Citrus Sinensis ID: 018922

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEccEEcccccccEEcccccccccccEEEccccHHcHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHcccccccccccccccccEEEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHccEEEEccccccccHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccEEEEcccccccEEcccccHHHHHHHHHHHHHHccccccccccEEEEEcccHHHHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEEEccEEEccccccEEEEEccccccEEEEEEcccHHHHHHHHHHHHHHccccHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHcHHHHHHHHHHHHHHHHHHccEEEEcccccEEEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEccEccccHHHHHHccccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEcccccHHHHHHHHHHHHHcccccccccccEEEEEHHHHHHHHHHHHHHcccccEcccccccccEccccccc
Coil and Loop (DISEMBL)
megslsngsckslfkmpeikftKLFIngefvdsvsgktfetidprTGEAIARIAEGDKEDVDLAVKAARQafdhgpwprfsgaerRGIMLKFADLIEEHAEVLAVLEALdagklhswakmgdipgaaNTLRYYAGAADKIHGEVLKMSRALqgytlrepigvvghiipwnfpttmffmkvspalaagctmivkpaeqtPLIALYFAHLAKlagvpdgvlnvvpgfgptagaaiashmdidkvsftgstDVGRQVMQAAatsnlkpvslelggkspllifddvdvnTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAwvvgdpfdpavrqgpqvlic
Flexible Loop (DISEMBL)
megslsngsckslFKMPEIKFTKLFINGEfvdsvsgktfetidprtGEAIARIAEGDKEDVDLAVKAArqafdhgpwprfsgaERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAatsnlkpvsLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWvvgdpfdpavrqgpqvlic
Low Complexity Region (SEG)
MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADlieehaevlavlealdaGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC
Disordered region (IsUnstruct)
***********SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA**********
Disordered Region (DISOPRED)
********SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC
Disordered Region (DISEMBL)
*********CKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC
Disordered Region (DISPRO)
**********KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ*P*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
Q56YU0	501	Aldehyde dehydrogenase fa	yes	no	0.979	0.682	0.727	1e-146
Q9SU63	538	Aldehyde dehydrogenase fa	no	no	0.942	0.611	0.565	1e-107
P27463	509	Retinal dehydrogenase 1 O	yes	no	0.942	0.646	0.548	1e-103
P86886	500	Retinal dehydrogenase 1 O	N/A	no	0.942	0.658	0.545	1e-102
P00352	501	Retinal dehydrogenase 1 O	yes	no	0.942	0.656	0.539	1e-102
Q8MI17	496	Retinal dehydrogenase 1 O	yes	no	0.942	0.663	0.554	1e-102
P51977	501	Retinal dehydrogenase 1 O	N/A	no	0.942	0.656	0.545	1e-102
P48644	501	Retinal dehydrogenase 1 O	yes	no	0.942	0.656	0.545	1e-102
P24549	501	Retinal dehydrogenase 1 O	yes	no	0.942	0.656	0.539	1e-101
Q8HYE4	501	Retinal dehydrogenase 1 O	N/A	no	0.942	0.656	0.533	1e-101

>sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2

 Score =  518 bits (1333), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 251/345 (72%), Positives = 287/345 (83%), Gaps = 3/345 (0%)

Query: 5   LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
           + NG C   +  K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVD
Sbjct: 1   MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVD 60

Query: 63  LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD 122
           LAV AAR AFDHGPWPR +G ER  ++ KFADLIEE+ E LA L+A+D GKL    K  D
Sbjct: 61  LAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYAD 120

Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
           IP  A   RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF  KV+
Sbjct: 121 IPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVA 180

Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
           PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DK
Sbjct: 181 PAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDK 240

Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
           VSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG  +NKGE
Sbjct: 241 VSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGE 300

Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           ICVASSRV+VQEGIYD+  +KLVEKAK W VGDPFD   RQGPQV
Sbjct: 301 ICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQV 345

Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1

 Score =  389 bits (999), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/329 (56%), Positives = 234/329 (71%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
           ++  T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPW
Sbjct: 54  QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPW 113

Query: 78  PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
           P+ S  ER  ++L+FADL+E+H+E LA LE  D GK +  +   +IP  A   RYYAG A
Sbjct: 114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173

Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
           DKIHG  +      Q +TL EPIGV G IIPWNFP  MF  KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233

Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
           TPL A Y   L   AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++  
Sbjct: 234 TPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGL 293

Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           AA SNLKPV+LELGGKSP ++F+D D++ A ++A   + FN+G+ C A SR +V E +YD
Sbjct: 294 AANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYD 353

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           EF +K   +A   VVGDPF   + QGPQ+
Sbjct: 354 EFVEKSKARALKRVVGDPFRKGIEQGPQI 382

Possesses activity on acetaldehyde and glycolaldehyde in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1

 Score =  374 bits (961), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 181/330 (54%), Positives = 237/330 (71%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +IK+TK+FIN E+ DSVSGK FE  +P   E I  +AEGDK D+D AVKAAR+AF+ G P
Sbjct: 25  KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSP 84

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADL+E     LA +EA+D GKL S A + D+     T+RY AG 
Sbjct: 85  WRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGW 144

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKIHG  + M      +T  EP+GV G IIPWNFP  MF  K++PAL  G T++VKPAE
Sbjct: 145 ADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAE 204

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL ALY   L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +
Sbjct: 205 QTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKE 264

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IY
Sbjct: 265 AAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIY 324

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ +E+AK + +GDP  P V+QGPQ+
Sbjct: 325 DEFVRRSIERAKKYTLGDPLLPGVQQGPQI 354

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1

 Score =  373 bits (958), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/330 (54%), Positives = 238/330 (72%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +I++TK+FIN E+ DSVSGK F  I+P T E I  + EGDK D+D AVKAARQAF  G P
Sbjct: 16  KIQYTKIFINNEWHDSVSGKKFPVINPATEEVICHVEEGDKADIDKAVKAARQAFQIGSP 75

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADL+E    +LA LEA + GK+ + + + D+ G    L+Y AG 
Sbjct: 76  WRTMDASERGRLLYKLADLMERDRLLLATLEATNGGKVFASSYLFDLGGCIKALKYCAGW 135

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADK+HG+ +     +  YT REPIGV G IIPWNFP  MF  K+ PAL  G T+IVKPAE
Sbjct: 136 ADKVHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPLLMFIWKIGPALGCGNTVIVKPAE 195

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL ALY A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST VG+ + +
Sbjct: 196 QTPLTALYMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTQVGKLIKE 255

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK V+LELGGKSP ++F D D++TA + A  G+ +++G+ CVA+SR++V+E IY
Sbjct: 256 AAGKSNLKRVTLELGGKSPCIVFADADLDTAVEFAHYGVFYHQGQCCVAASRLFVEESIY 315

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +V+G+P +  + QGPQ+
Sbjct: 316 DEFVRRSVERAKKYVLGNPLNSGINQGPQI 345

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Mesocricetus auratus (taxid: 10036)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2

 Score =  373 bits (957), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/330 (53%), Positives = 238/330 (72%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +I++TK+FIN E+ DSVSGK F   +P T E + ++ EGDKEDVD AVKAARQAF  G P
Sbjct: 17  KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSP 76

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADLIE    +LA +E+++ GKL+S A + D+ G   TLRY AG 
Sbjct: 77  WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK V+LELGGKSP ++  D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +++G+P  P V QGPQ+
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGVTQGPQI 346

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1

 Score =  373 bits (957), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/330 (55%), Positives = 237/330 (71%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +I++TK+FIN E+ DSVSGK F  ++P T E I  I EGDK DVD AVKAARQAF  G P
Sbjct: 12  KIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSP 71

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADLIE    +LA +E+L+AGKL   A + D+ G   TLRY AG 
Sbjct: 72  WRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGW 131

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + M      YT  EP+GV G IIPWNFP  M   K+ PAL+ G T+IVKPAE
Sbjct: 132 ADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAE 191

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 192 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 251

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK V+LELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct: 252 AAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 311

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct: 312 DEFVRRSVERAKKYVLGNPLAPEVNQGPQI 341

Can convert/oxidize retinaldehyde to retinoic acid.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/330 (54%), Positives = 235/330 (71%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G P
Sbjct: 17  QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADLIE    +LA +EA++ GKL S A + D+ G   TLRY AG 
Sbjct: 77  WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK VSLELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3

 Score =  372 bits (955), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/330 (54%), Positives = 235/330 (71%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G P
Sbjct: 17  QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADLIE    +LA +EA++ GKL S A + D+ G   TLRY AG 
Sbjct: 77  WRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK VSLELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5

 Score =  370 bits (949), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/330 (53%), Positives = 238/330 (72%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +I+ TK+FIN E+ +SVSGK F  ++P T E I  + EGDK DVD AVKAARQAF  G P
Sbjct: 17  KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADL+E    +LA +EAL+ GK+ + A + D+ G    L+Y AG 
Sbjct: 77  WRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGW 136

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKIHG+ +     +  YT REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAE 196

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct: 197 QTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK V+LELGGKSP ++F D D++ A + A  G+ +++G+ CVA+SR++V+E +Y
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF K+ VE+AK +V+G+P  P + QGPQ+
Sbjct: 317 DEFVKRSVERAKKYVLGNPLTPGINQGPQI 346

In addition to the activity on acetaldehyde and related substrates, is also involved in the oxidation of aldehydes derived from biogenic amines such as epinephrine and norepinephrine, as well as the aldehydes generated via lipid peroxidation. Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|Q8HYE4|AL1A1_MACFA Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/330 (53%), Positives = 236/330 (71%), Gaps = 1/330 (0%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +I++TK+FIN E+ DSVSGK F   +P T E + ++ EGDK DVD AVKAARQAF  G P
Sbjct: 17  KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSP 76

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K ADLIE    +LA +E+++ GKL+S A + D+ G   TLRY AG 
Sbjct: 77  WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK V+LELGGKSP ++  D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +++G+P  P   QGPQ+
Sbjct: 317 DEFVRRSVERAKKYILGNPLTPGATQGPQI 346

Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
255546541	501	aldehyde dehydrogenase, putative [Ricinu	0.977	0.680	0.829	1e-165
356520525	501	PREDICTED: aldehyde dehydrogenase family	0.982	0.684	0.787	1e-158
255546535	501	aldehyde dehydrogenase, putative [Ricinu	0.977	0.680	0.780	1e-157
356531249	501	PREDICTED: aldehyde dehydrogenase family	0.982	0.684	0.778	1e-156
197312909	500	alcohol dehydrogenase [Rheum australe]	0.977	0.682	0.782	1e-155
356513129	502	PREDICTED: aldehyde dehydrogenase family	0.982	0.683	0.750	1e-153
356523743	501	PREDICTED: aldehyde dehydrogenase family	0.982	0.684	0.763	1e-152
357518719	503	Aldehyde dehydrogenase [Medicago truncat	0.974	0.675	0.755	1e-151
449525465	507	PREDICTED: aldehyde dehydrogenase family	0.977	0.672	0.769	1e-150
388495142	497	unknown [Lotus japonicus]	0.939	0.659	0.777	1e-150

>gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis]

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/341 (82%), Positives = 309/341 (90%)

Query: 6   SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
           SNGS +S  K+P IKFTKLFINGEFVDS SGKTFETIDPRTGEAIARIAEGDKED++LAV
Sbjct: 5   SNGSSESFIKIPTIKFTKLFINGEFVDSFSGKTFETIDPRTGEAIARIAEGDKEDIELAV 64

Query: 66  KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
           KA+R+AFDHGPWPR SG+ R  IM++FADLI+E+ E LA L+ +D GKL S  K  DIP 
Sbjct: 65  KASREAFDHGPWPRLSGSARARIMMRFADLIDENKEELAALDTIDGGKLFSGGKTVDIPS 124

Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
           AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP+ MFFMKV+PALA
Sbjct: 125 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPSLMFFMKVAPALA 184

Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
           AGCT IVKPAEQTPL AL++AHLAKLAG+PDGVLNVV G+GPTAGAAIASHMDID VSFT
Sbjct: 185 AGCTTIVKPAEQTPLSALFYAHLAKLAGLPDGVLNVVTGYGPTAGAAIASHMDIDMVSFT 244

Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
           GST+VGR+VMQAAATSNLK VSLELGGKSPLLIFDD D+NTA+D+AL GIL+NKGE+CVA
Sbjct: 245 GSTEVGRKVMQAAATSNLKQVSLELGGKSPLLIFDDADINTASDLALFGILYNKGEVCVA 304

Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           SSRVYVQEGIYDE  KKLVEKAKAWVVGDPFDP V QGPQV
Sbjct: 305 SSRVYVQEGIYDEIVKKLVEKAKAWVVGDPFDPKVHQGPQV 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 270/343 (78%), Positives = 303/343 (88%)

Query: 4   SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
           +LSNG   S FKMP IKFTKLFINGEFVDS+SGK FETIDPRTGE I RIAEG KED+D+
Sbjct: 3   ALSNGHDASFFKMPSIKFTKLFINGEFVDSLSGKEFETIDPRTGEVITRIAEGAKEDIDV 62

Query: 64  AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
           AVKAAR AFD+GPWPR  GAER  IM+K+ADLI+++ E +A L+A+DAGKL+ W K  DI
Sbjct: 63  AVKAARDAFDYGPWPRMPGAERAKIMMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDI 122

Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
           P AANT+RYYAGAADKIHGEVLK SR    YTL EPIGVVGHIIPWNFP+TMF  KVSP+
Sbjct: 123 PAAANTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPS 182

Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
           LAAGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAGAAI+SHMDIDKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVS 242

Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
           FTGST+VGR+VM+AAA SNLKPVSLELGGKSP+++FDD DV+ AA +AL+GILFNKGEIC
Sbjct: 243 FTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAGLALMGILFNKGEIC 302

Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           VA SRV VQEGIYDEFEKKLVEKA AWVVGDPFDP V+QGPQV
Sbjct: 303 VAGSRVLVQEGIYDEFEKKLVEKANAWVVGDPFDPKVQQGPQV 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546535|ref|XP_002514327.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546783|gb|EEF48281.1| aldehyde dehydrogenase, putative [Ricinus communis]

 Score =  559 bits (1440), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 266/341 (78%), Positives = 299/341 (87%)

Query: 6   SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
           SN    S FK+P+IKFTKLFINGEFVDS+SGKTFET+DPR+GE I R+A+GDK DVDLAV
Sbjct: 5   SNERSDSFFKIPKIKFTKLFINGEFVDSISGKTFETVDPRSGEVITRVAQGDKGDVDLAV 64

Query: 66  KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
           KAAR AFD+GPWPR SG  R  I+++FAD+IEEH E LA ++ +DAGKL +  K  DIP 
Sbjct: 65  KAARHAFDNGPWPRMSGFARGRILMEFADIIEEHIEELAAIDTIDAGKLFTMGKAADIPM 124

Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
           A N LRYYAGAADKIHG+VLKMSR LQGYTL EP+GVVGHIIPWNFPT MFFMKV+PALA
Sbjct: 125 AINLLRYYAGAADKIHGQVLKMSRELQGYTLHEPVGVVGHIIPWNFPTNMFFMKVAPALA 184

Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
           AGCTM+VKPAEQTPL ALY+AHLAK AG+PDGV+NV+ GFGPTAGAAIASHMDIDKVSFT
Sbjct: 185 AGCTMVVKPAEQTPLSALYYAHLAKQAGIPDGVINVITGFGPTAGAAIASHMDIDKVSFT 244

Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
           GST+VGR++MQAAATSNLK VSLELGGKSPLLIFDD D++TA D+ALLGIL+NKGE+CVA
Sbjct: 245 GSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADIDTAVDLALLGILYNKGEVCVA 304

Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           SSRVYVQEGIYDE  KKL +KAK WVVGDPFDP  R GPQV
Sbjct: 305 SSRVYVQEGIYDELVKKLEKKAKDWVVGDPFDPISRLGPQV 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 267/343 (77%), Positives = 302/343 (88%)

Query: 4   SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
           +LSNG   S FKMP IKFTKLFINGEFVDS+SG+ FET DPRTGE I RIAEG KEDVD+
Sbjct: 3   ALSNGHGSSFFKMPPIKFTKLFINGEFVDSLSGREFETRDPRTGEVITRIAEGAKEDVDV 62

Query: 64  AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
           AVKAAR AFD+GPWPR  GAER  IM+K+ADL++++ E +A L+A+DAGKL+ W K  DI
Sbjct: 63  AVKAARAAFDYGPWPRMPGAERAKIMMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDI 122

Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
           P AA+T+RYYAGAADKIHGEVLK SR    YTL EPIGVVGHIIPWNFP+TMF  KVSP+
Sbjct: 123 PAAASTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPS 182

Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
           LAAGCTM++KPAEQTPL AL++AHLAKLAG+PDGVLNVVPGFG TAG AI+ HMDIDKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVS 242

Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
           FTGST+VGR+VM+AAA SNLKPVSLELGGKSP+++FDD DV+ AA++ALLGILFNKGEIC
Sbjct: 243 FTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAELALLGILFNKGEIC 302

Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           VA SRV VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQV
Sbjct: 303 VAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQV 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|197312909|gb|ACH63235.1| alcohol dehydrogenase [Rheum australe]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 267/341 (78%), Positives = 299/341 (87%)

Query: 6   SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
           SNG  +  F++PEIKFTKLFINGEFVDSVSGKTFET DPR GE IA +AEGDKEDVDLAV
Sbjct: 4   SNGKTEIKFQLPEIKFTKLFINGEFVDSVSGKTFETRDPRNGEVIAEVAEGDKEDVDLAV 63

Query: 66  KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
           KAAR+AFDHGPWPR SG +R  IM+K ADLIE+H E LA ++++DAGKL    K+ DIPG
Sbjct: 64  KAAREAFDHGPWPRMSGYQRGRIMMKLADLIEQHLEELAAIDSMDAGKLFHIGKIIDIPG 123

Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
           AA+TLRYYAGAADKIHGE LKMSR  QGYTLREP GVVGHIIPWNFPTTMFF KV+PALA
Sbjct: 124 AAHTLRYYAGAADKIHGETLKMSREFQGYTLREPAGVVGHIIPWNFPTTMFFAKVAPALA 183

Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
           AGCTM+VKPAEQTPL ALY+AHLA LAG+P+GVLNVV GFGPTAGAA+ SHMD+DKVSFT
Sbjct: 184 AGCTMVVKPAEQTPLSALYYAHLANLAGIPEGVLNVVSGFGPTAGAALTSHMDVDKVSFT 243

Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
           GS +VGR VMQAAATSNLK VSLELGGKSPL+IFDD DV+ AA++AL+GILFNKGE+CVA
Sbjct: 244 GSPEVGRLVMQAAATSNLKQVSLELGGKSPLIIFDDADVDKAAELALVGILFNKGEVCVA 303

Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           SSRV+VQ GIYD   +KLVE AK W VGDPFDP+V+QGPQV
Sbjct: 304 SSRVFVQGGIYDAVVEKLVEMAKNWPVGDPFDPSVQQGPQV 344

Source: Rheum australe

Species: Rheum australe

Genus: Rheum

Family: Polygonaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max]

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/345 (75%), Positives = 304/345 (88%), Gaps = 2/345 (0%)

Query: 4   SLSNG--SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDV 61
           + +NG  +  SL K+P + FTKLFI+G FV SVSGKTFETIDPRTG+ IARI+EGDKED+
Sbjct: 2   TFNNGDAAAASLNKVPTVNFTKLFIDGHFVHSVSGKTFETIDPRTGDVIARISEGDKEDI 61

Query: 62  DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121
           D+AVKAAR AFD+GPWPR  G+ER  I+LK+A+LIEE+AE LA L+A+DAGKL+   +  
Sbjct: 62  DIAVKAARHAFDNGPWPRLPGSERGRILLKWAELIEENAEELAALDAIDAGKLYHMCRNL 121

Query: 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
           ++P AANTLRYYAGAADKIHGEVLKMSR    YTL EP+GVVGHI PWNFP TMF++KV+
Sbjct: 122 EVPAAANTLRYYAGAADKIHGEVLKMSRDFHAYTLLEPLGVVGHITPWNFPNTMFYIKVA 181

Query: 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
           P+LAAGCTM++KPAEQTPL AL+ AHLAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DK
Sbjct: 182 PSLAAGCTMVLKPAEQTPLSALFNAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDK 241

Query: 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
           VSFTGST  GR++MQAAA SNLK VSLELGGKSPL+IFDD D++ AA++ALLGIL+NKGE
Sbjct: 242 VSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAAELALLGILYNKGE 301

Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +CVASSRV VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQV
Sbjct: 302 VCVASSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQV 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523743|ref|XP_003530494.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 262/343 (76%), Positives = 306/343 (89%)

Query: 4   SLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDL 63
           SL+NG   SL K+P IKFTKLFING+FVDS+SGKTFETIDPRTG+ IARI+EGDKED+D+
Sbjct: 3   SLTNGDAGSLNKVPTIKFTKLFINGDFVDSLSGKTFETIDPRTGDVIARISEGDKEDIDI 62

Query: 64  AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDI 123
           AVKAAR AFD+GPWPR  G+ER  I+LK+A++IEE+AE LA L+A+DAGKL+   +  ++
Sbjct: 63  AVKAARHAFDNGPWPRLPGSERARILLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEV 122

Query: 124 PGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183
           P AANTLRYYAGAADKIHGEVLKMSR    YTL EP+GVVGHI PWNFP TMF++KV+P+
Sbjct: 123 PAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPS 182

Query: 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 243
           LAAGCTM++KPAEQTPL AL+ AHLAKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVS
Sbjct: 183 LAAGCTMVLKPAEQTPLSALFSAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVS 242

Query: 244 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEIC 303
           FTGST  GR +MQAAA SNLK VSLELGGKSPL+IFDD D++ A ++ALLGIL+NKGE+C
Sbjct: 243 FTGSTQTGRVIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKATELALLGILYNKGEVC 302

Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           VASSRV+VQEGIYDEFEKKLVEKAKAWVVGDPFDP V+QGPQV
Sbjct: 303 VASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQV 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518719|ref|XP_003629648.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521043|ref|XP_003630810.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523670|gb|AET04124.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524832|gb|AET05286.1| Aldehyde dehydrogenase [Medicago truncatula]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/340 (75%), Positives = 295/340 (86%)

Query: 6   SNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAV 65
           SNG   SLFKMP IK+ KLFING+FVDSVSG TFETIDPRTG+ IARI+EG KED+++AV
Sbjct: 7   SNGDNSSLFKMPTIKYNKLFINGDFVDSVSGSTFETIDPRTGDVIARISEGAKEDIEIAV 66

Query: 66  KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
           KAAR+AFD GPWPR SG ER  IM+KFA+LI+E+ E LA L+A+DAGK++   K  +IP 
Sbjct: 67  KAAREAFDSGPWPRMSGVERAKIMMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPS 126

Query: 126 AANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
           AANTLRYYAGAADKIHGEVLK S     YTL EPIGVVGHIIPWN PT +FF KVSP+LA
Sbjct: 127 AANTLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLA 186

Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
           AGCTM++KPAEQTPL AL++AHLAKLAG+P+GVLNVVPGFGPTAGAAI+SHMDID VSFT
Sbjct: 187 AGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFT 246

Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
           GS +VGR++MQAAA SNLK VSLELGGKSPL+IFDD D++ A ++ALLGIL NKGEICVA
Sbjct: 247 GSVEVGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADIDKAVELALLGILANKGEICVA 306

Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            SRV+VQEGIYD+ EKKLVEKAKAWV+GDPFDP  +QGPQ
Sbjct: 307 CSRVFVQEGIYDQVEKKLVEKAKAWVIGDPFDPKTQQGPQ 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525465|ref|XP_004169738.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Cucumis sativus]

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/342 (76%), Positives = 294/342 (85%), Gaps = 1/342 (0%)

Query: 6   SNG-SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLA 64
           SNG +  S   +P+IKFTKLFINGEFVDSVSGKTF+TIDPRT + IA +A GDKEDVDLA
Sbjct: 10  SNGKNSDSHPNIPQIKFTKLFINGEFVDSVSGKTFDTIDPRTEQVIATVAAGDKEDVDLA 69

Query: 65  VKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIP 124
           VKAARQAFDHGPWPR SGAER  IM K A LI+EH E +A L+ +DAGKL    K+ DIP
Sbjct: 70  VKAARQAFDHGPWPRMSGAERGRIMTKLAGLIDEHKEEVAALDTIDAGKLFVLGKIMDIP 129

Query: 125 GAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
           GAANTLRYYAGAADK HGEVLKMS+ L GYTL EPIGVVGHIIPWNFPTTMF++KVSPAL
Sbjct: 130 GAANTLRYYAGAADKFHGEVLKMSKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPAL 189

Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
           AAGCTMIVKPAEQTPL AL++AHLAKLAG+PDGVLNVV G+G TAG++IA+HMD+DK+SF
Sbjct: 190 AAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGSTAGSSIANHMDVDKLSF 249

Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
           TGST VGR VMQAA+ SNLK VSLELGGKSPLLIF+D D+  AAD+ALL I +NKGEICV
Sbjct: 250 TGSTKVGRLVMQAASASNLKQVSLELGGKSPLLIFNDADLEKAADLALLAIFYNKGEICV 309

Query: 305 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           A SRV VQEGIYDEF KK+ EKAK+W VGDPFDP V+ GPQV
Sbjct: 310 AGSRVLVQEGIYDEFVKKITEKAKSWAVGDPFDPNVKYGPQV 351

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus]

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/328 (77%), Positives = 290/328 (88%)

Query: 19  IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
           +KFTKLFING+FVDSVSG+TF TIDPRTG+ IA I+EG KED+D+AVKAARQAFD GPWP
Sbjct: 14  VKFTKLFINGDFVDSVSGRTFVTIDPRTGDVIASISEGTKEDIDIAVKAARQAFDSGPWP 73

Query: 79  RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
           R  GAER  IM+K ADLI+E+ E LA L+A+DAGKL+   K  DIPGAA TLRY+AGAAD
Sbjct: 74  RLPGAERAKIMMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAAD 133

Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
           KIHGEVLK+SR L  YTL EP+GVVGHIIPWNFP + FF KVSPALAAGCTM++KPAEQT
Sbjct: 134 KIHGEVLKVSRELHAYTLMEPVGVVGHIIPWNFPASFFFTKVSPALAAGCTMVLKPAEQT 193

Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
           PL AL+ AHLAKLAG+PDGVLNVVPGFG TAGAA++SHMDID VSFTGST  GR+VM+AA
Sbjct: 194 PLSALFCAHLAKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGSTQTGREVMKAA 253

Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
           A+SNLK VSLELGGKSPL+IF+D D++ AA++AL GIL NKGE+CVASSRV+VQEGIYDE
Sbjct: 254 ASSNLKRVSLELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDE 313

Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           FEKKLVEKAKAWVVGDPFDP V+QGPQV
Sbjct: 314 FEKKLVEKAKAWVVGDPFDPKVQQGPQV 341

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:505006369	501	ALDH2C4 "AT3G24503" [Arabidops	0.979	0.682	0.698	2.3e-126
TAIR|locus:2097845	538	ALDH2B4 "AT3G48000" [Arabidops	0.942	0.611	0.537	1.5e-92
UNIPROTKB|P27463	509	ALDH1A1 "Retinal dehydrogenase	0.942	0.646	0.527	1.5e-90
UNIPROTKB|P00352	501	ALDH1A1 "Retinal dehydrogenase	0.942	0.656	0.521	1.1e-89
UNIPROTKB|P48644	501	ALDH1A1 "Retinal dehydrogenase	0.942	0.656	0.524	2.2e-89
UNIPROTKB|J9P9J4	484	ALDH1A1 "Uncharacterized prote	0.936	0.675	0.527	2.8e-89
MGI|MGI:1353450	501	Aldh1a1 "aldehyde dehydrogenas	0.942	0.656	0.518	2.8e-89
RGD|2087	501	Aldh1a1 "aldehyde dehydrogenas	0.942	0.656	0.515	1.2e-88
UNIPROTKB|J9NS92	501	ALDH1A1 "Uncharacterized prote	0.942	0.656	0.522	5.3e-88
UNIPROTKB|E2RMX7	496	ALDH1A1 "Uncharacterized prote	0.931	0.655	0.521	1.4e-87

TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)]

 Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
 Identities = 241/345 (69%), Positives = 274/345 (79%)

Query:     5 LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
             + NG C   +  K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVD
Sbjct:     1 MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVD 60

Query:    63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGD 122
             LAV AAR AFDHGPWPR +G ER  ++ KFAD                 GKL    K  D
Sbjct:    61 LAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYAD 120

Query:   123 IPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181
             IP  A   RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF  KV+
Sbjct:   121 IPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVA 180

Query:   182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241
             PA+AAGCTM+VKPAEQT L AL++AHL+K AG+PDGVLN+V GFG TAGAAIASHMD+DK
Sbjct:   181 PAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIPDGVLNIVTGFGSTAGAAIASHMDVDK 240

Query:   242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGE 301
             VSFTGSTDVGR++MQAAA SNLK VSLELGGKSPLLIF+D D++ AAD+ALLG  +NKGE
Sbjct:   241 VSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGE 300

Query:   302 ICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             ICVASSRV+VQEGIYD+  +KLVEKAK W VGDPFD   RQGPQV
Sbjct:   301 ICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQV 345

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0009699 "phenylpropanoid biosynthetic process" evidence=IDA

GO:0050269 "coniferyl-aldehyde dehydrogenase activity" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 177/329 (53%), Positives = 222/329 (67%)

Query:    18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
             ++  T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPW
Sbjct:    54 QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPW 113

Query:    78 PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
             P+ S  ER  ++L+FAD                 GK +  +   +IP  A   RYYAG A
Sbjct:   114 PKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWA 173

Query:   138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
             DKIHG  +      Q +TL EPIGV G IIPWNFP  MF  KV PALA G T+++K AEQ
Sbjct:   174 DKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233

Query:   198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
             TPL A Y   L   AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++  
Sbjct:   234 TPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGL 293

Query:   258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
             AA SNLKPV+LELGGKSP ++F+D D++ A ++A   + FN+G+ C A SR +V E +YD
Sbjct:   294 AANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYD 353

Query:   318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             EF +K   +A   VVGDPF   + QGPQ+
Sbjct:   354 EFVEKSKARALKRVVGDPFRKGIEQGPQI 382

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005524 "ATP binding" evidence=IDA

UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)]

 Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
 Identities = 174/330 (52%), Positives = 227/330 (68%)

Query:    18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
             +IK+TK+FIN E+ DSVSGK FE  +P   E I  +AEGDK D+D AVKAAR+AF+ G P
Sbjct:    25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSP 84

Query:    77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
             W     +ER  ++ K AD                 GKL S A + D+     T+RY AG 
Sbjct:    85 WRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGW 144

Query:   137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             ADKIHG  + M      +T  EP+GV G IIPWNFP  MF  K++PAL  G T++VKPAE
Sbjct:   145 ADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAE 204

Query:   197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
             QTPL ALY   L K AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +
Sbjct:   205 QTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKE 264

Query:   257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
             AA  +NLK V+LELGGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IY
Sbjct:   265 AAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIY 324

Query:   317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             DEF ++ +E+AK + +GDP  P V+QGPQ+
Sbjct:   325 DEFVRRSIERAKKYTLGDPLLPGVQQGPQI 354

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 172/330 (52%), Positives = 227/330 (68%)

Query:    18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
             +I++TK+FIN E+ DSVSGK F   +P T E + ++ EGDKEDVD AVKAARQAF  G P
Sbjct:    17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSP 76

Query:    77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
             W     +ER  ++ K AD                 GKL+S A + D+ G   TLRY AG 
Sbjct:    77 WRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGW 136

Query:   137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAE
Sbjct:   137 ADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAE 196

Query:   197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
             QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +
Sbjct:   197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKE 256

Query:   257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
             AA  SNLK V+LELGGKSP ++  D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct:   257 AAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIY 316

Query:   317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             DEF ++ VE+AK +++G+P  P V QGPQ+
Sbjct:   317 DEFVRRSVERAKKYILGNPLTPGVTQGPQI 346

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0005099 "Ras GTPase activator activity" evidence=TAS

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005497 "androgen binding" evidence=TAS

GO:0005737 "cytoplasm" evidence=TAS

GO:0006081 "cellular aldehyde metabolic process" evidence=TAS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=EXP

GO:0005829 "cytosol" evidence=TAS

GO:0006069 "ethanol oxidation" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0032320 "positive regulation of Ras GTPase activity" evidence=TAS

UNIPROTKB|P48644 ALDH1A1 "Retinal dehydrogenase 1" [Bos taurus (taxid:9913)]

 Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
 Identities = 173/330 (52%), Positives = 224/330 (67%)

Query:    18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
             + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G P
Sbjct:    17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76

Query:    77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
             W     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG 
Sbjct:    77 WRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136

Query:   137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct:   137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196

Query:   197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
             QTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct:   197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256

Query:   257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
             AA  SNLK VSLELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct:   257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316

Query:   317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             DEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct:   317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

UNIPROTKB|J9P9J4 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 173/328 (52%), Positives = 227/328 (69%)

Query:    20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWP 78
             K+TK+FIN E+ +SVSGK F   +P T E I  + EGDKED+D AVKAARQAF  G PW 
Sbjct:    19 KYTKIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGSPWR 78

Query:    79 RFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAAD 138
               + +ER  ++ K AD                 GKL S +   D+ G   TLRY AG AD
Sbjct:    79 TMNASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWAD 138

Query:   139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
             KIHG  + +     GYT  EPIGV G IIPWNFP  MF  K+ PAL  G T++VKPAEQT
Sbjct:   139 KIHGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQT 198

Query:   199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
             PL AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA
Sbjct:   199 PLTALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAA 258

Query:   259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
               SNLK V+LELGGKSP ++F D D+++A ++A   + +++G+ C+A+SR++V+E IYDE
Sbjct:   259 GKSNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDE 318

Query:   319 FEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             F ++ VE+AK +V+G+P  P V QGPQ+
Sbjct:   319 FVRRSVERAKKYVLGNPLTPGVSQGPQI 346

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)]

 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 171/330 (51%), Positives = 227/330 (68%)

Query:    18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
             +I+ TK+FIN E+ +SVSGK F  ++P T E I  + EGDK DVD AVKAARQAF  G P
Sbjct:    17 KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76

Query:    77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
             W     +ER  ++ K AD                 GK+ + A + D+ G    L+Y AG 
Sbjct:    77 WRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGW 136

Query:   137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             ADKIHG+ +     +  YT REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct:   137 ADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAE 196

Query:   197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
             QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct:   197 QTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256

Query:   257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
             AA  SNLK V+LELGGKSP ++F D D++ A + A  G+ +++G+ CVA+SR++V+E +Y
Sbjct:   257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316

Query:   317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             DEF K+ VE+AK +V+G+P  P + QGPQ+
Sbjct:   317 DEFVKRSVERAKKYVLGNPLTPGINQGPQI 346

