~~~~~------~~~~-~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 83 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGNELD------LLPL-AEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFL 83 (202)
T ss_dssp CTTSCEEEEECCTTCCTTT------THHH-HHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHH------HHHH-HHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHH
Confidence 4577999999999877644 2122 45667899999998655443221100 0111223333 33333
Q ss_pred HHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHHHHH
Q 018916 110 AEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (349)
Q Consensus 110 ~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (349)
..+.+..++ .++.++|+|+||.+++.++.++|+++.+++++++......
T Consensus 84 ~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~----------------------------- 134 (202)
T d2h1ia1 84 DEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------------------- 134 (202)
T ss_dssp HHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-----------------------------
T ss_pred HHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc-----------------------------
Confidence 334445454 5899999999999999999999999999998876533210
Q ss_pred hhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHHHHH
Q 018916 188 RYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 265 (349)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~~~~ 265 (349)
. ........|+++++|++|+++ +..+++.+
T Consensus 135 ------~------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~ 166 (202)
T d2h1ia1 135 ------M------------------------------------------QLANLAGKSVFIAAGTNDPICSSAESEELKV 166 (202)
T ss_dssp ------C------------------------------------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHH
T ss_pred ------c------------------------------------------cccccccchhhcccccCCCccCHHHHHHHHH
Confidence 0 000122468899999999998 56677777
Q ss_pred Hhcccc--eeEEEEcCCCCcccccChhhHHHHHHHHHhhc
Q 018916 266 KIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 266 ~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (349)
.+...+ .+++.++ +||.+. .+..+.+.+||++.
T Consensus 167 ~l~~~g~~~~~~~~~-ggH~~~----~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 167 LLENANANVTMHWEN-RGHQLT----MGEVEKAKEWYDKA 201 (202)
T ss_dssp HHHTTTCEEEEEEES-STTSCC----HHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEC-CCCcCC----HHHHHHHHHHHHHh
Confidence 776543 6788887 589653 44567788999863
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.59 E-value=3.5e-14 Score=116.49 Aligned_cols=188 Identities=11% Similarity=0.073 Sum_probs=112.1
Q ss_pred eEEEEEccCCCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018916 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 31 ~l~~~~~g~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 110 (349)
++.++.-.+...|+|||+||.+........ |......+.++||.|+.+|+|..+... ....+++..+.+.
T Consensus 51 ~lDiy~P~~~~~P~vv~iHGG~w~~g~~~~---~~~~a~~l~~~G~~Vv~~~YRl~p~~~-------~p~~~~d~~~a~~ 120 (261)
T d2pbla1 51 KFDLFLPEGTPVGLFVFVHGGYWMAFDKSS---WSHLAVGALSKGWAVAMPSYELCPEVR-------ISEITQQISQAVT 120 (261)
T ss_dssp EEEEECCSSSCSEEEEEECCSTTTSCCGGG---CGGGGHHHHHTTEEEEEECCCCTTTSC-------HHHHHHHHHHHHH
T ss_pred EEEEeccCCCCCCeEEEECCCCCccCChhH---hhhHHHHHhcCCceeeccccccccccc-------CchhHHHHHHHHH
Confidence 444333333567899999997543222111 223446677899999999999763311 1123334343444
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHhh------hcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcchhHHHH
Q 018916 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (349)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (349)
.+.+.. -++++|+|||.||.++..++... ...+++++.+++......... ...
T Consensus 121 ~~~~~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~--- 179 (261)
T d2pbla1 121 AAAKEI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR-----------------TSM--- 179 (261)
T ss_dssp HHHHHS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG-----------------STT---
T ss_pred HHHhcc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh-----------------hhh---
Confidence 444443 37999999999999998766543 234788888887655421100 000
Q ss_pred HHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc--hhHHH
Q 018916 185 LLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 262 (349)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~--~~~~~ 262 (349)
...+.. ..+.... .+......+...|+++++|++|..+ ..++.
T Consensus 180 --~~~~~~----------~~~~~~~-----------------------~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~ 224 (261)
T d2pbla1 180 --NEKFKM----------DADAAIA-----------------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQAIW 224 (261)
T ss_dssp --HHHHCC----------CHHHHHH-----------------------TCGGGCCCCCSCEEEEEEETTSCHHHHHHHHH
T ss_pred --cccccC----------CHHHHHH-----------------------hCchhhcccCCCeEEEEEecCCCchHHHHHHH
Confidence 001111 1111000 1112234456799999999999866 67778
Q ss_pred HHHHhcccceeEEEEcCCCCccccc
Q 018916 263 MTSKIDRRYSALVEVQACGSMVTEE 287 (349)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~gH~~~~e 287 (349)
+.+.+. ++.+++++.+|+-.++
T Consensus 225 ~~~~l~---~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 225 LVEAWD---ADHVIAFEKHHFNVIE 246 (261)
T ss_dssp HHHHHT---CEEEEETTCCTTTTTG
T ss_pred HHHHhC---CCceEeCCCCchhHHH
Confidence 888886 6788899999976553
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.56 E-value=3.6e-13 Score=108.77 Aligned_cols=194 Identities=11% Similarity=0.074 Sum_probs=116.5
Q ss_pred EeC-CCeeEEEEEccCC--CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCCC----
Q 018916 25 IKT-SHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE---- 97 (349)
Q Consensus 25 i~~-~~~~l~~~~~g~~--~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~---- 97 (349)
+.+ +|..++.+...|. ..|.||++|+..+.... . ......+.++||.|+++|+.|.+..........
T Consensus 8 ~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~-~-----~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~ 81 (233)
T d1dina_ 8 IQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAF-M-----RETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQR 81 (233)
T ss_dssp EECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHH-H-----HHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHH
T ss_pred EEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHH-H-----HHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHH
Confidence 444 5667776665443 45799999965443222 1 123456778899999999987654332111100
Q ss_pred -------CCCCHHHHHHHHHHHHHHcC---C--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhh
Q 018916 98 -------PVLSVDDLADQIAEVLNHFG---L--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (349)
Q Consensus 98 -------~~~~~~~~~~~l~~~l~~l~---~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (349)
...+.+....|+...++.+. . ++|.++|+|+||.+++.++.+. .+.+.+...+..
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~----------- 148 (233)
T d1dina_ 82 EQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVG----------- 148 (233)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSC-----------
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceeccccccc-----------
Confidence 02344455556665554442 2 4799999999999999877643 244433221100
Q ss_pred hhhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCc
Q 018916 166 KVMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 245 (349)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 245 (349)
. . ...+...++++|
T Consensus 149 -----------------------------~-------~------------------------------~~~~~~~~i~~P 162 (233)
T d1dina_ 149 -----------------------------L-------E------------------------------KQLNKVPEVKHP 162 (233)
T ss_dssp -----------------------------G-------G------------------------------GGGGGGGGCCSC
T ss_pred -----------------------------c-------c------------------------------cchhhhhccCCc
Confidence 0 0 011223467899
Q ss_pred eEEEEeCCCccc--hhHHHHHHHhcc-cceeEEEEcCCCCcccccChh--------hHHHHHHHHHhhc
Q 018916 246 SLIFVGESSPFH--SEAVHMTSKIDR-RYSALVEVQACGSMVTEEQPH--------AMLIPMEYFLMGY 303 (349)
Q Consensus 246 vlii~g~~D~~~--~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~fl~~~ 303 (349)
+++++|++|+.+ +..+.+.+.+.. .+.++++++|++|.++.+..+ +-.+.+.+||..+
T Consensus 163 vl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 163 ALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred ceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 999999999998 444445554432 347899999999976543332 2245566787664
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.55 E-value=6.6e-14 Score=120.27 Aligned_cols=130 Identities=10% Similarity=0.044 Sum_probs=90.9
Q ss_pred ceeEEeC-CCeeEEEEEccCC---CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~---~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
+...|+. +|.+|...++-|. .-|+||+.||++......... +......+.++||.|+++|.||+|.|+...
T Consensus 6 ~~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~--~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~--- 80 (347)
T d1ju3a2 6 SNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWST--QSTNWLEFVRDGYAVVIQDTRGLFASEGEF--- 80 (347)
T ss_dssp EEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHT--TSCCTHHHHHTTCEEEEEECTTSTTCCSCC---
T ss_pred eCeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCc--ccHHHHHHHHCCCEEEEEeeCCccccCCcc---
Confidence 3456776 6777877666543 347899999976532211111 112335778999999999999999987432
Q ss_pred CCCCCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 97 EPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
......++-+.++.+++..... .+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 81 ~~~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 81 VPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp CTTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred ccccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 2223444445566666665543 5899999999999999999998888999998887764
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.53 E-value=1.4e-13 Score=116.18 Aligned_cols=234 Identities=16% Similarity=0.138 Sum_probs=128.5
Q ss_pred ceeEEeCCCeeEEEEEccCC-CCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEP 98 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~-~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~ 98 (349)
+...+...++.+.++.+.++ +.|+||++||.|........ .......+++ .|+.|+.+|+|.... ...
T Consensus 57 ~~~~i~~~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~---~~~~~~~l~~~~g~~Vv~v~Yrlap~-------~~~ 126 (311)
T d1jjia_ 57 EDRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIES---HDALCRRIARLSNSTVVSVDYRLAPE-------HKF 126 (311)
T ss_dssp EEEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGG---GHHHHHHHHHHHTSEEEEEECCCTTT-------SCT
T ss_pred EEEEEeCCCCcEEEEEEcCCCCceEEEEEcCCCCccCChhh---hhhhhhhhhhcCCcEEEEeccccccc-------ccc
Confidence 44567777778887777653 55899999998643222111 1122234444 499999999997522 112
Q ss_pred CCCHHHHHHHHHHHH---HHcCC--CcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCCCChhHHhhhhhhh
Q 018916 99 VLSVDDLADQIAEVL---NHFGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKVMS 169 (349)
Q Consensus 99 ~~~~~~~~~~l~~~l---~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (349)
...+++..+.+..+. +.+++ +++.++|+|.||.+++.++....+ ...+.+++.|.............
T Consensus 127 p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~---- 202 (311)
T d1jjia_ 127 PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLE---- 202 (311)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHH----
T ss_pred chhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccc----
Confidence 234454444443333 33443 579999999999999877765433 46778888887764322111100
Q ss_pred HHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEE
Q 018916 170 NLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 249 (349)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 249 (349)
+... .. ..................... ............+...|++++
T Consensus 203 -------------------~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~sp~~~~~~~~pP~li~ 250 (311)
T d1jjia_ 203 -------------------FGEG-LW-----ILDQKIMSWFSEQYFSREEDK-------FNPLASVIFADLENLPPALII 250 (311)
T ss_dssp -------------------TSSS-CS-----SCCHHHHHHHHHHHCSSGGGG-------GCTTTSGGGSCCTTCCCEEEE
T ss_pred -------------------cccc-cc-----cccHHHhhhhhhhcccccccc-------cccccchhhcccccCCCEEEE
Confidence 0000 00 001111111111110000000 000000111111223689999
Q ss_pred EeCCCccchhHHHHHHHhcccc--eeEEEEcCCCCcccc-----cChhhHHHHHHHHH
Q 018916 250 VGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-----EQPHAMLIPMEYFL 300 (349)
Q Consensus 250 ~g~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl 300 (349)
+|+.|.+++.+..+.+++...+ +++++++|++|..+. +...+..+.|.+||
T Consensus 251 ~g~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 251 TAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp EEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred EcCCCCChHHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 9999988877788888876543 789999999995432 12345667777777
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.53 E-value=6e-14 Score=120.83 Aligned_cols=252 Identities=12% Similarity=0.027 Sum_probs=132.9
Q ss_pred ceeEEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+...+.+ +|..+.+..+-+ +..|+||++||.|....+..... +......+...|+.|+.+|+|..+.... .
T Consensus 80 ~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~-~~~~~~~la~~g~~VvsvdYRla~~~~p---e 155 (358)
T d1jkma_ 80 STETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRV-HRRWCTDLAAAGSVVVMVDFRNAWTAEG---H 155 (358)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHH-HHHHHHHHHHTTCEEEEEECCCSEETTE---E
T ss_pred EEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccc-cchHHHHHHhhhheeeeeeecccccccc---c
Confidence 4445554 566776655532 23468999999865422211111 1123456667899999999999743321 1
Q ss_pred CCCCCCHHHHHHHHHHHH---HHcCCCcEEEEEechhHHHHHHHHHhh-----hcccceeEEecCCCCCCCh-hHHhhhh
Q 018916 96 DEPVLSVDDLADQIAEVL---NHFGLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAPSW-TEWLYNK 166 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l---~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~-~~~~~~~ 166 (349)
......++|..+.+..+. ..++.++++++|+|.||.+++.++... ...+.++++..|....... .......
T Consensus 156 ~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 235 (358)
T d1jkma_ 156 HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLT 235 (358)
T ss_dssp CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchhhcc
Confidence 112234555555544444 345678999999999999998776542 3457888888887654321 1111000
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCce
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 246 (349)
........... .........+................... ......+. --.|+
T Consensus 236 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~a~~~~~~-~lPp~ 288 (358)
T d1jkma_ 236 ELPSLVENDGY-----------------------FIENGGMALLVRAYDPTGEHAEDPIAWPY---FASEDELR-GLPPF 288 (358)
T ss_dssp HCTHHHHTTTS-----------------------SSCHHHHHHHHHHHSSSSTTTTCTTTCGG---GCCHHHHT-TCCCE
T ss_pred cccchhccccc-----------------------ccchhhhhhHHhhcCCccCCccCcccccc---ccchhhcc-CCCCE
Confidence 00000000000 00111111111111000000000000000 00000111 12489
Q ss_pred EEEEeCCCccchhHHHHHHHhcccc--eeEEEEcCCCCcccc-------cChhhHHHHHHHHHhhc
Q 018916 247 LIFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-------EQPHAMLIPMEYFLMGY 303 (349)
Q Consensus 247 lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~-------e~p~~~~~~i~~fl~~~ 303 (349)
++++|+.|.+.+.+..+.+++...+ ++++++++.+|.... +..+++.+.|..|+...
T Consensus 289 li~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 289 VVAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp EEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 9999999988777778888776544 789999999995321 22345677888898764
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.41 E-value=2.1e-12 Score=109.30 Aligned_cols=112 Identities=12% Similarity=0.068 Sum_probs=64.5
Q ss_pred ceeEEeCCCe--eEEEEEccC----CCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKTSHG--SLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~~~~--~l~~~~~g~----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~ 93 (349)
++..+...++ .+..+.+-| +..|+||++||.|........ .......++. .||.|+.+|+|......
T Consensus 51 ~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~---~~~~~~~la~~~G~~V~~vdYrl~pe~~--- 124 (317)
T d1lzla_ 51 RELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAES---SDPFCVEVARELGFAVANVEYRLAPETT--- 124 (317)
T ss_dssp EEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGG---GHHHHHHHHHHHCCEEEEECCCCTTTSC---
T ss_pred EEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCcccccccccc---cchHHHhHHhhcCCcccccccccccccc---
Confidence 3444554333 355444332 234689999997532211111 1123344544 49999999999874322
Q ss_pred CCCCCCCCHHHHHHHHHHHH---HHcCC--CcEEEEEechhHHHHHHHHHhhhc
Q 018916 94 SDDEPVLSVDDLADQIAEVL---NHFGL--GAVMCMGVTAGAYILTLFAMKYRH 142 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~l---~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (349)
....+++..+.+..+. +.+++ ++|+++|+|.||.+++.++.+.++
T Consensus 125 ----~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~ 174 (317)
T d1lzla_ 125 ----FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARD 174 (317)
T ss_dssp ----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred ----ccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhh
Confidence 1233444444433332 34444 579999999999999988876543
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.40 E-value=8.4e-11 Score=102.50 Aligned_cols=82 Identities=10% Similarity=0.008 Sum_probs=65.1
Q ss_pred hhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--------------------CcEEEEEech
Q 018916 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--------------------GAVMCMGVTA 128 (349)
Q Consensus 69 ~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~--------------------~~v~lvGhS~ 128 (349)
..++.+||.|+.+|.||+|.|+.. ....+.++ ++|..++++.+.. .+|.++|+|+
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S~G~----~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY 204 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSSDGF----QTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 204 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSC----CCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHHHhCCCEEEEECCCCCCCCCCc----cccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCH
Confidence 457789999999999999998743 22344444 6677777776642 3799999999
Q ss_pred hHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 129 GAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 129 Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
||+.++.+|...|..+++++..++...
T Consensus 205 ~G~~q~~aA~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 205 LGTMAYGAATTGVEGLELILAEAGISS 231 (405)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSB
T ss_pred HHHHHHHHHhcCCccceEEEecCcccc
Confidence 999999999999888999998887664
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.40 E-value=4.9e-12 Score=100.87 Aligned_cols=177 Identities=12% Similarity=0.153 Sum_probs=103.0
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhc--CCeEEEEECCCCC------CCCCCCC-----CCCCCCCCH---HH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGH------EFGAAAI-----SDDEPVLSV---DD 104 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~--~g~~vi~~D~~G~------G~s~~~~-----~~~~~~~~~---~~ 104 (349)
.+++|||+||+|.+...+. .....+.. .++.+++++-|.. |.....+ ......... +.
T Consensus 13 ~~~~Vi~lHG~G~~~~~~~------~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 86 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYDFM------PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEV 86 (218)
T ss_dssp CSEEEEEECCTTCCTTTTH------HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHH
T ss_pred CCeEEEEEcCCCCChhhHH------HHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHH
Confidence 4569999999998875521 22222222 2566676654321 0000000 000111233 23
Q ss_pred HHHHHHHHHH---HcC--CCcEEEEEechhHHHHHHHHHh-hhcccceeEEecCCCCCCChhHHhhhhhhhHHHHhcCcc
Q 018916 105 LADQIAEVLN---HFG--LGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (349)
Q Consensus 105 ~~~~l~~~l~---~l~--~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (349)
..+.+.++++ ..+ .++++++|+|+||.+++.++.. .+..+.+++.+++......