GO:0001758 "retinal dehydrogenase activity" evidence=ISO

GO:0002072 "optic cup morphogenesis involved in camera-type eye development" evidence=IGI

GO:0002138 "retinoic acid biosynthetic process" evidence=ISO

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006979 "response to oxidative stress" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0018479 "benzaldehyde dehydrogenase (NAD+) activity" evidence=ISO

GO:0042493 "response to drug" evidence=IDA

GO:0042572 "retinol metabolic process" evidence=IMP

GO:0042573 "retinoic acid metabolic process" evidence=IGI;IMP;IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042904 "9-cis-retinoic acid biosynthetic process" evidence=IDA

GO:0042905 "9-cis-retinoic acid metabolic process" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=IGI

GO:0045471 "response to ethanol" evidence=ISO

GO:0048048 "embryonic eye morphogenesis" evidence=IGI

GO:0051289 "protein homotetramerization" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 170/330 (51%), Positives = 227/330 (68%)

Query:    18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
             +I+ TK+FIN E+ DSVSGK F  ++P T E I  + EGDK DVD AVKAARQAF  G P
Sbjct:    17 KIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSP 76

Query:    77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
             W     +ER  ++ K AD                 GK+ + A + D+ G+   L+Y AG 
Sbjct:    77 WRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGW 136

Query:   137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             ADKIHG+ +     +  +T REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct:   137 ADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAE 196

Query:   197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
             QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +
Sbjct:   197 QTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKE 256

Query:   257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
             AA  SNLK V+LELGGKSP ++F D D++ A + A  G+ +++G+ CVA+SR++V+E +Y
Sbjct:   257 AAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVY 316

Query:   317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             DEF +K VE+AK +V+G+P    + QGPQ+
Sbjct:   317 DEFVRKSVERAKKYVLGNPLTQGINQGPQI 346

GO:0001758 "retinal dehydrogenase activity" evidence=IMP;IDA

GO:0001822 "kidney development" evidence=IEP

GO:0001889 "liver development" evidence=IEP

GO:0002072 "optic cup morphogenesis involved in camera-type eye development" evidence=IEA;ISO

GO:0002138 "retinoic acid biosynthetic process" evidence=IMP

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISO;TAS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0007494 "midgut development" evidence=IEP

GO:0014070 "response to organic cyclic compound" evidence=IEP

GO:0018479 "benzaldehyde dehydrogenase (NAD+) activity" evidence=IDA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032526 "response to retinoic acid" evidence=IEP

GO:0042493 "response to drug" evidence=IEP;ISO

GO:0042572 "retinol metabolic process" evidence=IEA;ISO

GO:0042573 "retinoic acid metabolic process" evidence=ISO

GO:0042802 "identical protein binding" evidence=IDA

GO:0042904 "9-cis-retinoic acid biosynthetic process" evidence=IEA;ISO

GO:0042905 "9-cis-retinoic acid metabolic process" evidence=IDA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA;ISO

GO:0045471 "response to ethanol" evidence=IDA

GO:0048048 "embryonic eye morphogenesis" evidence=ISO

GO:0051289 "protein homotetramerization" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0060206 "estrous cycle phase" evidence=IEP

UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 173/331 (52%), Positives = 228/331 (68%)

Query:    18 EIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
             +IK F+ +FIN E+ +SVSGK F   +P T E I  + EGDKED+D AVKAARQAF  G 
Sbjct:    16 KIKLFSLIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGS 75

Query:    76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
             PW   + +ER  ++ K AD                 GKL S +   D+ G   TLRY AG
Sbjct:    76 PWRTMNASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAG 135

Query:   136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
              ADKIHG  + +     GYT  EPIGV G IIPWNFP  MF  K+ PAL  G T++VKPA
Sbjct:   136 WADKIHGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPA 195

Query:   196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
             EQTPL AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + 
Sbjct:   196 EQTPLTALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIK 255

Query:   256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
             +AA  SNLK V+LELGGKSP ++F D D+++A ++A   + +++G+ C+A+SR++V+E I
Sbjct:   256 EAAGKSNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESI 315

Query:   316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             YDEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct:   316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 170/326 (52%), Positives = 225/326 (69%)

Query:    22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRF 80
             +++FIN E+ +SVSGK F   +P T E I  + EGDKED+D AVKAARQAF  G PW   
Sbjct:    16 SQIFINNEWHNSVSGKKFPVFNPATEEKICEVEEGDKEDIDKAVKAARQAFQIGSPWRTM 75

Query:    81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
             + +ER  ++ K AD                 GKL S +   D+ G   TLRY AG ADKI
Sbjct:    76 NASERGRLIYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKI 135

Query:   141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
             HG  + +     GYT  EPIGV G IIPWNFP  MF  K+ PAL  G T++VKPAEQTPL
Sbjct:   136 HGRTIPVDGNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPL 195

Query:   201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
              AL+ A L + AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA  
Sbjct:   196 TALHVASLIQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGK 255

Query:   261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
             SNLK V+LELGGKSP ++F D D+++A ++A   + +++G+ C+A+SR++V+E IYDEF 
Sbjct:   256 SNLKRVTLELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFV 315

Query:   321 KKLVEKAKAWVVGDPFDPAVRQGPQV 346
             ++ VE+AK +V+G+P  P V QGPQ+
Sbjct:   316 RRSVERAKKYVLGNPLTPGVSQGPQI 341

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51647	AL1A1_RAT	1, ., 2, ., 1, ., 3, 6	0.5333	0.9426	0.6566	yes	no
P41751	ALDH_ASPNG	1, ., 2, ., 1, ., 3	0.5448	0.9197	0.6458	yes	no
P00352	AL1A1_HUMAN	1, ., 2, ., 1, ., 3, 6	0.5393	0.9426	0.6566	yes	no
P15437	AL1A1_HORSE	1, ., 2, ., 1, ., 3, 6	0.5303	0.9426	0.658	yes	no
Q56YU0	AL2C4_ARATH	1, ., 2, ., 1, ., 3	0.7275	0.9799	0.6826	yes	no
P48644	AL1A1_BOVIN	1, ., 2, ., 1, ., 3, 6	0.5454	0.9426	0.6566	yes	no
P54114	ALDH3_YEAST	1, ., 2, ., 1, ., 5	0.5029	0.9426	0.6501	yes	no
P08157	ALDH_EMENI	1, ., 2, ., 1, ., 3	0.5295	0.9541	0.6700	yes	no
O14293	YF19_SCHPO	1, ., 2, ., 1, ., -	0.5185	0.9226	0.6401	yes	no
P24549	AL1A1_MOUSE	1, ., 2, ., 1, ., 3, 6	0.5393	0.9426	0.6566	yes	no
Q2XQV4	ALDH2_PIG	1, ., 2, ., 1, ., 3	0.5225	0.9512	0.6372	yes	no
Q8MI17	AL1A1_RABIT	1, ., 2, ., 1, ., 3, 6	0.5545	0.9426	0.6633	yes	no
P27463	AL1A1_CHICK	1, ., 2, ., 1, ., 3, 6	0.5484	0.9426	0.6463	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	ALDH1a	aldehyde dehydrogenase, putative, expressed (502 aa)
		(Oryza sativa Japonica)
Predicted Functional Partners:
	4330021	GLTP domain containing protein, putative, expressed (202 aa)							•		0.744
	4339066	thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein (605 aa)						•	•		0.577
	4329518	AMP-binding enzyme, putative, expressed (705 aa)				•		•	•		0.444
	4336402	L-allo-threonine aldolase, putative, expressed (372 aa)						•	•		0.437
	4328812	citrate synthase, putative, expressed (500 aa)						•	•		0.431
	OsI_15767	AMP-binding enzyme, putative, expressed (747 aa)						•	•		0.420

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	0.0
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	0.0
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	0.0
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	1e-173
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	1e-155
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-150
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	1e-148
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-145
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-143
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	1e-133
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-131
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	1e-131
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-129
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-127
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	1e-125
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-124
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	1e-120
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-118
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	1e-117
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-116
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-114
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-114
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-114
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	1e-113
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-111
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	1e-109
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-109
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-108
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-107
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-107
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-106
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-105
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-105
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	1e-104
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-99
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	3e-96
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	3e-95
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	1e-94
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	5e-94
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	2e-93
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	1e-92
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	5e-92
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	4e-90
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	5e-90
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	1e-89
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	2e-88
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	3e-88
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	6e-88
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	1e-87
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	6e-87
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	4e-77
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-76
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	2e-76
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	1e-74
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	1e-74
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	2e-74
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	4e-74
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	3e-73
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	2e-72
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	1e-71
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	4e-71
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	6e-69
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	2e-68
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	4e-68
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	2e-67
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	3e-67
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	6e-66
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	3e-62
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	3e-61
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	9e-58
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	2e-55
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	2e-54
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	5e-52
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	5e-52
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	6e-52
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	2e-49
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	2e-49
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	5e-48
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	3e-47
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	1e-46
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	8e-46
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	6e-44
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	3e-43
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	8e-43
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	1e-42
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	5e-42
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	3e-40
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	8e-40
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	1e-39
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	2e-39
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	7e-37
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	8e-36
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	2e-34
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	5e-34
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	2e-31
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-30
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	1e-29
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	3e-28
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	1e-26
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	1e-25
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	8e-25
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	2e-22
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	3e-22
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	1e-21
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	2e-21
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	6e-17
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	2e-16
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	6e-16
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	1e-15
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	5e-12
cd07077	397	cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh	2e-09
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	5e-07
cd07121	429	cd07121, ALDH_EutE, Ethanolamine utilization prote	2e-06
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	5e-06
cd07122	436	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh	5e-05
PRK15398	465	PRK15398, PRK15398, aldehyde dehydrogenase EutE; P	4e-04
TIGR02518	488	TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (	0.001

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  663 bits (1712), Expect = 0.0
 Identities = 283/344 (82%), Positives = 304/344 (88%)

Query: 3   GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVD 62
           GS  N    S  K+PEIKFTKLFINGEFVD+ SGKTFET DPRTGE IARIAEGDKEDVD
Sbjct: 2   GSNGNCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVD 61

Query: 63  LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD 122
           LAVKAAR+AFDHGPWPR SG ER  IM+KFADLIEEH E LA L+ +DAGKL +  K  D
Sbjct: 62  LAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVD 121

Query: 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182
           IP AA  LRYYAGAADKIHGE LKMSR LQGYTL+EPIGVVGHIIPWNFP+TMFFMKV+P
Sbjct: 122 IPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAP 181

Query: 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242
           ALAAGCTM+VKPAEQTPL AL++AHLAKLAGVPDGV+NVV GFGPTAGAAIASHMD+DKV
Sbjct: 182 ALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKV 241

Query: 243 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEI 302
           SFTGST+VGR++MQAAATSNLK VSLELGGKSPLLIFDD DV+ A D+ALLGI +NKGEI
Sbjct: 242 SFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEI 301

Query: 303 CVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           CVASSRVYVQEGIYDEF KKLVEKAK WVVGDPFDP  RQGPQV
Sbjct: 302 CVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQV 345

Length = 501

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  533 bits (1375), Expect = 0.0
 Identities = 207/328 (63%), Positives = 245/328 (74%)

Query: 19  IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
           +K TKLFING+FVD+ SGKTF TIDPR GE IA +AEGD EDVD AVKAAR+AFD GPWP
Sbjct: 1   VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60

Query: 79  RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
           R +G ER  I+L+FADL+E+HA+ LA LE  D GK +  A+  ++P AA   RYYAG AD
Sbjct: 61  RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120

Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
           KIHG  L        YTL EPIGVVG IIPWNFP  MF  KV PALA G T+++KPAEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180

Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
           PL AL  A LA  AG+PDGVLN+V GFGPTAGAAIASHMD+DKV+FTGST+VG+ +MQ A
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240

Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
           A SNLKPV+LELGGKSP ++ +D DV+ A ++A   + FN+G+ C A SR +V E IYDE
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300

Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           F +K   +A   VVGDPF   V QGPQV
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQV 328

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  513 bits (1324), Expect = 0.0
 Identities = 194/325 (59%), Positives = 236/325 (72%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           T LFIN EFVDSVSGKTF TI+P T E I ++AE D+EDVD AVKAAR AF+ G W +  
Sbjct: 4   TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             ER  ++ K ADLIE   + LA LE+LD GK    +  GD+  +   LRYYAG ADKI 
Sbjct: 64  PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           G+ + +      YT REPIGV G IIPWNFP  M   K++PALAAG T+++KPAEQTPL 
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           ALY A L K AG P GV+N+VPGFGPTAGAAI+SHMD+DK++FTGST VGR +M+AAA S
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
           NLK V+LELGGKSP ++FDD D++ A + A  GI FN+G+ C A SR++VQE IYDEF +
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303

Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQV 346
           K   +A+  VVGDPFDP   QGPQV
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQV 328

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  490 bits (1264), Expect = e-173
 Identities = 197/331 (59%), Positives = 236/331 (71%), Gaps = 1/331 (0%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
           PEIK+TK+FIN E+ DSVSGKTF TI+P TGE I  + EGDK DVD AVKAAR AF  G 
Sbjct: 2   PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
           PW     +ER  ++ K ADLIE     LA LE LD GK  S + + D+PGA   LRYYAG
Sbjct: 62  PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121

Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
            ADKIHG+ + M      YT  EP+GV G IIPWNFP  M   K++PALA G T+++KPA
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           EQTPL ALY A L K AG P GV+NVVPG+GPTAGAAI+SH DIDKV+FTGST+VG+ + 
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           QAA  SNLK V+LELGGKSP ++F D D++ A + A   + FN G+ C A SR +VQE I
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           YDEF K+ VE+AK  VVG+PFDP   QGPQ+
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQI 332

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  446 bits (1148), Expect = e-155
 Identities = 192/333 (57%), Positives = 238/333 (71%), Gaps = 8/333 (2%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
           ++ +T+L ING+FVD+ SGKTF T+DPRTGE IA +AEGD EDV+ AV AAR+AFD GPW
Sbjct: 54  QVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPW 113

Query: 78  PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
           P+ +  ER  I+L+FADL+E+H + LA LE  D GK +  +   ++P  A   RYYAG A
Sbjct: 114 PKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWA 173

Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
           DKIHG  +         TL EPIGV G IIPWNFP  MF  KV PALA G T+++K AEQ
Sbjct: 174 DKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 233

Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
           TPL ALY A L   AG+P GVLNVV GFGPTAGAA+ASHMD+DK++FTGSTD G+ V++ 
Sbjct: 234 TPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293

Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           AA SNLKPV+LELGGKSP ++ +D DV+ A ++A   + FN+G+ C A SR +V E +YD
Sbjct: 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYD 353

Query: 318 EFEKKLVEKAKA----WVVGDPFDPAVRQGPQV 346
           EF    VEKAKA     VVGDPF   V QGPQ+
Sbjct: 354 EF----VEKAKARALKRVVGDPFKKGVEQGPQI 382

Length = 538

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  430 bits (1107), Expect = e-150
 Identities = 167/312 (53%), Positives = 215/312 (68%), Gaps = 1/312 (0%)

Query: 36  GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95
           G+TF TI+P TG  +A +A  D  DVD AV AAR+AF+ G W R S AER+ ++L+ ADL
Sbjct: 1   GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60

Query: 96  IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 155
           IE H + LA+LE LD GK  S A   D+P AANT R+YA A DK++GEV           
Sbjct: 61  IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALI 120

Query: 156 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 215
            REP+GVVG ++PWNFP  M   K++PALAAG ++++KPAEQ+PL AL  A LA  AG+P
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLP 180

Query: 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275
            GVLNVVPGFG TAG A+  HMD+D ++FTGST+VGR+ ++ +  SNLK V LE GGKSP
Sbjct: 181 AGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240

Query: 276 LLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
            ++F D  D++ AA+ A  GI +N+GE+C A SR+ V E I DEF +K+V  A+ W  GD
Sbjct: 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGD 300

Query: 335 PFDPAVRQGPQV 346
           P DPA R G  V
Sbjct: 301 PLDPATRMGALV 312

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  426 bits (1097), Expect = e-148
 Identities = 166/317 (52%), Positives = 214/317 (67%), Gaps = 5/317 (1%)

Query: 30  FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
           +VDS S +T E I+P TGE IA +     EDVD AV AAR AF    W +   +ER  I+
Sbjct: 1   WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFK--AWAKTPPSERAAIL 57

Query: 90  LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
           LK ADL+EE  + LA LE L+ GK  + A+ G++P A +TLRYYAG A K+ GE L    
Sbjct: 58  LKAADLLEERRDELAELETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPSDP 116

Query: 150 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209
            +  YT REP+GVVG I PWNFP  +   K++PALAAG T+++KP+E TPL AL  A L 
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176

Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 269
           + AG+P GVLNVV G G   G A+  H D+DKVSFTGST+VGR++ +AAA  NLK V+LE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA-KNLKRVTLE 235

Query: 270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
           LGGK+PL++FDD D++ A + A+ G   N G++C A SR+ V E IYDEF ++LVE AK+
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295

Query: 330 WVVGDPFDPAVRQGPQV 346
             VGDP DP    GP +
Sbjct: 296 LKVGDPLDPDTDIGPLI 312

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  419 bits (1078), Expect = e-145
 Identities = 171/326 (52%), Positives = 226/326 (69%), Gaps = 3/326 (0%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           T LFIN EFV S  G+T +T++P TGE IA +    +EDVD AVKAAR+AF+   W + +
Sbjct: 8   TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE-SWWSKVT 66

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
           G ER  ++ K ADL+E++ ++LA +EALD+GK +    +GD+      +RYYAG ADKI 
Sbjct: 67  GEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQ 126

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           G+ +  S     YTL EP GV G IIPWN+P  M   K++PALAAG T+++KPAE TPL 
Sbjct: 127 GKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLS 186

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
            LYFA+L K AG P GV+N++PG+G  AG+A+A H D+DK++FTGST  GR VM+AAA  
Sbjct: 187 LLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-Q 245

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
           NLK V+LE GGKSP L+F+D D++ A   A  GI++N G+ C A+SR+YVQE IYD+F +
Sbjct: 246 NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVE 305

Query: 322 KLVEKAK-AWVVGDPFDPAVRQGPQV 346
           K VE  K  + VG PFD     GPQV
Sbjct: 306 KFVEHVKQNYKVGSPFDDDTVVGPQV 331

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  414 bits (1066), Expect = e-143
 Identities = 182/326 (55%), Positives = 225/326 (69%), Gaps = 2/326 (0%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR-F 80
           T LFINGEFVDSV G T +  +P TG+ I +IAE  + DVD+AV+ A  AF+   W    
Sbjct: 7   TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFE-TDWGLKV 65

Query: 81  SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
           SG++R   + K ADL+E + + LA +EALD GK    AK  D+  +A+T RYY G ADKI
Sbjct: 66  SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125

Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           HG+V++       YT  EPIGV G IIPWNFP  M   K++PALAAG T+++KP+E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            ALY   L   AG P GV+NVV G+G T G AI+SHMDIDKV+FTGST VGR+VM+AAA 
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245

Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
           SNLK V+LELGGKSP ++FDD D+ +A      GI FN G++C A SR+YVQEGIYD+F 
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305

Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQV 346
           K+  EKAK   VGDPF     QGPQV
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQV 331

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  388 bits (998), Expect = e-133
 Identities = 152/306 (49%), Positives = 199/306 (65%), Gaps = 3/306 (0%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
             +P TGE +A++ EG   +VD AV AA++AF    W R S AER  I+ K ADLIE  A
Sbjct: 1   NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
           + LA+LE+LD GK  + A+  DIP AA   R++A    ++ GE          Y LR+P+
Sbjct: 59  DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           GV G I PWN P  +   K++PALA G T+++KP+E TPL A   A LA  AG+P GV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178

Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
           VV GFGP AGAA+ +H D+D +SFTG T  GR +M+AAA  NLKPVSLELGGK+P ++F 
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFA 237

Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
           D D++ A D A+     N GE+C+A SR+ VQ  IYDEF ++ VE+AKA  VGDP DP  
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297

Query: 341 RQGPQV 346
             GP +
Sbjct: 298 EVGPLI 303

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  383 bits (986), Expect = e-131
 Identities = 163/325 (50%), Positives = 213/325 (65%), Gaps = 6/325 (1%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
            KL I+GE+VD  S  T E I+P TGE IA +     EDVD AV AAR AF+   W R S
Sbjct: 1   YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             ER  I+ + ADL+E  AE LA L  L+ GK  S A+ G+I  AA+ +RYYA  A ++ 
Sbjct: 57  AEERAAILRRIADLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLE 115

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           GE +   +  +    REP+GVVG I PWNFP  +   K++PALAAG T+++KP+EQTPL 
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           AL  A LA  AG+P GVLNVV G G   G A+ +H D+D +SFTGST VGR +  AAA +
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-A 234

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
           NLKPV+LELGGKSP ++ +D D++ A D A+ G  FN G+ C A+SR+ V E +YDEF +
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294

Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQV 346
           +LV +A +  VGDP DP+   GP +
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLI 319

Length = 472

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  382 bits (983), Expect = e-131
 Identities = 151/322 (46%), Positives = 202/322 (62%), Gaps = 2/322 (0%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           +I+GE+V++ SGKT + I+P  GE IA + EG  ED   A+ AAR+AFD G WP     E
Sbjct: 1   YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  ++ + AD I E AE LA LE L+ GK    ++  DI   AN  RYYAG A K  GEV
Sbjct: 61  RAALLFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEV 119

Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
             +   +   T+REP+GV G I PWN+P      K++PALAAG T+++KP+E TPL  + 
Sbjct: 120 YDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIA 179

Query: 205 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
              L + AG+P GV+N+V G G T GA +A   D+D VSFTG T  GR +M+AAA  N+K
Sbjct: 180 LFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVK 238

Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
            V+LELGGK+P ++F D D  TA D AL G+ FN G++C A SR+ V+E I+D+F   L 
Sbjct: 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALA 298

Query: 325 EKAKAWVVGDPFDPAVRQGPQV 346
           E+AK   +G+  D     GP V
Sbjct: 299 ERAKKIKLGNGLDADTEMGPLV 320

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  376 bits (968), Expect = e-129
 Identities = 147/306 (48%), Positives = 194/306 (63%), Gaps = 5/306 (1%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
           +I+P TGE  AR+ E    DVD AV AAR AF+ G W + +  ER  ++ + ADLIE +A
Sbjct: 1   SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60

Query: 101 EVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLRE 158
           E LA LE  D GKL    +    +   A   RYYAG ADKI G V+ + +     +T RE
Sbjct: 61  EELAELETRDNGKL--IRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118

Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218
           P+GVV  I PWN P  +   K++PALAAG T+++KP+E TP   L  A LA+ AG P GV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178

Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
           +NVV GFGP  G A+  H  + K++FTG T+ GR + +AAA  NL PV+LELGGKSP ++
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIV 237

Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
           FDD D++ A +  + GI    G+ CVA SR+ VQ  IYDEF ++LV +A+A  VGDP DP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297

Query: 339 AVRQGP 344
             + GP
Sbjct: 298 ETQMGP 303

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  371 bits (953), Expect = e-127
 Identities = 163/306 (53%), Positives = 206/306 (67%), Gaps = 3/306 (0%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
           T++P TGE IAR+A+   EDVD AV AAR AF+   W     AER  I+ + A+LI  +A
Sbjct: 1   TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
           + LA LE+LD GK    A+  D+P AA+T RYYAG ADKI GEV+ +      YT+REP+
Sbjct: 59  DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           GVVG I+PWNFP      KV+PALAAG T+++KPAE TPL AL  A L   AG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178

Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
           VV GFG  AGAA+  H D+DK++FTGST VGR++MQ AA  NLK VSLELGGKS  ++F 
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFA 237

Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
           D D++ A   A  GI +N+G++C A SR+ V E IYDEF ++    A++   GDP DP  
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297

Query: 341 RQGPQV 346
           + GP V
Sbjct: 298 QMGPLV 303

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  368 bits (947), Expect = e-125
 Identities = 155/335 (46%), Positives = 223/335 (66%), Gaps = 8/335 (2%)

Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           KMP     +LFINGEFVD+  GKT+ TI+P  G  I +++    EDVD AV AA++AF++
Sbjct: 3   KMP----HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFEN 58

Query: 75  GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
           G W + +  +R  +M + ADL+EEH E LA +E+LD+G +++ A    +  +  T RY+A
Sbjct: 59  GEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFA 118

Query: 135 GAADKIHGEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
           G  DKI G+ + +++A        T REPIGV G +IPWN+P  M   K++  LAAG T+
Sbjct: 119 GWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTV 178

Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
           ++KPA+ TPL AL FA L   AG P GV+N++PG G   G  ++ H D+ K+ FTGST +
Sbjct: 179 VLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPI 238

Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
           G+ +M++ A SNLK VSLELGGKSPL+IF D D++ A  M +  + FNKGE C+A+ R++
Sbjct: 239 GKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLF 298

Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
           V+E I+DEF +++VE+ K   +GDP D +   GPQ
Sbjct: 299 VEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQ 333

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  364 bits (936), Expect = e-124
 Identities = 149/286 (52%), Positives = 188/286 (65%), Gaps = 5/286 (1%)

Query: 62  DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG 121
           D AV AAR AF    W     AER  I+ K ADL+EE  E LA LE L+ GK    A  G
Sbjct: 1   DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-G 57

Query: 122 DIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180
           ++  AA+T RYYAG A ++HGEV+            REP+GVVG I PWNFP  +   K+
Sbjct: 58  EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117

Query: 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240
           +PALAAG T+++KP+E TPL AL  A L   AG+P GVLNVV G G   GAA+ASH  +D
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177

Query: 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300
           K+SFTGST VG+ +M+AAA  NLK V+LELGGKSPL++FDD D++ A   A+ G   N G
Sbjct: 178 KISFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236

Query: 301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           ++C A+SR+ V E IYDEF ++LVE+ KA  VG+P DP    GP +
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLI 282

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  353 bits (907), Expect = e-120
 Identities = 149/292 (51%), Positives = 191/292 (65%), Gaps = 3/292 (1%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
            DP TGE  ARIA G   DVD AV+AAR+AF+   W R S AER  ++L+ A LI EHA+
Sbjct: 2   FDPSTGEVFARIARGGAADVDRAVQAARRAFE-SGWLRLSPAERGRLLLRIARLIREHAD 60

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIG 161
            LA LE+LD GK  + A+  D+  AA    YY GAADK+HGE + +      YT+REP G
Sbjct: 61  ELARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119

Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
           V GHIIPWN+P  +    V+PALAAG  ++VKPAE  PL AL  A LA+ AG+P G LNV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179

Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
           V G G  AGAA+ +H  +D +SFTGS + G  VM+AAA  N+ PV+LELGGKSP ++F D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVFAD 238

Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
            D+  A  + +  I+ N G+ C A SR+ V   IYDE  ++LVE+ +A  VG
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG 290

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  350 bits (901), Expect = e-118
 Identities = 159/331 (48%), Positives = 199/331 (60%), Gaps = 13/331 (3%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
             FINGE+V    G+ F+  +P  G+ +  I     EDVDLAV AA +AF    W + S 
Sbjct: 2   DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSV 59

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
           AER  I+ K AD IEE+ E+LAV E LD GK        DIP A +  RY+AG      G
Sbjct: 60  AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119

Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
            + ++      Y   EP+GVVG IIPWNFP  M   K++PALAAG T+++KPA QTPL  
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179

Query: 203 LYFAHLAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
           L    L +L G  +P GV+NVV GFG  AG  +ASH  I K++FTGST VGR +MQ AA 
Sbjct: 180 LV---LMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA- 235

Query: 261 SNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
            NL PV+LELGGKSP + FDD      D +  A+   LG  FN+GE+C   SR  VQE I
Sbjct: 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESI 295

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           YDEF ++ VE+ +A  VG+P DP    G QV
Sbjct: 296 YDEFIERAVERFEAIKVGNPLDPETMMGAQV 326

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  346 bits (890), Expect = e-117
 Identities = 155/323 (47%), Positives = 213/323 (65%), Gaps = 1/323 (0%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
            +LFINGE+  +   +TFET+DP T   +A+IA G   D+D AV AAR  F+ G W   S
Sbjct: 20  NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
            A+R+ ++ K ADL+E HAE LA+LE LD GK    +   DIPGAA  +R+YA A DK++
Sbjct: 80  PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           GEV   S       +REP+GV+  I+PWNFP  +   K+ PALAAG ++I+KP+E++PL 
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           A+  A LAK AG+PDGVLNVV GFG  AG A++ H DID ++FTGST  G+Q+++ A  S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259

Query: 262 NLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
           N+K V LE GGKS  ++F D  D+  AA     GI +N+G++C+A +R+ ++E I DEF 
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319

Query: 321 KKLVEKAKAWVVGDPFDPAVRQG 343
             L ++A+ W  G P DPA   G
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMG 342

Length = 494

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  344 bits (886), Expect = e-116
 Identities = 140/332 (42%), Positives = 186/332 (56%), Gaps = 16/332 (4%)

Query: 21  FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
            TKL INGE V    G+     +P TGE +A IAE     VD AV AA  AF    W + 
Sbjct: 2   QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQT 58

Query: 81  SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
           +  ER   +LK AD IEE+A+  A LE+L+ GK    A   +IP   +  R++AGAA  +
Sbjct: 59  TPKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCL 118

Query: 141 HGEVLKMSRA---LQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
            G       A   L+G+T    R+P+GVV  I PWN+P  M   K++PALAAG T+++KP
Sbjct: 119 EG-----KAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKP 173

Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
           +E TPL AL  A LA    +P GVLNVV G G T G A+  H  +  VS TGS   G+ V
Sbjct: 174 SEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHV 232

Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
           + AAA  ++K   LELGGK+P+++FDD D++   +       +N G+ C A+ R+Y Q G
Sbjct: 233 LSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291

Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           IYD+   KL        VGDP D     GP +
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLI 323

Length = 475

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  339 bits (872), Expect = e-114
 Identities = 134/304 (44%), Positives = 187/304 (61%), Gaps = 5/304 (1%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
           I+P TGE I  + +    D D A+ AA  AF    W + +  ER  I+ ++ADLI E AE
Sbjct: 2   INPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAE 59

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPI 160
            LA L  L+ GK  + A+ G++  AA+ L ++A  A +I+G  +       +   +++P+
Sbjct: 60  DLARLLTLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           GVV  I PWNFP  M   K++PALAAGCT+++KPAE+TPL AL  A LA+ AG+P GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178

Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
           VV G     G A+ +   + K+SFTGST VG+ +M  AA   +K VSLELGG +P ++FD
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237

Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
           D D++ A D A+     N G+ CV ++R+YV E IYDEF +KLVE+ K   VG+  D   
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297

Query: 341 RQGP 344
             GP
Sbjct: 298 DMGP 301

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  340 bits (874), Expect = e-114
 Identities = 145/331 (43%), Positives = 198/331 (59%), Gaps = 4/331 (1%)

Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M       L+I+G +V++ SG+TFE I+P TGE +A +      DV+ AV +A+Q     
Sbjct: 1   MSRQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQ--K 58

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
            W   +  ER  I+ +  D++ E  + LA LE LD GK      + DI   A+ L YYAG
Sbjct: 59  IWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAG 118

Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
            A  + GE + +      YT REP+GV   I  WN+P  +   K +PALAAG  MI KP+
Sbjct: 119 LAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPS 178

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           E TPL AL  A +   AG+PDGV NVV G G   GA +  H DI KVSFTG    G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVM 237

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
            AAA S LK V++ELGGKSPL++FDD D++ AAD+A+L   ++ G++C   +RV+VQ+ I
Sbjct: 238 AAAAAS-LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSI 296

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              FE +L+E+ +   +GDP DPA   GP V
Sbjct: 297 KAAFEARLLERVERIRIGDPMDPATNFGPLV 327

Length = 488

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  337 bits (867), Expect = e-114
 Identities = 148/310 (47%), Positives = 190/310 (61%), Gaps = 8/310 (2%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
            I+P T   I  I     EDVD AV+AAR+AF    W + +GAER   +   A+ + E  
Sbjct: 1   VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH---GEVLKM-SRALQGYTL 156
           E LA LEA D GK    A   D+   A    YYA  A+++       + + S   +    
Sbjct: 59  EELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117

Query: 157 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216
           REP+GVVG I PWNFP  M   KV+PALAAGCT+++KP+E T L  L  A +A  AG+P 
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177

Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
           GVLNVV G G  AGA +A+H  IDK+SFTGST  G QVMQAAA  ++KPVSLELGGKSP+
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPI 236

Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
           ++FDD D+  A + A+ G  +N G+IC A+SR+ V E I D F ++L   A+A  VGDP 
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296

Query: 337 DPAVRQGPQV 346
           +  VR GP V
Sbjct: 297 EEGVRLGPLV 306

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  337 bits (866), Expect = e-113
 Identities = 136/324 (41%), Positives = 183/324 (56%), Gaps = 3/324 (0%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           LFI G +V     +T + + P T E + R+ E    DVD AV AAR+AFD+GPWPR S A
Sbjct: 1   LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  ++ + AD +E  A+ LA L   + G   SW++    PG A  LRYYA  A     E
Sbjct: 61  ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120

Query: 144 VLKMSRAL-QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
             +           REP+GVV  I+PWN P  +  +K++PALAAGCT+++KP+ +TPL A
Sbjct: 121 ERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDA 180

Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
              A  A+ AG+P GV+NVVP      G  +  H  +DKVSFTGST  GR++        
Sbjct: 181 YLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ER 238

Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           L  V+LELGGKS  ++ DD D++ A    +   L N G++CVA +R+ V    YDE  + 
Sbjct: 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEA 298

Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
           L     A  VGDP DPA + GP  
Sbjct: 299 LAAAVAALKVGDPLDPATQIGPLA 322

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  331 bits (851), Expect = e-111
 Identities = 153/301 (50%), Positives = 194/301 (64%), Gaps = 3/301 (0%)

Query: 44  PRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103
           P  G  +AR AEG  EDVD AV AAR+AFD GPWPR SGAER  ++LK ADLI    E L
Sbjct: 4   PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63

Query: 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGV 162
           A++E L++GK  S A  G+I GAA+  RY A  A  +HG+    +   + G  LREPIGV
Sbjct: 64  ALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122

Query: 163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 222
           VG I PWNFP  +   K+  ALAAGCT++VKP+E T    L  A L   AG+P GV+N+V
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182

Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282
            G+G T G A+  H D+D VSFTGST VG+ +  AAA  NLK VSLELGGK+P ++F D 
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADA 241

Query: 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 342
           D++ AAD  + G+ FN GE C + SR+ V E I D F   +V +++   VGDP DP  + 
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301

Query: 343 G 343
           G
Sbjct: 302 G 302

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  327 bits (840), Expect = e-109
 Identities = 153/324 (47%), Positives = 207/324 (63%), Gaps = 4/324 (1%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
            LFINGE+V   SG+T ++ +P  GE ++ I +    DVD AVKAA++AF    W + + 
Sbjct: 2   GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTV 59

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
           AER  I+ K AD+I+E+ E+LA++E LD GK     +  DIP AA+  RY+AG      G
Sbjct: 60  AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119

Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
               +        LREPIGVVG IIPWNFP  M   K++PALAAG T+++KP+  T L  
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179

Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           L  A + +   +P GV+N+V G G  +G  + +H  +DK++FTGST+VGR V  AAA   
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KK 237

Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           L P +LELGGKS  +IFDD + + A + A LGILFN+G++C A SR++VQEGIYDEF  K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297

Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
           L EK +   VG+P DP  + G QV
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQV 321

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  325 bits (836), Expect = e-109
 Identities = 127/324 (39%), Positives = 176/324 (54%), Gaps = 9/324 (2%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
            +I+G +V     +T + I+P T E I  +  G   DVD AV AAR+AF    W   S  
Sbjct: 1   FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  ++ + A+  E  A+ LA    L+ G   + A+   +      LR  A A       
Sbjct: 59  ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF--- 115

Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
             +         + REPIGV G I PWN+P     +KV+PALAAGCT+++KP+E  PL A
Sbjct: 116 --EFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSA 173

Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           +  A +   AG+P GV N+V G GP  G A+++H D+D VSFTGST  G++V +AAA + 
Sbjct: 174 IILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT- 232

Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           +K V+LELGGKS  +I DD D+  A    +     N G+ C A +R+ V    Y E E+ 
Sbjct: 233 VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEI 292

Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
               A+A+VVGDP DPA   GP  
Sbjct: 293 AAAAAEAYVVGDPRDPATTLGPLA 316

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  323 bits (830), Expect = e-108
 Identities = 140/322 (43%), Positives = 198/322 (61%), Gaps = 3/322 (0%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FI+GE+V+  +G T E I+P  GE IA +     EDV+ A+ AAR+A   G W   S  E
Sbjct: 1   FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ--GEWAAMSPME 58

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+ + ADLI E  E LA LE LD GK      + D+   A+   ++AG A  ++GE+
Sbjct: 59  RGRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEI 118

Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
           + +      YT+REP+GV   I  WN+P  +   K++PALAAG  M+ KP+E TPL AL 
Sbjct: 119 IPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALK 178

Query: 205 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
            A + + AG+P GV NVV G G   G  + +H D+ KVSFTG    G+++M AAA  +LK
Sbjct: 179 VAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAA-GHLK 237

Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
            V++ELGGKSPL++FDD D+ +A D A+LG  F+ G++C   +RV+V + I + F  +LV
Sbjct: 238 HVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLV 297

Query: 325 EKAKAWVVGDPFDPAVRQGPQV 346
           E+ +   +GDPFD A   GP +
Sbjct: 298 ERTERIKLGDPFDEATEMGPLI 319

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  322 bits (828), Expect = e-107
 Identities = 143/323 (44%), Positives = 198/323 (61%), Gaps = 5/323 (1%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           +INGEFV S SG+T + ++P TGE +A +     ED D AV AA  A     W R    E
Sbjct: 1   YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIE 58

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R   + K ADLI E+A+ LA L   + GK  S A++ ++   A+ + Y A  A +I GE+
Sbjct: 59  RAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEI 117

Query: 145 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           +   R  +  +  + PIGVV  I+PWNFP  +   K++PAL  G T+++KP+E+TPL AL
Sbjct: 118 IPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNAL 177

Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
            FA L   AG+P GVLN+V G G   G A+ +H  +  +S TGST+ G+++M+AAA  N+
Sbjct: 178 EFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENI 236

Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
             VSLELGGK+P ++  D D++ A    +   + N G++C  + RVYV E IYDEF +KL
Sbjct: 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKL 296

Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
           VEK KA  VGDPFD A   GP V
Sbjct: 297 VEKMKAVKVGDPFDAATDMGPLV 319

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  318 bits (816), Expect = e-107
 Identities = 135/260 (51%), Positives = 173/260 (66%), Gaps = 5/260 (1%)

Query: 66  KAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPG 125
            AAR AF    W     AER  I+ K ADL+EE  E LA LE L+ GK    A  G++  
Sbjct: 1   AAARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVAR 57

Query: 126 AANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
           A +T RY AG ADK+ G  L       + Y  REP+GVVG I PWNFP  +   K++PAL
Sbjct: 58  AIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPAL 117

Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
           AAG T+++KP+E TPL AL  A L + AG+P GV+NVVPG G   GAA+ SH  +DK+SF
Sbjct: 118 AAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISF 177

Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
           TGST VG+ +M+AAA  NLKPV+LELGGKSP+++ +D D++ A + A+ G  FN G+IC 
Sbjct: 178 TGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICT 236

Query: 305 ASSRVYVQEGIYDEFEKKLV 324
           A+SR+ V E IYDEF +KLV
Sbjct: 237 AASRLLVHESIYDEFVEKLV 256

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  319 bits (819), Expect = e-106
 Identities = 150/332 (45%), Positives = 197/332 (59%), Gaps = 11/332 (3%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH---GPWPR 79
           +LFI GE+ + V GK    ++P T E I  I     EDVD AV+AAR+AF       W R
Sbjct: 9   QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWAR 68

Query: 80  FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            +GA R   +   A  I E    LA LE LD GK    A   D+   A    YYA  A+ 
Sbjct: 69  TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEA 127

Query: 140 IHGEV-----LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
           +  +      L M    +GY L+EP+GVVG I PWN+P  M   KV+PALAAGCT ++KP
Sbjct: 128 LDAKQKAPVSLPME-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 186

Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
           +E   +  L  A + +  G+P GVLNVV G G  AGA +ASH  +DK++FTGST  GR++
Sbjct: 187 SELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246

Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
           M AAA   +KPVSLELGGKSP+++FDDVD++ A + A+ G  +  G+IC A+SR+ V E 
Sbjct: 247 MTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHER 305

Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           I  EF +KLV+ AK   + DP +   R GP V
Sbjct: 306 IASEFLEKLVKWAKNIKISDPLEEGCRLGPVV 337

Length = 503

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  317 bits (813), Expect = e-105
 Identities = 147/325 (45%), Positives = 198/325 (60%), Gaps = 6/325 (1%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
             FI+GEFV S SG+TFET+ P T E +  +A G   DVD A KAA++AF    W     
Sbjct: 2   GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKA 59

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIH 141
           AER+  + K ADLIE+HA+ +AVLE LD G+     +   +  AA   R++A    + + 
Sbjct: 60  AERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMD 118

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           G    +   L  YT+R P+G VG I PWN P  +   K++PALA G T+++KPAE +PL 
Sbjct: 119 GRTYPVDTHLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLT 177

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           A   A +AK AG+PDGV N+V GFG  AG A+ +H D+  VSFTG T  G  +M+  A +
Sbjct: 178 AARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT 237

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
            LK  S+ELGGKSP+++FDD D+  A D  +  I    GE C ASSR+ VQE I ++F +
Sbjct: 238 -LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVE 296

Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQV 346
           KLVE+ +A  VG P DP    GP +
Sbjct: 297 KLVERVRAIRVGHPLDPETEVGPLI 321

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  315 bits (809), Expect = e-105
 Identities = 140/306 (45%), Positives = 182/306 (59%), Gaps = 9/306 (2%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
           +DP TGE IA + +    DVD AV AA  AF    W R + AER   +LK AD IEE+AE
Sbjct: 2   VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT---LRE 158
            LA LE+ + GK     +  ++PGA +  R++AGAA  + G        L G+T    RE
Sbjct: 60  ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPA--AGEYLPGHTSMIRRE 117

Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 218
           PIGVV  I PWN+P  M   K++PALAAG T+++KP+E TPL  L  A LA    +P GV
Sbjct: 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAA-EVLPPGV 176

Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
           +NVV G G +AG A+ +H  +  VS TGS   G++V +AAA   LK V LELGGK+P+++
Sbjct: 177 VNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIV 235

Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
           FDD D++ A         +N G+ C A+ RVYV E +YDEF   LVE   A  VGDP D 
Sbjct: 236 FDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDE 295

Query: 339 AVRQGP 344
               GP
Sbjct: 296 DTEMGP 301

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  312 bits (802), Expect = e-104
 Identities = 136/306 (44%), Positives = 184/306 (60%), Gaps = 5/306 (1%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
            I+P TGE +A +     EDVDLAVK+A+ A     W   SG ER  I+ K ADL+ E  
Sbjct: 1   VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
           + +A LE +D GK    A++ DI  +A+ L YYAG A  + GE + +      YT REP+
Sbjct: 59  DEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           GV   I  WN+P  +   K +PALA G  M+ KP+  TPL AL  A +   AG+PDGV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177

Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
           VV G G T G  +  H D+ KVSFTGS   G++VM AAA   +K V+LELGGKSPL+IFD
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFD 235

Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
           D D+  A + A++    ++G++C   +RV+VQ  I DEF ++LVE+ K   +GDP D   
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295

Query: 341 RQGPQV 346
           + G  +
Sbjct: 296 QMGALI 301

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  302 bits (774), Expect = 1e-99
 Identities = 142/323 (43%), Positives = 202/323 (62%), Gaps = 14/323 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
            FING++V   + K+F TI+P TGE +A + + ++EDVD AV AAR AF+   W    G 
Sbjct: 24  HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
            R   + + A  I++H  + AVLE+LD GK    ++  DIP  A    ++AG A      
Sbjct: 82  VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL---- 137

Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
              +   L G+   +P+GVVG I+PWNFP  M   K+ PALA G T+++KPAE TPL AL
Sbjct: 138 ---LDTELAGW---KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191

Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
            FA +   AG+P GVLN+V G   + G+A+A+H  +DKV+FTGST+VGR + +A A +  
Sbjct: 192 LFAEICAEAGLPPGVLNIVTG-NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249

Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K +SLELGGKSP ++FDD D+++A +  +  I FN+G++C A SR+ VQE + +E  +KL
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309

Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
            E+     VGDP D A+  G  V
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIV 332

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  293 bits (752), Expect = 3e-96
 Identities = 139/324 (42%), Positives = 187/324 (57%), Gaps = 8/324 (2%)

Query: 25  FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           +I+GE+V    G+  E  +P  T + + + A    ED D A+ AA  AF    W R S  
Sbjct: 4   YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
            R  I+ K  D +E   E LA L   + GK    A  G++  A    RYYAG A ++ GE
Sbjct: 60  ARADILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGE 118

Query: 144 VLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
            L  +R  ++  T REP+GVVG I PWNFP  +   K++PALA G T++ KPAE TP  A
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178

Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
                + + AG+P GV N+V G G   G A+  H D+D VSFTGST VGR++  AAA + 
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI-AAAAAAR 237

Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
              V LE+GGK+PL++ DD D++ A + A+ G  F+ G+ C ASSR+ V EGI+D F + 
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297

Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
           LVE+ KA  VGD  D  V  GP V
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVV 321

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  290 bits (745), Expect = 3e-95
 Identities = 120/310 (38%), Positives = 162/310 (52%), Gaps = 7/310 (2%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
           I+P T E I    +    DVD A+ AAR+AFD G W      ER   + +  + +E   E
Sbjct: 2   INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWST-DAEERARCLRQLHEALEARKE 60

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV---LKMSRALQGYTL-- 156
            L  L   + G     A+   + G    LRY+A  AD    E    +   R   G  +  
Sbjct: 61  ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120

Query: 157 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 216
           REP+GVV  I PWNFP  +   K++PALAAG T+++KPA  TPL AL    +     +P 
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPA 180

Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
           GV+NVV G     G A+ +   +D VSFTGST VGR++M  AA + LK V LELGGKS  
Sbjct: 181 GVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSAN 239

Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
           ++ DD D+  AA  A+   + N G+ C  ++R+ V    YDE  + L    +A  VGDP 
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPA 299

Query: 337 DPAVRQGPQV 346
           DP    GP +
Sbjct: 300 DPGTVMGPLI 309

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  288 bits (740), Expect = 1e-94
 Identities = 129/300 (43%), Positives = 179/300 (59%), Gaps = 5/300 (1%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
            I+P TG+ I  +      DVD AV AA+ AF    W      ER  ++ + AD +E  +
Sbjct: 1   VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
           E LA L AL+ G         +    A+  RY+ G A ++ GE L     +  YT+REP+
Sbjct: 59  EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPL 118

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           GVVG I+PWN P  +  +K++PAL AG T+++K AE  PL  L  A +     +P GVLN
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILA-QVLPAGVLN 177

Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
           V+ G+G   GAA+  H D+DKV+FTGST+VG+ + +AAA   L PVSLELGGKSP+++F 
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFP 236

Query: 281 DVDVNTAADMALLGILFNK-GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339
           D D++ A D A+ G+ F + G+ C A SR++V E IYD F +KLV K     +GDP D A
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEA 296

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  287 bits (737), Expect = 5e-94
 Identities = 143/329 (43%), Positives = 187/329 (56%), Gaps = 13/329 (3%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FI GE+V  V G+ F+ I P TG+    +     ED++LA+ AA  A +   W + S AE
Sbjct: 4   FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAE 61

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+ K AD +E + E+LAV E  D GK        DIP A +  RY+AG      G +
Sbjct: 62  RANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI 121

Query: 145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 204
            ++      Y   EP+GVVG IIPWNFP  M   K++PALAAG  +++KPAEQTP   L 
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181

Query: 205 FAHLAKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
              L +L G  +P GV+NVV GFG  AG  +AS   I KV+FTG T  GR +MQ  A+ N
Sbjct: 182 ---LMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQ-YASEN 237

Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAA--DMALLGIL---FNKGEICVASSRVYVQEGIYD 317
           + PV+LELGGKSP + F DV     A  D AL G +    N+GE+C   SR  +QE IYD
Sbjct: 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQESIYD 297

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            F ++ +E+ KA   G+P D     G Q 
Sbjct: 298 RFMERALERVKAIKQGNPLDTETMIGAQA 326

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  286 bits (733), Expect = 2e-93
 Identities = 138/327 (42%), Positives = 189/327 (57%), Gaps = 9/327 (2%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
            FI+G  V   S K  +  +P T + IA +A   + DVD AV +A +AF    W + + A
Sbjct: 2   HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAF-VSAWAKTTPA 60

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  I+L+ ADLIE+H E LA LE L +GK    ++  ++  +AN LRY+AG A KI+GE
Sbjct: 61  ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120

Query: 144 VLKMSRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
            L  S           +T REP+GVV  I+PWNF   +   K+  ALA GCT+++KP+E 
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180

Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
           TPL  L  A LAK AG+PDGVLNVV G G   GA + SH D+ KVSFTGS   G+++   
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKI-GR 238

Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
            A S+L  V+LELGGK+      D D++   +  L     ++G++C A  R YV    +D
Sbjct: 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           E   KL +   ++ VG P D +V  GP
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGP 325

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  285 bits (730), Expect = 1e-92
 Identities = 136/325 (41%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           T+  I G++ D+  GKTF   +P TGE IA +    + + + A+ +A  AF    W + +
Sbjct: 25  TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKI 140
            +ER  I+ ++ DLI  + E LA L  L+ GK     + +G++   A+ L Y+A  A ++
Sbjct: 83  ASERSKILRRWYDLIIANKEDLAQLMTLEQGK--PLKEAIGEVAYGASFLEYFAEEAKRV 140

Query: 141 HGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
           +G+++       +   L++P+GVVG I PWNFP  M   KV PALAAGCT++VKP+E TP
Sbjct: 141 YGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTP 200

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           L AL  A LA  AG+P GVLNVV G  P  G A+ +   + K++FTGST VG+++M A A
Sbjct: 201 LTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM-AGA 259

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
            + +K VSLELGG +P ++FDD D++ A   AL     N G+ CV ++R+ VQEGIYD+F
Sbjct: 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKF 319

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGP 344
            +   +  +  VVGD F+  V QGP
Sbjct: 320 AEAFSKAVQKLVVGDGFEEGVTQGP 344

Length = 498

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  281 bits (722), Expect = 5e-92
 Identities = 131/303 (43%), Positives = 170/303 (56%), Gaps = 8/303 (2%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
           I+P TGE  A      +  +D AV AA+ AF    W      ERR  +L  AD IE +AE
Sbjct: 2   INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIG 161
            LA L  L+ GK  + A   ++ GA   LRY A        EV++     +    R+P+G
Sbjct: 60  ELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD--EVIEDDDTRRVELRRKPLG 116

Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
           VV  I+PWNFP  +   K++PAL AG T+++KP+  TPL  L    LA+   +P GVLNV
Sbjct: 117 VVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNV 175

Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
           V G G   G A+ SH DI K+SFTGST  G++VM +AA   LK V+LELGG    ++  D
Sbjct: 176 VSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLPD 233

Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
           VD++  A     G   N G++C A  R+YV E IYDEF + LV  AKA VVGD  DP   
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTT 293

Query: 342 QGP 344
            GP
Sbjct: 294 LGP 296

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  277 bits (711), Expect = 4e-90
 Identities = 131/329 (39%), Positives = 186/329 (56%), Gaps = 16/329 (4%)

Query: 25  FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           +I GE+VDS SG+TF++ +P    E +         DVD AV+AAR+AF    W +    
Sbjct: 2   YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
            R   + + A+L+++  E LA L   + GK  +  + GD+  A +  +Y AG   ++ GE
Sbjct: 60  RRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGE 118

Query: 144 VL------KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
            +      K +      T R+PIGVV  I PWNFP  +   K+ PAL  G T++ KPAE 
Sbjct: 119 TVPSELPNKDA-----MTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAED 173

Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
           TP  AL    L   AG+P GV+NVV G G   G A+  H D+D VSFTGST+VG ++ + 
Sbjct: 174 TPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGET 233

Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
            A  N K V+LE+GGK+P+++ DD D++ A + AL       G+ C A+SR+ V E +YD
Sbjct: 234 CARPN-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYD 292

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           EF K+ VE+AK   VGD  D     GP +
Sbjct: 293 EFLKRFVERAKRLRVGDGLDEETDMGPLI 321

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  277 bits (711), Expect = 5e-90
 Identities = 137/326 (42%), Positives = 179/326 (54%), Gaps = 11/326 (3%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FING FV+S  GKTF  I+P  G  IAR+ E    +VD AV AAR A   GPW + + AE
Sbjct: 4   FINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAE 60

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  ++   AD IE   +     E  D GK  S A   DIP  A   R +A        E 
Sbjct: 61  RADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTEC 120

Query: 145 LKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
            +M       AL  Y +R+P+GVVG I PWN P  +   KV PALA G T++VKP+E+TP
Sbjct: 121 FEMATPDGKGALN-YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
             A     +    GVP GV NVV GFGP +AG  +  H  +D ++FTG T  G  +M+AA
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239

Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
           A   +KPVS ELGGK+  ++F D D + A    L     N G++C+ + RVYV+  I+D 
Sbjct: 240 ADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDR 298

Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGP 344
           F   L  +A++  +G P DPA   GP
Sbjct: 299 FVAALKARAESLKIGVPDDPATNMGP 324

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  275 bits (706), Expect = 1e-89
 Identities = 127/305 (41%), Positives = 172/305 (56%), Gaps = 4/305 (1%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
           +IDP TGE I   A+G   + + A+ AAR+AFD   W       R  ++L+ AD  E +A
Sbjct: 1   SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
           E LA L AL+ GK+   A   +I GA + LRYYAG A    G +++         LREP+
Sbjct: 60  ERLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPM 118

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDGVL 219
           GV G I+PWN P  +    ++PALAAGCT++VKPA QT  I A     LA++  +P GV+
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178

Query: 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
           N+    G    A + +  D+D +SFTGST  GR +M AAA   LK + LELGGK+P ++F
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVF 237

Query: 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339
           DD D++ A       +    G+ C+A SRV VQ  I DE   +L  +  A  VG   DPA
Sbjct: 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPA 297

Query: 340 VRQGP 344
              GP
Sbjct: 298 SDMGP 302

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  272 bits (697), Expect = 2e-88
 Identities = 125/304 (41%), Positives = 188/304 (61%), Gaps = 6/304 (1%)

Query: 43  DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
           +P TGE I  + +   ++ + A++AA +AF    W   +  ER  ++ K+ +L+ E+ + 
Sbjct: 3   NPATGEIIGSVPDQGVDETEAAIRAAYEAFK--TWRATTAKERSSLLRKWYNLMMENKDD 60

Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ-GYTLREPIG 161
           LA L  L+ GK    AK G+I  AA+ L ++A  A +++G+ +   ++ +    +++P+G
Sbjct: 61  LARLITLENGKPLKEAK-GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119

Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
           V   I PWNFP  M   K   ALAAGCT++VKPAEQTPL AL  A LA+ AG+P GVLNV
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179

Query: 222 VPG-FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
           + G      G  + +   + K+SFTGST+VG+ +M+ +A S +K VS+ELGG +P ++FD
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIVFD 238

Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
           D D++ A + A+     N G+ CV ++R+YV +GIYDEF KKL E  K   VG+  D  V
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298

Query: 341 RQGP 344
            QGP
Sbjct: 299 TQGP 302

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  272 bits (697), Expect = 3e-88
 Identities = 122/312 (39%), Positives = 170/312 (54%), Gaps = 13/312 (4%)

Query: 39  FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIE 97
            E I P  GE I R+    +EDV+ A+ AA++        P +   ER  I+ + A L+E
Sbjct: 1   IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAY---ERAEILERAAQLLE 57

Query: 98  EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQ 152
           E  E  A   AL+AGK    A+  ++  A  TLR  A  A ++ GE +            
Sbjct: 58  ERREEFARTIALEAGKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRI 116

Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
           G+T+REPIGVV  I P+NFP  +   KV PA+AAG  +++KPA QTPL AL  A L   A
Sbjct: 117 GFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEA 176

Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
           G+P G LNVV G G T G A+ +   +  +SFTGS  VG  + + A    LK V+LELG 
Sbjct: 177 GLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGS 233

Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
            + +++  D D+  A +  + G   N G++C++  R++V E IYDEF ++ V   K  VV
Sbjct: 234 NAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVV 293

Query: 333 GDPFDPAVRQGP 344
           GDP D     GP
Sbjct: 294 GDPLDEDTDVGP 305

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  271 bits (695), Expect = 6e-88
 Identities = 117/307 (38%), Positives = 177/307 (57%), Gaps = 5/307 (1%)

Query: 39  FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
           F+ ++P  G   AR+A G ++D + A+ AA  AF    W   + +ER  I+LK A+++E 
Sbjct: 1   FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58

Query: 99  HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLR 157
            A+ L  L   + G  +  A   +       LR  AG   ++ GE L          ++R
Sbjct: 59  RADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117

Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
            P+GVV  I P+N+P  +   KV+ ALAAG T+++KP+E+TP+I L  A + + AG+P G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177

Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
           V NVV G G   G  +     +  V+FTGST VGR++ + A   +LK ++LELGGK+PL+
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLI 236

Query: 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
           +  D D++ A   A  G   ++G+IC+++SR+ V+E +YDEF KK V +A    VGDP D
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296

Query: 338 PAVRQGP 344
           P    GP
Sbjct: 297 PDTVIGP 303

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  270 bits (693), Expect = 1e-87
 Identities = 137/308 (44%), Positives = 188/308 (61%), Gaps = 8/308 (2%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
            I+P TG+ +AR+      DVD AV AAR AF    W   +  ER  ++ + A  + EHA
Sbjct: 1   VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
           E LA+++ALD G   S A +GD+  AA  L Y+AG   ++ GE + +      YTLREP 
Sbjct: 59  EELALIDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117

Query: 161 GVVGHIIPWNFPTTMFFM-KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL 219
           GVV  I+ +N P  MF   K++  LAAG T++VKP EQ PL AL  A LA+   +P GV 
Sbjct: 118 GVVARIVAFNHP-LMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAR-EVLPPGVF 175

Query: 220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
           N++PG G TAGAA+  H D+ +++  GS   GR +M+AAA   +K V+LELGGK+ L++F
Sbjct: 176 NILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVF 234

Query: 280 DDVDVNTAADMALLGILFN-KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338
            D D   AAD A+ G+ F   G+ C ++SR++V E IYDE   ++VE+  A  VGDP DP
Sbjct: 235 PDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDP 294

Query: 339 AVRQGPQV 346
           A   GP V
Sbjct: 295 ATTMGPLV 302

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  268 bits (687), Expect = 6e-87
 Identities = 118/292 (40%), Positives = 162/292 (55%), Gaps = 16/292 (5%)

Query: 60  DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
           DVD A  AA  A     W      ER  I+ K A+++EE  + +A     ++G     A 
Sbjct: 1   DVDRAYAAAAAAQ--KAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKA- 57

Query: 120 MGDIPGAANTLRYYAGAADKIHGEVL------KMSRALQGYTLREPIGVVGHIIPWNFPT 173
             ++  A   LR  AG   +  GE+L      K S        R P+GVVG I P+NFP 
Sbjct: 58  AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVR-----RVPLGVVGVISPFNFPL 112

Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPL-IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAA 232
            +    V+PALA G  +++KP  +TP+   L  A + + AG+P GVLNVVPG G   G A
Sbjct: 113 ILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDA 172

Query: 233 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 292
           +  H  +  +SFTGST VGR + + A   +LK V+LELGG +PL++ DD D++ A   A 
Sbjct: 173 LVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAA 231

Query: 293 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
            G   ++G+IC+A+ R+ V E +YDEF +KLV KAKA  VGDP DP    GP
Sbjct: 232 FGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGP 283

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  245 bits (627), Expect = 4e-77
 Identities = 119/332 (35%), Positives = 178/332 (53%), Gaps = 21/332 (6%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L I G+ V +   +  E+ +P    E +  + +  KE+ + AV+AAR AF    W R   
Sbjct: 35  LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIH 141
            ER  ++L+ A L+      LA    L+ GK  +WA+   D+  A + L YYA    ++ 
Sbjct: 91  EERARLLLRAAALLRRRRFELAAWMVLEVGK--NWAEADADVAEAIDFLEYYAREMLRLR 148

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           G  ++M        +  P+GV   I PWNFP  +     + AL  G T+++KPAE TP+I
Sbjct: 149 GFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVI 208

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 260
           A     + + AG+P GV+N +PG G   G  +  H D+  ++FTGS +VG ++ + AA  
Sbjct: 209 AAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKV 268

Query: 261 ----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---FN-KGEICVASSRVYVQ 312
                 LK V  E+GGK+ +++ +D D+    D A  GI+   F  +G+ C A SRV V 
Sbjct: 269 QPGQKWLKRVIAEMGGKNAIIVDEDADL----DEAAEGIVRSAFGFQGQKCSACSRVIVH 324

Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           E +YDEF ++LVE+ KA  VGDP DP V  GP
Sbjct: 325 ESVYDEFLERLVERTKALKVGDPEDPEVYMGP 356

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  242 bits (620), Expect = 1e-76
 Identities = 113/311 (36%), Positives = 172/311 (55%), Gaps = 9/311 (2%)

Query: 39  FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
            E  +P  GE I  +    +E+V  A++ A +A D          +R  I++K A+LIE 
Sbjct: 1   IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58

Query: 99  HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG----- 153
             E LA L  ++ GK    ++  ++       +  A  A  + GE + +           
Sbjct: 59  RKEELAKLLTIEVGKPIKQSR-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117

Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           +T+REPIGVVG I P+NFP  +F  K++PA+A G +++VKP+  TPL A+  A + + AG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177

Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
           +P GV+NVV G+G   G  I ++  ++ +SFTGST VG  +   A  +  K V+LELGG 
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGT-GKKVALELGGS 236

Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
            P+++  D D+  A  +A+ G   N G++C A  R+ V+E +YD+F K LVEK K   VG
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVG 296

Query: 334 DPFDPAVRQGP 344
           DP D +   GP
Sbjct: 297 DPLDESTDLGP 307

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  242 bits (620), Expect = 2e-76
 Identities = 109/325 (33%), Positives = 166/325 (51%), Gaps = 11/325 (3%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
            I GE+V S  G+TF + +P  GE IAR+     EDV+ AV AAR+AF    W +     
Sbjct: 2   VIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+ +  + + +  E L  L +L+ GK+      G++    +   Y  G +  ++G  
Sbjct: 59  RGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLT 117

Query: 145 LKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           +   R   +      P+GVVG I  +NFP  +     + AL  G T++ KP+E TPL A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177

Query: 204 ----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
                 A + +  G+P GV+N+V G G   G  +     +  VSFTGST+VGR+V +  A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
                 V LELGG + +++ DD D++ A    L   +   G+ C  + R+ V E +YDEF
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGP 344
            ++LV+  K   +GDP D     GP
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGP 320

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  237 bits (607), Expect = 1e-74
 Identities = 129/325 (39%), Positives = 178/325 (54%), Gaps = 10/325 (3%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           KL INGE V    G+     +P TGE I  IAE   E VD AV+AA  AF    W + + 
Sbjct: 3   KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
             R   +LK AD+IEE+A+V A LE+ + GK        +IP   +  R++AGAA  + G
Sbjct: 60  KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119

Query: 143 EVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
             L     L+G+T    R+P+GVV  I PWN+P  M   K++PALAAG  +++KP+E TP
Sbjct: 120 --LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP 177

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           L AL  A LAK    P GV+N++ G G T G  +  H  +  VS TGS   G  ++   A
Sbjct: 178 LTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
            S +K   +ELGGK+P+++FDD D++   +       +N G+ C A+ R+Y Q GIYD  
Sbjct: 237 PS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTL 295

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGP 344
            +KL         G P D +   GP
Sbjct: 296 VEKLGAAVATLKSGAPDDESTELGP 320

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  238 bits (608), Expect = 1e-74
 Identities = 125/321 (38%), Positives = 192/321 (59%), Gaps = 5/321 (1%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
            INGE++D+ +G+  +  +P  G+ +  + +   ++   A+ AA +A     W   +  E
Sbjct: 14  LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 71

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+ ++ +L+ EH + LA L  L+ GK  + AK G+I  AA+ + ++A    +I+G+ 
Sbjct: 72  RANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT 130

Query: 145 LKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           +   +A +    +++PIGV   I PWNFP  M   K  PALAAGCTM++KPA QTP  AL
Sbjct: 131 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190

Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A LA  AG+P GV NVV G     G  + S+  + K+SFTGST++GRQ+M+  A  ++
Sbjct: 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDI 249

Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K VSLELGG +P ++FDD D++ A + AL     N G+ CV ++R+YVQ+G+YD F +KL
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309

Query: 324 VEKAKAWVVGDPFDPAVRQGP 344
            +      +GD  +  V  GP
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGP 330

Length = 482

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  236 bits (605), Expect = 2e-74
 Identities = 115/311 (36%), Positives = 158/311 (50%), Gaps = 18/311 (5%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
            +P TGE +  +   D  +V  AV  AR A     W       R   +L++   + +HA+
Sbjct: 1   RNPATGEVLGEVPVTDPAEVAAAVARARAAQ--RAWAALGVEGRAQRLLRWKRALADHAD 58

Query: 102 VLAVLEALDAGKLHSWAKMG-DIPGAANTLRYYAGAADKI-------HGEVLKMSRALQG 153
            LA L   + GK    A  G ++  A   + + A  A ++        G ++   +A   
Sbjct: 59  ELAELLHAETGK--PRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVE 116

Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           Y    P GVVG I PWN+P       + PALAAG  +++KP+E TPL+    A     AG
Sbjct: 117 Y---RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAG 173

Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
            P GVL VV G G T  A I +   +DKV+FTGS   GR+VM AAA   L PV LELGGK
Sbjct: 174 PPQGVLQVVTGDGATGAALIDA--GVDKVAFTGSVATGRKVMAAAA-ERLIPVVLELGGK 230

Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
            P+++  D D+  AA  A+ G + N G+ C++  RVYV E +YDEF  +LV KA+A   G
Sbjct: 231 DPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPG 290

Query: 334 DPFDPAVRQGP 344
                    GP
Sbjct: 291 ADDIGDADIGP 301

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  236 bits (604), Expect = 4e-74
 Identities = 124/324 (38%), Positives = 175/324 (54%), Gaps = 16/324 (4%)

Query: 28  GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRG 87
           GE+ D  S +T + ++P TGE +A I    KEDVD A +AA  A     W      ER  
Sbjct: 1   GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAA--QKEWAATLPQERAE 58

Query: 88  IMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-- 145
           I+ K A ++EE  + +      ++G     A   +   A    R  A    ++ G +L  
Sbjct: 59  ILEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPS 117

Query: 146 ----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
               K +R       REP+GVVG I PWNFP  +    V+PALA G  +++KPA  TP+ 
Sbjct: 118 DVPGKENR-----VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPIT 172

Query: 202 A-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
             L  A + + AG+P GVLNVV G G   G A   H     +SFTGST VGR + + A  
Sbjct: 173 GGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR 232

Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
            +LK V+LELGG +P ++ +D D++ A + A+ G   ++G+IC+A +R+ V E +YDEF 
Sbjct: 233 -HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFV 291

Query: 321 KKLVEKAKAWVVGDPFDPAVRQGP 344
           +K VE+ KA   GDP DP    GP
Sbjct: 292 EKFVERVKALPYGDPSDPDTVVGP 315

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  234 bits (599), Expect = 3e-73
 Identities = 124/325 (38%), Positives = 176/325 (54%), Gaps = 8/325 (2%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
            KLFINGE+V+S + +  +  +P TGE IAR+     E+VD AV AA+ AF    W    
Sbjct: 1   LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATP 58

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             +R+ +M KF  L+EE+ + LA L  L+ GK  + A+ GD+      + +       + 
Sbjct: 59  VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLK 117

Query: 142 GEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           GE L+ ++R +  Y+ R+P+GVV  I P+NFP  +       A+A G T ++KP+E+ P 
Sbjct: 118 GEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPG 177

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            A+  A L + AG+PDGVLNVV G G  A  A+  H DI  VSF GST VG  +    A 
Sbjct: 178 AAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYI-YERAA 235

Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEF 319
           +N K V    G K+  ++  D D+   A+ AL+G  F   G+ C+A S         DE+
Sbjct: 236 ANGKRVQALGGAKNHAVVMPDADLEQTAN-ALVGAAFGAAGQRCMALSVAVAVGDEADEW 294

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGP 344
             KLVE+AK   VG   DP    GP
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGP 319

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  230 bits (590), Expect = 2e-72
 Identities = 105/286 (36%), Positives = 154/286 (53%), Gaps = 8/286 (2%)

Query: 60  DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
           D D AV+AA  AF    W +   +ERR I+LK ADL+E   +        + G   +WA 
Sbjct: 1   DADQAVEAAAAAF--PAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG 58

Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ-GYTLREPIGVVGHIIPWNFPTTMFFM 178
             ++  AA  LR  A    +I G  +   +       ++EP+GVV  I PWN P  +   
Sbjct: 59  F-NVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117

Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVV---PGFGPTAGAAIAS 235
            ++  LAAG T+++K +E +P        +   AG+P GVLNVV   P   P    A+ +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177

Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
           H  + KV+FTGST VGR + + AA  +LKPV LELGGK+P ++ +D D++ AA+ AL G 
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236

Query: 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
             N G+IC+++ R+ V E I DEF +KL   A+    G     ++ 
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLV 282

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  231 bits (591), Expect = 1e-71
 Identities = 122/316 (38%), Positives = 167/316 (52%), Gaps = 21/316 (6%)

Query: 31  VDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML 90
           VD  +G T E   P TGE +A +      DV+ A   AR A     W      ER  ++L
Sbjct: 26  VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83

Query: 91  KFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 148
           +F DL+ E+ E L  L  L+ GK   H++ ++ D+   A T RYYA  A K+    L   
Sbjct: 84  RFHDLVLENREELLDLVQLETGKARRHAFEEVLDV---ALTARYYARRAPKL----LAPR 136

Query: 149 R---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           R   AL   T    LR+P GVVG I PWN+P T+      PAL AG  +++KP  QTPL 
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           AL    L   AG+P  +  VV G GP  G A+  +   D + FTGST  GR + + A   
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
            L   SLELGGK+P+++ DD D++ AA  A+     N G++C++  R+YV E IYDEF +
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313

Query: 322 KLVEKAKAWVVGDPFD 337
             V   +A  +G  +D
Sbjct: 314 AFVAAVRAMRLGAGYD 329

Length = 524

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  227 bits (581), Expect = 4e-71
 Identities = 114/303 (37%), Positives = 161/303 (53%), Gaps = 14/303 (4%)

Query: 47  GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL 106
           G  +  +   D  DVD A   A  A     W      ER  ++ + ADL+EEHA+ +A  
Sbjct: 1   GAVLGEVGVADAADVDRAAARAAAA--QRAWAATPPRERAAVLRRAADLLEEHADEIADW 58

Query: 107 EALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHI 166
              ++G +   A   ++  A   L   AG   +  GE+L  +        R P+GVVG I
Sbjct: 59  IVRESGSIRPKAG-FEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117

Query: 167 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP-----LIALYFAHLAKLAGVPDGVLNV 221
            P+NFP  +    V+PALA G  +++KP  +TP     +IA  F      AG+P GVL+V
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFE----EAGLPAGVLHV 173

Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD 281
           +PG G  AG A+    ++  +SFTGST VGR+V +AA   +LK VSLELGGK+ L++ DD
Sbjct: 174 LPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDD 231

Query: 282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR 341
            D++ AA     G   ++G+IC+A+ R  V E + D +  KL  KAK   VGDP    V 
Sbjct: 232 ADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVA 291

Query: 342 QGP 344
            GP
Sbjct: 292 LGP 294

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  222 bits (569), Expect = 6e-69
 Identities = 114/329 (34%), Positives = 165/329 (50%), Gaps = 15/329 (4%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP--WPRF 80
           K  INGE+ +S SGKT E   P  GE I  +      ++    +AA  A+D G   WP  
Sbjct: 3   KYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEIL---EAAETAYDAGRGWWPTM 58

Query: 81  SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
              ER   + KFADL++E+ E +A L   + GK    A + ++    + +R       ++
Sbjct: 59  PLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRL 117

Query: 141 HGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
            G+ L       ++       REP+GVV  I P+N+P  +   K+ PAL  G T++ KPA
Sbjct: 118 DGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPA 177

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
            Q  L+ +  A     AG P GV+NVV G G   G  + +H  ID +SFTGST+VG ++ 
Sbjct: 178 TQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           +      +K + LELGGK P ++  D D+  AA   + G L   G+ C A  RV V E +
Sbjct: 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESV 294

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
            DE  + L E+     VG P+D  V   P
Sbjct: 295 ADELVELLKEEVAKLKVGMPWDNGVDITP 323

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  221 bits (565), Expect = 2e-68
 Identities = 114/312 (36%), Positives = 162/312 (51%), Gaps = 14/312 (4%)

Query: 39  FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98
            E  +P TGE +AR+A    +D++ A+ AA +AF   P        R  I+L     +EE
Sbjct: 1   LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58

Query: 99  HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQG 153
             E LA    L+AGK    A+ G++  A +T R  A  A +I+GEVL +         QG
Sbjct: 59  RFEELAETIVLEAGKPIKDAR-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117

Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
              R PIG V  I P+NFP  +   KV+PA+AAGC  ++KPA +TPL AL    +    G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177

Query: 214 VPDGVLNVVPGFGPTAGAAI-ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
           +P G  +V+P       A +  +   I  +SFTGS  VG  +   A     K V LELGG
Sbjct: 178 LPKGAFSVLP--CSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232

Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
            + +++  D D++ AA   + G  +  G+ C++  RV V   +YDEF+ +LV + KA   
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292

Query: 333 GDPFDPAVRQGP 344
           GDP D A   GP
Sbjct: 293 GDPKDDATDVGP 304

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  220 bits (562), Expect = 4e-68
 Identities = 115/310 (37%), Positives = 165/310 (53%), Gaps = 14/310 (4%)

Query: 40  ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99
           E  +P TGE +  +  G +E +  A+  A            +  +R  I+ K A L+E  
Sbjct: 2   EVRNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEAR 56

Query: 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGY 154
            E  A L  L++G         ++  AA+ LR+ A  A +  GE          +A + +
Sbjct: 57  REEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIF 115

Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
           TLREP+GVV  I P+N P      K++PA+AA   +++KP+E+TPL A+Y A L   AG+
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175

Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
           P  +L+VV G     G  + +H D+D V+FTG   VG+ +   AAT+  K   LELGG  
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGND 232

Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
           PL++ DD D+  AA +A+ G   N G+ C A  R+ V E + DEF   LVEK+ A VVGD
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292

Query: 335 PFDPAVRQGP 344
           P DPA   G 
Sbjct: 293 PMDPATDMGT 302

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  218 bits (557), Expect = 2e-67
 Identities = 110/312 (35%), Positives = 171/312 (54%), Gaps = 11/312 (3%)

Query: 40  ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99
           +  +P  GE I ++   D+ D + A+  AR   ++         ER  I+ + ADL+++ 
Sbjct: 2   DVHNPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKR 59

Query: 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGY 154
           AE  A + A + GK    A+  ++  A +TLR  A  A++I GE + +     S     +
Sbjct: 60  AEEFAKIIACEGGKPIKDAR-VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAW 118

Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
           T+REP+GVV  I P+NFP  +   K++PA+A GC +++KPA +TPL AL  A +   AGV
Sbjct: 119 TIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGV 178

Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
           P+GVL VV G     G A A+   +  +SFTGS  VG  +   A     K ++LELGG +
Sbjct: 179 PEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG---GKRIALELGGNA 235

Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
           P+++  D D++ A +    G  ++ G++C++  R+YV E +YDEF +  V   K   VGD
Sbjct: 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGD 295

Query: 335 PFDPAVRQGPQV 346
           P D     GP +
Sbjct: 296 PLDEDTDVGPLI 307

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  218 bits (557), Expect = 3e-67
 Identities = 113/305 (37%), Positives = 158/305 (51%), Gaps = 21/305 (6%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
             P TGE +  + +    DV+ A   AR A     W     AER  + L+F DL+ E  +
Sbjct: 1   EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRD 58

Query: 102 VLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR---ALQGYT- 155
            L  L  L+ GK   H++ ++ D    A   RYYA  A++    +LK  R   A+   T 
Sbjct: 59  ELLDLIQLETGKARRHAFEEVLD---VAIVARYYARRAER----LLKPRRRRGAIPVLTR 111

Query: 156 ---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
               R P GVVG I PWN+P T+      PAL AG  +++KP  QT L AL+   L   A
Sbjct: 112 TTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEA 171

Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
           G+P  +  VV G G   G AI  + D   V FTGST  GR V + A    L   SLELGG
Sbjct: 172 GLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAG-RRLIGCSLELGG 228

Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
           K+P+++ +D D++ AA  A+     N G++CV+  R+YV E +YDEF ++ V + +A  +
Sbjct: 229 KNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRL 288

Query: 333 GDPFD 337
           G   D
Sbjct: 289 GAALD 293

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  214 bits (547), Expect = 6e-66
 Identities = 112/313 (35%), Positives = 152/313 (48%), Gaps = 20/313 (6%)

Query: 42  IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101
           I P  G  IA       E V  A++ AR A     W      ER+ I+ +  +L+  + +
Sbjct: 1   ISPIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTD 58

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-----LQGYTL 156
            +A       G+  + A  G+I G     RY    A+    E L   R       + Y  
Sbjct: 59  EIAEELTWQMGRPIAQAG-GEIRGMLERARYMISIAE----EALADIRVPEKDGFERYIR 113

Query: 157 REPIGVVGHIIPWNFPTTMFFMKVS---PALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           REP+GVV  I PWN+P   +   V+   PAL AG  +I+K + QTPL    FA     AG
Sbjct: 114 REPLGVVLIIAPWNYP---YLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAG 170

Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
           +P+GV  V+     T+ A IA    ID VSFTGS   GR + +AAA      V LELGGK
Sbjct: 171 LPEGVFQVLHLSHETSAALIADP-RIDHVSFTGSVAGGRAIQRAAA-GRFIKVGLELGGK 228

Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
            P  +  D D++ AA+  + G  FN G+ C +  R+YV E IYD F +  V   K + +G
Sbjct: 229 DPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLG 288

Query: 334 DPFDPAVRQGPQV 346
           DP DP+   GP V
Sbjct: 289 DPLDPSTTLGPVV 301

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  204 bits (521), Expect = 3e-62
 Identities = 107/285 (37%), Positives = 146/285 (51%), Gaps = 7/285 (2%)

Query: 61  VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
           ++ A+  A  AF    W + S AER  ++ K ADL+ E  + LA L  L+ GK  + A+ 
Sbjct: 1   IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR- 57

Query: 121 GDIPGAANTLRYYA-GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
            ++   A   RYYA  A   +  E ++ + A + Y   EP+GVV  I+PWNFP    F  
Sbjct: 58  AEVEKCAWICRYYAENAEAFLADEPIE-TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRF 116

Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
            +P L AG T+++K A   P  AL    L + AG P+GV   +        A IA    +
Sbjct: 117 AAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPR-V 175

Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
             V+ TGS   GR V   A   NLK   LELGG  P ++ DD D++ A   A+ G L N 
Sbjct: 176 RGVTLTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234

Query: 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           G+ C+A+ R  V E +YDEF +K VE   A  VGDP D     GP
Sbjct: 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGP 279

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  203 bits (517), Expect = 3e-61
 Identities = 116/329 (35%), Positives = 160/329 (48%), Gaps = 9/329 (2%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           ++L I+G+ V   +G TF T++P T E +   A+    D+D A+ AAR+AFD   W R +
Sbjct: 1   SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
               R +  +  D +  H E L  L   + G          + G  + L + A  A+   
Sbjct: 60  ALRVRCLR-QLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYA 118

Query: 142 -----GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
                G    M    +    RE +GVVG I PWNFP  +   K+ PALAAG T+++KPA 
Sbjct: 119 WTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178

Query: 197 QTPLIALYFAHL-AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
            TP  A     L A+    P GV+N+V       GA +A    +D VSFTGST  GR VM
Sbjct: 179 DTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM 238

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
             AA + LK V LELGGKS  ++ DD D+  A  MA   +  + G+ C  ++R+ V    
Sbjct: 239 ADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRAR 297

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           YDE          +   GDP DP    GP
Sbjct: 298 YDEAVAAAAATMGSIKPGDPADPGTVCGP 326

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  192 bits (489), Expect = 9e-58
 Identities = 92/258 (35%), Positives = 145/258 (56%), Gaps = 4/258 (1%)

Query: 89  MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 148
           + K A  I E A  ++ L   + GK+   A++ ++   A+ + Y A  A +  GE+++  
Sbjct: 1   LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD 59

Query: 149 RALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
           R  +     +  +GV   I+PWNFP  +   K++PAL  G T+++KP+E TP  A+ FA 
Sbjct: 60  RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119

Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
           +    G+P GV N+V G G T G  +A +  +  VS TGS   G ++M AAA  N+  V 
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAA-KNITKVC 178

Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
           LELGGK+P ++ DD D++ A    +   + N G++C  + RVYVQ+GIYD+F  +L E  
Sbjct: 179 LELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238

Query: 328 KAWVVGDPFD-PAVRQGP 344
           +A   G+P +   +  GP
Sbjct: 239 QAVQFGNPAERNDIAMGP 256

Length = 409

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  188 bits (479), Expect = 2e-55
 Identities = 110/330 (33%), Positives = 167/330 (50%), Gaps = 17/330 (5%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L I GE + +       +I+P    E + R+++  KE  + A++AA +AF+   W ++S 
Sbjct: 39  LIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSP 94

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKI- 140
            +R  I+L+ A +I       +     +AGK   WA+   D   A + L YYA    K+ 
Sbjct: 95  EDRARILLRAAAIIRRRKHEFSAWLVKEAGK--PWAEADADTAEAIDFLEYYARQMLKLA 152

Query: 141 HGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
            G+ V         Y    P+GV   I PWNFP  +       A+ AG T+++KPA  TP
Sbjct: 153 DGKPVESRPGEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTP 211

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           +IA  F  + + AG+P GV+N VPG G   G  +  H     ++FTGS +VG ++ + AA
Sbjct: 212 VIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271

Query: 260 TSN-----LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
                   LK V  E+GGK  +++ +D D++ AA+  +       G+ C A SR  V E 
Sbjct: 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHED 331

Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           +YDE  +K+VE  K   VG+P D A   GP
Sbjct: 332 VYDEVLEKVVELTKELTVGNPEDNAY-MGP 360

Length = 514

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  185 bits (470), Expect = 2e-54
 Identities = 108/328 (32%), Positives = 166/328 (50%), Gaps = 21/328 (6%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD--HGPWPRFS 81
           L I GE V     +  E   P  G  +  + +   +DV       R+AF       P  +
Sbjct: 6   LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDV-------RRAFAIAAAYRPTLT 56

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             ER  I+ + A L+    E ++ L  L++G L     + ++   A+ L + A  A +  
Sbjct: 57  RYERSAILDRAAALLAARKEEISDLITLESG-LSKKDSLYEVGRVADVLTFAAAEALRDD 115

Query: 142 GEVLKMSRALQG-----YTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
           G++        G     +T REP+ GV+  I P+N P      K++PA+A    M+VKP+
Sbjct: 116 GQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPS 175

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           E+TPL ALY A +   AG+P  +L VV G        + ++  +D V+FTG   +G+ + 
Sbjct: 176 EKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI- 234

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
             AA +  +   LELGG  PL++ +D D++ AAD+A+ G   N G+ C A  R+ VQE +
Sbjct: 235 --AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESV 292

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
            D F + LVEK +AW  GDP DP+V  G
Sbjct: 293 ADRFTELLVEKTRAWRYGDPMDPSVDMG 320

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  179 bits (457), Expect = 5e-52
 Identities = 114/325 (35%), Positives = 159/325 (48%), Gaps = 11/325 (3%)

Query: 25  FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
            INGE  ++  G+    IDP      I  ++  D EDVD A+  A  AF    W      
Sbjct: 36  IINGEETET--GEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAF--AGWSATPVE 91

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  I+ K ADL+E +   L  L A +AGK  + A   ++  A +  RYYA  A ++  +
Sbjct: 92  ERAEILEKAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSD 150

Query: 144 VLKMSR--ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
                    L G  L    GV   I PWNFP  +F  +++ ALAAG T+I KPAEQTPLI
Sbjct: 151 PELPGPTGELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLI 209

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ--AAA 259
           A     L   AGVP  VL +VPG G   G A+ +H  ID V FTGST+  + + +  A  
Sbjct: 210 AARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAER 269

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
              + P+  E GGK+ +++        A    +     + G+ C A   +Y+QE I + F
Sbjct: 270 DGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERF 329

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGP 344
            + L     +  VGDP+D +   GP
Sbjct: 330 IEMLKGAMASLKVGDPWDLSTDVGP 354

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  178 bits (453), Expect = 5e-52
 Identities = 103/319 (32%), Positives = 152/319 (47%), Gaps = 32/319 (10%)

Query: 43  DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102
           DP TG+ +  +     EDVD A+ AAR A     W + S AERR ++      I E+ E 
Sbjct: 2   DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59

Query: 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ---------- 152
           +  +   D GK    A +G+I      +R+        HGE     +AL+          
Sbjct: 60  ICRVACRDTGKTMVDASLGEILVTCEKIRWTLK-----HGE-----KALRPESRPGGLLM 109

Query: 153 ----GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 208
                    EP+GVVG I+ WN+P       +  AL AG  ++VK +EQ    + +F  +
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169

Query: 209 AKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 264
            +      G    ++ +V     T   A+ SH  ID ++F GS  VG++VM AAA S L 
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227

Query: 265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 324
           PV LELGGK P ++ DD D++  A + + G   + G+ C+   RV V E IYD+  + L 
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287

Query: 325 EKAKAWVVGDPFDPAVRQG 343
           ++ +A   G P D  V  G
Sbjct: 288 DRVQALRQGPPLDGDVDVG 306

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  179 bits (455), Expect = 6e-52
 Identities = 99/331 (29%), Positives = 158/331 (47%), Gaps = 14/331 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L INGE V++   K   +I+P    E +  +++  +E  + A++AA +AF+   W +   
Sbjct: 35  LVINGERVET-ENK-IVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFE--AWKKTDP 90

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-- 140
            ER  I+ K A ++       + L   + GK  + A   ++  A + + YYA    ++  
Sbjct: 91  EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADA-EVAEAIDFMEYYARQMIELAK 149

Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
              V         Y +  P GV   I PWNFP  +        +  G  +++KPAE  P+
Sbjct: 150 GKPVNSREGETNQY-VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA- 259
           IA  F  + + AG+P GV+  VPG G   G  +  H     ++FTGS +VG ++ + AA 
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268

Query: 260 ----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
                 +LK V  E+GGK  +++ +D D+  AA  A        G+ C A SR  V E +
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           YDE  ++ VE  ++  VG P    V  GP +
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVI 359

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score =  172 bits (437), Expect = 2e-49
 Identities = 112/328 (34%), Positives = 170/328 (51%), Gaps = 13/328 (3%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           L+ING+++    G+ FE+ +P +GE + +  +     VD AV+AAR AF    W R S  
Sbjct: 3   LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER+ I+ +FA L+EE+ E LA + A + GK   W    ++    N +     A  +  GE
Sbjct: 60  ERQAIVERFAALLEENKEELAEVIARETGKPL-WEAATEVTAMINKIAISIQAYHERTGE 118

Query: 144 VLKMSRALQGYT--LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
                  +      LR  P GVV    P+NFP  +    + PAL AG T++ KP+E TP 
Sbjct: 119 K---RSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPW 175

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
           +A     L + AG+P GVLN+V G G   G A+A+H DID + FTGS + G  + +  A 
Sbjct: 176 VAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234

Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEF 319
              K ++LE+GG +PL+I +  D++ A  + +     + G+ C  + R+ V +G   D F
Sbjct: 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAF 294

Query: 320 EKKLVEKAKAWVVGDPF-DPAVRQGPQV 346
             +LV  AK   VG    +P    G  +
Sbjct: 295 LARLVAVAKRLTVGRWDAEPQPFMGAVI 322

Length = 487

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  171 bits (436), Expect = 2e-49
 Identities = 103/323 (31%), Positives = 165/323 (51%), Gaps = 7/323 (2%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
             +I G+F +  SG      +P T E   ++A    ++VD AV +AR+ F    W + S 
Sbjct: 2   NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
           A+R  ++L++  L++EH + +A L   + GK HS A  GD+      + +  G    + G
Sbjct: 60  AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKG 118

Query: 143 EVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           E   +++  +  Y++R+P+GV   I P+NFP  +       A+A G T ++KP+E+ P  
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           A+  A L   AG PDGVLNVV G    A   +  H D+  VSF GST +GR +     ++
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHT-TGSA 236

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
           + K V    G K+ +++  D D + AAD  +       G+ C+A S   V  G  DE+  
Sbjct: 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVP 295

Query: 322 KLVEKAKAWVVGDPFDPAVRQGP 344
           ++ E+A+   +G   DP    GP
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGP 318

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  168 bits (427), Expect = 5e-48
 Identities = 107/335 (31%), Positives = 166/335 (49%), Gaps = 36/335 (10%)

Query: 27  NGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86
           +GE+     G    +I P  GE IAR+ +   ED +  +KAA++AF    W R   A +R
Sbjct: 4   DGEWG--GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--W-RDVPAPKR 58

Query: 87  G-IMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-----MGDIPGAANTLRYYAGAADKI 140
           G I+ +  D + +  E L  L +L+ GK+          M DI        +  G + ++
Sbjct: 59  GEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDI------CDFAVGLSRQL 112

Query: 141 HGEVLKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
           +G  +   R   G+ + E   P+GVVG I  +NFP  ++    + AL  G  ++ KP+  
Sbjct: 113 YGLTIPSERP--GHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPT 170

Query: 198 TPLIAL----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           TPL A+      A + +  G+P  + ++V G G   G A+     +  VSFTGST VGRQ
Sbjct: 171 TPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQ 229

Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF----NKGEICVASSRV 309
           V QA A +      LELGG + +++ +D D+    D+A+  +LF      G+ C  + R+
Sbjct: 230 VGQAVA-ARFGRSLLELGGNNAIIVMEDADL----DLAVRAVLFAAVGTAGQRCTTTRRL 284

Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
            V E IYDE  ++L +  K   +GDP D     GP
Sbjct: 285 IVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGP 319

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  165 bits (419), Expect = 3e-47
 Identities = 97/288 (33%), Positives = 145/288 (50%), Gaps = 5/288 (1%)

Query: 60  DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
            VD AV AAR AF    W   S  ER  I+ +FA+L++ + E LA L + + GK   W  
Sbjct: 1   QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGK-PLWEA 57

Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
             ++   A  +     A  +  GE        +      P GV+    P+NFP  +    
Sbjct: 58  QTEVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGH 117

Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
           + PAL AG T++ KP+E TP +A     L + AG+P GVLN+V G G   G A+A+H  I
Sbjct: 118 IVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGI 176

Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
           D + FTGS   G  + +  A    K ++LE+GG +PL+++D  D++ AA + +       
Sbjct: 177 DGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236

Query: 300 GEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           G+ C  + R+ V +G   D F ++LVE AK   +G P       GP +
Sbjct: 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLI 284

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  169 bits (430), Expect = 1e-46
 Identities = 116/333 (34%), Positives = 159/333 (47%), Gaps = 36/333 (10%)

Query: 31  VDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
           + +  G+    + P      +  +A  D E V+ A+ AAR AF    W R    ER  I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAF--PAWSRTPVEERAAIL 613

Query: 90  LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
            + ADL+E +   L  L   +AGK    A + ++  A +  RYYA  A ++ G       
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGA----PE 668

Query: 150 ALQGYT-----LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
            L G T     LR    GV   I PWNFP  +F  +V+ ALAAG T+I KPAEQTPLIA 
Sbjct: 669 KLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAA 728

Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
               L   AG+P  VL ++PG G T GAA+ +   I  V+FTGST+  R + +  A  + 
Sbjct: 729 EAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG 788

Query: 264 KPVSL--ELGGKSPLL---------IFDDVDVNTAADMALLGILFNKGEICVASSRV-YV 311
             V L  E GG++ ++         + DDV V +A   A        G+ C A  RV +V
Sbjct: 789 PIVPLIAETGGQNAMIVDSTALPEQVVDDV-VTSAFRSA--------GQRCSA-LRVLFV 838

Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           QE I D   + L        VGDP   +   GP
Sbjct: 839 QEDIADRVIEMLKGAMAELKVGDPRLLSTDVGP 871

Length = 1038

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  161 bits (409), Expect = 8e-46
 Identities = 97/284 (34%), Positives = 138/284 (48%), Gaps = 47/284 (16%)

Query: 69  RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA---GKLHSWAKMGDIPG 125
           + AF   P P  S  ERR  + +   L+ ++ + LA  EA+ A    +      + +I  
Sbjct: 8   KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALA--EAISADFGHRSRHETLLAEILP 63

Query: 126 AANTLRYYAGAADKIHG-------EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178
           +   +++   A   +          V  +    +     +P+GVVG I+PWN+P    ++
Sbjct: 64  SIAGIKH---ARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYP---LYL 117

Query: 179 KVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAGVPDGVLNVVPGFGP 227
            + P   ALAAG  +++KP+E TP        L+A YF          +  + VV G G 
Sbjct: 118 ALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYF---------DEDEVAVVTG-GA 167

Query: 228 TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287
              AA  S +  D + FTGST VGR VM+AAA  NL PV+LELGGKSP +I  D D+  A
Sbjct: 168 DVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKA 225

Query: 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
           A+    G L N G+ CVA   V V E   +EF    V  AKA V
Sbjct: 226 AERIAFGKLLNAGQTCVAPDYVLVPEDKLEEF----VAAAKAAV 265

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  157 bits (399), Expect = 6e-44
 Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 15/321 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L I GE+VD+       ++ P    E +   A+ DK + + A++AA  AF    W  +  
Sbjct: 21  LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAF--KTWKDWPQ 76

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIH 141
            +R  ++LK ADL+      L      + GK  +W + + D+  A + +RYYA AA ++ 
Sbjct: 77  EDRARLLLKAADLLRRRRRELIATLTYEVGK--NWVEAIDDVAEAIDFIRYYARAALRLR 134

Query: 142 G--EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
                +         +    +G    I PWNFP  +F   +   +A G T+I KPAE   
Sbjct: 135 YPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAV 194

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           ++      +   AG P GV+  +PG G   GA +  H  I  ++FTGS + G+++ +AAA
Sbjct: 195 VVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAA 254

Query: 260 -----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
                 +  K + +E GGK+ +++ +  D     +  ++     +G+ C A+SR+ + +G
Sbjct: 255 RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQG 314

Query: 315 IYDEFEKKLVEKAKAWVVGDP 335
            Y+   ++L+++A+   VG P
Sbjct: 315 AYEPVLERLLKRAERLSVGPP 335

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  154 bits (392), Expect = 3e-43
 Identities = 104/312 (33%), Positives = 144/312 (46%), Gaps = 18/312 (5%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
           TI+P TGE +        ++VD A+  A   F    +   + A+R       ADL+E  A
Sbjct: 5   TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--------KMSRALQ 152
           + +A L  L+ GK  + AK  +    A   RYYA      H E L            A +
Sbjct: 63  DQVAALMTLEMGKTLASAK-AEALKCAKGFRYYAE-----HAEALLADEPADAAAVGASR 116

Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
            Y   +P+GVV  ++PWNFP        +PAL AG   ++K A   P  ALY A L + A
Sbjct: 117 AYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176

Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
           G PDG    +   G  A  AI     +   + TGS   GR V   A    +K   LELGG
Sbjct: 177 GFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGG 234

Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
             P ++    D++ AA+ A+   + N G+ C+A+ R  V   +YD F +K V +  A  V
Sbjct: 235 SDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRV 294

Query: 333 GDPFDPAVRQGP 344
           GDP DP    GP
Sbjct: 295 GDPTDPDTDVGP 306

Length = 457

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score =  154 bits (390), Expect = 8e-43
 Identities = 107/316 (33%), Positives = 164/316 (51%), Gaps = 14/316 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           LFI+G++     G++F + +P T E + + A      V+ AV AAR AF    W R S  
Sbjct: 1   LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLE 57

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  ++ +FA L+EE  E LA + A + GK   W    ++      +     A  +  GE
Sbjct: 58  ERIAVVQRFAALLEERKEALARVIARETGK-PLWETRTEVASMIGKVAISIKAYHERTGE 116

Query: 144 V---LKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
               +   RA+    LR  P GVV    P+NFP  +    + PAL AG T++ KP+E TP
Sbjct: 117 SENPMPDGRAV----LRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTP 172

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
            +A     L + AG+P GVLN+V G     G A+A+H DID + FTGS++ G  + +  A
Sbjct: 173 WVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFA 231

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DE 318
               K ++LE+GG +PL++ +  D++ A  + +     + G+ C  + R+ V +G   D 
Sbjct: 232 GRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDA 291

Query: 319 FEKKLVEKAKAWVVGD 334
           F  +LVE A+   VG 
Sbjct: 292 FLARLVEVAERLTVGA 307

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  158 bits (401), Expect = 1e-42
 Identities = 111/327 (33%), Positives = 157/327 (48%), Gaps = 39/327 (11%)

Query: 32  DSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML 90
             V G T   ++P    + +  + E   EDV+ A+ AA+ AF    W     AER  I+ 
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619

Query: 91  KFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
           + ADL+E H   L  L   +AGK  + A  + ++  A + LRYYA  A           R
Sbjct: 620 RAADLMEAHMPELFALAVREAGK--TLANAIAEVREAVDFLRYYAAQA-----------R 666

Query: 150 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 209
            L      +P+G V  I PWNFP  +F  +++ AL AG T++ KPAEQTPLIA     L 
Sbjct: 667 RLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLL 726

Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL- 268
             AGVP   L ++PG G T GAA+ +   I  V FTGST+V R + +  A  +  PV L 
Sbjct: 727 HEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLI 786

Query: 269 -ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRV-YVQEGIYD 317
            E GG++ +++           DV + +A D A        G+ C A  RV  +QE + D
Sbjct: 787 AETGGQNAMIVDSSALPEQVVADV-IASAFDSA--------GQRCSA-LRVLCLQEDVAD 836

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGP 344
                L        +GDP+  +   GP
Sbjct: 837 RVLTMLKGAMDELRIGDPWRLSTDVGP 863

Length = 1208

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score =  155 bits (394), Expect = 5e-42
 Identities = 104/301 (34%), Positives = 146/301 (48%), Gaps = 34/301 (11%)

Query: 55  EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL 114
           E  + DV+ A++AA  A     W     AER  I+ + ADL+E     L  L   +AGK 
Sbjct: 146 EATEADVEQALEAAVAAAPI--WSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKT 203

Query: 115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTT 174
            S A + ++  A + LRYYAG A           R   G     P+G V  I PWNFP  
Sbjct: 204 LSNA-IAEVREAVDFLRYYAGQA-----------RDTFGNLTHRPLGPVVCISPWNFPLA 251

Query: 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA 234
           +F  +++ ALAAG +++ KPAEQTPLIA     L   AGVP GVL ++PG G T GAA+ 
Sbjct: 252 IFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALT 311

Query: 235 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLI---------FDDVD 283
           +   +  V FTGST+V R + +  A    +P+ L  E GG++ +++           DV 
Sbjct: 312 ADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADV- 370

Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
           + +A D A        G+ C A   + +QE + D     L        VG+P       G
Sbjct: 371 LASAFDSA--------GQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVG 422

Query: 344 P 344
           P
Sbjct: 423 P 423

Length = 769

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  146 bits (371), Expect = 3e-40
 Identities = 86/274 (31%), Positives = 128/274 (46%), Gaps = 18/274 (6%)

Query: 64  AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHSWAKMG 121
            V   R+ F  G     S   R+  +     ++ E+ E   +  AL  D GK  + A + 
Sbjct: 3   LVARLRETFLTGK--TRSLEWRKAQLKALKRMLTENEE--EIAAALYADLGKPPAEAYLT 58

Query: 122 DIPGAANTLRYY----AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177
           +I      + +               V  + +  + Y + EP+GVV  I PWN+P  +  
Sbjct: 59  EIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLAL 118

Query: 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG--VPDGVLNVVPGFGPTAGAAIAS 235
             +  A+AAG T+++KP+E  P  +   A LAKL         + VV G    A A +A 
Sbjct: 119 APLIGAIAAGNTVVLKPSELAPATS---ALLAKLIPKYFDPEAVAVVEGGVEVATALLAE 175

Query: 236 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 295
               D + FTGS  VG+ VM+AAA  +L PV+LELGGKSP ++  D ++  AA     G 
Sbjct: 176 PF--DHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGK 232

Query: 296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
             N G+ C+A   V V E I DE  ++L +  K 
Sbjct: 233 FLNAGQTCIAPDYVLVHESIKDELIEELKKAIKE 266

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  145 bits (368), Expect = 8e-40
 Identities = 106/318 (33%), Positives = 156/318 (49%), Gaps = 26/318 (8%)

Query: 40  ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEE 98
           E ++P   + I  +   D   +D A+  A   F D   W      ER  I+ + ADL+EE
Sbjct: 2   EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEE 59

Query: 99  HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQG 153
            A+ LA+L A + GK    AK+ ++  A + +   A    ++ G  + M     S     
Sbjct: 60  RADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118

Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           +T REPIGVV  I  +N P  +   +V+PA+AAGC +IVKPA  TPL  L F  L   AG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178

Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDK----VSFTGSTDVGRQVMQAAATSNLKP---V 266
           +P+G    VP        A+A  +  D      SF GS  VG  +      S L P    
Sbjct: 179 LPEGWCQAVP-----CENAVAEKLVTDPRVAFFSFIGSARVGWML-----RSKLAPGTRC 228

Query: 267 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326
           +LE GG +P+++    D++      + G  ++ G++CV+  RV+V   I D+F ++L   
Sbjct: 229 ALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAA 288

Query: 327 AKAWVVGDPFDPAVRQGP 344
           A+  VVGDP DP    GP
Sbjct: 289 AEKLVVGDPTDPDTEVGP 306

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score =  147 bits (371), Expect = 1e-39
 Identities = 109/323 (33%), Positives = 158/323 (48%), Gaps = 7/323 (2%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
            I G FV+S S    + I+P T E ++++     E+   AV AA+QAF    W       
Sbjct: 117 LIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITT 174

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R+ +MLKF +LI ++ + LA+    + GK       GDI      + +  G A    GE 
Sbjct: 175 RQRVMLKFQELIRKNMDKLAMNITTEQGKTLK-DSHGDIFRGLEVVEHACGMATLQMGEY 233

Query: 145 L-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           L  +S  +  Y++REP+GV   I P+NFP  +       A+  G T I+KP+E+ P  ++
Sbjct: 234 LPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASV 293

Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A LA  AG+PDGVLN+V G   T   AI    DI  VSF GS   G  +   AA    
Sbjct: 294 ILAELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG- 351

Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K +   +G K+  L+  D +++   +  L       G+ C+A S V V  G    +E KL
Sbjct: 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDKL 410

Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
           VE+AKA  V    +P    GP +
Sbjct: 411 VERAKALKVTCGSEPDADLGPVI 433

Length = 604

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score =  145 bits (368), Expect = 2e-39
 Identities = 97/301 (32%), Positives = 139/301 (46%), Gaps = 24/301 (7%)

Query: 50  IARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL 109
           + ++   +   V  A+ +A+QAF    W      ER   + + ADL+E H   L  L   
Sbjct: 65  VGQVFHANLAHVQAAIDSAQQAF--PTWNATPAKERAAKLDRLADLLELHMPELMALCVR 122