T Consensus 87 ~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~-------------------- 146 (218)
T d1auoa_ 87 SAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG-------------------- 146 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC--------------------
T ss_pred HHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccc--------------------
Confidence 3333344433 333 4789999999999999988764 5667888888876432110
Q ss_pred hhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCCccc-
Q 018916 179 GVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 257 (349)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~- 257 (349)
. .... .. ...+.|+++++|++|.++
T Consensus 147 -------------~-~~~~-----~~-----------------------------------~~~~~pvl~~hG~~D~vvp 172 (218)
T d1auoa_ 147 -------------D-ELEL-----SA-----------------------------------SQQRIPALCLHGQYDDVVQ 172 (218)
T ss_dssp -------------T-TCCC-----CH-----------------------------------HHHTCCEEEEEETTCSSSC
T ss_pred -------------c-cccc-----ch-----------------------------------hccCCCEEEEecCCCCccC
Confidence 0 0000 00 011469999999999999
Q ss_pred -hhHHHHHHHhccc--ceeEEEEcCCCCcccccChhhHHHHHHHHHhh
Q 018916 258 -SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302 (349)
Q Consensus 258 -~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 302 (349)
+..+++.+.+... ++++++++ +||... ++..+.+.+||++
T Consensus 173 ~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~----~~~~~~i~~wl~~ 215 (218)
T d1auoa_ 173 NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL----PQEIHDIGAWLAA 215 (218)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEES-CSSSCC----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC-CCCccC----HHHHHHHHHHHHH
Confidence 5666777776653 37888886 899654 3345678888875
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.36 E-value=5.3e-12 Score=106.28 Aligned_cols=239 Identities=12% Similarity=0.061 Sum_probs=125.0
Q ss_pred ceeEEeCCCeeEEEEEccCC----CCCeEEEecCCCCChhhhhcccccchhhhhhhcC-CeEEEEECCCCCCCCCCCCCC
Q 018916 21 KDNLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISD 95 (349)
Q Consensus 21 ~~~~i~~~~~~l~~~~~g~~----~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~-g~~vi~~D~~G~G~s~~~~~~ 95 (349)
+...++.+|..+....+-|+ ..|+||++||.+....... . +......+..+ ++.|+.+|+|.....
T Consensus 47 ~~~~~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~--~-~~~~~~~~a~~~~~~v~~v~Yrl~p~~------ 117 (308)
T d1u4na_ 47 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE--T-HDPVCRVLAKDGRAVVFSVDYRLAPEH------ 117 (308)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT--T-THHHHHHHHHHHTSEEEEECCCCTTTS------
T ss_pred EEEEEecCCceEEEEEEeccccCCCCCEEEEEecCeeeeeccc--c-ccchhhhhhhccccccccccccccccc------
Confidence 45566677877776665442 3469999999753321111 1 11223344444 567889999876321
Q ss_pred CCCCCCHHHHHHHHHHHHHH---cC--CCcEEEEEechhHHHHHHHHHhhhc----ccceeEEecCCCCCCChhHHhhhh
Q 018916 96 DEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNK 166 (349)
Q Consensus 96 ~~~~~~~~~~~~~l~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~ 166 (349)
.....++|..+.+..+.+. ++ .++++++|+|.||.+++.++....+ .+.+..++.+..............
T Consensus 118 -~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (308)
T d1u4na_ 118 -KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIE 196 (308)
T ss_dssp -CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHH
T ss_pred -ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhh
Confidence 1223445555444444432 22 2579999999999999988776554 356666666665432211000000
Q ss_pred hhhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCce
Q 018916 167 VMSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 246 (349)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 246 (349)
. ..................+... ...... . ... ....... .--.|+
T Consensus 197 ~---~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~-~----~~s-~~~~~d~-~~~Pp~ 242 (308)
T d1u4na_ 197 E---NAEGYLLTGGMSLWFLDQYLNS------------------------LEELTH-P----WFS-PVLYPDL-SGLPPA 242 (308)
T ss_dssp H---TSSSSSSCHHHHHHHHHHHCSS------------------------GGGGGC-T----TTC-GGGCSCC-TTCCCE
T ss_pred h---ccccccccchhhhhhhhcccCc------------------------cccccc-h----hhh-hhhchhh-cCCCCe
Confidence 0 0000000000000000101110 000000 0 000 0000000 112489
Q ss_pred EEEEeCCCccchhHHHHHHHhcccc--eeEEEEcCCCCcccc-c----ChhhHHHHHHHHHhhc
Q 018916 247 LIFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-E----QPHAMLIPMEYFLMGY 303 (349)
Q Consensus 247 lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~-e----~p~~~~~~i~~fl~~~ 303 (349)
++++|+.|.+++.++.+.+++...+ ++++++++.+|.... . ..++..+.+.+||++.
T Consensus 243 li~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 243 YIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred eEEecCcCCchHHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 9999999988877788888876543 799999999995433 1 2235677788888763
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.36 E-value=9.9e-11 Score=101.17 Aligned_cols=135 Identities=11% Similarity=0.063 Sum_probs=86.9
Q ss_pred ceeEEeC-CCeeEEEEEccC---CCCCeEEEecCCCCChhhhhccc-----ccchhhhhhhcCCeEEEEECCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGL-----FFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~~~~~-----~~~~~~~~~l~~g~~vi~~D~~G~G~s~~ 91 (349)
+...|+. +|.+|...++-| +.-|+||+.|+++.+........ ........+.++||.|+.+|.||+|.|+.
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 5567777 566787655543 34478899998765432211000 01123345788999999999999999874
Q ss_pred CCCCCC---------CCCCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 92 AISDDE---------PVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 92 ~~~~~~---------~~~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
...... .....+|..+.+.-+.++..+ ++|.++|+|+||++++.+|...|..++++|...+...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 105 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 321110 011234444333333343223 5899999999999999999999989999999888764
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.34 E-value=4.2e-11 Score=97.73 Aligned_cols=184 Identities=10% Similarity=0.020 Sum_probs=106.9
Q ss_pred CCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccchhh-hhhhc----CCeEEEEECCCCCCCCCCCCCCC
Q 018916 28 SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLL----HNFCIYHINPPGHEFGAAAISDD 96 (349)
Q Consensus 28 ~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~~~-~~~l~----~g~~vi~~D~~G~G~s~~~~~~~ 96 (349)
.+....|.++-|+ .-|+||++||.+.+...+.......... ..... ..+.+...+.... ... ...
T Consensus 32 ~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~ 107 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAA---GPG-IAD 107 (255)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCC---CTT-CSC
T ss_pred CCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccc---ccc-ccc
Confidence 5667777776432 2379999999987766553222111111 11111 1223333332221 110 011
Q ss_pred CCCCCHHHHHHHHHHHHHH-c----CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHH
Q 018916 97 EPVLSVDDLADQIAEVLNH-F----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (349)
Q Consensus 97 ~~~~~~~~~~~~l~~~l~~-l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (349)
......+.+.+++...++. . ..+++.++|+|+||..++.++.++|+++.+++.+++.........
T Consensus 108 ~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~---------- 177 (255)
T d1jjfa_ 108 GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNER---------- 177 (255)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHH----------
T ss_pred cccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCccccc----------
Confidence 1111233444444444433 2 235699999999999999999999999999999887654321100
Q ss_pred HHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEe
Q 018916 172 LYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 251 (349)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g 251 (349)
.+.. ..........|+++.+|
T Consensus 178 -----------------~~~~------------------------------------------~~~~~~~~~~~~~i~~G 198 (255)
T d1jjfa_ 178 -----------------LFPD------------------------------------------GGKAAREKLKLLFIACG 198 (255)
T ss_dssp -----------------HCTT------------------------------------------TTHHHHHHCSEEEEEEE
T ss_pred -----------------cccc------------------------------------------HHHHhhccCCcceEEeC
Confidence 0000 00001122468999999
Q ss_pred CCCccchhHHHHHHHhcccc--eeEEEEcCCCCcc
Q 018916 252 ESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMV 284 (349)
Q Consensus 252 ~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~ 284 (349)
++|.+++..+++.+.+...+ .++.+++++||..
T Consensus 199 ~~D~~~~~~~~~~~~L~~~g~~~~~~~~~~ggH~~ 233 (255)
T d1jjfa_ 199 TNDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDF 233 (255)
T ss_dssp TTCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSH
T ss_pred CCCCCchHHHHHHHHHHHCCCCEEEEEECCCCcCH
Confidence 99999877777777776533 7888999999954
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.23 E-value=4.9e-10 Score=92.26 Aligned_cols=240 Identities=7% Similarity=-0.031 Sum_probs=121.4
Q ss_pred ceeEEeC-CCeeEEEEEccCC------CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~~------~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~ 93 (349)
++..+.+ +|.+|....+.++ .-|+||++||.+........ ...........++-+...+.++........
T Consensus 8 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T d1qfma2 8 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNY---SVSRLIFVRHMGGVLAVANIRGGGEYGETW 84 (280)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCC---CHHHHHHHHHHCCEEEEECCTTSSTTHHHH
T ss_pred EEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCc---chhhhhhhcccceeeeccccccccccchhh
Confidence 4444554 6667776654432 34899999996544322111 111112333457777777777664321100
Q ss_pred CCCCCCCCHHHHHHHHHH----HHHHc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhh
Q 018916 94 SDDEPVLSVDDLADQIAE----VLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (349)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~----~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (349)
.............++... ..... ......++|+|.||..+...+...++.+.+++...+............
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 161 (280)
T d1qfma2 85 HKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTI--- 161 (280)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT---
T ss_pred hhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhccccc---
Confidence 000111111222222222 22222 225688999999999999999999988888887777665432211000
Q ss_pred hhHHHHhcCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceE
Q 018916 168 MSNLLYYYGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 247 (349)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 247 (349)
.... . ...... . ..+....... ...... .+..........|+|
T Consensus 162 ----------~~~~---~-~~~~~~-~--------~~~~~~~~~~-------------~~~~~~-~s~~~~~~~~~pP~L 204 (280)
T d1qfma2 162 ----------GHAW---T-TDYGCS-D--------SKQHFEWLIK-------------YSPLHN-VKLPEADDIQYPSML 204 (280)
T ss_dssp ----------GGGG---H-HHHCCT-T--------SHHHHHHHHH-------------HCGGGC-CCCCSSTTCCCCEEE
T ss_pred ----------cccc---e-ecccCC-C--------cccccccccc-------------cccccc-cchhhhcccCCCceE
Confidence 0000 0 000000 0 0100000000 000000 111122222345899
Q ss_pred EEEeCCCccc--hhHHHHHHHhc---------ccceeEEEEcCCCCcccccChh--hHHHHHHHHHhhc
Q 018916 248 IFVGESSPFH--SEAVHMTSKID---------RRYSALVEVQACGSMVTEEQPH--AMLIPMEYFLMGY 303 (349)
Q Consensus 248 ii~g~~D~~~--~~~~~~~~~~~---------~~~~~~~~i~~~gH~~~~e~p~--~~~~~i~~fl~~~ 303 (349)
+++|++|..+ ..+.++.+++. +..+++++++++||...-...+ +....+.+||++.
T Consensus 205 iihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~ 273 (280)
T d1qfma2 205 LLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARC 273 (280)
T ss_dssp EEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999999 56777777773 2337899999999965432222 2334567888875
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.17 E-value=2.2e-09 Score=87.84 Aligned_cols=130 Identities=12% Similarity=0.078 Sum_probs=85.1
Q ss_pred eeEEeC--CCeeEEEEEccCCCCCeEEEecCCCC--ChhhhhcccccchhhhhhhcCCeEEEEECCCCCC-CCCCCCCCC
Q 018916 22 DNLIKT--SHGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAISDD 96 (349)
Q Consensus 22 ~~~i~~--~~~~l~~~~~g~~~~p~vv~lHG~~~--~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G-~s~~~~~~~ 96 (349)
+..+.. .+..+.+.... +..|+|+++||.++ +...|.... .........++-|+.+|--+.+ .+..+ .
T Consensus 6 ~~~v~s~~~~r~~~~~v~~-~~~pvlylLhG~~g~~~~~~w~~~~---~~~~~~~~~~~iVV~p~g~~~~~y~~~~---~ 78 (267)
T d1r88a_ 6 NLMVPSPSMGRDIPVAFLA-GGPHAVYLLDAFNAGPDVSNWVTAG---NAMNTLAGKGISVVAPAGGAYSMYTNWE---Q 78 (267)
T ss_dssp EEEEEETTTTEEEEEEEEC-CSSSEEEEECCSSCCSSSCHHHHTS---CHHHHHTTSSSEEEEECCCTTSTTSBCS---S
T ss_pred EEEEecccCCceeeEEEEC-CCCCEEEEcCCCCCCCCcchhhhcc---HHHHHHhhCCeEEEEECCCCCcCCcccc---c
Confidence 344443 45567776665 35599999999754 333443322 2334555679999999852221 11211 1
Q ss_pred CCCCCHHH-HHHHHHHHHH-HcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC
Q 018916 97 EPVLSVDD-LADQIAEVLN-HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (349)
Q Consensus 97 ~~~~~~~~-~~~~l~~~l~-~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (349)
.....+++ +.+++..+++ .++. +++.+.|+||||+.|+.+|.++|+++.+++.+++......
T Consensus 79 ~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~ 144 (267)
T d1r88a_ 79 DGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSN 144 (267)
T ss_dssp CTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTS
T ss_pred cccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCC
Confidence 12234544 4556776664 4443 5799999999999999999999999999999998876543
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.11 E-value=8e-09 Score=89.16 Aligned_cols=134 Identities=10% Similarity=0.072 Sum_probs=84.9
Q ss_pred ceeEEeC-CCeeEEEEEccC---CCCCeEEEecCCCCChhhh-------hcccccchhhhhhhcCCeEEEEECCCCCCCC
Q 018916 21 KDNLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSC-------FQGLFFCPEACSLLLHNFCIYHINPPGHEFG 89 (349)
Q Consensus 21 ~~~~i~~-~~~~l~~~~~g~---~~~p~vv~lHG~~~~~~~~-------~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s 89 (349)
+...|+. +|.+|+..++-| +.-|+||+.|+++..+... .... .......+.++||.|+.+|.||+|.|
T Consensus 29 ~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~Gy~vv~~d~RG~g~S 107 (385)
T d2b9va2 29 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREV-LPQGDDVFVEGGYIRVFQDIRGKYGS 107 (385)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHH-SCGGGHHHHHTTCEEEEEECTTSTTC
T ss_pred eEEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccc-cchHHHHHHhCCcEEEEEcCCcccCC
Confidence 4556776 667887766543 3446788878765322110 0000 11233467789999999999999998
Q ss_pred CCCCCCCCC---------CCCHHHHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCC
Q 018916 90 AAAISDDEP---------VLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (349)
Q Consensus 90 ~~~~~~~~~---------~~~~~~~~~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (349)
......... ....+|..+.++-+.++..+ .+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 108 ~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 108 QGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred CCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 753221110 11234444443333333223 5799999999999999999988888999888776654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.03 E-value=6.1e-11 Score=96.26 Aligned_cols=106 Identities=12% Similarity=0.141 Sum_probs=72.8
Q ss_pred eEEEecCCCCChhhhhcccccchhhhhhhc---CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc--CC
Q 018916 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--GL 118 (349)
Q Consensus 44 ~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~---~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l--~~ 118 (349)
||||+||++++...+.. | ..+..+++ .|+.|+++++.....++. .......+.++++.+.+.++.. +.
T Consensus 7 PVVLvHGlg~s~~~~~~---m-~~l~~~l~~~~pG~~V~~l~~g~~~~~~~---~~~~~~~~~~~~e~v~~~I~~~~~~~ 79 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLS---M-GAIKKMVEKKIPGIHVLSLEIGKTLREDV---ENSFFLNVNSQVTTVCQILAKDPKLQ 79 (279)
T ss_dssp CEEEECCTTCCSCCTTT---T-HHHHHHHHHHSTTCCEEECCCSSSHHHHH---HHHHHSCHHHHHHHHHHHHHSCGGGT
T ss_pred cEEEECCCCCCCCChHH---H-HHHHHHHHHHCCCeEEEEEEcCCCccccc---ccchhhhHHHHHHHHHHHHHhccccc
Confidence 89999999876433211 2 12233333 389999999866533210 0011245778888887777643 34
Q ss_pred CcEEEEEechhHHHHHHHHHhhhc-ccceeEEecCCCCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKA 156 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~ 156 (349)
+++++|||||||.++-.++.++++ .|..+|.++++...
T Consensus 80 ~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred cceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCCC
Confidence 689999999999999999998875 59999999977643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.00 E-value=5.5e-11 Score=98.88 Aligned_cols=108 Identities=11% Similarity=0.076 Sum_probs=69.6
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhhc-CCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----H
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----N 114 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l----~ 114 (349)
+++|++|++||+..++...+ +......++. .+++||++|+... +.... ...........+.+..++ +
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~----~~~~~~a~l~~~d~NVI~VDW~~~--a~~~Y--~~a~~n~~~Vg~~ia~~i~~l~~ 139 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENW----LLDMCKNMFKVEEVNCICVDWKKG--SQTSY--TQAANNVRVVGAQVAQMLSMLSA 139 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTH----HHHHHHHHTTTCCEEEEEEECHHH--HSSCH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCCCCcch----HHHHHHHHHhcCCceEEEEeeccc--cCcch--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999987764421 2122234444 4799999999764 22100 000112333444444444 4
Q ss_pred HcC--CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 115 HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 115 ~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
..+ .++++|||||+||.||- +|.++..++.+++.++|+.+.
T Consensus 140 ~~g~~~~~vhlIGhSLGAhvAG-~aG~~~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 140 NYSYSPSQVQLIGHSLGAHVAG-EAGSRTPGLGRITGLDPVEAS 182 (337)
T ss_dssp HHCCCGGGEEEEEETHHHHHHH-HHHHTSTTCCEEEEESCCCTT
T ss_pred hcCCChhheEEEeecHHHhhhH-HHHHhhccccceeccCCCccc
Confidence 434 47899999999999998 455555679999999998764
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.95 E-value=2.5e-10 Score=94.71 Aligned_cols=109 Identities=8% Similarity=0.047 Sum_probs=74.1
Q ss_pred CCCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----
Q 018916 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN---- 114 (349)
Q Consensus 40 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~---- 114 (349)
.++|++|++||+..++...+ +......++ ..+++||++|+... +.... ...........+.+..+++
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~----~~~~~~a~l~~~d~NVi~VDW~~~--a~~~Y--~~a~~n~~~Vg~~ia~~i~~l~~ 139 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGW----LLDMCKKMFQVEKVNCICVDWRRG--SRTEY--TQASYNTRVVGAEIAFLVQVLST 139 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTH----HHHHHHHHHTTCCEEEEEEECHHH--HSSCH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCcccCCCCccc----HHHHHHHHHhcCCceEEEEechhh--cccch--HHHHHhHHHHHHHHHHHHHHHHH
Confidence 46899999999987764421 222333444 35799999999765 32110 0011233444445555543
Q ss_pred Hc--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCC
Q 018916 115 HF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (349)
Q Consensus 115 ~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (349)
.. ..++++|||||+||.+|-....+.+.++.+++-++|+.+.