Query: 110 DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW 169
           +AGK    A + ++  A +  RYYA     + GE              E  GV   I PW
Sbjct: 123 EAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLGE-----------FSVESRGVFVCISPW 170

Query: 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA 229
           NFP  +F  ++S ALAAG T+I KPAEQT LIA     L + AG P G + ++PG G   
Sbjct: 171 NFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADV 230

Query: 230 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFDDVDVNTA 287
           GAA+ S   I  V+FTGST+V + + Q  A     PV L  E GG++ ++    VD    
Sbjct: 231 GAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMI----VDSTAL 286

Query: 288 ADMALLGILF----NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
            +  +  +L     + G+ C A   + VQE + D     +    +   VG P       G
Sbjct: 287 PEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVG 346

Query: 344 P 344
           P
Sbjct: 347 P 347

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  137 bits (347), Expect = 7e-37
 Identities = 88/282 (31%), Positives = 134/282 (47%), Gaps = 23/282 (8%)

Query: 59  EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHS 116
           +++D      R  F  G         R   + +    ++++ E  A++EAL  D G+   
Sbjct: 5   DEIDSIHSRLRATFRSGK--TKDLEYRLWQLKQLYWAVKDNEE--AIVEALKKDLGRPPF 60

Query: 117 WAKMGDIPGAANTLRYYAGAADK-IHGEVLKMSRALQGYTL------REPIGVVGHIIPW 169
              + ++ G  N + +      K    E  K+      +        +EP+GVV  I PW
Sbjct: 61  ETLLTEVSGVKNDILHMLKNLKKWAKDE--KVKDGPLAFMFGKPRIRKEPLGVVLIIGPW 118

Query: 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA 229
           N+P  +    +  A+AAGCT+++KP+E TP  A   A L     +      VV G  P  
Sbjct: 119 NYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP-KYLDPDAFQVVQGGVPET 177

Query: 230 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD 289
            A +    D  K+ +TGS  VGR + +AAA  +L PV+LELGGKSP+++  + D+  AA 
Sbjct: 178 TALLEQKFD--KIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAK 234

Query: 290 MALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
             L G   N G+ICVA   V V   +YDEF    VE+ K  +
Sbjct: 235 RILWGKFGNAGQICVAPDYVLVDPSVYDEF----VEELKKVL 272

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  134 bits (339), Expect = 8e-36
 Identities = 84/281 (29%), Positives = 114/281 (40%), Gaps = 56/281 (19%)

Query: 77  WPRFSGAERRGIMLKFADLIEEH---------------------AEVLAVLEALD--AGK 113
               + AER   + +    I                         E+L VL  ++     
Sbjct: 14  LRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKH 73

Query: 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173
           L  W K    P    T     G   KI                 EP GV   I PWN+P 
Sbjct: 74  LKKWMK----PKRVRTPLLLFGTKSKIR---------------YEPKGVCLIISPWNYPF 114

Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 233
            + F  +  A+AAG T I+KP+E TP  +   A + + A   D V  V  G      A +
Sbjct: 115 NLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV-AVFEG-----DAEV 168

Query: 234 ASH---MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290
           A     +  D + FTGS  VG+ VM AAA  +L  V+LELGGKSP ++ +  D+  AA  
Sbjct: 169 AQALLELPFDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKK 227

Query: 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
              G   N G+ C+A   V+V E + D F    VE  KA +
Sbjct: 228 IAWGKFLNAGQTCIAPDYVFVHESVKDAF----VEHLKAEI 264

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 2e-34
 Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 15/323 (4%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           K + +GE+  S SGK+    +P T +   ++    +E+V+ A+++A+ A     W +   
Sbjct: 17  KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA--QKAWAKTPL 74

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
            +R  ++ K A +++EH   +A     +  K    A   ++  + + + Y A    +I G
Sbjct: 75  WKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILG 133

Query: 143 E-VLKMSRALQG-----YTL--REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
           E    +S +  G     Y L  + P+GVV  I P+N+P  +   K++PAL AG  +++KP
Sbjct: 134 EGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKP 193

Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
             Q  + AL+  H   LAG P G+++ V G G   G  +  H  ++ +SFTG  D G  +
Sbjct: 194 PTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI 252

Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
            + A    + P+ +ELGGK   ++ +D D++ AA   + G     G+ C A   V V E 
Sbjct: 253 SKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMES 309

Query: 315 IYDEFEKKLVEKAKAWVVGDPFD 337
           + D   +K+  K     VG P D
Sbjct: 310 VADALVEKVNAKVAKLTVGPPED 332

Length = 496

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  129 bits (327), Expect = 5e-34
 Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 26/196 (13%)

Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LI 201
            Y   EP GVV  I PWN+P   F + ++P   A+AAG T ++KP+E TP        +I
Sbjct: 94  SYIYYEPYGVVLIIAPWNYP---FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
              F          +  + VV G        +    D   + FTGS  VG+ VM+AAA  
Sbjct: 151 EETF---------DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK- 198

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
           +L PV+LELGGKSP ++ +D ++  AA   + G   N G+ CVA   V V E + ++F K
Sbjct: 199 HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK 258

Query: 322 KLVEKAKAWVVGDPFD 337
           +L E+ K +   DP +
Sbjct: 259 ELKEEIKKFYGEDPLE 274

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  125 bits (315), Expect = 2e-31
 Identities = 82/212 (38%), Positives = 115/212 (54%), Gaps = 20/212 (9%)

Query: 43  DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE 101
           DPR  + +  + E    +V+ A+++A  A    P W     AER  I+ + ADL+E   +
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722

Query: 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKMSRALQGYTLREPI 160
            L  L   +AGK  S A + ++  A + LRYYAG   D    +           T R P+
Sbjct: 723 TLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDFDND-----------THR-PL 769

Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           G V  I PWNFP  +F  +V+ ALAAG +++ KPAEQTPLIA     +   AGVP GV+ 
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829

Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           ++PG G T GAA+ +   +  V FTGST+V R
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVAR 861

Length = 1318

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  120 bits (304), Expect = 1e-30
 Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 4/183 (2%)

Query: 153 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 212
            Y + EP+GVV  I  WN+P  +  + ++ A+AAG T+++KP+E +P  +   A L    
Sbjct: 103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLL-TK 161

Query: 213 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
            +    + V+ G G      +      D + FTGS  VG+ VMQAAA  NL P +LELGG
Sbjct: 162 YLDPSYVRVIEG-GVEVTTELLKE-PFDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGG 218

Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
           KSP+++    ++  AA     G   N G+ CVA   V V   I D+F + L E  K +  
Sbjct: 219 KSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFG 278

Query: 333 GDP 335
            DP
Sbjct: 279 EDP 281

Length = 493

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  118 bits (296), Expect = 1e-29
 Identities = 87/309 (28%), Positives = 137/309 (44%), Gaps = 15/309 (4%)

Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100
           +++P TGE ++ +     +D++ A++ A   F    W   +   R   +      +   +
Sbjct: 11  SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68

Query: 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QGYT 155
           E +A +   + GK  + A+  ++  +AN   +YA      HG  +LK    L    Q   
Sbjct: 69  EEMAQMITREMGKPINQAR-AEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122

Query: 156 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP 215
              P+G +  I+PWNFP         P L AG   ++K A      A   A + K AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182

Query: 216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275
            GV   +          I +   I  V+ TGS   G  +  A A + LK   LELGG  P
Sbjct: 183 QGVYGWLNADNDGVSQMI-NDSRIAAVTVTGSVRAGAAI-GAQAGAALKKCVLELGGSDP 240

Query: 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
            ++ +D D+  A   A+ G   N G++C A+ R  ++EGI   F ++ V  A A  +GDP
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP 300

Query: 336 FDPAVRQGP 344
            D     GP
Sbjct: 301 RDEENALGP 309

Length = 462

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  114 bits (286), Expect = 3e-28
 Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 20/329 (6%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           ++ GE+    +G    +++P   + IA + E   ED +  ++A  +A     W +    +
Sbjct: 24  YVGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPK 79

Query: 85  RRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+ +  D +    + L  L +L+ GK+ +   +G++    +   +  G + +++G +
Sbjct: 80  RGEIVRQIGDALRAKLDYLGRLVSLEMGKILA-EGIGEVQEIIDMCDFAVGLSRQLNGSI 138

Query: 145 LKMSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           +   R    + + E   P+G+VG I  +NFP  +       AL  G  ++ K A  TPLI
Sbjct: 139 IPSERP--NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196

Query: 202 ALYFAHLAKLAGV------PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
            +    L  +A V      P  +     G G   G AIA    I  VSFTGS+ VG  ++
Sbjct: 197 TIAMTKL--VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVG-LMV 252

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           Q    +      LEL G + +++ DD D+  A    L   +   G+ C    R+ + E I
Sbjct: 253 QQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESI 312

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           YD+  ++L+   K   +GDP +     GP
Sbjct: 313 YDDVLEQLLTVYKQVKIGDPLEKGTLLGP 341

Length = 508

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  109 bits (274), Expect = 1e-26
 Identities = 88/293 (30%), Positives = 138/293 (47%), Gaps = 44/293 (15%)

Query: 64  AVKAARQAFDHGPWPRFSGAERRGIMLK-FADLIEEHAEVLAVLEAL--DAGKLHSWAKM 120
           AV+ AR+AF  G   +    E R   L+    ++EE+ +   ++EAL  D  K    A +
Sbjct: 3   AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENED--EIVEALAKDLRKPKFEAVL 57

Query: 121 GDIPGAANTLRYYAGAADKIH--GEVLKMSRALQG-----YTLREPIGVVGHIIPWNFPT 173
            +I    N ++Y   A   +    +   + + L       Y  +EP+GVV  I  WN+P 
Sbjct: 58  SEILLVKNEIKY---AISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPL 114

Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTP----LIA-LYFAHLAK------LAGVPDGVLNVV 222
            +  + +  A+AAG  +++KP+E +P    L+A L   +L K      L GV +    + 
Sbjct: 115 QLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLK 174

Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV 282
             F              D + +TGST VG+ VMQAAA  +L PV+LELGGKSP  +    
Sbjct: 175 QRF--------------DYIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSC 219

Query: 283 DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
           D++ AA     G   N G+ C+A   V     + ++F + L +  K +   DP
Sbjct: 220 DIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP 272

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  106 bits (266), Expect = 1e-25
 Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 19/177 (10%)

Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLIALYFAHLAKLAG- 213
           EP+GVV  I  WNFP   F + + P   A+AAG  +++KP+E  P  +   A LAKL   
Sbjct: 100 EPLGVVLVISAWNFP---FLLSLEPVIGAIAAGNAVVLKPSELAPATS---ALLAKLIPE 153

Query: 214 -VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
            +    + V+ G G     A+      DK+ FTGS  VGR +M AAA  +L PV+LELGG
Sbjct: 154 YLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM-AAAAKHLTPVTLELGG 210

Query: 273 KSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328
           K P+++   VD+  A      G    N G+ C+A   V V+E     F   L++  K
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEE----SFAPTLIDALK 263

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score =  104 bits (262), Expect = 8e-25
 Identities = 89/354 (25%), Positives = 143/354 (40%), Gaps = 76/354 (21%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L I G+ V +  G T + + P      +A     D   V+ A++AA +A     W R   
Sbjct: 35  LVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEA--RKEWARMPF 90

Query: 83  AERRGIMLKFADLIEE-------------------HAEVLAVLEALD--------AGKLH 115
            +R  I LK ADL+                      AE+ A  E +D        A +L+
Sbjct: 91  EDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELY 150

Query: 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF---- 171
           +   +    G  N L Y                R L+G+        V  + P+NF    
Sbjct: 151 AQQPLSSPAGVWNRLEY----------------RPLEGF--------VYAVSPFNFTAIG 186

Query: 172 ---PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 228
                        PAL  G  ++ KP++   L       + + AG+P GV+N VPG GP 
Sbjct: 187 GNLAGA-------PALM-GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPV 238

Query: 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPLLIFDDVD 283
            G  + +   +  + FTGST   + + +    +         +  E GGK+  L+    D
Sbjct: 239 VGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSAD 298

Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
           V++     + G    +G+ C A+SR YV E ++ E +++L+E+ K   +GDP D
Sbjct: 299 VDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDD 352

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score = 97.3 bits (242), Expect = 2e-22
 Identities = 63/268 (23%), Positives = 100/268 (37%), Gaps = 24/268 (8%)

Query: 73  DHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132
                 R +  +R   + +    +   +  +A    L  GK   W    +I G    LR 
Sbjct: 11  STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGK--GWMFAENICGDQVQLRA 68

Query: 133 YA--GAADKIH---GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
            A    + +I    G  L      Q +  R P G V  I  +NFP  +  ++++ ALA G
Sbjct: 69  RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMG 128

Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
             +IVKP     ++      L   AG+       +         A+  H +   V FTGS
Sbjct: 129 NPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGS 188

Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDV------NTAADMALLGILFNKGE 301
           + V  ++   A  +    + LEL G +  ++  D             DM         G+
Sbjct: 189 SRVAEKLALDAKQA---RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA-----CSGQ 240

Query: 302 ICVASSRVYVQEGIYDEFEKKLVEKAKA 329
            C A S ++V E   +  +  LVEK KA
Sbjct: 241 KCTAQSMLFVPE---NWSKTPLVEKLKA 265

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 97.2 bits (242), Expect = 3e-22
 Identities = 90/323 (27%), Positives = 143/323 (44%), Gaps = 14/323 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L I GE V + SG+    + P      +A+     +E  + AV+AA  A     W     
Sbjct: 34  LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90

Query: 83  AERRGIMLKFADLI--EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
            +R  I LK ADL+     AE+LA    L   K    A++  +    +  R+ A  A ++
Sbjct: 91  YDRAAIFLKAADLLSGPYRAEILAAT-MLGQSKTVYQAEIDAVAELIDFFRFNAKYAREL 149

Query: 141 HGEVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
           + +    +      T   P+ G V  I P+NF      +  +PAL  G T+I KP++   
Sbjct: 150 YEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAM 208

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           L       + + AG+P GV+N VPG GP     + +  D+  + FTGST   + + +  A
Sbjct: 209 LSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVA 268

Query: 260 TS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
            +     N   +  E GGK   ++    DV       + G    +G+ C A SR+YV   
Sbjct: 269 QNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHS 328

Query: 315 IYDEFEKKLVEKAKAWVVGDPFD 337
           ++  F+ +L+ +     VGDP D
Sbjct: 329 LWPRFKGRLLAELSRVKVGDPDD 351

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score = 95.2 bits (237), Expect = 1e-21
 Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 46/350 (13%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-----GPWPR 79
           ++ G +    SG      DP TGE + R+       +DLA      AF       G   R
Sbjct: 8   YVAGRWQAG-SGAGTPLFDPVTGEELVRV---SATGLDLA-----AAFAFAREQGGAALR 58

Query: 80  -FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
             + A+R  ++     +++ + +    +   ++G   + + + DI G   TL YYA    
Sbjct: 59  ALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGA 117

Query: 139 KI-------HGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
            +        GE +++ +  A QG  +  P  GV   I  +NFP    + K +PAL AG 
Sbjct: 118 ALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGV 177

Query: 189 TMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMD-IDKVSFTG 246
            +IVKPA  T  +          AG+ P G L+VV G    + A +  H+   D VSFTG
Sbjct: 178 PVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTG 233

Query: 247 STDVGRQ------VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---- 296
           S +          V+Q +   N++  SL     S LL  D    + A D+ +  ++    
Sbjct: 234 SAETAAVLRSHPAVVQRSVRVNVEADSL----NSALLGPDAAPGSEAFDLFVKEVVREMT 289

Query: 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              G+ C A  R++V E +YD   + L  +     VG+P +  VR GP V
Sbjct: 290 VKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLV 339

Length = 521

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 94.8 bits (236), Expect = 2e-21
 Identities = 64/180 (35%), Positives = 91/180 (50%), Gaps = 22/180 (12%)

Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP-- 215
           EP+GVV     WNFP  +    +  A+AAG  +++KP+E  P  + + A     A +P  
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA-----ANIPKY 161

Query: 216 --DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
                + V+ G GP  G  +  H   DK+ FTGS  VGR +M AAA  +L PV+LELGGK
Sbjct: 162 LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGK 218

Query: 274 SPLLIFDDVDVNTAADMALLGILFNK-----GEICVASSRVYVQEGIYDEFEKKLVEKAK 328
            P  I D +  +    +A+  I+  K     G+ C+A   V V+E     F   L+E  K
Sbjct: 219 CP-CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEE----RFAPILIELLK 273

Length = 484

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 81.2 bits (201), Expect = 6e-17
 Identities = 94/348 (27%), Positives = 136/348 (39%), Gaps = 42/348 (12%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           ++ G++    +G      D  TGE +AR++  +  D   AV  AR+    GP  R     
Sbjct: 4   YVAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFH 59

Query: 85  RRGIMLK-FADLIEEHAEVLAVLEALDAG-KLHSWAKMGDIPGAANTLRYYAGAADK--- 139
            R  MLK  A  + E  E L  L A     +  SW    DI G   TL  YA    +   
Sbjct: 60  ERAAMLKALAKYLMERKEDLYALSAATGATRRDSWI---DIDGGIGTLFAYASLGRRELP 116

Query: 140 -----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
                + G+V  +S+     G  +  P  GV  HI  +NFP      K +PAL AG  +I
Sbjct: 117 NAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVI 176

Query: 192 VKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTD 249
           VKPA  T  +          +G+ P+G L ++ G    +   +  H+   D V+FTGS  
Sbjct: 177 VKPATATAYLTEAVVKDIVESGLLPEGALQLICG----SVGDLLDHLGEQDVVAFTGSAA 232

Query: 250 VGRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK--------- 299
              ++       +     + E    +  ++  D              LF K         
Sbjct: 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDA----TPGTPEFD-LFVKEVAREMTVK 287

Query: 300 -GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            G+ C A  R +V E   D   + L  +    VVGDP    VR GP V
Sbjct: 288 AGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLV 335

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 9/172 (5%)

Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
           EP+GVV  I  WN+P  +    V  A++AG  +++KP+E  P  +   A L +       
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSS- 169

Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
            + VV G      A +    D  K+ +TGS+ +GR +M AAA  +L PV LELGGKSP++
Sbjct: 170 AVRVVEGAVTETTALLEQKWD--KIFYTGSSKIGRVIM-AAAAKHLTPVVLELGGKSPVV 226

Query: 278 IFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328
           +  D D+       + G    N G+ C++   +   +    E+  K+++  K
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTK----EYAPKVIDAMK 274

Length = 484

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 78.7 bits (194), Expect = 6e-16
 Identities = 90/343 (26%), Positives = 139/343 (40%), Gaps = 32/343 (9%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           +++GE+  +  G+     D  TGE +AR+   +  DV  AV  AR+    GP  R     
Sbjct: 4   YLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALTFH 59

Query: 85  RRGIMLK-FADLIEEHAEVLAVLEA-LDAGKLHSWAKMGDIPGAANTLRYYAGAADK--- 139
            R  MLK  A  + E  E L  L A   A +  +W    DI G   TL  Y+    +   
Sbjct: 60  ERARMLKALAQYLSERKEALYALAATTGATRRDNWV---DIDGGIGTLFTYSSLGRRELP 116

Query: 140 -----IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
                   E   +S+  + QG  +  P  GV   I  +NFP      K +PA  AG   +
Sbjct: 117 DANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTL 176

Query: 192 VKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTD 249
            KPA  T  +A         +G +P+G L ++ G   +AG  +  H+D  D V+FTGS  
Sbjct: 177 AKPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAG-DLLDHLDHRDVVAFTGSAA 232

Query: 250 VGRQV-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK-----GEIC 303
              ++             + E    +  ++ +D   +          +  +     G+ C
Sbjct: 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKC 292

Query: 304 VASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            A  RV V + + +   K L  +    V+GDP +  V  GP V
Sbjct: 293 TAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLV 335

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 76.8 bits (190), Expect = 1e-15
 Identities = 86/312 (27%), Positives = 116/312 (37%), Gaps = 41/312 (13%)

Query: 61  VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL---AVLE-ALDAGKLHS 116
           VD A  AA  AF+   +   S A R   +   AD IE   + L   A  E  L   +L  
Sbjct: 1   VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARL-- 56

Query: 117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYT------LRE---PIGVVGH 165
               G++      LR +A    +  G  L      A           LR    P+G V  
Sbjct: 57  ---QGELGRTTGQLRLFADLVRE--GSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAV 111

Query: 166 IIPWNFPTTMFFMKVS-----PALAAGCTMIVK--PA--EQTPLIALYFAHLAKLAGVPD 216
               NFP       V+      ALAAGC ++VK  PA    + L+A       +  G+P 
Sbjct: 112 FGASNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPA 168

Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL-KPVSLELGGKSP 275
           GV +++ G G   G A+  H  I  V FTGS   GR +  AAA      P   ELG  +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228

Query: 276 LLIFDDVDVNTAADMA--LLG-ILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWV 331
           + I           +A   +G +    G+ C     V V  G   D F   L E   A  
Sbjct: 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAP 288

Query: 332 VGDPFDPAVRQG 343
                 P + + 
Sbjct: 289 AQTMLTPGIAEA 300

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 66.4 bits (163), Expect = 5e-12
 Identities = 106/377 (28%), Positives = 142/377 (37%), Gaps = 100/377 (26%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-----GPWPR 79
           ++ G +     G+     D  TGE +AR+     E +D A      A  +     GP  R
Sbjct: 8   YVAGRWQTG-QGEGRPLHDAVTGEPVARV---SSEGLDFA-----AALAYAREVGGPALR 58

Query: 80  FSGAERRGIMLK-FADLIEEHAEVLAVLEALD-AGKLHSWAKMGDIPGAANTLRYYAGAA 137
                 R  MLK  A  + E  E L  L A   A +  SW    DI G   TL  YA   
Sbjct: 59  ALTFHERAAMLKALAKYLLERKEELYALSAQTGATRRDSWI---DIEGGIGTLFTYASKG 115

Query: 138 ------DKIH--GEVLKMSRALQG-------YTLREPIGVVGHIIPWNFPTTMFFMKVSP 182
                 D +   GEV  +S+   G        T  E  GV  HI  +NFP      K++P
Sbjct: 116 RRELPNDTVLVEGEVEPLSK--GGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAP 171

Query: 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA--------GVPDGVLNVVPGFGPTAGAAIA 234
           A  AG   IVKPA  T       A+L +           +P+G L ++ G   +AG  + 
Sbjct: 172 AFLAGVPAIVKPATAT-------AYLTEAVVRLIVESGLLPEGALQLICG---SAG-DLL 220

Query: 235 SHMDI-DKVSFTGSTDVGRQVMQAAATSN-LKPVSLELGGKSPLLIFDDVDVNTAAD--- 289
            H+D  D V+FTGS          AAT+  L+          P ++ + V     AD   
Sbjct: 221 DHLDGQDVVTFTGS----------AATAQKLR--------AHPNVVANSVPFTAEADSLN 262

Query: 290 MALLGI----------LFNK----------GEICVASSRVYVQEGIYDEFEKKLVEKAKA 329
            A+LG           LF K          G+ C A  R  V   + D   + L  +   
Sbjct: 263 AAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAK 322

Query: 330 WVVGDPFDPAVRQGPQV 346
            VVGDP    VR G   
Sbjct: 323 VVVGDPRLEGVRMGALA 339

Length = 675

>gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 60/289 (20%), Positives = 93/289 (32%), Gaps = 35/289 (12%)

Query: 80  FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS------WAKMGDIPGAAN----T 129
               +R  I+   A+ + +  + LA     + G           A MG           T
Sbjct: 13  NHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDT 72

Query: 130 LRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
            R    +   I   +L  +   + Y    PIGV  HI+P   P +     +   +A    
Sbjct: 73  ERGITASVGHIQDVLLPDN--GETYVRAFPIGVTMHILPSTNPLSGITSALR-GIATRNQ 129

Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFT 245
            I +P    P        L   A        ++  + P     +A    SH  ID +  T
Sbjct: 130 CIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVAT 188

Query: 246 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 305
           G  D    V  A   S   PV     G SP+++ +  D   A+        F+    C +
Sbjct: 189 GGRDA---VDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACAS 244

Query: 306 SSRVYVQEGIYD----EFEKKLVE---------KAKAWVVGDPFDPAVR 341
              +YV + + D    EF+ KLV          K  +      FD    
Sbjct: 245 EQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEAL 293

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 50.7 bits (121), Expect = 5e-07
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 9/176 (5%)

Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAK 210
            + EPIGVV  I P   PT+    K   +L    ++I  P     + T   A      A 
Sbjct: 91  IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150

Query: 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 270
            AG P+ ++  +          +     I  +  TG    G  V++AA +S  KP     
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAYSSG-KPAIGVG 205

Query: 271 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326
            G +P++I +  D+  A    +    F+ G IC +   V V + +YDE  +    +
Sbjct: 206 AGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQ 261

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 35/290 (12%)

Query: 59  EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
             VD AV AA+ A     + + + A+R  I+    + +  +AE LA +   + G      
Sbjct: 4   ATVDDAVAAAKAAQ--KQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETG------ 55

Query: 119 KMGDIPG--AANTLRYYAGAADKIHG-EVLKMSRALQG---YTLRE--PIGVVGHIIPWN 170
            MG +    A N L     AA+K  G E L  + A  G    TL E  P GV+G I P  
Sbjct: 56  -MGRVEDKIAKNHL-----AAEKTPGTEDLTTT-AWSGDNGLTLVEYAPFGVIGAITPST 108

Query: 171 FPT-TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGF 225
            PT T+    +S  LAAG  ++  P      ++ Y   L       AG PD ++  V   
Sbjct: 109 NPTETIINNSIS-MLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEP 167

Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
                  + +H DI+ +  TG   V +  + +      K       G  P+++ +  D+ 
Sbjct: 168 TIETTNELMAHPDINLLVVTGGPAVVKAALSSG-----KKAIGAGAGNPPVVVDETADIE 222

Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
            AA   + G  F+    C+A   V   + + D     + ++  A+V+ D 
Sbjct: 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAM-QRNGAYVLNDE 271

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 13/235 (5%)

Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
            + G++  +        +DP  G+    + + D+++++  V + RQ    G        E
Sbjct: 2   LVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59

Query: 85  RR----GIMLKFADLIE--EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
           R      +  + A  +   E  +  A L    A K  + A  G++      L  +AG   
Sbjct: 60  RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQV 118

Query: 139 KIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
           +       +    QG      R P G V  I P+NFP  +  +++  AL  G   ++K  
Sbjct: 119 RFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
            +  ++   F  L  L G+P   ++++   GPT    I    +     FTGS+ V
Sbjct: 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMN-KILLEANPRMTLFTGSSKV 232

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

 Score = 44.4 bits (106), Expect = 5e-05
 Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 36/215 (16%)

Query: 158 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIALYFAH-LAKL 211
           EP+GV+  +IP   P  T +F  K   AL     +I  P   A++  + A       A  
Sbjct: 94  EPVGVIAALIPSTNPTSTAIF--KALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVA 151

Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
           AG P+G++  +          +  H D+D +  TG        M  AA S+ KP    +G
Sbjct: 152 AGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGG-----PGMVKAAYSSGKPA---IG 203

Query: 272 ---GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF--------- 319
              G  P  I +  D+  A    +L   F+ G IC +   V V + IYDE          
Sbjct: 204 VGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGA 263

Query: 320 ------EKKLVEKAKAWVVGDPFDP-AVRQGPQVL 347
                 EK+ +EKA  +  G   +P  V +  Q +
Sbjct: 264 YFLNEEEKEKLEKA-LFDDGGTLNPDIVGKSAQKI 297

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436

>gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 81/289 (28%), Positives = 123/289 (42%), Gaps = 39/289 (13%)

Query: 59  EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
             VD AV AA+ A     + + S A R+ I+    + +  HAE LA L   + G      
Sbjct: 36  ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELAVEETG------ 87

Query: 119 KMGDIPG--AANTLRYYAGAADKIHG-EVLKMSRAL---QGYTLRE--PIGVVGHIIPWN 170
            MG +    A N       AA+K  G E L    AL    G TL E  P GV+G + P  
Sbjct: 88  -MGRVEDKIAKNVA-----AAEKTPGVEDLTTE-ALTGDNGLTLIEYAPFGVIGAVTPST 140

Query: 171 FPT-TMFFMKVSPALAAGCTMIVKP---AEQTPL--IALYFAHLAKLAGVPDGVLNVVPG 224
            PT T+    +S  LAAG +++  P   A++  L  I L    +    G P+ ++  V  
Sbjct: 141 NPTETIINNAIS-MLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGG-PENLVVTVAE 198

Query: 225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD-VD 283
                   +  H  I  +  TG   V +  M+    S  K +    G  +P ++ D+  D
Sbjct: 199 PTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIG--AGAGNPPVVVDETAD 252

Query: 284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
           +  AA   + G  F+    C+A   V V + + DE   +L+EK  A ++
Sbjct: 253 IEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADEL-MRLMEKNGAVLL 300

Length = 465

>gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating)

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 13/173 (7%)

Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAKLAG 213
            P+GVV  +IP   PT+    K   ++ A   ++  P     +            A+ AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162

Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
            P+G +  +          +  + D   +  TG      + M  AA S+  P      G 
Sbjct: 163 APEGAIGCITVPTIEGTNELMKNKDTSLILATGG-----EAMVKAAYSSGTPAIGVGPGN 217

Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 322
            P  I    +V  A    +    F+ G IC +   + V+    + + +E +K+
Sbjct: 218 GPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQ 270

Length = 488

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
KOG2451	503	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2450	501	consensus Aldehyde dehydrogenase [Energy productio	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
KOG2455	561	consensus Delta-1-pyrroline-5-carboxylate dehydrog	100.0
KOG2454	583	consensus Betaine aldehyde dehydrogenase [Energy p	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
KOG2452	881	consensus Formyltetrahydrofolate dehydrogenase [Nu	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
KOG2453	507	consensus Aldehyde dehydrogenase [Energy productio	100.0
KOG2456	477	consensus Aldehyde dehydrogenase [Energy productio	100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	100.0
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.93
KOG4165	433	consensus Gamma-glutamyl phosphate reductase [Amin	99.82
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.71
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.75
PRK11809	1318	putA trifunctional transcriptional regulator/proli	96.88
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	96.71
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	92.06
COG0141	425	HisD Histidinol dehydrogenase [Amino acid transpor	88.25
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	88.14
PRK13769	368	histidinol dehydrogenase; Provisional	85.17

>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=5.9e-79  Score=547.21  Aligned_cols=342  Identities=38%  Similarity=0.635  Sum_probs=319.4

Q ss_pred             CCCCCCcccccccCcccc--ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCC
Q 018922            3 GSLSNGSCKSLFKMPEIK--FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF   80 (349)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~--~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~   80 (349)
                      .+..+-+.++-+.+++..  ....||+|+|+++.++++|++.||++||+|+.++.++.+|.++|+.+|.+||.  .|+.+
T Consensus         3 ~~s~~~r~~~~l~~~~~~~~~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~   80 (503)
T KOG2451|consen    3 RLSQFKRSGSSLFGCRLGLFRAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNL   80 (503)
T ss_pred             ccccccccCCccccccccccchhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhC
Confidence            333344334444444433  45789999999988889999999999999999999999999999999999999  89999


Q ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeec
Q 018922           81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREP  159 (349)
Q Consensus        81 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P  159 (349)
                      +..+|.++|+++.++|.+|.|+|++++++|.|||+.++. +|+.-+..+++||+.+++++.++..+.. ......+.++|
T Consensus        81 takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQP  159 (503)
T KOG2451|consen   81 TAKERSALLRKWYELIMENKDDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQP  159 (503)
T ss_pred             CHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEecc
Confidence            999999999999999999999999999999999999998 7999999999999999999999887643 45567889999


Q ss_pred             ceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC---CchhHHHHHHcC
Q 018922          160 IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG---FGPTAGAAIASH  236 (349)
Q Consensus       160 ~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g---~~~~~~~~l~~~  236 (349)
                      +||+++|+|||||...+.++..+||++||+||+||++++|++++.++++..+||+|+|++|+|++   +..++++.|+.+
T Consensus       160 vGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lcts  239 (503)
T KOG2451|consen  160 VGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTS  239 (503)
T ss_pred             ceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999996   355899999999


Q ss_pred             CCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccH
Q 018922          237 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY  316 (349)
Q Consensus       237 ~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~  316 (349)
                      |+|+.|+||||+.+|+.++++.+. ..|++.+|||||.|+||++|||+|+|++.....+|.++||.|.+.+|+|||+++|
T Consensus       240 p~VrkisFTGST~VGKiL~~qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy  318 (503)
T KOG2451|consen  240 PDVRKISFTGSTNVGKILMAQSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY  318 (503)
T ss_pred             CceeeEEeeccchHHHHHHHhhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH
Confidence            999999999999999999999987 8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       317 ~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+|+++|.++++++++||.+|+++..|||||+
T Consensus       319 D~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne  350 (503)
T KOG2451|consen  319 DKFVSKLAEAVKKLKVGDGLDPGTTQGPLINE  350 (503)
T ss_pred             HHHHHHHHHHHHheeccCCCCCCCccCCccCH
Confidence            99999999999999999999999999999985

>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.1e-77  Score=561.65  Aligned_cols=327  Identities=60%  Similarity=0.931  Sum_probs=316.8

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      ..+||||+|+++.++++++++||+||+++++++.++.+||++++++|++||+.+.|++++..+|..+|++++++++++++
T Consensus        21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~  100 (501)
T KOG2450|consen   21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD  100 (501)
T ss_pred             hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence            47999999999988899999999999999999999999999999999999985569999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|+.+.+.+.|||+.+++..++..+++.++||+.+++.+.+...+.+.....+++++|+|||+.|.|||||+....|+++
T Consensus       101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla  180 (501)
T KOG2450|consen  101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA  180 (501)
T ss_pred             HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence            99999999999999999978999999999999999988877777777778889999999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      |||++||+||+||++++|+|++.+++++.++|+|+||+|+|+|.|.+.+.+|.+|++|+.|+||||+.+|+.|++.++..
T Consensus       181 PALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~  260 (501)
T KOG2450|consen  181 PALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAES  260 (501)
T ss_pred             hHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc-ccccCCCCCCC
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPAV  340 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~-l~~g~p~~~~~  340 (349)
                      ++|++.||+|||+|.||++|||+|.|++.+.++.|+|+||.|++.+|+|||+++||+|+++++++.++ +++|||+++++
T Consensus       261 n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~  340 (501)
T KOG2450|consen  261 NLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGT  340 (501)
T ss_pred             CCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999966 99999999999


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      .+||.+|+
T Consensus       341 ~qG~~i~~  348 (501)
T KOG2450|consen  341 EQGPQISK  348 (501)
T ss_pred             ccccccCH
Confidence            99999985

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=5.4e-75  Score=572.24  Aligned_cols=346  Identities=82%  Similarity=1.241  Sum_probs=321.8