T Consensus 140 ~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 140 EMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred hcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 32 3488999999999999998888888889999999998754
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.94 E-value=6.5e-09 Score=83.92 Aligned_cols=184 Identities=11% Similarity=0.048 Sum_probs=103.7
Q ss_pred CeeEEEEEccC-----CCCCeEEEecCCCCChhhhhcccccchhhhhhhcCC----eEEEEECCCCCCCCCCCCCCCCCC
Q 018916 29 HGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN----FCIYHINPPGHEFGAAAISDDEPV 99 (349)
Q Consensus 29 ~~~l~~~~~g~-----~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g----~~vi~~D~~G~G~s~~~~~~~~~~ 99 (349)
+....+.++-+ ...|+||++||.+... .. .++ ..+..+.+++ +-++.++....+.-... .....
T Consensus 26 g~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~---~~-~~~-~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~--~~~~~ 98 (246)
T d3c8da2 26 KNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQ---SM-PVW-PVLTSLTHRQQLPPAVYVLIDAIDTTHRAHE--LPCNA 98 (246)
T ss_dssp TEEEEEEEEEC-----CCCCEEEESSHHHHHH---TS-CCH-HHHHHHHHTTSSCSCEEEEECCCSHHHHHHH--SSSCH
T ss_pred CCEEEEEEEECCCCCCCCCCEEEEeCCcchhc---cC-cHH-HHHHHHHHhCCCCceEEeecccccccccccc--cCccH
Confidence 66666665433 3458999999843211 11 112 3334455554 33444443222110000 00111
Q ss_pred CCHHHHHHHHHHHHHH-cC----CCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCChhHHhhhhhhhHHHHh
Q 018916 100 LSVDDLADQIAEVLNH-FG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (349)
Q Consensus 100 ~~~~~~~~~l~~~l~~-l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (349)
.-.+.+.+++..+++. .. .+++.++|+||||..++.++.++|+++.+++.+++........
T Consensus 99 ~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~-------------- 164 (246)
T d3c8da2 99 DFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG-------------- 164 (246)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT--------------
T ss_pred HHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCC--------------
Confidence 1123334455555544 22 2568999999999999999999999999999999865432100
Q ss_pred cCcchhHHHHHHHhhcccccccCCCCCCchHHHHHHHHhhhhccchhHHHHHHHhcCCCChhhhccccCCceEEEEeCCC
Q 018916 175 YGMCGVVKELLLKRYFSKQEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 254 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D 254 (349)
.. . .....+.. ..........|+++.+|+.|
T Consensus 165 ----------------~~-~--------~~~~~~~~------------------------~~~~~~~~~~~~~l~~G~~D 195 (246)
T d3c8da2 165 ----------------GQ-Q--------EGVLLEKL------------------------KAGEVSAEGLRIVLEAGIRE 195 (246)
T ss_dssp ----------------SS-S--------CCHHHHHH------------------------HTTSSCCCSCEEEEEEESSC
T ss_pred ----------------cc-c--------hHHHHHHh------------------------hhhhhhccCCCeEEEecCCC
Confidence 00 0 00000000 00112244678999999999
Q ss_pred ccc-hhHHHHHHHhcccc--eeEEEEcCCCCc
Q 018916 255 PFH-SEAVHMTSKIDRRY--SALVEVQACGSM 283 (349)
Q Consensus 255 ~~~-~~~~~~~~~~~~~~--~~~~~i~~~gH~ 283 (349)
..+ ...+.+.+++...+ .++.+++| ||.
T Consensus 196 ~~~~~~~~~l~~~L~~~g~~~~~~~~~G-gH~ 226 (246)
T d3c8da2 196 PMIMRANQALYAQLHPIKESIFWRQVDG-GHD 226 (246)
T ss_dssp HHHHHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred cchhHHHHHHHHHHHHCCCCEEEEEeCC-CCC
Confidence 876 67778888887644 77888885 894
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.91 E-value=2.4e-08 Score=82.51 Aligned_cols=128 Identities=12% Similarity=0.041 Sum_probs=82.7
Q ss_pred CCCeeEEEEEc-cCCCCCeEEEecCCCCC--hhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCCCCCCC-----CC
Q 018916 27 TSHGSLSVTIY-GDQDKPALVTYPDLALN--YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD-----EP 98 (349)
Q Consensus 27 ~~~~~l~~~~~-g~~~~p~vv~lHG~~~~--~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~-----~~ 98 (349)
..+..+.+.+. +.+..|+|+++||.++. ...|.... .....+.+.++.|+.++..+.+......... ..
T Consensus 18 ~~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 94 (288)
T d1sfra_ 18 SMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINT---PAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQ 94 (288)
T ss_dssp TTTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHC---CHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEE
T ss_pred CCCcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhc---cHHHHHHhCCCEEEEeccCCCCCCccccCccccccccc
Confidence 35666766555 44577999999997654 22322111 1223344569999999987765433211100 01
Q ss_pred CCCHH-HHHHHHHHHH-HHcCC--CcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 99 VLSVD-DLADQIAEVL-NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 99 ~~~~~-~~~~~l~~~l-~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
....+ .+++++...+ +.+++ +++.+.|+||||..|+.++.++|+++.+++.+++.....
T Consensus 95 ~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~ 157 (288)
T d1sfra_ 95 TYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (288)
T ss_dssp CCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred chhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccc
Confidence 12233 3455665555 34443 579999999999999999999999999999999877543
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.90 E-value=3.2e-08 Score=81.39 Aligned_cols=126 Identities=10% Similarity=0.048 Sum_probs=81.6
Q ss_pred CCeeEEEEEccCCCCCeEEEecCCCC--ChhhhhcccccchhhhhhhcCCeEEEEECCCCCCCCCC-CC----CCCCCCC
Q 018916 28 SHGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AI----SDDEPVL 100 (349)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vv~lHG~~~--~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G~s~~-~~----~~~~~~~ 100 (349)
.+..+.+...+ ++.|+|+|+||.++ +...|.... .....+.+.++.|+.+|-...+.... .. .......
T Consensus 16 ~~r~i~~~~~~-~~~p~lyllhG~~g~~d~~~W~~~~---~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~ 91 (280)
T d1dqza_ 16 MGRDIKVQFQG-GGPHAVYLLDGLRAQDDYNGWDINT---PAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTY 91 (280)
T ss_dssp TTEEEEEEEEC-CSSSEEEECCCTTCCSSSCHHHHHS---CHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCC
T ss_pred CCCcceEEeeC-CCCCEEEECCCCCCCCccchhhhcc---hHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcch
Confidence 45566666655 46789999999764 334442211 22234556799999999533221110 00 0111223
Q ss_pred CHHH-HHHHHHHHHHH-c--CCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCC
Q 018916 101 SVDD-LADQIAEVLNH-F--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (349)
Q Consensus 101 ~~~~-~~~~l~~~l~~-l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (349)
..++ +++++..+++. + +-+++.+.|+||||+.|+.+|.++|+++.+++.+++.....
T Consensus 92 ~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 92 KWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp BHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcc
Confidence 4444 45677766643 3 33578999999999999999999999999999999887543
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.82 E-value=5.2e-07 Score=74.26 Aligned_cols=112 Identities=14% Similarity=0.105 Sum_probs=68.5
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCCCC----------------CCCCCCCC---CCCCCCH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE----------------FGAAAISD---DEPVLSV 102 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G~G----------------~s~~~~~~---~~~~~~~ 102 (349)
-|+|.++||.+++...|.... .........+..|+.++....+ .+-..... ......+
T Consensus 49 yPVLYlLhG~~~~~~~w~~~~---~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~ 125 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPDNASEKA---FWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQM 125 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHS---CHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBH
T ss_pred CCEEEEcCCCCCCHHHHHHhh---hHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccch
Confidence 479999999999887764422 1112333457888888753321 11000000 0001223
Q ss_pred HH-HHHHHHHHHH-HcCC---------CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCCC
Q 018916 103 DD-LADQIAEVLN-HFGL---------GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKA 156 (349)
Q Consensus 103 ~~-~~~~l~~~l~-~l~~---------~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~ 156 (349)
++ +.+++..+++ .+.. ++..|.||||||.-|+.+|.+ +|++..++...++....
T Consensus 126 ~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~ 192 (299)
T d1pv1a_ 126 YDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNP 192 (299)
T ss_dssp HHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCCc
Confidence 33 4456655553 3433 468999999999999999986 58888888888876654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.67 E-value=5.7e-08 Score=82.37 Aligned_cols=108 Identities=12% Similarity=0.010 Sum_probs=75.1
Q ss_pred CCCeEEEecCCCCChhh-hhcccccch----hhhhhhcCCeEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMS-CFQGLFFCP----EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~-~~~~~~~~~----~~~~~l~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~ 115 (349)
++=||||+||+.+-+.. ...-.+|.- .-..+-.+|++|++...... .+.++-++.+...++.
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~-------------~S~~~RA~eL~~~I~~ 72 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL-------------SSNWDRACEAYAQLVG 72 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS-------------BCHHHHHHHHHHHHHC
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc-------------cCHHHHHHHHHHHHhh
Confidence 44589999998654321 111234542 33344578999999988665 3667778888777764
Q ss_pred c----C-------------------------CCcEEEEEechhHHHHHHHHHhhhc------------------------
Q 018916 116 F----G-------------------------LGAVMCMGVTAGAYILTLFAMKYRH------------------------ 142 (349)
Q Consensus 116 l----~-------------------------~~~v~lvGhS~Gg~ia~~~a~~~p~------------------------ 142 (349)
. | ..+|+||||||||..+-.++...|+
T Consensus 73 ~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (388)
T d1ku0a_ 73 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGH 152 (388)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCC
Confidence 2 1 1489999999999999988876543
Q ss_pred -ccceeEEecCCCCCCChhH
Q 018916 143 -RVLGLILVSPLCKAPSWTE 161 (349)
Q Consensus 143 -~v~~lvl~~~~~~~~~~~~ 161 (349)
.|.+|+-++++........
T Consensus 153 ~~V~SvTTIsTPH~GS~~AD 172 (388)
T d1ku0a_ 153 RFVLSVTTIATPHDGTTLVN 172 (388)
T ss_dssp CCEEEEEEESCCTTCCGGGG
T ss_pred cceEEEEeccCCCCCcchhh
Confidence 5999999999887654433
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=1.7e-05 Score=69.32 Aligned_cols=131 Identities=11% Similarity=0.071 Sum_probs=83.0
Q ss_pred EEeC-CCeeEEEEEccC----CCCCeEEEecCCCCChhhh--hcc---cccchh------hhhhhcCCeEEEEECCC-CC
Q 018916 24 LIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSC--FQG---LFFCPE------ACSLLLHNFCIYHINPP-GH 86 (349)
Q Consensus 24 ~i~~-~~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~--~~~---~~~~~~------~~~~l~~g~~vi~~D~~-G~ 86 (349)
++++ ++..+.|..+.. .++|+++.+-|.++.++.+ +.. ..+.+. -..-..+-.+++-+|.| |.
T Consensus 25 yl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGt 104 (452)
T d1ivya_ 25 YLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGV 104 (452)
T ss_dssp EEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTS
T ss_pred eeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCc
Confidence 4555 455788877653 3578999999988776554 111 101000 00112346789999986 99
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHH----HH---cCCCcEEEEEechhHHHHHHHHHhh----hcccceeEEecCCCC
Q 018916 87 EFGAAAISDDEPVLSVDDLADQIAEVL----NH---FGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCK 155 (349)
Q Consensus 87 G~s~~~~~~~~~~~~~~~~~~~l~~~l----~~---l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 155 (349)
|.|-.... ....+..+.++|+.+++ +. +...+++|.|-|+||..+-.+|... .-.++++++.++...
T Consensus 105 GfS~~~~~--~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 105 GFSYSDDK--FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp TTCEESSC--CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred ccccCCCC--CCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCccC
Confidence 99864321 22345566666655444 33 2346899999999999988887642 234889999988765
Q ss_pred C
Q 018916 156 A 156 (349)
Q Consensus 156 ~ 156 (349)
.
T Consensus 183 ~ 183 (452)
T d1ivya_ 183 Y 183 (452)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.55 E-value=1.2e-06 Score=71.20 Aligned_cols=125 Identities=10% Similarity=-0.029 Sum_probs=74.2
Q ss_pred eCCCeeEEEEEccCC----C--CCeEEEecCCCCChhhhhccc--c---cchhhhhhhcCCeEEEEECCCCCCCCCCCCC
Q 018916 26 KTSHGSLSVTIYGDQ----D--KPALVTYPDLALNYMSCFQGL--F---FCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (349)
Q Consensus 26 ~~~~~~l~~~~~g~~----~--~p~vv~lHG~~~~~~~~~~~~--~---~~~~~~~~l~~g~~vi~~D~~G~G~s~~~~~ 94 (349)
...++...+.++-|+ + -|+|+++||.+++...++... . ............+.|+.++..+.+...
T Consensus 33 ~~~~~~r~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---- 108 (273)
T d1wb4a1 33 TGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTA---- 108 (273)
T ss_dssp EETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCT----
T ss_pred ecCCCeEEEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCcc----
Confidence 334444455555432 2 378999999887654432111 0 001111222347888888877653211
Q ss_pred CCCCCCCHHHHHHHHHHHHH-H--------------cCCCcEEEEEechhHHHHHHHHHhhhcccceeEEecCCCCCCC
Q 018916 95 DDEPVLSVDDLADQIAEVLN-H--------------FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (349)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~l~-~--------------l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (349)
. .......+.+....+ . .+-+++.+.|+|+||..++.+|.++|+++.+++.+++......
T Consensus 109 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~~~ 183 (273)
T d1wb4a1 109 ---Q-NFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGN 183 (273)
T ss_dssp ---T-THHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCBSS
T ss_pred ---c-cchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccccCC
Confidence 1 112222222222221 1 1336799999999999999999999999999999998775543
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.41 E-value=9.2e-05 Score=63.85 Aligned_cols=129 Identities=11% Similarity=0.099 Sum_probs=81.3
Q ss_pred EEeCC--CeeEEEEEccC----CCCCeEEEecCCCCChhhh--hcc---cccchh-----hhhhhcCCeEEEEEC-CCCC
Q 018916 24 LIKTS--HGSLSVTIYGD----QDKPALVTYPDLALNYMSC--FQG---LFFCPE-----ACSLLLHNFCIYHIN-PPGH 86 (349)
Q Consensus 24 ~i~~~--~~~l~~~~~g~----~~~p~vv~lHG~~~~~~~~--~~~---~~~~~~-----~~~~l~~g~~vi~~D-~~G~ 86 (349)
+++++ +..++|..+.. ..+|.||.+-|.++.++.+ +.. +.+.+. -.....+-.+++-+| .-|.
T Consensus 20 yl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGt 99 (421)
T d1wpxa1 20 YLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNV 99 (421)
T ss_dssp EEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTS
T ss_pred eeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCC
Confidence 45553 45688876543 4578999999887776554 111 000000 011123457999999 5599
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHH----c-----CCCcEEEEEechhHHHHHHHHHhh---h---cccceeEEec
Q 018916 87 EFGAAAISDDEPVLSVDDLADQIAEVLNH----F-----GLGAVMCMGVTAGAYILTLFAMKY---R---HRVLGLILVS 151 (349)
Q Consensus 87 G~s~~~~~~~~~~~~~~~~~~~l~~~l~~----l-----~~~~v~lvGhS~Gg~ia~~~a~~~---p---~~v~~lvl~~ 151 (349)
|.|-.... ...+-.+.++|+.++++. + ...+++|.|-|+||..+..+|.+. . -.++++++.+
T Consensus 100 GfSy~~~~---~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGn 176 (421)
T d1wpxa1 100 GFSYSGSS---GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTCBCSSC---CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEES
T ss_pred CceecCCc---cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecC
Confidence 99964322 234556666666666532 2 235899999999999998887643 1 2477999999
Q ss_pred CCCC
Q 018916 152 PLCK 155 (349)
Q Consensus 152 ~~~~ 155 (349)
+...
T Consensus 177 g~~d 180 (421)
T d1wpxa1 177 GLTD 180 (421)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 8765
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.36 E-value=1.6e-06 Score=71.53 Aligned_cols=45 Identities=9% Similarity=0.098 Sum_probs=34.9
Q ss_pred cCCceEEEEeCCCccc--hhHHHHHHHhcc----cceeEEEEcCCCCcccc
Q 018916 242 LQCRSLIFVGESSPFH--SEAVHMTSKIDR----RYSALVEVQACGSMVTE 286 (349)
Q Consensus 242 i~~Pvlii~g~~D~~~--~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~ 286 (349)
.+.|+++++|++|..+ ..++.+.+.+.. .+++++..+++||...-
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 4679999999999999 556667776643 34788899999996654
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.12 E-value=9.2e-06 Score=65.50 Aligned_cols=34 Identities=12% Similarity=-0.051 Sum_probs=26.4
Q ss_pred CcEEEEEechhHHHHHHHHHhhhcccceeEEecCC
Q 018916 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (349)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (349)
.++.++|||+||..++.++. +++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~-~~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWL-SSSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHH-HCSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHH-cCcccCEEEEECCc
Confidence 45889999999999997655 55667787776654
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.10 E-value=0.00033 Score=61.33 Aligned_cols=115 Identities=11% Similarity=0.136 Sum_probs=71.3
Q ss_pred CCCeEEEecCCCCChhhh--hc---ccccchhh-----hhhhcCCeEEEEECCC-CCCCCCCCCC------CCCCCCCHH
Q 018916 41 DKPALVTYPDLALNYMSC--FQ---GLFFCPEA-----CSLLLHNFCIYHINPP-GHEFGAAAIS------DDEPVLSVD 103 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~--~~---~~~~~~~~-----~~~l~~g~~vi~~D~~-G~G~s~~~~~------~~~~~~~~~ 103 (349)
++|.||.+-|.++.++.+ +. ++.+.... ...-.+-.+++-+|.| |.|.|-.... ......+.+
T Consensus 66 ~~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~ 145 (483)
T d1ac5a_ 66 DRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLE 145 (483)
T ss_dssp SCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHH
Confidence 358999999987776543 11 11110000 0111246789999965 8999854321 111234667
Q ss_pred HHHHHHHHHHHH----c---CCCcEEEEEechhHHHHHHHHHhhh------------cccceeEEecCCCC
Q 018916 104 DLADQIAEVLNH----F---GLGAVMCMGVTAGAYILTLFAMKYR------------HRVLGLILVSPLCK 155 (349)
Q Consensus 104 ~~~~~l~~~l~~----l---~~~~v~lvGhS~Gg~ia~~~a~~~p------------~~v~~lvl~~~~~~ 155 (349)
+.++++.++++. + ...+++|.|-|+||..+-.+|...- -.++++.+.++...