Q ss_pred             CCCCCCcccccccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCH
Q 018922            3 GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG   82 (349)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~   82 (349)
                      +|-++-...+..+++.+..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++.|+.++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~   81 (501)
T PLN02766          2 GSNGNCGGASGVKVPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSG   81 (501)
T ss_pred             CCCCCCCccccccCCCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCH
Confidence            45566677788899999999999999999876678899999999999999999999999999999999997445999999


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeeccee
Q 018922           83 AERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGV  162 (349)
Q Consensus        83 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  162 (349)
                      ++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.++|++..+.+..++..+.......+++++|+||
T Consensus        82 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GV  161 (501)
T PLN02766         82 FERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGV  161 (501)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceE
Confidence            99999999999999999999999999999999998875699999999999999877766654332333446788999999


Q ss_pred             EEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEE
Q 018922          163 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV  242 (349)
Q Consensus       163 v~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v  242 (349)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+++.|
T Consensus       162 V~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V  241 (501)
T PLN02766        162 VGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKV  241 (501)
T ss_pred             EEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEE
Confidence            99999999999999999999999999999999999999999999999999999999999999777899999999999999


Q ss_pred             EEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHH
Q 018922          243 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK  322 (349)
Q Consensus       243 ~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~  322 (349)
                      .||||+.+|+.|++.++..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus       242 ~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~  321 (501)
T PLN02766        242 SFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKK  321 (501)
T ss_pred             EEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHH
Confidence            99999999999999988437999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccCCCCCCCcccccCCC
Q 018922          323 LVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       323 l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |.++++++++|+|+++++++|||+++
T Consensus       322 l~~~~~~l~~G~p~~~~~~~Gpli~~  347 (501)
T PLN02766        322 LVEKAKDWVVGDPFDPRARQGPQVDK  347 (501)
T ss_pred             HHHHHHhccCCCCCCCCCCCCCCCCH
Confidence            99999999999999999999999984

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=4.1e-75  Score=570.11  Aligned_cols=331  Identities=37%  Similarity=0.667  Sum_probs=309.1

Q ss_pred             ccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHH
Q 018922           14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA   93 (349)
Q Consensus        14 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a   93 (349)
                      +++......++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+++|..+|.++|++++
T Consensus         3 ~~~~~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a   80 (482)
T PRK11241          3 LNDSTLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWF   80 (482)
T ss_pred             CcCcccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Confidence            445555555789999999765677899999999999999999999999999999999999  899999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCcc
Q 018922           94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFP  172 (349)
Q Consensus        94 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P  172 (349)
                      +.|++++++|++++++|+|||+.+++ .|+..+++.++|++.......+...+.. .+...+++++|+|||++|+|||||
T Consensus        81 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P  159 (482)
T PRK11241         81 NLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFP  159 (482)
T ss_pred             HHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcCh
Confidence            99999999999999999999999998 6999999999999988876655443321 233457889999999999999999


Q ss_pred             HHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHH
Q 018922          173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR  252 (349)
Q Consensus       173 ~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~  252 (349)
                      +...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+
T Consensus       160 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~  239 (482)
T PRK11241        160 AAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGR  239 (482)
T ss_pred             HHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHH
Confidence            99999999999999999999999999999999999999999999999999997778899999999999999999999999


Q ss_pred             HHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       253 ~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      .|.+.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       240 ~i~~~aa~-~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~  318 (482)
T PRK11241        240 QLMEQCAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHI  318 (482)
T ss_pred             HHHHHHHh-cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCC
Confidence            99999988 89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCC
Q 018922          333 GDPFDPAVRQGPQVLI  348 (349)
Q Consensus       333 g~p~~~~~~~Gpl~~~  348 (349)
                      |+|+++++++|||+++
T Consensus       319 G~p~~~~~~~Gpli~~  334 (482)
T PRK11241        319 GDGLEKGVTIGPLIDE  334 (482)
T ss_pred             CCCCCCCCCcCCCCCH
Confidence            9999999999999985

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=4.5e-75  Score=565.82  Aligned_cols=320  Identities=51%  Similarity=0.836  Sum_probs=303.5

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ++||||+|+....  +++++||+||+++++++.++.+|+++|+++|+.||+  .|++++..+|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e   77 (472)
T COG1012           2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE   77 (472)
T ss_pred             CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence            5799999998644  899999999999999999999999999999999998  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      |++++++|+|||+.+++ .|+..+++.++|+++..+++.+...+.......+++++|+|||++|+|||||++..+++++|
T Consensus        78 la~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap  156 (472)
T COG1012          78 LAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP  156 (472)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence            99999999999999998 57999999999999999877776544333567789999999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  262 (349)
                      ||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+++|+.|++.++. +
T Consensus       157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~  235 (472)
T COG1012         157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N  235 (472)
T ss_pred             HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence            999999999999999999999999999999999999999999777799999999999999999999999999999997 9


Q ss_pred             CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcc
Q 018922          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ  342 (349)
Q Consensus       263 ~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~  342 (349)
                      +||+++|||||||+||++|||+|.|++.++.++|.|+||.|++.+|+|||+++||+|+++|.++-+++++|||+|+.+++
T Consensus       236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~~~~l~~Gd~~d~~t~~  315 (472)
T COG1012         236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDL  315 (472)
T ss_pred             CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHHHhcCCCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999993349999999999999


Q ss_pred             cccCCC
Q 018922          343 GPQVLI  348 (349)
Q Consensus       343 Gpl~~~  348 (349)
                      ||||++
T Consensus       316 Gpli~~  321 (472)
T COG1012         316 GPLISE  321 (472)
T ss_pred             CCCCCH
Confidence            999985

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=8e-74  Score=566.70  Aligned_cols=323  Identities=33%  Similarity=0.478  Sum_probs=303.5

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      ...++||||+|+.+.+++.++++||+||+++++++.++.+|+++|+++|++||+  .|+.+|..+|.++|++++++|+++
T Consensus       112 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L~~~  189 (604)
T PLN02419        112 PRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELIRKN  189 (604)
T ss_pred             cccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence            356789999999876667899999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  178 (349)
                      +++|++++++|+|||+.+++ .|+..+++.++|+++.+....++..+.. .+...+++++|+|||++|+|||||+...++
T Consensus       190 ~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~  268 (604)
T PLN02419        190 MDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLW  268 (604)
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHH
Confidence            99999999999999999998 6999999999999998877665443321 233467889999999999999999999999


Q ss_pred             HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (349)
Q Consensus       179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~  258 (349)
                      ++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.++.|+.|++|+.|+||||+++|+.|++.+
T Consensus       269 ~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~A  347 (604)
T PLN02419        269 MFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARA  347 (604)
T ss_pred             HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999954 6789999999999999999999999999998


Q ss_pred             hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                      +. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|.++++++++|+|+|+
T Consensus       348 a~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~  425 (604)
T PLN02419        348 AA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEP  425 (604)
T ss_pred             hc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCC
Confidence            87 89999999999999999999999999999999999999999999999999999 99999999999999999999999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      +++||||+++
T Consensus       426 ~t~~GPlis~  435 (604)
T PLN02419        426 DADLGPVISK  435 (604)
T ss_pred             CCCccCCCCH
Confidence            9999999984

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=5.7e-73  Score=560.31  Aligned_cols=328  Identities=57%  Similarity=0.934  Sum_probs=306.9

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      .+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+++.|++++.++|.++|+++++.|++++
T Consensus        57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  136 (538)
T PLN02466         57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN  136 (538)
T ss_pred             cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            44689999999876678999999999999999999999999999999999997445999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      ++|++++++|+|||+.+++..|+..+++.++||+.+..+..+...+.......+++++|+|||++|+|||||+...++++
T Consensus       137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i  216 (538)
T PLN02466        137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV  216 (538)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence            99999999999999999865699999999999998887776654443333345788999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.++++.|+.||+++.|.||||+++|+.|++.++.
T Consensus       217 ~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~  296 (538)
T PLN02466        217 GPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAK  296 (538)
T ss_pred             hHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999999884


Q ss_pred             CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~  340 (349)
                      .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++.++++|+|+++++
T Consensus       297 ~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~  376 (538)
T PLN02466        297 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGV  376 (538)
T ss_pred             cCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      ++|||+++
T Consensus       377 ~~Gpli~~  384 (538)
T PLN02466        377 EQGPQIDS  384 (538)
T ss_pred             CCccCCCH
Confidence            99999974

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=2.2e-72  Score=551.79  Aligned_cols=327  Identities=46%  Similarity=0.810  Sum_probs=305.2

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.+.|+++|..+|.++|+++++.|+++++
T Consensus         6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~   85 (486)
T cd07140           6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE   85 (486)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            46899999998766788999999999999999999999999999999999973359999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc----CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      +|++++++|+|||+.++...|+..+++.++|++.+.+...+...+..    .....+++++|+|||++|+|||||+...+
T Consensus        86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~  165 (486)
T cd07140          86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA  165 (486)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence            99999999999999998656999999999999988877665543321    12235788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~  245 (486)
T cd07140         166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS  245 (486)
T ss_pred             HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus       246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~  325 (486)
T cd07140         246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD  325 (486)
T ss_pred             HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence            88547899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       326 ~~~~~Gpli~~  336 (486)
T cd07140         326 RSTDHGPQNHK  336 (486)
T ss_pred             CCCcCCCCcCH
Confidence            99999999974

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.9e-72  Score=554.12  Aligned_cols=331  Identities=41%  Similarity=0.693  Sum_probs=308.3

Q ss_pred             ccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHH
Q 018922           14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA   93 (349)
Q Consensus        14 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a   93 (349)
                      ++.-...+.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  .|+++|..+|.++|++++
T Consensus        17 ~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a   94 (498)
T PLN02278         17 LRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWY   94 (498)
T ss_pred             hhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Confidence            334434456799999998765678899999999999999999999999999999999999  899999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCcc
Q 018922           94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFP  172 (349)
Q Consensus        94 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P  172 (349)
                      +.|++++++|++++++|+|||..++. .|+..+++.+++++.......+...+.. .+...+++++|+|||++|+|||||
T Consensus        95 ~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P  173 (498)
T PLN02278         95 DLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFP  173 (498)
T ss_pred             HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccH
Confidence            99999999999999999999999988 6999999999999998877665443322 233456789999999999999999


Q ss_pred             HHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHH
Q 018922          173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR  252 (349)
Q Consensus       173 ~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~  252 (349)
                      +...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+
T Consensus       174 ~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~  253 (498)
T PLN02278        174 LAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGK  253 (498)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHH
Confidence            99999999999999999999999999999999999999999999999999997777889999999999999999999999


Q ss_pred             HHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       253 ~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      .|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++|++|+++|.++++++++
T Consensus       254 ~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~  332 (498)
T PLN02278        254 KLMAGAAA-TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVV  332 (498)
T ss_pred             HHHHHHhh-cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            99999887 89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCC
Q 018922          333 GDPFDPAVRQGPQVLI  348 (349)
Q Consensus       333 g~p~~~~~~~Gpl~~~  348 (349)
                      |+|+++++++|||+++
T Consensus       333 G~p~~~~~~~Gpli~~  348 (498)
T PLN02278        333 GDGFEEGVTQGPLINE  348 (498)
T ss_pred             CCCCCCCCcCCCccCH
Confidence            9999999999999975

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=2.6e-72  Score=549.82  Aligned_cols=322  Identities=39%  Similarity=0.626  Sum_probs=300.9

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      +++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+  .|+++|.++|.++|++++++|+++++
T Consensus         2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   78 (472)
T TIGR03374         2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ   78 (472)
T ss_pred             CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            468999999975 467899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      +|++++++|+|||+.++...|+..+++.++|++...+.+.+...+. ..+...++.|+|+|||++|+|||||+...++++
T Consensus        79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~  158 (472)
T TIGR03374        79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL  158 (472)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence            9999999999999998864699999999999998776655432221 123345789999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|.++..+++++.+. +|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|++.++.
T Consensus       159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~  237 (472)
T TIGR03374       159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP  237 (472)
T ss_pred             HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence            99999999999999999999999999999885 99999999999777899999999999999999999999999999987


Q ss_pred             CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~  340 (349)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus       238 -~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~  316 (472)
T TIGR03374       238 -SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST  316 (472)
T ss_pred             -cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      ++|||+++
T Consensus       317 ~~Gpli~~  324 (472)
T TIGR03374       317 ELGPLSSL  324 (472)
T ss_pred             cCCCCCCH
Confidence            99999984

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=4.8e-72  Score=549.92  Aligned_cols=327  Identities=63%  Similarity=0.996  Sum_probs=305.0

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      +++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.++.++|.++|+++++.|+++++
T Consensus         4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07142           4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            46799999997666678999999999999999999999999999999999973359999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|++++++|+|||+.+++..|+..+++.+++++.+.+...+...+.......++.++|+|||++|+|||||+...+++++
T Consensus        84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~  163 (476)
T cd07142          84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVG  163 (476)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHHH
Confidence            99999999999999988656999999999999988877665544432233457889999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.++..
T Consensus       164 ~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~~  243 (476)
T cd07142         164 PALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKS  243 (476)
T ss_pred             HHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999997777899999999999999999999999999998754


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++++
T Consensus       244 ~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~  323 (476)
T cd07142         244 NLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVE  323 (476)
T ss_pred             CCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +|||+++
T Consensus       324 ~Gpli~~  330 (476)
T cd07142         324 QGPQVDK  330 (476)
T ss_pred             CCcCcCH
Confidence            9999975

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-72  Score=552.59  Aligned_cols=326  Identities=44%  Similarity=0.734  Sum_probs=306.4

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      ...+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|++++++|++
T Consensus         4 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~   81 (488)
T PRK13252          4 QPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRE   81 (488)
T ss_pred             CccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            4566889999999766678899999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  178 (349)
                      ++++|++++++|+|||+.+++..|+..+++.++++++..+.+.++..+...+...+++++|+|||++|+|||||+...++
T Consensus        82 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~  161 (488)
T PRK13252         82 RNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACW  161 (488)
T ss_pred             hHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence            99999999999999999998756999999999999998877665543332334457889999999999999999999999


Q ss_pred             HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (349)
Q Consensus       179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~  258 (349)
                      ++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++. +++.|+.||+++.|+||||+++|+.|.+.+
T Consensus       162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a  240 (488)
T PRK13252        162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAA  240 (488)
T ss_pred             HHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999665 899999999999999999999999999998


Q ss_pred             hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                      +. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++
T Consensus       241 a~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  319 (488)
T PRK13252        241 AA-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDP  319 (488)
T ss_pred             hh-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            88 79999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      ++++|||+++
T Consensus       320 ~~~~gpli~~  329 (488)
T PRK13252        320 ATNFGPLVSF  329 (488)
T ss_pred             CCcccccCCH
Confidence            9999999985

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=5e-72  Score=550.98  Aligned_cols=325  Identities=46%  Similarity=0.748  Sum_probs=305.4

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhc-----ccCCCCCCCHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-----DHGPWPRFSGAERRGIMLKFAD   94 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~-----~~~~w~~~~~~~R~~~L~~~a~   94 (349)
                      ...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||     +  .|+.++.++|.++|+++++
T Consensus         6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a~   83 (503)
T PLN02467          6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIAA   83 (503)
T ss_pred             CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHHH
Confidence            34578999999987667889999999999999999999999999999999999     7  8999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCcee-ec--c-CCccceEEeecceeEEEEcCCC
Q 018922           95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--S-RALQGYTLREPIGVVGHIIPWN  170 (349)
Q Consensus        95 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~P~GVv~~i~p~n  170 (349)
                      .|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+... +.  . .....+++++|+|||++|+|||
T Consensus        84 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN  162 (503)
T PLN02467         84 KITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWN  162 (503)
T ss_pred             HHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCC
Confidence            9999999999999999999999998 5999999999999998877755431 11  1 1234678899999999999999


Q ss_pred             ccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHH
Q 018922          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV  250 (349)
Q Consensus       171 ~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~  250 (349)
                      ||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+
T Consensus       163 ~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~  242 (503)
T PLN02467        163 YPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTAT  242 (503)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHH
Confidence            99999999999999999999999999999999999999999999999999999977788999999999999999999999


Q ss_pred             HHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc
Q 018922          251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       251 g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l  330 (349)
                      |+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++
T Consensus       243 g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l  321 (503)
T PLN02467        243 GRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNI  321 (503)
T ss_pred             HHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence            9999999987 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCcccccCCC
Q 018922          331 VVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       331 ~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|||+++++++|||+++
T Consensus       322 ~~g~p~~~~~~~Gpli~~  339 (503)
T PLN02467        322 KISDPLEEGCRLGPVVSE  339 (503)
T ss_pred             CCCCCCCCCCCcCCCCCH
Confidence            999999999999999975

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=5.7e-72  Score=550.21  Aligned_cols=323  Identities=25%  Similarity=0.456  Sum_probs=301.4

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      .+..++||||+|+.+  +.+++++||+|++++++++.++.+|+++|+++|++||+  .|++++..+|.++|+++++.|++
T Consensus        18 ~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~   93 (508)
T PLN02315         18 SRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRA   93 (508)
T ss_pred             ccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence            346689999999863  56799999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|+++.++.+.+...+.. .....++.++|+|||++|+|||||+...+
T Consensus        94 ~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  172 (508)
T PLN02315         94 KLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLG  172 (508)
T ss_pred             HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence            999999999999999999997 6999999999999988877665543322 22344678999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ  253 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~----l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~  253 (349)
                      +++++||++||+||+|||+.+|.++..    +.++|.++|+|+|++|+++| +.++++.|+.||+++.|.||||+++|+.
T Consensus       173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~  251 (508)
T PLN02315        173 WNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLM  251 (508)
T ss_pred             HHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence            999999999999999999999999887    67888999999999999998 7788999999999999999999999999


Q ss_pred             HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922          254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG  333 (349)
Q Consensus       254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g  333 (349)
                      |++.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       252 v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG  330 (508)
T PLN02315        252 VQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIG  330 (508)
T ss_pred             HHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence            9999887 889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCC
Q 018922          334 DPFDPAVRQGPQVLI  348 (349)
Q Consensus       334 ~p~~~~~~~Gpl~~~  348 (349)
                      +|+++++++|||+++
T Consensus       331 ~p~~~~~~~Gpli~~  345 (508)
T PLN02315        331 DPLEKGTLLGPLHTP  345 (508)
T ss_pred             CCCCCCCCCCCCcCH
Confidence            999999999999974

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=1.2e-71  Score=547.26  Aligned_cols=322  Identities=43%  Similarity=0.684  Sum_probs=300.5

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      +||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. .|++++..+|.++|+++++.|++++++|
T Consensus         2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el   80 (477)
T cd07113           2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVS-AWAKTTPAERGRILLRLADLIEQHGEEL   80 (477)
T ss_pred             CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHh-hhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence            689999998766678999999999999999999999999999999999972 3999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc------CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS------RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++++|+|||+.+++..|+..+++.+++++++.....+...+..      .....+++++|+|||++|+|||||+...+
T Consensus        81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~  160 (477)
T cd07113          81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV  160 (477)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence            999999999999998745999999999999988776655432211      12345788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++. +++.|+.||+++.|.||||+++|+.|.+.
T Consensus       161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~  239 (477)
T cd07113         161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQ  239 (477)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999766 89999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+|
T Consensus       240 aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~  318 (477)
T cd07113         240 AAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMD  318 (477)
T ss_pred             HHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            988 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       319 ~~~~~gpli~~  329 (477)
T cd07113         319 ESVMFGPLANQ  329 (477)
T ss_pred             CCCCCCCCcCH
Confidence            99999999985

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=2.2e-71  Score=545.96  Aligned_cols=333  Identities=59%  Similarity=0.927  Sum_probs=309.6

Q ss_pred             CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHH
Q 018922           16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFAD   94 (349)
Q Consensus        16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~   94 (349)
                      ++++..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+ .|+++|.++|.++|+++++
T Consensus         1 ~~~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~   80 (481)
T cd07141           1 NPEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLAD   80 (481)
T ss_pred             CcccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHH
Confidence            456777889999999987667889999999999999999999999999999999999732 5999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHH
Q 018922           95 LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTT  174 (349)
Q Consensus        95 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~  174 (349)
                      .|++++++|++++++|+|||+.++...|+..+++.+++++...++..+...+.......+++++|+|||++|+|||||+.
T Consensus        81 ~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~  160 (481)
T cd07141          81 LIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLL  160 (481)
T ss_pred             HHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHH
Confidence            99999999999999999999976654699999999999999887776654443333446788999999999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ..++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|
T Consensus       161 ~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i  240 (481)
T cd07141         161 MAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLI  240 (481)
T ss_pred             HHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999777889999999999999999999999999


Q ss_pred             HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      .+.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus       241 ~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  320 (481)
T cd07141         241 QQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN  320 (481)
T ss_pred             HHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence            99887547899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+++
T Consensus       321 p~~~~~~~gpli~~  334 (481)
T cd07141         321 PFDPKTEQGPQIDE  334 (481)
T ss_pred             CCCCCCCCcCCCCH
Confidence            99999999999984

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=1.5e-71  Score=545.17  Aligned_cols=322  Identities=48%  Similarity=0.767  Sum_probs=302.6

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (475)
T cd07117           2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL   79 (475)
T ss_pred             CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence            579999999876667899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      |++++++|+|||+.+++..|+..+++.+++++..+....++..+.......+++++|+|||++|+|||||+...++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~  159 (475)
T cd07117          80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP  159 (475)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence            99999999999999987569999999999999887666554433223334578899999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  262 (349)
                      ||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.+++ +
T Consensus       160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~  237 (475)
T cd07117         160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K  237 (475)
T ss_pred             HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence            999999999999999999999999999885 99999999999777889999999999999999999999999999887 8


Q ss_pred             CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcc
Q 018922          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ  342 (349)
Q Consensus       263 ~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~  342 (349)
                      ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++
T Consensus       238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~  317 (475)
T cd07117         238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM  317 (475)
T ss_pred             CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCC
Q 018922          343 GPQVLI  348 (349)
Q Consensus       343 Gpl~~~  348 (349)
                      |||+++
T Consensus       318 gpli~~  323 (475)
T cd07117         318 GAQVNK  323 (475)
T ss_pred             cCcCCH
Confidence            999975

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=1.5e-71  Score=546.33  Aligned_cols=322  Identities=49%  Similarity=0.769  Sum_probs=303.8

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|+++++.|++++++
T Consensus         2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (480)
T cd07559           2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL   79 (480)
T ss_pred             CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            579999999876678999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      |++++++|+|||+.++...|+..+++.++++++......+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus        80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~  159 (480)
T cd07559          80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP  159 (480)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence            99999999999999987569999999999999887766554433333445678899999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  262 (349)
                      ||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|++.++. +
T Consensus       160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~  237 (480)
T cd07559         160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N  237 (480)
T ss_pred             HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence            999999999999999999999999999996 99999999999778899999999999999999999999999999987 8


Q ss_pred             CcceEEeCCCCCceeEcCCC-----CHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          263 LKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       263 ~~~~~le~gG~~~~iV~~da-----d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++|+++|+|||||+||++||     |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++
T Consensus       238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~  317 (480)
T cd07559         238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD  317 (480)
T ss_pred             CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999     9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       318 ~~~~~gpli~~  328 (480)
T cd07559         318 PETMMGAQVSK  328 (480)
T ss_pred             CCCcCCCCcCH
Confidence            99999999985

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=5.9e-71  Score=541.83  Aligned_cols=326  Identities=56%  Similarity=0.882  Sum_probs=303.1

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCC-CCCHHHHHHHHHHHHHHHHHhH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      +++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+. .|+ .+|.++|.++|+++++.|++++
T Consensus         7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~   85 (481)
T cd07143           7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL   85 (481)
T ss_pred             cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence            47899999998766678999999999999999999999999999999999972 399 9999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      ++|++++++|+|||+.+....|+..+++.+++++.+++...+...+.......+++++|+|||++|+|||||+...++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~  165 (481)
T cd07143          86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI  165 (481)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence            99999999999999976554699999999999999887765544332233445788999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.++.
T Consensus       166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~  245 (481)
T cd07143         166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK  245 (481)
T ss_pred             HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999998875


Q ss_pred             CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~  340 (349)
                      .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus       246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  325 (481)
T cd07143         246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT  325 (481)
T ss_pred             hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      ++|||+++
T Consensus       326 ~~gpli~~  333 (481)
T cd07143         326 FQGPQVSQ  333 (481)
T ss_pred             CCCCCcCH
Confidence            99999874

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=8.5e-71  Score=541.72  Aligned_cols=321  Identities=41%  Similarity=0.710  Sum_probs=299.5

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      ++||||+|+.  ++..++++||+||+++++++.++.+|+++++++|++||+  . |+++|..+|.++|++++++|+++++
T Consensus         2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~   77 (481)
T TIGR03216         2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD   77 (481)
T ss_pred             CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            5799999986  457899999999999999999999999999999999998  7 9999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc----CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      +|++++++|+|||..++...|+..+++.++++++......+...+..    .+...+++++|+|||++|+|||||+...+
T Consensus        78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~  157 (481)
T TIGR03216        78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT  157 (481)
T ss_pred             HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence            99999999999999988645999999999999988876554433211    12345688999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~  256 (349)
                      +++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|.+. ++++.|..||+++.|+||||+.+|+.|++
T Consensus       158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~  237 (481)
T TIGR03216       158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK  237 (481)
T ss_pred             HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998654 58889999999999999999999999999


Q ss_pred             HHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       257 ~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      .+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+
T Consensus       238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~  316 (481)
T TIGR03216       238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD  316 (481)
T ss_pred             HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            9987 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      ++++++|||+++
T Consensus       317 ~~~~~~gpli~~  328 (481)
T TIGR03216       317 DPATNMGPLISA  328 (481)
T ss_pred             CCCCcCCCCCCH
Confidence            999999999974

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=5.9e-71  Score=544.05  Aligned_cols=321  Identities=45%  Similarity=0.749  Sum_probs=301.6

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  .|+.++..+|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~   79 (488)
T TIGR02299         2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE   79 (488)
T ss_pred             CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence            469999999876667899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhh-hhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD-KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      |++++++|+|||+.+++ .|+..+++.++++++... ...+...+.. ....+++++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  157 (488)
T TIGR02299        80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA  157 (488)
T ss_pred             HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence            99999999999999998 799999999999998776 3333333322 23457889999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|.+.++++.|+.||.++.|+||||+++|+.|++.++. 
T Consensus       158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~-  236 (488)
T TIGR02299       158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD-  236 (488)
T ss_pred             HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999999777888999999999999999999999999999987 


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++++++
T Consensus       237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~  316 (488)
T TIGR02299       237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE  316 (488)
T ss_pred             cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +|||+++
T Consensus       317 ~Gpli~~  323 (488)
T TIGR02299       317 VGPLIHP  323 (488)
T ss_pred             CCCCcCH
Confidence            9999974

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=7.8e-71  Score=545.04  Aligned_cols=325  Identities=27%  Similarity=0.366  Sum_probs=301.3

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE   97 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~   97 (349)
                      +..+++||||+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+  .|+++|..+|.++|++++++|+
T Consensus        29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~  105 (533)
T TIGR01236        29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLS  105 (533)
T ss_pred             CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence            466789999999975 456899999996 899999999999999999999999999  8999999999999999999999


Q ss_pred             -HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCcee-eccCCccceEEeecc-eeEEEEcCCCccHH
Q 018922           98 -EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPI-GVVGHIIPWNFPTT  174 (349)
Q Consensus        98 -~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~  174 (349)
                       +++++|++++++|+|||+.+++..++..+++.++|++.++..+.+... ....+...++.++|+ |||++|+|||||+.
T Consensus       106 ~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~  185 (533)
T TIGR01236       106 GPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAI  185 (533)
T ss_pred             hhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHH
Confidence             599999999999999999998743499999999999988877655433 112234567889999 99999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ...+++++|| +||+||+|||+++|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|
T Consensus       186 ~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i  264 (533)
T TIGR01236       186 AGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHL  264 (533)
T ss_pred             HHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence            9999999999 899999999999999999999999999999999999999777899999999999999999999999999


Q ss_pred             HHHHhhCCCc------ceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhh
Q 018922          255 MQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK  328 (349)
Q Consensus       255 ~~~~a~~~~~------~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~  328 (349)
                      ++.++. +++      ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus       265 ~~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~  343 (533)
T TIGR01236       265 WKWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELA  343 (533)
T ss_pred             HHHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHh
Confidence            999987 676      4999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCcccccCCC
Q 018922          329 AWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       329 ~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++++|+|+|+++++|||+++
T Consensus       344 ~l~~G~p~d~~t~~Gpli~~  363 (533)
T TIGR01236       344 EVKVGDPDDFSNFMGAVIDE  363 (533)
T ss_pred             cCCcCCCCCCCCcccccCCH
Confidence            99999999999999999974

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-70  Score=540.16  Aligned_cols=328  Identities=47%  Similarity=0.787  Sum_probs=305.7

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      ..++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|.++|.++|+++++.|++++
T Consensus        19 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~   98 (494)
T PRK09847         19 ENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHA   98 (494)
T ss_pred             ccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence            34789999998776677899999999999999999999999999999999997335999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      ++|++++++|+|||+.++...|+..+++.++|+++..+.+.++..+...+...+++++|+|||++|+|||||+...++++
T Consensus        99 ~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  178 (494)
T PRK09847         99 EELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL  178 (494)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHH
Confidence            99999999999999988764699999999999999888776654443333445789999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.+..|+.||+++.|+||||+.+|+.|.+.++.
T Consensus       179 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~  258 (494)
T PRK09847        179 GPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGD  258 (494)
T ss_pred             HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999777889999999999999999999999999999874


Q ss_pred             CCCcceEEeCCCCCceeEcCCC-CHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~da-d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      .+++|+++|+|||||+||++|+ |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++.+++|+|++++
T Consensus       259 ~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  338 (494)
T PRK09847        259 SNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPA  338 (494)
T ss_pred             hCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            3789999999999999999997 999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       339 ~~~gpli~~  347 (494)
T PRK09847        339 TTMGTLIDC  347 (494)
T ss_pred             CcCCCCcCH
Confidence            999999975

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=1.2e-70  Score=540.51  Aligned_cols=321  Identities=38%  Similarity=0.564  Sum_probs=301.4

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++  .|+.+|..+|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   79 (478)
T cd07085           2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE   79 (478)
T ss_pred             CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999875567899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      |++++++|+|||+.+++ .|+..+++.+++++.......++..+. ..+...+++++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~  158 (478)
T cd07085          80 LARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP  158 (478)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence            99999999999999998 699999999999988766655554332 1233467899999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++|+++| +.+.++.|+.||+++.|+||||+.+|+.|.+.++. 
T Consensus       159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-  236 (478)
T cd07085         159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA-  236 (478)
T ss_pred             HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence            9999999999999999999999999999999999999999998 45688999999999999999999999999999887 


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++++++
T Consensus       237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~  316 (478)
T cd07085         237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD  316 (478)
T ss_pred             cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +|||+++
T Consensus       317 ~gpli~~  323 (478)
T cd07085         317 MGPVISP  323 (478)
T ss_pred             cCCCcCH
Confidence            9999985

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=1.4e-70  Score=540.83  Aligned_cols=322  Identities=47%  Similarity=0.763  Sum_probs=302.7

Q ss_pred             eecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 018922           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (349)
Q Consensus        25 ~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (349)
                      ||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+++.|+.++.++|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la   80 (482)
T cd07119           1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA   80 (482)
T ss_pred             CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            68999987655678999999999999999999999999999999999974369999999999999999999999999999


Q ss_pred             HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHH
Q 018922          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL  184 (349)
Q Consensus       105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL  184 (349)
                      +++++|+|||+.+++ .|+..+++.++++++..++..+...+...+...+++++|+|||++|+|||||+...++++++||
T Consensus        81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL  159 (482)
T cd07119          81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL  159 (482)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence            999999999999998 5999999999999998876655543333344567899999999999999999999999999999


Q ss_pred             hcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCc
Q 018922          185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK  264 (349)
Q Consensus       185 ~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~  264 (349)
                      ++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|+++++. +++
T Consensus       160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~  238 (482)
T cd07119         160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK  238 (482)
T ss_pred             hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999999777789999999999999999999999999999987 889


Q ss_pred             ceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccc
Q 018922          265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP  344 (349)
Q Consensus       265 ~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gp  344 (349)
                      |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++||
T Consensus       239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp  318 (482)
T cd07119         239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP  318 (482)
T ss_pred             cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCC
Q 018922          345 QVLI  348 (349)
Q Consensus       345 l~~~  348 (349)
                      |+++
T Consensus       319 li~~  322 (482)
T cd07119         319 LVSA  322 (482)
T ss_pred             CCCH
Confidence            9974

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.2e-70  Score=540.50  Aligned_cols=322  Identities=42%  Similarity=0.678  Sum_probs=300.3

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      +++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+  .|+++|.++|.++|+++++.|+++++
T Consensus         1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   78 (479)
T cd07116           1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLE   78 (479)
T ss_pred             CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            3679999999876678899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|++++++|+|||+.++...|+..+++.++++++......+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus        79 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  158 (479)
T cd07116          79 MLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLA  158 (479)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHH
Confidence            99999999999999988745999999999999988776555443333333457889999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|.+.+++..|+.||+|+.|+||||+++|+.|.+.++. 
T Consensus       159 ~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-  236 (479)
T cd07116         159 PALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-  236 (479)
T ss_pred             HHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-
Confidence            9999999999999999999999999999998 99999999999777889999999999999999999999999999987 


Q ss_pred             CCcceEEeCCCCCceeEcCC------CCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          262 NLKPVSLELGGKSPLLIFDD------VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~d------ad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +++|+++|+|||||+||++|      ||+|.|++.++.+. +|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       237 ~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p  315 (479)
T cd07116         237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNP  315 (479)
T ss_pred             CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence            79999999999999999998      79999999999865 599999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +++++++|||+++
T Consensus       316 ~~~~~~~Gpli~~  328 (479)
T cd07116         316 LDTETMIGAQASL  328 (479)
T ss_pred             CCCCCcCCCCCCH
Confidence            9999999999975

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=1.2e-70  Score=540.01  Aligned_cols=321  Identities=43%  Similarity=0.664  Sum_probs=301.2

Q ss_pred             cceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      +++||||+|+.+.  ..++++||+ ||+++++++.++.+|+++++++|++||+  .|++++..+|.++|+++++.|++++
T Consensus         1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~   76 (473)
T cd07097           1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARK   76 (473)
T ss_pred             CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            4679999998753  347999999 5999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  179 (349)
                      ++|++++++|+|||+.+++ .|+..+++.++|++.......+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus        77 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~  155 (473)
T cd07097          77 EELARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWK  155 (473)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHH
Confidence            9999999999999999998 5999999999999988877655433221 2344678999999999999999999999999