T Consensus 146 ~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 146 DVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 777777666643 2 3368999999999999888876431 14788888877654
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.27 E-value=0.00069 Score=59.29 Aligned_cols=115 Identities=16% Similarity=0.081 Sum_probs=70.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCCCCCC--CCCCCCCCCHHHHHHHHHHH---H
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAA--ISDDEPVLSVDDLADQIAEV---L 113 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~~~--~~~~~~~~~~~~~~~~l~~~---l 113 (349)
..|++|+|||.+....+..... + .........+.-|+.+++|= +|.-..+ .......+.+.|+...+.=+ +
T Consensus 95 ~lPV~v~ihGG~~~~g~~~~~~-~-~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 172 (483)
T d1qe3a_ 95 NLPVMVWIHGGAFYLGAGSEPL-Y-DGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 172 (483)
T ss_dssp SEEEEEEECCSTTTSCCTTSGG-G-CCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCceEEEEeecccccCCccccc-c-ccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHH
Confidence 4589999999865533321111 1 11122334578999999884 2322110 01223356777776555433 3
Q ss_pred HHcCC--CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCCCC
Q 018916 114 NHFGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAP 157 (349)
Q Consensus 114 ~~l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~ 157 (349)
+.+|. ++|.|+|||.||..+..++... ...+.++|+.++.....
T Consensus 173 ~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~~ 220 (483)
T d1qe3a_ 173 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTM 220 (483)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCB
T ss_pred HHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcccc
Confidence 45554 5799999999999988766532 24799999999876543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.26 E-value=0.00041 Score=61.78 Aligned_cols=112 Identities=14% Similarity=0.074 Sum_probs=68.4
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHH---H
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEV---L 113 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~---l 113 (349)
..|++|+|||.+....+..... + ........++.-|+.+++| |+-.+.. .......+.+.|+...+.=+ +
T Consensus 111 ~lPV~v~ihGG~~~~gs~~~~~-~-~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~-~~~~~gN~Gl~Dq~~AL~WV~~nI 187 (542)
T d2ha2a1 111 PTPVLIWIYGGGFYSGAASLDV-Y-DGRFLAQVEGAVLVSMNYRVGTFGFLALPG-SREAPGNVGLLDQRLALQWVQENI 187 (542)
T ss_dssp CEEEEEEECCSTTTCCCTTSGG-G-CTHHHHHHHCCEEEEECCCCHHHHHCCCTT-CSSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEEEEECccccccCcccc-c-CchhhhhhccceeEeeeeeccceeeecccc-cccCCCcCCcccHHHHHHHHHHHH
Confidence 4489999999865322211111 1 1111223468999999999 4421111 11223456677776554433 3
Q ss_pred HHcCC--CcEEEEEechhHHHHHHHHHhh--hcccceeEEecCCCC
Q 018916 114 NHFGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (349)
Q Consensus 114 ~~l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (349)
..+|. ++|.|+|||.||..+..++... ...+.++|+.+....
T Consensus 188 ~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred HHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 45554 5799999999999998766643 246899999887654
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.0011 Score=58.65 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=69.0
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHc
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDEPVLSVDDLADQIAEV---LNHF 116 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~~~~~~~~~~~~~~~~~~~l~~~---l~~l 116 (349)
.|++|+|||.+....+.. . + ........++.-|+.+.+|= +|.-..+.......+.+.|+...+.=+ |..+
T Consensus 113 lPV~v~ihGG~~~~gs~~--~-~-~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 188 (532)
T d2h7ca1 113 LPVMVWIHGGGLMVGAAS--T-Y-DGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASF 188 (532)
T ss_dssp EEEEEEECCSTTTSCCST--T-S-CCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGG
T ss_pred cEEEEEEeCCcccccccc--c-C-CchhhhhcCceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHHh
Confidence 489999999876543321 1 2 11223456789999999884 332111111223456777776554433 3455
Q ss_pred CC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCC
Q 018916 117 GL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (349)
Q Consensus 117 ~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (349)
|. ++|.|+|||.||..+..++.. ....+.++|+.++...
T Consensus 189 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 189 GGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 54 579999999999988876653 3346889999887653
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0026 Score=56.10 Aligned_cols=113 Identities=14% Similarity=0.079 Sum_probs=68.5
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCC-CCCCCCCCCCCCCHHHHHHHHHHH---HH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEF-GAAAISDDEPVLSVDDLADQIAEV---LN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~-s~~~~~~~~~~~~~~~~~~~l~~~---l~ 114 (349)
..|++|+|||.+....+..... + .........+.-|+.+++|= +|. +..........+.+.|+...|.=+ ++
T Consensus 103 ~~PV~v~ihGG~~~~gs~~~~~-~-~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 180 (526)
T d1p0ia_ 103 NATVLIWIYGGGFQTGTSSLHV-Y-DGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIA 180 (526)
T ss_dssp SEEEEEEECCSTTTSCCTTCGG-G-CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCceEEEEECCCcccccCcccc-c-CccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHH
Confidence 4589999999876543332222 1 11112235588889999874 231 111111223456777776655433 34
Q ss_pred HcCC--CcEEEEEechhHHHHHHHHH--hhhcccceeEEecCCCC
Q 018916 115 HFGL--GAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCK 155 (349)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~ 155 (349)
.+|. ++|.|+|+|.||..+..... .....+.++|+.+....
T Consensus 181 ~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 181 AFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 5554 57999999999999875544 33456889898886654
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.84 E-value=0.00085 Score=59.54 Aligned_cols=111 Identities=14% Similarity=0.038 Sum_probs=63.3
Q ss_pred CCCeEEEecCCCCChhhh--hcccccchhhh--hhhcCCeEEEEECCCC--CCCCCCC--CCCCCCCCCHHHHHHHHHH-
Q 018916 41 DKPALVTYPDLALNYMSC--FQGLFFCPEAC--SLLLHNFCIYHINPPG--HEFGAAA--ISDDEPVLSVDDLADQIAE- 111 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~--~~~~~~~~~~~--~~l~~g~~vi~~D~~G--~G~s~~~--~~~~~~~~~~~~~~~~l~~- 111 (349)
..|++|+|||.+....+. +... ..+. .+..++.-|+++++|- +|.=..+ .......+.+.|+...+.=
T Consensus 113 ~~PVlv~ihGG~f~~g~~~~~~~~---~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV 189 (534)
T d1llfa_ 113 NLPVMLWIFGGGFEIGSPTIFPPA---QMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWV 189 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCH---HHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCCCCch---hccchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHH
Confidence 568999999987432221 1111 1111 2235789999999993 1211100 0011234566666654443
Q ss_pred --HHHHcCC--CcEEEEEechhHHHHHHHHH-hh----h---cccceeEEecCCC
Q 018916 112 --VLNHFGL--GAVMCMGVTAGAYILTLFAM-KY----R---HRVLGLILVSPLC 154 (349)
Q Consensus 112 --~l~~l~~--~~v~lvGhS~Gg~ia~~~a~-~~----p---~~v~~lvl~~~~~ 154 (349)
-+..+|. ++|.|+|||.||..+..... .. | ..+.++|+.++..
T Consensus 190 ~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 190 ADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 3344554 57999999999986654433 21 1 3589999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.84 E-value=0.00065 Score=60.48 Aligned_cols=113 Identities=21% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhh--hhhcCCeEEEEECCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHH--
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEAC--SLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEV-- 112 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~--~~l~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~~~~~l~~~-- 112 (349)
..|++|+|||.+....+....- -..... .....+.-|+++++| |+-.+..........+.+.|+...+.=+
T Consensus 121 ~lPV~V~ihGG~f~~G~~~~~~-~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 199 (544)
T d1thga_ 121 KLPVMVWIYGGAFVYGSSAAYP-GNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCC-SHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCccCCCccCC-cchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhh
Confidence 4589999999875543321100 001111 123568899999998 3311110000112346777776655443
Q ss_pred -HHHcCC--CcEEEEEechhHHHHHHHHHhh--------hcccceeEEecCCC
Q 018916 113 -LNHFGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (349)
Q Consensus 113 -l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 154 (349)
+..+|. ++|.|+|||.||..+..++... ...+.++|+.++..
T Consensus 200 nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 344554 5799999999998776555422 24789999999754
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=96.78 E-value=0.0019 Score=57.10 Aligned_cols=113 Identities=14% Similarity=0.067 Sum_probs=68.1
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCCCC-CCCCCCCCCCCHHHHHHHHHHH---HH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGA-AAISDDEPVLSVDDLADQIAEV---LN 114 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~-~~~~~~~~~~~~~~~~~~l~~~---l~ 114 (349)
..|++|+|||.+....+..... + ........++.-|+.+++|= +|.-. .........+.+.|+...+.=+ +.