Q ss_pred             HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      +++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+++..|+.||+++.|.||||+.+|+.|++.++
T Consensus       156 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa  235 (473)
T cd07097         156 IAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA  235 (473)
T ss_pred             HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999977778999999999999999999999999999998


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      . ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++
T Consensus       236 ~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~  314 (473)
T cd07097         236 A-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEG  314 (473)
T ss_pred             c-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       315 ~~~Gpli~~  323 (473)
T cd07097         315 VDIGPVVSE  323 (473)
T ss_pred             CcCCCCCCH
Confidence            999999974

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=2.6e-70  Score=538.16  Aligned_cols=327  Identities=59%  Similarity=0.939  Sum_probs=303.8

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .++||||+|+.++++..++++||+|++++++++.++.+|++.++++|++||+...|+.+|..+|.++|+++++.|.++++
T Consensus         4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~   83 (476)
T cd07091           4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD   83 (476)
T ss_pred             ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            47899999987666778999999999999999999999999999999999992125599999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|++++++|+|||+.++...|+..+++.+++++++.++..+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus        84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  163 (476)
T cd07091          84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA  163 (476)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence            99999999999999766556999999999999988776655544333344567899999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+.|++.++..
T Consensus       164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~  243 (476)
T cd07091         164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS  243 (476)
T ss_pred             HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999997778899999999999999999999999999988865


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++++++
T Consensus       244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~  323 (476)
T cd07091         244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF  323 (476)
T ss_pred             CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +|||+++
T Consensus       324 ~gpli~~  330 (476)
T cd07091         324 QGPQVSK  330 (476)
T ss_pred             CCCCcCH
Confidence            9999874

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=1.5e-70  Score=538.69  Aligned_cols=321  Identities=44%  Similarity=0.737  Sum_probs=302.5

Q ss_pred             eecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 018922           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (349)
Q Consensus        25 ~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (349)
                      ||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   78 (467)
T TIGR01804         1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA   78 (467)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6999999766668899999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHH
Q 018922          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL  184 (349)
Q Consensus       105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL  184 (349)
                      +++++|+|||+.++...|+..+++.++++++..+...+...+.......+++++|+|||++|+|||||+...++++++||
T Consensus        79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL  158 (467)
T TIGR01804        79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL  158 (467)
T ss_pred             HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence            99999999999998446999999999999998877655543322223457889999999999999999999999999999


Q ss_pred             hcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCc
Q 018922          185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK  264 (349)
Q Consensus       185 ~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~  264 (349)
                      ++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++. ++|
T Consensus       159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~  237 (467)
T TIGR01804       159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK  237 (467)
T ss_pred             hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999999767899999999999999999999999999999987 899


Q ss_pred             ceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccc
Q 018922          265 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP  344 (349)
Q Consensus       265 ~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gp  344 (349)
                      |+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++||
T Consensus       238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp  317 (467)
T TIGR01804       238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP  317 (467)
T ss_pred             cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCC
Q 018922          345 QVLI  348 (349)
Q Consensus       345 l~~~  348 (349)
                      |+++
T Consensus       318 li~~  321 (467)
T TIGR01804       318 LISA  321 (467)
T ss_pred             cCCH
Confidence            9975

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=2e-70  Score=542.34  Aligned_cols=325  Identities=35%  Similarity=0.561  Sum_probs=305.3

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE   97 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~   97 (349)
                      ...+++||||+|+.+  +.+++++||+| |+++++++.++.+|+++++++|++||+  .|++++..+|.++|+++++.|+
T Consensus        30 ~~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~  105 (512)
T cd07124          30 GREYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLR  105 (512)
T ss_pred             ccccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            345689999999963  46899999997 999999999999999999999999999  8999999999999999999999


Q ss_pred             HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      +++++|++++++|+|||+.+++ .|+..+++.++|+++.+.+..+...+...+...+++++|+|||++|+|||||+...+
T Consensus       106 ~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~  184 (512)
T cd07124         106 RRRFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILA  184 (512)
T ss_pred             HCHHHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHH
Confidence            9999999999999999999998 599999999999999887775544332334456889999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.+.
T Consensus       185 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~  264 (512)
T cd07124         185 GMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYER  264 (512)
T ss_pred             HHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             HhhC-----CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          258 AATS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       258 ~a~~-----~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      ++..     +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++
T Consensus       265 aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~  344 (512)
T cd07124         265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV  344 (512)
T ss_pred             HhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence            8863     58999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCC
Q 018922          333 GDPFDPAVRQGPQVLI  348 (349)
Q Consensus       333 g~p~~~~~~~Gpl~~~  348 (349)
                      |+|+|+++++|||+++
T Consensus       345 g~p~d~~~~~Gpli~~  360 (512)
T cd07124         345 GDPEDPEVYMGPVIDK  360 (512)
T ss_pred             CCCCCCCCcccCCcCH
Confidence            9999999999999985

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=3.5e-70  Score=537.45  Aligned_cols=321  Identities=34%  Similarity=0.508  Sum_probs=298.0

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      .+||||+|+.+ +..+++++||+||+++++++.++.+|+++++++|++||+  .|+++|..+|.++|++++++|++++++
T Consensus         2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e   78 (487)
T PRK09457          2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE   78 (487)
T ss_pred             CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence            36999999875 356799999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      |++++++|+|||+.+++ .|+..+++.++++++......+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus        79 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  157 (487)
T PRK09457         79 LAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP  157 (487)
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence            99999999999999998 69999999999988876655544332222344578899999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  262 (349)
                      ||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.++++.|+.||+++.|+||||+++|+.|++.++.+.
T Consensus       158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~  236 (487)
T PRK09457        158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP  236 (487)
T ss_pred             HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999999 6678999999999999999999999999999887645


Q ss_pred             CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccH-HHHHHHHHHHhhcccccCCC-CCCC
Q 018922          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDPF-DPAV  340 (349)
Q Consensus       263 ~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~-~~f~~~l~~~~~~l~~g~p~-~~~~  340 (349)
                      .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|.++++++++|||+ ++.+
T Consensus       237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~  316 (487)
T PRK09457        237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP  316 (487)
T ss_pred             CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence            678999999999999999999999999999999999999999999999999998 99999999999999999997 6789


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      ++|||+++
T Consensus       317 ~~Gpli~~  324 (487)
T PRK09457        317 FMGAVISE  324 (487)
T ss_pred             ccCCCcCH
Confidence            99999974

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=3.6e-70  Score=538.00  Aligned_cols=324  Identities=53%  Similarity=0.881  Sum_probs=302.7

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      .++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++  . |+.+|.++|.++|+++++.|++++
T Consensus         8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~   85 (484)
T cd07144           8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR   85 (484)
T ss_pred             cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence            4689999999865567899999999999999999999999999999999998  5 889999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      ++|++++++|+|||..++...|+..+++.+++++++.+...+...+...+...++.++|+|||++|+|||||+...++++
T Consensus        86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~  165 (484)
T cd07144          86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL  165 (484)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence            99999999999999877544699999999999999887775554433333345788999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.++.
T Consensus       166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~  245 (484)
T cd07144         166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ  245 (484)
T ss_pred             HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999777899999999999999999999999999999887


Q ss_pred             CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc-ccccCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPFDPA  339 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~-l~~g~p~~~~  339 (349)
                       +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++|+|++++
T Consensus       246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~  324 (484)
T cd07144         246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD  324 (484)
T ss_pred             -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence             89999999999999999999999999999999999999999999999999999999999999999985 9999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       325 ~~~gpli~~  333 (484)
T cd07144         325 TVVGPQVSK  333 (484)
T ss_pred             CcCCCCcCH
Confidence            999999974

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=2.5e-70  Score=541.63  Aligned_cols=323  Identities=28%  Similarity=0.375  Sum_probs=299.6

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      ..+++||||+|+.+  +.+++++||+ ||+++++++.++.+|+++++++|++||+  .|+++|..+|.++|++++++|++
T Consensus        31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  106 (522)
T cd07123          31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSG  106 (522)
T ss_pred             cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence            34688999999864  4689999999 5999999999999999999999999999  89999999999999999999996


Q ss_pred             -hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecc-eeEEEEcCCCccHHh
Q 018922           99 -HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPI-GVVGHIIPWNFPTTM  175 (349)
Q Consensus        99 -~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~-GVv~~i~p~n~P~~~  175 (349)
                       ++++|++++++|+|||+.++...|+..+++.++|++..+.+..+...+.. .+...+++++|+ |||++|+|||||+..
T Consensus       107 ~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~  186 (522)
T cd07123         107 KYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIG  186 (522)
T ss_pred             hCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHH
Confidence             89999999999999999988655889999999999988777655432221 134567889998 999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      ..++++||| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|+
T Consensus       187 ~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~  265 (522)
T cd07123         187 GNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW  265 (522)
T ss_pred             HHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence            999999999 6999999999999999999999999999999999999997777899999999999999999999999999


Q ss_pred             HHHhhCCCc------ceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc
Q 018922          256 QAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (349)
Q Consensus       256 ~~~a~~~~~------~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~  329 (349)
                      +.++. +++      ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++
T Consensus       266 ~~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~  344 (522)
T cd07123         266 KQIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKE  344 (522)
T ss_pred             HHHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhh
Confidence            99987 666      89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCcccccCCC
Q 018922          330 WVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       330 l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +++|+|+|+++++||||++
T Consensus       345 l~~G~p~d~~t~~Gpli~~  363 (522)
T cd07123         345 IKMGDPDDFSNFMGAVIDE  363 (522)
T ss_pred             CccCCCCCCCCCCCCCCCH
Confidence            9999999999999999985

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-70  Score=537.15  Aligned_cols=323  Identities=42%  Similarity=0.663  Sum_probs=302.3

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      +.++||||+|+.+ ++++++++||+||++|++++.++.+|+++++++|++||+  .|++++..+|.++|+++++.|++++
T Consensus         2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~   78 (475)
T PRK13473          2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENA   78 (475)
T ss_pred             CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            3467999999875 567899999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  179 (349)
                      ++|++++++|+|||..++...|+..+++.+++++...+.+.+...+. ..+...+++|+|+|||++|+|||||+...+++
T Consensus        79 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~  158 (475)
T PRK13473         79 DEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWK  158 (475)
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHH
Confidence            99999999999999998864599999999999998877765543221 12334578899999999999999999999999


Q ss_pred             HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      +++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.++
T Consensus       159 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa  237 (475)
T PRK13473        159 LAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA  237 (475)
T ss_pred             HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence            999999999999999999999999999999999 9999999999977789999999999999999999999999999998


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      . +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++++
T Consensus       238 ~-~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~  316 (475)
T PRK13473        238 D-SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDED  316 (475)
T ss_pred             h-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       317 ~~~gpli~~  325 (475)
T PRK13473        317 TELGPLISA  325 (475)
T ss_pred             CCCCCCCCH
Confidence            999999974

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=4.4e-70  Score=535.22  Aligned_cols=318  Identities=40%  Similarity=0.636  Sum_probs=299.9

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      +||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++  .|+++|.++|.++|++++++|++++++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l   78 (466)
T cd07138           1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL   78 (466)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999999876667899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      ++++++|+|||..++...|+..+++.++++++..+.+.+...    ....+++++|+|||++|+|||||+...++++++|
T Consensus        79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A  154 (466)
T cd07138          79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA  154 (466)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence            999999999999888645899999999999988766544321    1234678999999999999999999999999999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCC
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  263 (349)
                      |++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.++. ++
T Consensus       155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~  233 (466)
T cd07138         155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV  233 (466)
T ss_pred             HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence            99999999999999999999999999999999999999999777799999999999999999999999999999987 79


Q ss_pred             cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCccc
Q 018922          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG  343 (349)
Q Consensus       264 ~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~G  343 (349)
                      +|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|||||+++||+|+++|.++++++++|||+++++++|
T Consensus       234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  313 (466)
T cd07138         234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG  313 (466)
T ss_pred             CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCC
Q 018922          344 PQVLI  348 (349)
Q Consensus       344 pl~~~  348 (349)
                      ||+++
T Consensus       314 pli~~  318 (466)
T cd07138         314 PLASA  318 (466)
T ss_pred             ccCCH
Confidence            99974

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=5.7e-70  Score=535.50  Aligned_cols=319  Identities=34%  Similarity=0.554  Sum_probs=299.8

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      +||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|+++++.|.+++++|
T Consensus         1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (478)
T cd07086           1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL   77 (478)
T ss_pred             CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            58999999765 57899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      ++++++|+|||+.+++ .|+..+++.++|++...+.+.+...+.. .+...+++++|+|||++|+|||||+...++++++
T Consensus        78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~  156 (478)
T cd07086          78 GRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI  156 (478)
T ss_pred             HHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence            9999999999999988 6999999999999988877665443321 2234578899999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~a----glP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~  258 (349)
                      ||++||+||+|||+.+|.++..++++|.++    |+|+|++|+++|++. +++.|..||+++.|.||||+++|+.|++.+
T Consensus       157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a  235 (478)
T cd07086         157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV  235 (478)
T ss_pred             HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence            999999999999999999999999999998    999999999999655 889999999999999999999999999999


Q ss_pred             hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                      ++ +++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++
T Consensus       236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  314 (478)
T cd07086         236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE  314 (478)
T ss_pred             hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            87 88999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      ++++|||+++
T Consensus       315 ~~~~gpli~~  324 (478)
T cd07086         315 GTLVGPLINQ  324 (478)
T ss_pred             CCCCCCCCCH
Confidence            9999999985

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=9.9e-70  Score=536.83  Aligned_cols=324  Identities=30%  Similarity=0.531  Sum_probs=302.5

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      ...++||||+|+.+  ...++++||+ |++++++++.++.+|+++++++|++|++  .|+++|..+|.++|++++++|++
T Consensus        31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  106 (511)
T TIGR01237        31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER  106 (511)
T ss_pred             cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            45578999999974  4568999999 5999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.++. .|+..+++.++|+++.+....+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus       107 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~  185 (511)
T TIGR01237       107 RRHELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV  185 (511)
T ss_pred             CHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence            999999999999999999987 599999999999999887765543321 223456788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.
T Consensus       186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~  265 (511)
T TIGR01237       186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED  265 (511)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777899999999999999999999999999998


Q ss_pred             Hhh-----CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       258 ~a~-----~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      ++.     .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++
T Consensus       266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~  345 (511)
T TIGR01237       266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV  345 (511)
T ss_pred             HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence            873     278999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCC
Q 018922          333 GDPFDPAVRQGPQVLI  348 (349)
Q Consensus       333 g~p~~~~~~~Gpl~~~  348 (349)
                      |+|+++++++|||+++
T Consensus       346 g~~~~~~~~~gpli~~  361 (511)
T TIGR01237       346 GPTDDPSTQVGPVIDQ  361 (511)
T ss_pred             CCCCCCCCcCCCCCCH
Confidence            9999999999999974

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=9.1e-70  Score=536.15  Aligned_cols=328  Identities=28%  Similarity=0.465  Sum_probs=305.4

Q ss_pred             cCccccccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHH
Q 018922           15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA   93 (349)
Q Consensus        15 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a   93 (349)
                      +...+..+++||+|+|+.+  +..++++||+ ||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++
T Consensus        12 ~~~~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a   87 (500)
T cd07083          12 KEEFGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAA   87 (500)
T ss_pred             HhhccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHH
Confidence            3444667789999999874  4578999997 6999999999999999999999999999  899999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCcee--eccCCccceEEeecceeEEEEcCCCc
Q 018922           94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNF  171 (349)
Q Consensus        94 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~  171 (349)
                      +.|++++++|++++++|+|||+.++. .|+..+++.++++++.+.+..+...  +...+...+++++|+|||++|+||||
T Consensus        88 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~  166 (500)
T cd07083          88 DLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNF  166 (500)
T ss_pred             HHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCcc
Confidence            99999999999999999999999987 6999999999999998877655432  11233456788999999999999999


Q ss_pred             cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHH
Q 018922          172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG  251 (349)
Q Consensus       172 P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g  251 (349)
                      |+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|
T Consensus       167 P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g  246 (500)
T cd07083         167 PVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETG  246 (500)
T ss_pred             HHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHH
Confidence            99999999999999999999999999999999999999999999999999999778889999999999999999999999


Q ss_pred             HHHHHHHhhCCC------cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHH
Q 018922          252 RQVMQAAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE  325 (349)
Q Consensus       252 ~~i~~~~a~~~~------~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~  325 (349)
                      +.|.+.++. ++      +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.+
T Consensus       247 ~~v~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~  325 (500)
T cd07083         247 KKIYEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLK  325 (500)
T ss_pred             HHHHHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHH
Confidence            999999887 54      99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcccccCCCCCCCcccccCCC
Q 018922          326 KAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       326 ~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +++++++|||+++++++|||+++
T Consensus       326 ~~~~~~~G~p~~~~~~~Gpli~~  348 (500)
T cd07083         326 RAERLSVGPPEENGTDLGPVIDA  348 (500)
T ss_pred             HHHcCCCCCCCCCCCCCCCCCCH
Confidence            99999999999999999999985

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=1.3e-69  Score=532.06  Aligned_cols=317  Identities=30%  Similarity=0.521  Sum_probs=294.6

Q ss_pred             eecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 018922           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (349)
Q Consensus        25 ~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (349)
                      +|||+|+.+  ...++++||+||+++++++.++.+|+++++++|++|++  .|+++|.++|.++|+++++.|++++++|+
T Consensus         2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la   77 (474)
T cd07130           2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG   77 (474)
T ss_pred             eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            799999874  46799999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      +++++|+|||+.++. .|+..+++.++|++...+.+.+...+.. .+...+++++|+|||++|+|||||+...++++++|
T Consensus        78 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  156 (474)
T cd07130          78 KLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA  156 (474)
T ss_pred             HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence            999999999999987 6999999999999887766554433321 23345778999999999999999999999999999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~~~----l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      |++||+||+|||+.+|.++..++++    |.++|+|+|++|+++| +.+.++.|++||+|+.|.||||+++|+.|++.++
T Consensus       157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g-~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa  235 (474)
T cd07130         157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA  235 (474)
T ss_pred             HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeC-ChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence            9999999999999999999887765    5799999999999999 4567999999999999999999999999999988


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      + +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||++++
T Consensus       236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~  314 (474)
T cd07130         236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG  314 (474)
T ss_pred             h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence            7 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       315 ~~~Gpli~~  323 (474)
T cd07130         315 TLVGPLHTK  323 (474)
T ss_pred             CCCCCCcCH
Confidence            999999985

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=2.8e-69  Score=530.47  Aligned_cols=323  Identities=42%  Similarity=0.697  Sum_probs=299.9

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      +||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.+.|+.+|.++|.++|+++++.|++++++|
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el   80 (471)
T cd07139           1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL   80 (471)
T ss_pred             CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            48999998765567899999999999999999999999999999999998434999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCce-eeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      ++++++|+|||..++...|+..+++.+++++...+...+.. .+...+...+++++|+|||++|+|||||+...++++++
T Consensus        81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~  160 (471)
T cd07139          81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP  160 (471)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence            99999999999987765699999999999998876654322 22222344578899999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  262 (349)
                      ||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++| +.+.++.|+.|++++.|.||||+.+|+.|.+.++. +
T Consensus       161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~  238 (471)
T cd07139         161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R  238 (471)
T ss_pred             HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence            999999999999999999999999999999999999999998 56788999999999999999999999999999887 8


Q ss_pred             CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcc
Q 018922          263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ  342 (349)
Q Consensus       263 ~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~  342 (349)
                      ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++
T Consensus       239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~  318 (471)
T cd07139         239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI  318 (471)
T ss_pred             CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCC
Q 018922          343 GPQVLI  348 (349)
Q Consensus       343 Gpl~~~  348 (349)
                      |||+++
T Consensus       319 gpli~~  324 (471)
T cd07139         319 GPLASA  324 (471)
T ss_pred             CCCCCH
Confidence            999974

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=1.3e-69  Score=533.18  Aligned_cols=317  Identities=26%  Similarity=0.321  Sum_probs=286.5

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .+||||+|+.+. +.+++++||+||+++++++.++ +|+++|+++|++| |+  .|+.+|..+|+++|+++++.|+++++
T Consensus         2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~   77 (513)
T cd07128           2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE   77 (513)
T ss_pred             ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            579999999763 5789999999999999999876 8999999999998 68  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcC--------ceeeccC-C-ccceEEeec-ceeEEEEcCCC
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--------EVLKMSR-A-LQGYTLREP-IGVVGHIIPWN  170 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~GVv~~i~p~n  170 (349)
                      +|+++ ++|+|||+.+++ .|+..+++.++||++.++...+        +..+... . ...+++++| +|||++|+|||
T Consensus        78 ~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN  155 (513)
T cd07128          78 DLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN  155 (513)
T ss_pred             HHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence            99996 899999999988 6999999999999998766542        2222111 1 134677999 59999999999


Q ss_pred             ccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChH
Q 018922          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD  249 (349)
Q Consensus       171 ~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~ag-lP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~  249 (349)
                      ||++..++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+++|++.++++.+   +.++.|+||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~  232 (513)
T cd07128         156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA  232 (513)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 99999999998544343332   6789999999999


Q ss_pred             HHHHHHHHHh-hCCCcceEEeCCCCCceeEcCCCC-----HHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHH
Q 018922          250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL  323 (349)
Q Consensus       250 ~g~~i~~~~a-~~~~~~~~le~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l  323 (349)
                      +|+.|++.++ ..+++|+++|+|||||+||++|||     +|.+++.+++++|.|+||.|++++|||||+++|++|+++|
T Consensus       233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l  312 (513)
T cd07128         233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL  312 (513)
T ss_pred             HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence            9999999863 237899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHhhcccccCCCCCCCcccccCCC
Q 018922          324 VEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       324 ~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      .++++++++|+|+++++++|||+++
T Consensus       313 ~~~~~~l~~G~p~~~~~~lGpli~~  337 (513)
T cd07128         313 KARLAKVVVGDPRLEGVRMGPLVSR  337 (513)
T ss_pred             HHHHHhcccCCCccCCCCcCCCCCH
Confidence            9999999999999999999999985

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=1.8e-69  Score=531.62  Aligned_cols=320  Identities=44%  Similarity=0.720  Sum_probs=302.1

Q ss_pred             eecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 018922           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (349)
Q Consensus        25 ~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (349)
                      ||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++  .|+++|..+|.++|+++++.|++++++|+
T Consensus         1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~   78 (468)
T cd07088           1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA   78 (468)
T ss_pred             CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence            6899998765678899999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      +++++|+|||..+++ .|+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus        79 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A  157 (468)
T cd07088          79 KLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA  157 (468)
T ss_pred             HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence            999999999999988 6999999999999988877655443322 23456788999999999999999999999999999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCC
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  263 (349)
                      |++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.++. ++
T Consensus       158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~  236 (468)
T cd07088         158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI  236 (468)
T ss_pred             HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence            99999999999999999999999999999999999999999777788999999999999999999999999999887 89


Q ss_pred             cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCccc
Q 018922          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG  343 (349)
Q Consensus       264 ~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~G  343 (349)
                      +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|
T Consensus       237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g  316 (468)
T cd07088         237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG  316 (468)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCC
Q 018922          344 PQVLI  348 (349)
Q Consensus       344 pl~~~  348 (349)
                      ||+++
T Consensus       317 pli~~  321 (468)
T cd07088         317 PLVNE  321 (468)
T ss_pred             cccCH
Confidence            99974

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-69  Score=534.70  Aligned_cols=323  Identities=33%  Similarity=0.521  Sum_probs=300.8

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      ...++||||+|+.+  ..+++++||+ ||++|++++.++.+|+++++++|++|++  .|++++..+|.++|++++++|.+
T Consensus        35 ~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~  110 (514)
T PRK03137         35 QDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRR  110 (514)
T ss_pred             cccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            45678999999974  4679999999 6999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhc-CceeeccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.+++|++.+.+.. +.......+...+++++|+|||++|+|||||+...+
T Consensus       111 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~  189 (514)
T PRK03137        111 RKHEFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMA  189 (514)
T ss_pred             CHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHH
Confidence            999999999999999999998 699999999999998886654 222221233456789999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.+.
T Consensus       190 ~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~  269 (514)
T PRK03137        190 GMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYER  269 (514)
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999999999999999999999999999


Q ss_pred             HhhC-----CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          258 AATS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       258 ~a~~-----~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      ++..     ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       270 aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~  349 (514)
T PRK03137        270 AAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV  349 (514)
T ss_pred             HhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence            8751     57999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCC
Q 018922          333 GDPFDPAVRQGPQVLI  348 (349)
Q Consensus       333 g~p~~~~~~~Gpl~~~  348 (349)
                      |+|++++ ++|||+++
T Consensus       350 g~p~~~~-~~Gpli~~  364 (514)
T PRK03137        350 GNPEDNA-YMGPVINQ  364 (514)
T ss_pred             CCCCCcc-CcCCCCCH
Confidence            9999998 99999985

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=4.4e-69  Score=529.07  Aligned_cols=320  Identities=32%  Similarity=0.506  Sum_probs=299.8

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ++||||+|+.+.+++.++++||+||++|++++.++.+|+++++++|++|++  .|+++|..+|.++|+++++.|++++++
T Consensus         2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~   79 (477)
T TIGR01722         2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE   79 (477)
T ss_pred             ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999765667899999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      |++++++|+|||+.+++ .|+..+++.++|++.......++..+.. .+...+++++|+|||++|+|||||+...+++++
T Consensus        80 l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~  158 (477)
T TIGR01722        80 IAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP  158 (477)
T ss_pred             HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence            99999999999999988 6999999999999987776655443321 233456789999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+++|.++..+.++|.++|+|+|++|+++| +.+.++.|+.||+|+.|+||||+++|+.|.+.++. 
T Consensus       159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~-  236 (477)
T TIGR01722       159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA-  236 (477)
T ss_pred             HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence            9999999999999999999999999999999999999999998 55678899999999999999999999999999887 


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                      .+||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|++++++
T Consensus       237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~  315 (477)
T TIGR01722       237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE  315 (477)
T ss_pred             cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            889999999999999999999999999999999999999999999999999998 9999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      ||||+++
T Consensus       316 ~Gp~i~~  322 (477)
T TIGR01722       316 MGPLITP  322 (477)
T ss_pred             cCCCcCH
Confidence            9999974

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=3.6e-69  Score=530.57  Aligned_cols=321  Identities=40%  Similarity=0.657  Sum_probs=301.4

Q ss_pred             eeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      +||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++|++  .|++++..+|.++|+++++.|.+++++
T Consensus         1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e   78 (478)
T cd07131           1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE   78 (478)
T ss_pred             CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999765678899999998 689999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      |++++++|+|||+.+++ .|+..+++.+++++...+...+...+.. .....+++++|+|||++|+|||||+...+++++
T Consensus        79 la~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~  157 (478)
T cd07131          79 LARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF  157 (478)
T ss_pred             HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence            99999999999999988 5999999999999988776655443321 223457889999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.+.+++ 
T Consensus       158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~-  236 (478)
T cd07131         158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR-  236 (478)
T ss_pred             HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence            9999999999999999999999999999999999999999999777789999999999999999999999999999987 


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                      +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++|++|+++|.++++++++|+|++++++
T Consensus       237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~  316 (478)
T cd07131         237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD  316 (478)
T ss_pred             cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +|||+++
T Consensus       317 ~gpli~~  323 (478)
T cd07131         317 MGPLINE  323 (478)
T ss_pred             CCcCCCH
Confidence            9999985

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=3.2e-69  Score=528.62  Aligned_cols=324  Identities=44%  Similarity=0.688  Sum_probs=302.2

Q ss_pred             cccccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHH
Q 018922           11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIML   90 (349)
Q Consensus        11 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~   90 (349)
                      .--|.+......++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+++|..+|.++|+
T Consensus        11 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~   88 (480)
T cd07111          11 ALAWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLY   88 (480)
T ss_pred             HHHHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHH
Confidence            334555566677899999999765567899999999999999999999999999999999999  899999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCC
Q 018922           91 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN  170 (349)
Q Consensus        91 ~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n  170 (349)
                      ++++.|++++++|++++++|+|||+.+++..|+..+++.+++++.+.+...+          .+..++|+|||++|+|||
T Consensus        89 ~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN  158 (480)
T cd07111          89 RIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWN  158 (480)
T ss_pred             HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCc
Confidence            9999999999999999999999999998755999999999998877654321          134589999999999999


Q ss_pred             ccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHH
Q 018922          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV  250 (349)
Q Consensus       171 ~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~  250 (349)
                      ||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +++..|+.||+++.|+||||+.+
T Consensus       159 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~  237 (480)
T cd07111         159 FPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEV  237 (480)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHH
Confidence            99999999999999999999999999999999999999999999999999999854 67899999999999999999999


Q ss_pred             HHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc
Q 018922          251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       251 g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l  330 (349)
                      |+.|.+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++
T Consensus       238 g~~v~~~aa~-~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~  316 (480)
T cd07111         238 GRALRRATAG-TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHL  316 (480)
T ss_pred             HHHHHHHHhc-cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhc
Confidence            9999999887 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCcccccCCC
Q 018922          331 VVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       331 ~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|+|+++++++|||+++
T Consensus       317 ~vg~p~~~~~~~gpli~~  334 (480)
T cd07111         317 RVGDPLDKAIDMGAIVDP  334 (480)
T ss_pred             CCCCCCCCCCccccccCH
Confidence            999999999999999874

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-69  Score=527.23  Aligned_cols=308  Identities=26%  Similarity=0.412  Sum_probs=287.4

Q ss_pred             CCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch
Q 018922           36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH  115 (349)
Q Consensus        36 ~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  115 (349)
                      .++++++||+||++|++++.++.+|+++++++|++||+  .|++++..+|.++|+++++.|++|+++|++++++|+|||+
T Consensus         6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   83 (462)
T PRK13968          6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI   83 (462)
T ss_pred             CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence            45788999999999999999999999999999999999  8999999999999999999999999999999999999999


Q ss_pred             hhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecC
Q 018922          116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA  195 (349)
Q Consensus       116 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps  195 (349)
                      .+++ .|+..+++.++|++.......+...........+++++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus        84 ~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs  162 (462)
T PRK13968         84 NQAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA  162 (462)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence            9988 699999999999998876554322111223455788999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCc
Q 018922          196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP  275 (349)
Q Consensus       196 ~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~  275 (349)
                      +.+|+++..+++++.++|+|+|++|+++|++.. ...++.||+++.|+||||+++|+.|.+.++. ++||+++|+|||||
T Consensus       163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p  240 (462)
T PRK13968        163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP  240 (462)
T ss_pred             CcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCc
Confidence            999999999999999999999999999985544 4568899999999999999999999999987 89999999999999


Q ss_pred             eeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       276 ~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~  313 (462)
T PRK13968        241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARF  313 (462)
T ss_pred             eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999974

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=5.6e-69  Score=527.04  Aligned_cols=317  Identities=38%  Similarity=0.623  Sum_probs=296.9

Q ss_pred             CeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 018922           28 GEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE  107 (349)
Q Consensus        28 g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~  107 (349)
                      |+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++  .|++++..+|.++|++++++|++++++|++++
T Consensus         1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~   78 (465)
T cd07151           1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL   78 (465)
T ss_pred             CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            5777665567899999999999999999999999999999999999  89999999999999999999999999999999


Q ss_pred             HHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhc
Q 018922          108 ALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA  186 (349)
Q Consensus       108 ~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~a  186 (349)
                      ++|+|||+.++. .|+..+++.+++++.......+...+.. .+...+++++|+|||++|+|||||++..++++++||++
T Consensus        79 ~~e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa  157 (465)
T cd07151          79 IRESGSTRIKAN-IEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL  157 (465)
T ss_pred             HHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence            999999999988 5999999999999988776655443322 23446788999999999999999999999999999999


Q ss_pred             CCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcc
Q 018922          187 GCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP  265 (349)
Q Consensus       187 GN~vvlkps~~~~~t~-~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~  265 (349)
                      ||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++|++.+++..|+.||.++.|.||||+++|+.|++.+++ +++|
T Consensus       158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~  236 (465)
T cd07151         158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK  236 (465)
T ss_pred             CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence            9999999999999996 7899999999999999999999777889999999999999999999999999999988 8999


Q ss_pred             eEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCccccc
Q 018922          266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ  345 (349)
Q Consensus       266 ~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl  345 (349)
                      +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||
T Consensus       237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl  316 (465)
T cd07151         237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL  316 (465)
T ss_pred             EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 018922          346 VLI  348 (349)
Q Consensus       346 ~~~  348 (349)
                      +++
T Consensus       317 i~~  319 (465)
T cd07151         317 INE  319 (465)
T ss_pred             cCH
Confidence            974

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=8.2e-69  Score=527.73  Aligned_cols=320  Identities=33%  Similarity=0.496  Sum_probs=295.4

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      +||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|+++++.|++++++|
T Consensus         1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   77 (484)
T TIGR03240         1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL   77 (484)
T ss_pred             CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence            4899999875 457899999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      ++++++|+|||..++. .|+..+++.+++++.......+...+.......+++++|+|||++|+|||||+...++++++|
T Consensus        78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A  156 (484)
T TIGR03240        78 ARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA  156 (484)
T ss_pred             HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence            9999999999999988 699999999999887766554443221223345788999999999999999999999999999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCC
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  263 (349)
                      |++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.||+++.|+||||+++|+.|++.++....
T Consensus       157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~  235 (484)
T TIGR03240       157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE  235 (484)
T ss_pred             HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence            99999999999999999999999999999999999999999 56789999999999999999999999999998876456


Q ss_pred             cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccH-HHHHHHHHHHhhcccccCC-CCCCCc
Q 018922          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGDP-FDPAVR  341 (349)
Q Consensus       264 ~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~-~~f~~~l~~~~~~l~~g~p-~~~~~~  341 (349)
                      +++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .+++++
T Consensus       236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~  315 (484)
T TIGR03240       236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF  315 (484)
T ss_pred             CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence            88999999999999999999999999999999999999999999999999985 9999999999999999997 577899


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +|||+++
T Consensus       316 ~gpli~~  322 (484)
T TIGR03240       316 MGAVISL  322 (484)
T ss_pred             ccccCCH
Confidence            9999874

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=5.9e-69  Score=528.35  Aligned_cols=311  Identities=31%  Similarity=0.434  Sum_probs=294.8

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCC-ceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g-~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      ..++||||+|+.  ++++++++||+|+ ++|++++.++.+|+++++++|++||+  .|+++|..+|.++|+++++.|+++
T Consensus        37 ~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~  112 (500)
T TIGR01238        37 QAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELH  112 (500)
T ss_pred             ecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence            458999999987  4678999999996 89999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  179 (349)
                      +++|++++++|+|||+.++. .|+..+++.++++++..+...+           ...++|+|||++|+|||||+...+++
T Consensus       113 ~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~pwN~P~~~~~~~  180 (500)
T TIGR01238       113 MPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISPWNFPLAIFTGQ  180 (500)
T ss_pred             HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECCCchHHHHHHHH
Confidence            99999999999999999997 6999999999999987754321           13589999999999999999999999