T Consensus 105 ~lPV~v~ihGG~~~~g~~~~~~-~-~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 182 (532)
T d1ea5a_ 105 STTVMVWIYGGGFYSGSSTLDV-Y-NGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQ 182 (532)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG-G-CTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCcEEEEEEcCCcccccCCccc-c-CcchhhcccCccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHH
Confidence 4589999999764322211111 1 11123346688899999874 22111 1011223456777776555433 34
Q ss_pred HcCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCC
Q 018916 115 HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (349)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (349)
.+|. ++|.|+|||.||..+..++.. ....+.++|+.+....
T Consensus 183 ~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 183 FFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 4554 579999999999988866653 2346899999887654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.62 E-value=0.0016 Score=57.40 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=65.9
Q ss_pred CCeEEEecCCCCChhhhhcccccchhhhhhhcCCeEEEEECCCC--CCCCCCC--CCCCCCCCCHHHHHHHHHHH---HH
Q 018916 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAA--ISDDEPVLSVDDLADQIAEV---LN 114 (349)
Q Consensus 42 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~~~--~~~~~~~~~~~~~~~~l~~~---l~ 114 (349)
.|++|+|||.+....+.. .+...........+.-|+.+++|= +|.=... .......+.+.|+...+.=+ ++
T Consensus 97 ~PV~v~ihGG~~~~G~~~--~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~ 174 (517)
T d1ukca_ 97 LPVWLFIQGGGYAENSNA--NYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIE 174 (517)
T ss_dssp EEEEEEECCSTTTSCCSC--SCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGG
T ss_pred ceEEEEEcCCccccCCCc--cccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHH
Confidence 489999999865543321 112122122234567888999885 1211100 01112356777776655443 34
Q ss_pred HcCC--CcEEEEEechhHHHHHHHHHhh----hcccceeEEecCCCC
Q 018916 115 HFGL--GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCK 155 (349)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 155 (349)
.+|. ++|.|+|||.||..+....... ...+.++|+.++...
T Consensus 175 ~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 175 QFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 4554 5799999999998876554332 237899999987654
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.59 E-value=0.0024 Score=57.14 Aligned_cols=114 Identities=17% Similarity=0.063 Sum_probs=66.1
Q ss_pred CCCeEEEecCCCCChhhhh----cccccchhhhhhhcCCeEEEEECCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHH--
Q 018916 41 DKPALVTYPDLALNYMSCF----QGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDEPVLSVDDLADQIAEV-- 112 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~----~~~~~~~~~~~~l~~g~~vi~~D~~G--~G~s~~~~~~~~~~~~~~~~~~~l~~~-- 112 (349)
..|++|+|||.+....+.. ......+-.......+.-|+.+++|= +|.-..........+.+.|+...+.=+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~ 176 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhh
Confidence 3489999999865332211 11100011111223468888999883 221111112223457777777655444
Q ss_pred -HHHcCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCC
Q 018916 113 -LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (349)
Q Consensus 113 -l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 154 (349)
|..+|. ++|.|+|||.||..+..+... ....+.++|+.+...
T Consensus 177 nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 344554 579999999999988866553 345699999998654
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.37 E-value=0.0036 Score=49.61 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHh
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
+.++++.....++++.|||+||.+|..+|..
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3334444455689999999999999988764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.30 E-value=0.0044 Score=48.96 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=24.3
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
.+..+++.....++++.|||+||.+|..++...
T Consensus 114 ~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l 146 (261)
T d1uwca_ 114 LVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCcceEEeccchhHHHHHHHHHHH
Confidence 334444444556899999999999999877653
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.25 E-value=0.0033 Score=49.92 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=24.4
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHh
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (349)
.+.++++.....++++.|||+||.+|..+|..
T Consensus 121 ~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 121 TVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 33444455556789999999999999987764
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.08 E-value=0.0034 Score=49.96 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=23.6
Q ss_pred HHHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
+..+++.....++++.|||+||.+|..++...
T Consensus 127 i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 127 LKEVVAQNPNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHHhCCCceEEEeccchHHHHHHHHHHHH
Confidence 33344444456899999999999999887754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.05 E-value=0.0072 Score=47.94 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=24.4
Q ss_pred HHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh
Q 018916 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140 (349)
Q Consensus 108 ~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (349)
.+..+++.....++++.|||+||.+|..++...
T Consensus 127 ~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 127 KVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 334444444556899999999999999888754
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.70 E-value=0.01 Score=52.71 Aligned_cols=113 Identities=16% Similarity=0.037 Sum_probs=65.8
Q ss_pred CCCeEEEecCCCCChhhhhcccccchhhhhhh-cCCeEEEEECCCC--CCCCC-------CCCCCCCCCCCHHHHHHHHH
Q 018916 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPG--HEFGA-------AAISDDEPVLSVDDLADQIA 110 (349)
Q Consensus 41 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~l-~~g~~vi~~D~~G--~G~s~-------~~~~~~~~~~~~~~~~~~l~ 110 (349)
..|++|+|||.+....+..... +.. ..+. ..+.-|+++++|= +|.=. .........+.+.|+...+.
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~-~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDI-YNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG-GCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCccCCCCcccc-cch--hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 4589999999865432222111 111 1233 3357778888773 12110 00011234577777776654
Q ss_pred HHH---HHcCC--CcEEEEEechhHHHHHHHHHh--hhcccceeEEecCCCCC
Q 018916 111 EVL---NHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKA 156 (349)
Q Consensus 111 ~~l---~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~ 156 (349)
=+- ..+|. ++|.|+|||.||..+...... ....+.++|+.+.....
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~~ 267 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMNA 267 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTTS
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccccC
Confidence 433 34454 579999999999988766543 23468888888876543
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=93.35 E-value=0.18 Score=37.39 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=51.6
Q ss_pred CCeEEEEECCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHhh----hcccceeE
Q 018916 74 HNFCIYHINPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLI 148 (349)
Q Consensus 74 ~g~~vi~~D~~G~G~s~-~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lv 148 (349)
....+..++++-..... .............++...+.++.+.--..+++|+|+|.|+.|+-..+... .++|.+++
T Consensus 50 ~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avv 129 (197)
T d1cexa_ 50 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTV 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEE
T ss_pred CcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEE
Confidence 45667777765431110 00001111123556666666666666567999999999999999887753 45799999
Q ss_pred EecCCCC
Q 018916 149 LVSPLCK 155 (349)
Q Consensus 149 l~~~~~~ 155 (349)
+++-+..
T Consensus 130 lfGDP~~ 136 (197)
T d1cexa_ 130 LFGYTKN 136 (197)
T ss_dssp EESCTTT
T ss_pred EEeCCCC
Confidence 9885543
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=91.47 E-value=0.34 Score=36.16 Aligned_cols=79 Identities=18% Similarity=0.022 Sum_probs=48.4
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCCCC--C----HHHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh--------
Q 018916 74 HNFCIYHINPPGHEFGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-------- 139 (349)
Q Consensus 74 ~g~~vi~~D~~G~G~s~~~~~~~~~~~--~----~~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-------- 139 (349)
.+-.+..+++|..-... ......| + ..++...|....++-.-.+++|+|+|.|+.|+-..+..
T Consensus 34 ~~~~~~~v~YPA~~~~~---~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~ 110 (207)
T d1qoza_ 34 PGTTSEAIVYPACGGQA---SCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGI 110 (207)
T ss_dssp TTEEEEECCSCCCSSCG---GGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTB
T ss_pred CCCeEEEeeeccccccc---ccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCcccccc
Confidence 36778889998863221 0111111 1 33344444444455445799999999999999887642
Q ss_pred ----------hhcccceeEEecCCCC
Q 018916 140 ----------YRHRVLGLILVSPLCK 155 (349)
Q Consensus 140 ----------~p~~v~~lvl~~~~~~ 155 (349)
..++|.+++|++-+..
T Consensus 111 ~~~~~~l~~~~~~~V~avvl~GdP~~ 136 (207)
T d1qoza_ 111 TNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp CCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred ccCCCCCChhhhhcEEEEEEEeCCCC
Confidence 1246888888874443
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=91.13 E-value=0.38 Score=35.93 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=46.9
Q ss_pred CeEEEEECCCCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHh-----------
Q 018916 75 NFCIYHINPPGHEFGAAAISDDEPVLSV----DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK----------- 139 (349)
Q Consensus 75 g~~vi~~D~~G~G~s~~~~~~~~~~~~~----~~~~~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~----------- 139 (349)
+..+..+++|........ .......+. .++.+.|.+..++-...+++|+|+|.|+.|+-.++..
T Consensus 35 ~~~~~~v~YpA~~~~~~~-~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~ 113 (207)
T d1g66a_ 35 GSTAEAINYPACGGQSSC-GGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNT 113 (207)
T ss_dssp TCEEEECCCCCCSSCGGG-TSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCC
T ss_pred CCeeEEeccccccccccc-ccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCcccccccc
Confidence 678888999875321100 000001122 2334444444444455789999999999999877642
Q ss_pred -------hhcccceeEEecCCCC
Q 018916 140 -------YRHRVLGLILVSPLCK 155 (349)
Q Consensus 140 -------~p~~v~~lvl~~~~~~ 155 (349)
..++|.++++++-+..
T Consensus 114 ~~~l~~~~~~~v~avvl~GdP~~ 136 (207)
T d1g66a_ 114 AVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp SCCSCHHHHHHEEEEEEESCTTC
T ss_pred ccCCCchhhhceeeEEEecCCCc
Confidence 2246777887775543
|