Q ss_pred             HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      +++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.|.+.++
T Consensus       181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa  260 (500)
T TIGR01238       181 ISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA  260 (500)
T ss_pred             HHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999877788999999999999999999999999999998


Q ss_pred             hCCC---cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          260 TSNL---KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       260 ~~~~---~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      . ++   +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+
T Consensus       261 ~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~  339 (500)
T TIGR01238       261 Q-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH  339 (500)
T ss_pred             h-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence            7 54   7999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      +++++|||++++
T Consensus       340 ~~~~~~Gpli~~  351 (500)
T TIGR01238       340 LLTTDVGPVIDA  351 (500)
T ss_pred             CCCCCcCCCCCH
Confidence            999999999985

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-69  Score=529.01  Aligned_cols=320  Identities=26%  Similarity=0.372  Sum_probs=288.9

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhc-ccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF-DHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~-~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      .+++||||+|+.+. +.+++++||+||+++++++. +.+|+++|+++|++|+ +  .|+++|..+|.++|++++++|+++
T Consensus         4 ~~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~   79 (521)
T PRK11903          4 LLANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQAN   79 (521)
T ss_pred             hhhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHH
Confidence            34689999999753 46799999999999999997 8899999999999995 7  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc---------CCccceEEeec-ceeEEEEcCC
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---------RALQGYTLREP-IGVVGHIIPW  169 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P-~GVv~~i~p~  169 (349)
                      +++|++++++|+|||+.+++ .|+..+++.++||+.++..+.+......         .....++.++| +|||++|+||
T Consensus        80 ~~ela~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pw  158 (521)
T PRK11903         80 RDAYYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAF  158 (521)
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCc
Confidence            99999999999999999998 6999999999999998766543221110         11224667899 5999999999


Q ss_pred             CccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCCh
Q 018922          170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST  248 (349)
Q Consensus       170 n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~ag-lP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~  248 (349)
                      |||+.+.++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.++++.|   ++++.|+||||+
T Consensus       159 N~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~  235 (521)
T PRK11903        159 NFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSA  235 (521)
T ss_pred             chHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCH
Confidence            99999999999999999999999999999999999999999999 99999999999665554444   799999999999


Q ss_pred             HHHHHHHHHHh-hCCCcceEEeCCCCCceeEcCCCC-----HHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHH
Q 018922          249 DVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK  322 (349)
Q Consensus       249 ~~g~~i~~~~a-~~~~~~~~le~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~  322 (349)
                      ++|+.|++.++ ..+++|+++|+|||||+||++|||     ++.+++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus       236 ~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~  315 (521)
T PRK11903        236 ETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEA  315 (521)
T ss_pred             HHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHH
Confidence            99999998753 237899999999999999999999     599999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccCCCCCCCcccccCCC
Q 018922          323 LVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       323 l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+++++++++|+|+++++++|||+++
T Consensus       316 L~~~~~~l~~G~p~~~~~~~Gpli~~  341 (521)
T PRK11903        316 LAARLAKTTVGNPRNDGVRMGPLVSR  341 (521)
T ss_pred             HHHHHHhccCCCCCCCcCccCCCCCH
Confidence            99999999999999999999999985

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=9.3e-69  Score=523.15  Aligned_cols=305  Identities=33%  Similarity=0.522  Sum_probs=286.2

Q ss_pred             EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 018922           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (349)
Q Consensus        39 ~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  118 (349)
                      ++++||+||+++++++.++.+|+++++++|++||+  .|+.+|.++|.++|++++++|++++++|++++++|+|||+.++
T Consensus         3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   80 (457)
T PRK09406          3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA   80 (457)
T ss_pred             eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence            67899999999999999999999999999999999  8999999999999999999999999999999999999999998


Q ss_pred             hhCcHHHHHHHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecC
Q 018922          119 KMGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA  195 (349)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps  195 (349)
                      . .|+..+++.++|+++.+.+..+.....   ......+++++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus        81 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps  159 (457)
T PRK09406         81 K-AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA  159 (457)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence            7 699999999999998877665432111   122345788999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCc
Q 018922          196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP  275 (349)
Q Consensus       196 ~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~  275 (349)
                      +.+|+++..++++|.++|+|+|++|++++ +.+.+..|+.||+++.|+||||+++|+.|.+.++. ++||+++|+|||||
T Consensus       160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~  237 (457)
T PRK09406        160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP  237 (457)
T ss_pred             CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence            99999999999999999999999999986 44567889999999999999999999999999887 89999999999999


Q ss_pred             eeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       276 ~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~  310 (457)
T PRK09406        238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATE  310 (457)
T ss_pred             eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999974

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=9.4e-68  Score=518.37  Aligned_cols=317  Identities=33%  Similarity=0.528  Sum_probs=293.7

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      ..++||||+|+.  +.++++++||+|++++++++.++.+|+++|+++|++|+.     .++..+|.++|++++++|++++
T Consensus         3 ~~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~   75 (472)
T TIGR03250         3 AEALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARK   75 (472)
T ss_pred             CCCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhH
Confidence            457899999986  356899999999999999999999999999999988764     6899999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-----cCCccceEEeecc-eeEEEEcCCCccHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPI-GVVGHIIPWNFPTT  174 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~-GVv~~i~p~n~P~~  174 (349)
                      ++|++++++|+|||+.+++ .|+..+++.++|++..+....+...+.     ......++.++|+ |||++|+|||||+.
T Consensus        76 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~  154 (472)
T TIGR03250        76 EEISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMN  154 (472)
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHH
Confidence            9999999999999999988 699999999999998877665543221     1123457889998 99999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ..++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|.+.+.+..|+.||+++.|.||||+.+|+.|
T Consensus       155 ~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i  234 (472)
T TIGR03250       155 QVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI  234 (472)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999777889999999999999999999999999


Q ss_pred             HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      .+.++   ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+
T Consensus       235 ~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~  311 (472)
T TIGR03250       235 AARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGD  311 (472)
T ss_pred             HHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCC
Confidence            98873   689999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+++
T Consensus       312 p~~~~~~~gpli~~  325 (472)
T TIGR03250       312 PMDPSVDMGTVIDE  325 (472)
T ss_pred             CCCCCCcCCCCCCH
Confidence            99999999999874

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=7e-68  Score=524.49  Aligned_cols=321  Identities=35%  Similarity=0.485  Sum_probs=300.0

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      -.||+|+|+.  ++++++++||+| |+++++++.++.+|+++++++|++|++  .|+.++..+|.++|+++++.|+++++
T Consensus        34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  109 (518)
T cd07125          34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRG  109 (518)
T ss_pred             CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence            3589999983  567899999999 999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCce-eeccCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      +|++++++|+|||+.+++ .|+..+++.++++++.+++..+.. .+...+...+++++|+|||++|+|||||+...++++
T Consensus       110 ~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i  188 (518)
T cd07125         110 ELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQI  188 (518)
T ss_pred             HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence            999999999999999998 699999999999998887655432 232234456788999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+++..|+.|++++.|+||||+++|+.|++.+++
T Consensus       189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~  268 (518)
T cd07125         189 AAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAE  268 (518)
T ss_pred             HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999766789999999999999999999999999998875


Q ss_pred             C--CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          261 S--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       261 ~--~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                      +  .++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++
T Consensus       269 ~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  348 (518)
T cd07125         269 RDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDL  348 (518)
T ss_pred             ccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCC
Confidence            2  37999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      ++++||++++
T Consensus       349 ~~~~gpli~~  358 (518)
T cd07125         349 STDVGPLIDK  358 (518)
T ss_pred             CCCcCCCcCH
Confidence            9999999975

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1e-67  Score=520.38  Aligned_cols=322  Identities=29%  Similarity=0.455  Sum_probs=297.3

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++  .|+.++..+|.++|+++++.|++
T Consensus        13 ~~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~   90 (496)
T PLN00412         13 GDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKE   90 (496)
T ss_pred             ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence            3667899999999765667899999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCc--eeec---c---CCccceEEeecceeEEEEcCCC
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE--VLKM---S---RALQGYTLREPIGVVGHIIPWN  170 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~---~---~~~~~~~~~~P~GVv~~i~p~n  170 (349)
                      ++++|++++++|+|||+.++. .|+..+++.++|++..+.+..++  ..+.   .   .+...+++++|+|||++|+|||
T Consensus        91 ~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N  169 (496)
T PLN00412         91 HKAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFN  169 (496)
T ss_pred             hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCC
Confidence            999999999999999999987 69999999999998776554322  1111   1   1223467899999999999999


Q ss_pred             ccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHH
Q 018922          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV  250 (349)
Q Consensus       171 ~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~  250 (349)
                      ||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|..||+++.|.|||| .+
T Consensus       170 ~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~  248 (496)
T PLN00412        170 YPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DT  248 (496)
T ss_pred             chHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HH
Confidence            99999999999999999999999999999999999999999999999999999977788999999999999999999 99


Q ss_pred             HHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc
Q 018922          251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       251 g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l  330 (349)
                      |+.|.+.+   .++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++
T Consensus       249 g~~v~~~a---~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~  325 (496)
T PLN00412        249 GIAISKKA---GMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKL  325 (496)
T ss_pred             HHHHHHHh---CCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhC
Confidence            99999887   368999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCcccccCCC
Q 018922          331 VVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       331 ~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|+|++ ++++||++++
T Consensus       326 ~~g~p~~-~~~~gp~i~~  342 (496)
T PLN00412        326 TVGPPED-DCDITPVVSE  342 (496)
T ss_pred             ccCCCcc-cCCcCCCcCH
Confidence            9999987 7899999974

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=8.4e-68  Score=533.97  Aligned_cols=317  Identities=26%  Similarity=0.352  Sum_probs=287.0

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .+||||+|+.+. .++++++||+||+++++++.++ .|+++|+++|++| |+  .|+++|..+|.++|++++++|+++++
T Consensus         2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~   77 (663)
T TIGR02278         2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE   77 (663)
T ss_pred             ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            468999998763 5679999999999999999999 6999999999996 88  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhc--------CceeeccC--CccceEEeecc-eeEEEEcCCC
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMSR--ALQGYTLREPI-GVVGHIIPWN  170 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~P~-GVv~~i~p~n  170 (349)
                      +|++ +++|+|||+.+++ .|+..+++.++||++..++..        ++..+...  ....++.++|+ |||++|+|||
T Consensus        78 ela~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN  155 (663)
T TIGR02278        78 ALYA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN  155 (663)
T ss_pred             HHHH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence            9999 5999999999988 699999999999999876532        33323211  22457899998 9999999999


Q ss_pred             ccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChH
Q 018922          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD  249 (349)
Q Consensus       171 ~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~ag-lP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~  249 (349)
                      ||+...++++++||++||+||+|||+.+|+++..++++|.++| +|+|++|+++|+.   +..+..+++++.|+||||++
T Consensus       156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~  232 (663)
T TIGR02278       156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA  232 (663)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence            9999999999999999999999999999999999999999999 9999999999842   33333347889999999999


Q ss_pred             HHHHHHHHHh-hCCCcceEEeCCCCCceeEcCCCC-----HHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHH
Q 018922          250 VGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL  323 (349)
Q Consensus       250 ~g~~i~~~~a-~~~~~~~~le~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l  323 (349)
                      +|+.|++.++ ..+++|+++|+|||||+||++|||     +|.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l  312 (663)
T TIGR02278       233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL  312 (663)
T ss_pred             HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence            9999998753 237899999999999999999999     9999999999999999999999999999999999999999


Q ss_pred             HHHhhcccccCCCCCCCcccccCCC
Q 018922          324 VEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       324 ~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      .++++++++|+|+++++++||||++
T Consensus       313 ~~~~~~l~vG~p~~~~t~~Gpli~~  337 (663)
T TIGR02278       313 QARLAKVVLGDPREEGVDMGPLVSL  337 (663)
T ss_pred             HHHHHhccCCCccccCCCcCCCCCH
Confidence            9999999999999999999999984

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=9.7e-68  Score=515.75  Aligned_cols=305  Identities=41%  Similarity=0.649  Sum_probs=287.0

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||+++++++.++.+|+++|+++|++||+.+.|+. +..+|.++|+++++.|++++++|++++++|+|||..+++ 
T Consensus         1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   78 (455)
T cd07120           1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR-   78 (455)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999998323998 999999999999999999999999999999999999998 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      .|+..+++.++||++......+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~  158 (455)
T cd07120          79 FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ  158 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence            59999999999999988776654433223345678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          201 IALYFAHLAKL-AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       201 t~~~l~~~l~~-aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      ++..++++|.+ +|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++. ++||+++|+|||||+||+
T Consensus       159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~  237 (455)
T cd07120         159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF  237 (455)
T ss_pred             HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence            99999999999 7999999999999777889999999999999999999999999999887 799999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       280 ~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||+|.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus       238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~  306 (455)
T cd07120         238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDR  306 (455)
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999874

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=6.4e-68  Score=517.29  Aligned_cols=304  Identities=41%  Similarity=0.706  Sum_probs=287.1

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (448)
T TIGR01780         1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-   77 (448)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  89999999999999999999999999999999999999999998 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCCh
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~  199 (349)
                      .|+..+++.++|++....+..+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (448)
T TIGR01780        78 GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP  157 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence            6999999999999987776655443322 233446778999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE
Q 018922          200 LIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI  278 (349)
Q Consensus       200 ~t~~~l~~~l~~aglP~gvv~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV  278 (349)
                      +++..++++|.++|+|+|++|+++|+ +.++++.|+.||+++.|.||||+.+|+.|++.++. ++||+++|+|||||+||
T Consensus       158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV  236 (448)
T TIGR01780       158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV  236 (448)
T ss_pred             HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence            99999999999999999999999996 67889999999999999999999999999999987 89999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus       237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~  306 (448)
T TIGR01780       237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINE  306 (448)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999975

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9.9e-68  Score=536.56  Aligned_cols=322  Identities=25%  Similarity=0.344  Sum_probs=288.4

Q ss_pred             cccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHH
Q 018922           18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLI   96 (349)
Q Consensus        18 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l   96 (349)
                      ||..+++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| ++  .|+++|..+|+++|++++++|
T Consensus         1 ~~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l   76 (675)
T PRK11563          1 MMQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYL   76 (675)
T ss_pred             CCccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHH
Confidence            4566789999999976 45679999999999999999987 6999999999998 68  899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhc--------CceeeccC-C-ccceEEeecc-eeEEE
Q 018922           97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMSR-A-LQGYTLREPI-GVVGH  165 (349)
Q Consensus        97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~-~-~~~~~~~~P~-GVv~~  165 (349)
                      ++++++|++ +++|+|||+.+++ .|+..+++.++||+..+....        ++..+... . ...++.++|+ |||++
T Consensus        77 ~~~~~ela~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~  154 (675)
T PRK11563         77 LERKEELYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVH  154 (675)
T ss_pred             HHhHHHHHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEE
Confidence            999999999 5899999999988 599999999999998875542        22222111 1 2246788997 99999


Q ss_pred             EcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCCCEEEE
Q 018922          166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSF  244 (349)
Q Consensus       166 i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~ag-lP~gvv~~v~g~~~~~~~~l~~~~~v~~v~f  244 (349)
                      |+|||||+...+++++|||++||+||+|||+.+|+++..|++++.++| +|+|++|+++|++.   ..+..++.++.|.|
T Consensus       155 I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~F  231 (675)
T PRK11563        155 INAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTF  231 (675)
T ss_pred             ECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEE
Confidence            999999999999999999999999999999999999999999999999 99999999998532   33334478999999


Q ss_pred             eCChHHHHHHHHHHh-hCCCcceEEeCCCCCceeEcCCCC-----HHHHHHHHHHHHhhhcCCCcccCceEEEecccHHH
Q 018922          245 TGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYVQEGIYDE  318 (349)
Q Consensus       245 tGs~~~g~~i~~~~a-~~~~~~~~le~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~  318 (349)
                      |||+++|+.|.+.++ ..+++|+++|+|||||+||++|||     +|.|++.+++++|.|+||.|++++|||||+++||+
T Consensus       232 TGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~  311 (675)
T PRK11563        232 TGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDA  311 (675)
T ss_pred             ECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHH
Confidence            999999999998632 238999999999999999999995     99999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       319 f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+++|+++++++++|+|+++++++|||+++
T Consensus       312 f~~~l~~~~~~l~vG~p~d~~t~~GPli~~  341 (675)
T PRK11563        312 VIEALRARLAKVVVGDPRLEGVRMGALASL  341 (675)
T ss_pred             HHHHHHHHHhcCccCCCCCCCCcccCCcCH
Confidence            999999999999999999999999999985

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=8.6e-68  Score=517.97  Aligned_cols=306  Identities=37%  Similarity=0.629  Sum_probs=288.6

Q ss_pred             EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 018922           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (349)
Q Consensus        39 ~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  118 (349)
                      ++++||+||+++++++.++.+|+++++++|++|++  .|+++|..+|.++|+++++.|++++++|++++++|+|||+.++
T Consensus         1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (456)
T cd07145           1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS   78 (456)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            36789999999999999999999999999999999  8999999999999999999999999999999999999999999


Q ss_pred             hhCcHHHHHHHHHHHHHhhhhhcCceeeccC-----CccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEe
Q 018922          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMSR-----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (349)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlk  193 (349)
                      + .|+..+++.++++++....+.++..+.+.     +...+++++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K  157 (456)
T cd07145          79 R-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK  157 (456)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence            8 59999999999999877665554332221     23456789999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCC
Q 018922          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (349)
Q Consensus       194 ps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~  273 (349)
                      ||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.+++ +++|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~  236 (456)
T cd07145         158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS  236 (456)
T ss_pred             CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence            9999999999999999999999999999999778889999999999999999999999999999987 899999999999


Q ss_pred             CceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       274 ~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  311 (456)
T cd07145         237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISP  311 (456)
T ss_pred             CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999974

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=1.5e-67  Score=515.16  Aligned_cols=305  Identities=50%  Similarity=0.815  Sum_probs=287.0

Q ss_pred             ecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 018922           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (349)
Q Consensus        42 ~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  121 (349)
                      +||+|++++++++.++.+|+++++++|++||+++.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++ .
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~   80 (454)
T cd07118           2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G   80 (454)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence            589999999999999999999999999999984459999999999999999999999999999999999999999997 6


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          122 DIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      |+..+++.++|++...+.+.+...+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~  160 (454)
T cd07118          81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG  160 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence            99999999999998776665543321 22334578899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      ++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++. +++|+++|+|||||+||++
T Consensus       161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~  239 (454)
T cd07118         161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA  239 (454)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence            999999999999999999999999777789999999999999999999999999999988 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~  307 (454)
T cd07118         240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINE  307 (454)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999874

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=3.9e-68  Score=521.19  Aligned_cols=314  Identities=50%  Similarity=0.782  Sum_probs=297.1

Q ss_pred             eeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 018922           30 FVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL  109 (349)
Q Consensus        30 ~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~  109 (349)
                      |+.+++ ++++++||.||++|++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++
T Consensus         1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~   77 (462)
T PF00171_consen    1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL   77 (462)
T ss_dssp             EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence            777655 6799999999999999999999999999999999999  8999999999999999999999999999999999


Q ss_pred             HhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCe
Q 018922          110 DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT  189 (349)
Q Consensus       110 e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~  189 (349)
                      |+|||+.+++. |+..+++.++|+++..+.+.++..+.+.+...++.++|+|||++|+|||||+...++++++||++||+
T Consensus        78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~  156 (462)
T PF00171_consen   78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT  156 (462)
T ss_dssp             HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred             ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence            99999999995 99999999999999998877766565566778999999999999999999999999999999999999


Q ss_pred             EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEe
Q 018922          190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE  269 (349)
Q Consensus       190 vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le  269 (349)
                      ||+|||+.+|.++..++++|.++|+|+|++|+++|++++++..|+.||+++.|.||||+++|+.|.+.++. +++|+++|
T Consensus       157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le  235 (462)
T PF00171_consen  157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE  235 (462)
T ss_dssp             EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred             ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence            99999999999999999999999999999999999889999999999999999999999999999999886 88999999


Q ss_pred             CCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          270 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       270 ~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~  314 (462)
T PF00171_consen  236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISK  314 (462)
T ss_dssp             ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSH
T ss_pred             ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999974

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=2.9e-67  Score=514.22  Aligned_cols=312  Identities=53%  Similarity=0.848  Sum_probs=292.4

Q ss_pred             CeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 018922           37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS  116 (349)
Q Consensus        37 ~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  116 (349)
                      .+++++||+||+++++++.++.+|+++++++|++||+.+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.
T Consensus         2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~   81 (462)
T cd07112           2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS   81 (462)
T ss_pred             CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence            36889999999999999999999999999999999973359999999999999999999999999999999999999999


Q ss_pred             hhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCC
Q 018922          117 WAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE  196 (349)
Q Consensus       117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~  196 (349)
                      ++...|+..+++.++|++...+...+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~  161 (462)
T cd07112          82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE  161 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence            98645999999999999998877665543333344567899999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCce
Q 018922          197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL  276 (349)
Q Consensus       197 ~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~  276 (349)
                      .+|.++..++++|.++|+|+|++|+++|++.++++.|+.|++++.|.||||+++|+.|++.++..++||+++|+|||||+
T Consensus       162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~  241 (462)
T cd07112         162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN  241 (462)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence            99999999999999999999999999997778999999999999999999999999999998844789999999999999


Q ss_pred             eEcCCC-CHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          277 LIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       277 iV~~da-d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||++|+ |+|.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus       242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  314 (462)
T cd07112         242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSE  314 (462)
T ss_pred             EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCH
Confidence            999999 999999999999999999999999999999999999999999999999999999999999999975

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=3.1e-67  Score=513.98  Aligned_cols=304  Identities=48%  Similarity=0.763  Sum_probs=286.8

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||+++++++.++.+|+++++++|++||+  .|+++|.++|.++|+++++.|.+++++|++++++|+|||..++. 
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (456)
T cd07110           1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  89999999999999999999999999999999999999999987 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcC---ceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCC
Q 018922          121 GDIPGAANTLRYYAGAADKIHG---EVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE  196 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~  196 (349)
                      .|+..+++.+++++...+.+..   ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~  157 (456)
T cd07110          78 WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence            5999999999999988876642   112211 234567889999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCce
Q 018922          197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL  276 (349)
Q Consensus       197 ~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~  276 (349)
                      .+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.+++ +++|+++|+|||||+
T Consensus       158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~  236 (456)
T cd07110         158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI  236 (456)
T ss_pred             cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence            9999999999999999999999999999777789999999999999999999999999999987 899999999999999


Q ss_pred             eEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       277 iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~  308 (456)
T cd07110         237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQ  308 (456)
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999974

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=2.7e-67  Score=514.16  Aligned_cols=306  Identities=38%  Similarity=0.639  Sum_probs=289.9

Q ss_pred             EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 018922           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (349)
Q Consensus        39 ~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  118 (349)
                      ++++||+||+++++++.++.+|+++++++|++|++  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++
T Consensus         1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   78 (451)
T cd07150           1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA   78 (451)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence            35789999999999999999999999999999999  8999999999999999999999999999999999999999998


Q ss_pred             hhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCC
Q 018922          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (349)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~  197 (349)
                      . .|+..+++.+++++...+...+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~  157 (451)
T cd07150          79 W-FETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE  157 (451)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence            7 5999999999999998877665544332 3345678899999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (349)
Q Consensus       198 ~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i  277 (349)
                      +|.++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus       158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i  236 (451)
T cd07150         158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI  236 (451)
T ss_pred             CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence            999999999999999999999999999777889999999999999999999999999999988 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  307 (451)
T cd07150         237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISP  307 (451)
T ss_pred             ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999874

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=8.6e-67  Score=513.11  Aligned_cols=320  Identities=34%  Similarity=0.486  Sum_probs=300.0

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCC-CHHHHHHHHHHHHHHHHHhH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF-SGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~-~~~~R~~~L~~~a~~l~~~~  100 (349)
                      +++||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++|++  .|+++ +.++|.++|+++++.|.+++
T Consensus         2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~   78 (473)
T cd07082           2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK   78 (473)
T ss_pred             CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence            4679999999864 67899999999999999999999999999999999999  89998 99999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHh
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTM  175 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~  175 (349)
                      ++|++++++|+|||..++. .|+..+++.++++++....+.+...+..     .+...+++++|+|||++|+|||||+..
T Consensus        79 ~el~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~  157 (473)
T cd07082          79 EEVANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL  157 (473)
T ss_pred             HHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence            9999999999999999987 5999999999999988877655433221     233457889999999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      .++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.++++.|..|++++.|+||||+++|+.|.
T Consensus       158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~  237 (473)
T cd07082         158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK  237 (473)
T ss_pred             HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999997777899999999999999999999999999


Q ss_pred             HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +.++   ++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus       238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~  314 (473)
T cd07082         238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP  314 (473)
T ss_pred             HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence            8874   6899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +++++++||++++
T Consensus       315 ~~~~~~~gp~i~~  327 (473)
T cd07082         315 WDNGVDITPLIDP  327 (473)
T ss_pred             CCCCCCcCCCCCH
Confidence            9999999999974

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=5.5e-67  Score=511.36  Aligned_cols=303  Identities=32%  Similarity=0.497  Sum_probs=283.7

Q ss_pred             EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 018922           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (349)
Q Consensus        40 ~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  118 (349)
                      +++||+||+++++++.++.+|+++++++|++||+  . |+.+|.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus         2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a   79 (455)
T cd07148           2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA   79 (455)
T ss_pred             CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            5789999999999999999999999999999998  6 567999999999999999999999999999999999999998


Q ss_pred             hhCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEe
Q 018922          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (349)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlk  193 (349)
                      . .|+..+++.++++++.+....+...+..     .+...+++++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        80 ~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK  158 (455)
T cd07148          80 K-VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK  158 (455)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence            8 5999999999999998877655433321     233457889999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCC
Q 018922          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (349)
Q Consensus       194 ps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~  273 (349)
                      ||+.+|.++..++++|.++|+|+|++|+++|+ .+.++.|+.||+++.|.||||+++|+.|++.++.  .+|+++|+|||
T Consensus       159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~  235 (455)
T cd07148         159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGA  235 (455)
T ss_pred             CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCC
Confidence            99999999999999999999999999999984 4679999999999999999999999999999875  48999999999


Q ss_pred             CceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       274 ~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  310 (455)
T cd07148         236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRP  310 (455)
T ss_pred             CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999974

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=5.9e-67  Score=511.71  Aligned_cols=305  Identities=38%  Similarity=0.565  Sum_probs=287.5

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  119 (349)
                      ++||+||+++++++.++.+|+++++++|++|++  .|+ ++|..+|.++|++++++|++++++|++++++|+|||+.++.
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~   78 (459)
T cd07089           1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR   78 (459)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence            479999999999999999999999999999999  899 99999999999999999999999999999999999998776


Q ss_pred             hCcHHHHHHHHHHHHHhhhhhcCcee-ecc----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEec
Q 018922          120 MGDIPGAANTLRYYAGAADKIHGEVL-KMS----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP  194 (349)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkp  194 (349)
                      ..|+..+++.++|+++...+..++.. +..    .+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp  158 (459)
T cd07089          79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP  158 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence            56999999999999998877655432 211    2345678999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCC
Q 018922          195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS  274 (349)
Q Consensus       195 s~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~  274 (349)
                      |+.+|.++..++++|.++|+|+|++|+++|++++++..|+.||+++.|.||||+.+|+.|++.++. ++||+++|+||||
T Consensus       159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n  237 (459)
T cd07089         159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS  237 (459)
T ss_pred             CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence            999999999999999999999999999999777789999999999999999999999999999987 8999999999999


Q ss_pred             ceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       275 ~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+||++|||+|.|++.+++++|.|+||.|+++++||||++++++|+++|.++++++++|+|+++++++||++++
T Consensus       238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~  311 (459)
T cd07089         238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISA  311 (459)
T ss_pred             eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999974

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=5.2e-67  Score=512.23  Aligned_cols=303  Identities=44%  Similarity=0.697  Sum_probs=286.5

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||.||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. 
T Consensus         1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   77 (456)
T cd07107           1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-   77 (456)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence            479999999999999999999999999999999  89999999999999999999999999999999999999999987 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      .|+..+++.++|+++....+.+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~  157 (456)
T cd07107          78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL  157 (456)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence            69999999999999877766665444433445678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      ++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|++.++. +++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~  235 (456)
T cd07107         158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP  235 (456)
T ss_pred             HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence            999999999995 99999999999777789999999999999999999999999999887 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHH-hhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          281 DVDVNTAADMALLGI-LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       281 dad~~~a~~~i~~~~-~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus       236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~  304 (456)
T cd07107         236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSR  304 (456)
T ss_pred             CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCH
Confidence            999999999999995 99999999999999999999999999999999999999999999999999874

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=8e-67  Score=510.84  Aligned_cols=303  Identities=50%  Similarity=0.779  Sum_probs=286.1

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP-RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  119 (349)
                      ++||+||++|++++.++.+|+++++++|++|++  .|. .+|.++|.++|+++++.|.+++++|++++++|+|||+.+++
T Consensus         1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~   78 (454)
T cd07109           1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR   78 (454)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence            479999999999999999999999999999999  776 99999999999999999999999999999999999999988


Q ss_pred             hCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCCh
Q 018922          120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (349)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~  199 (349)
                       .|+..+++.++|+++..++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        79 -~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p  157 (454)
T cd07109          79 -ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP  157 (454)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence             6999999999999988777665544433344568899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      .++..++++|.++|+|+|++|+++|.+.+.++.|+.||+++.|.||||+.+|+.|.+.++. ++||+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~  236 (454)
T cd07109         158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF  236 (454)
T ss_pred             HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence            9999999999999999999999999777889999999999999999999999999999887 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       280 ~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++ .+++||++++
T Consensus       237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~  304 (454)
T cd07109         237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISA  304 (454)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCH
Confidence            9999999999999999999999999999999999999999999999999999999986 6899999974

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=7.3e-67  Score=510.98  Aligned_cols=304  Identities=53%  Similarity=0.847  Sum_probs=288.7

Q ss_pred             ecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 018922           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (349)
Q Consensus        42 ~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  121 (349)
                      +||+||+++++++.++.+|+++++++|++|++  .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...
T Consensus         2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~   79 (453)
T cd07115           2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL   79 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            59999999999999999999999999999999  8999999999999999999999999999999999999999998755


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHH
Q 018922          122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI  201 (349)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t  201 (349)
                      |+..+++.+++++.+.+...+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus        80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~  159 (453)
T cd07115          80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS  159 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence            99999999999998877766554443334456789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCC
Q 018922          202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD  281 (349)
Q Consensus       202 ~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~d  281 (349)
                      +..+.++|.++|+|+|++++++|++.++++.|+.||+++.|+||||+++|+.|.+.++. ++||+++|+|||||+||++|
T Consensus       160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~d  238 (453)
T cd07115         160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFAD  238 (453)
T ss_pred             HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCC
Confidence            99999999999999999999999777889999999999999999999999999999987 89999999999999999999


Q ss_pred             CCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       282 ad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  305 (453)
T cd07115         239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQ  305 (453)
T ss_pred             CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999975

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=7.4e-67  Score=511.48  Aligned_cols=303  Identities=45%  Similarity=0.717  Sum_probs=287.5

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||+++++++.++.+|++++++.|++|++  .|+.++..+|.++|+++++.|.+++++|++++++|+|||+.++. 
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-   77 (457)
T cd07090           1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-   77 (457)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  89999999999999999999999999999999999999999987 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      .|+..+++.++|+++..+.+.++..+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~  157 (457)
T cd07090          78 VDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL  157 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence            69999999999999888776655444333455678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      ++..+.++|.++|+|+|++|++++++ ++++.|+.||+++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++
T Consensus       158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~  235 (457)
T cd07090         158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD  235 (457)
T ss_pred             HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence            99999999999999999999999854 588999999999999999999999999999988 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++.+++|+|+++++++||++++
T Consensus       236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  303 (457)
T cd07090         236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISE  303 (457)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999874

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=2.2e-66  Score=508.18  Aligned_cols=306  Identities=48%  Similarity=0.788  Sum_probs=287.8

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||++|++++.++.+|+++++++|++|++++.|+.+|.++|.++|++++++|.+++++|++++++|+|||+.+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-   79 (457)
T cd07114           1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR-   79 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence            4799999999999999999999999999999973359999999999999999999999999999999999999999988 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCCh
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~  199 (349)
                      .|+..+++.+++++...+.+.+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        80 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p  159 (457)
T cd07114          80 AQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP  159 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence            6999999999999987776655433322 334567889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      .++..++++|.++|+|+|++|++++++.++++.|+.|++++.|.||||+++|+.|.+.+++ ++||+++|+|||||+||+
T Consensus       160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~  238 (457)
T cd07114         160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF  238 (457)
T ss_pred             HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence            9999999999999999999999999777789999999999999999999999999999987 889999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       280 ~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||++.|++.+++++|.++||.|+++++||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus       239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  307 (457)
T cd07114         239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATE  307 (457)
T ss_pred             CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999974

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.8e-66  Score=514.71  Aligned_cols=320  Identities=36%  Similarity=0.544  Sum_probs=296.1

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      ...+.|.|.|-.  ++++++++||+||+++++++.++.+|+++++++|++|++  .|+++|..+|.++|+++++.|.+++
T Consensus        18 ~~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~   93 (524)
T PRK09407         18 RLRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENR   93 (524)
T ss_pred             HHHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhH
Confidence            345667777644  567899999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-c--cCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M--SRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++|++++++|+|||+.++. .|+..+++.++|++..+....+.... .  ......+++++|+|||++|+|||||+...+
T Consensus        94 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~  172 (524)
T PRK09407         94 EELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAV  172 (524)
T ss_pred             HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHH
Confidence            9999999999999999987 69999999999999887665443211 1  112346788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.++++.|+.|  ++.|+||||+++|+.|.+.
T Consensus       173 ~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~  250 (524)
T PRK09407        173 SDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQ  250 (524)
T ss_pred             HHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999777889999986  7899999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus       251 aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~  329 (524)
T PRK09407        251 AGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYD  329 (524)
T ss_pred             HHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence            887 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       330 ~~~~~Gpli~~  340 (524)
T PRK09407        330 YSADMGSLISE  340 (524)
T ss_pred             cCCccCCCCCH
Confidence            99999999974

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=3.1e-66  Score=540.09  Aligned_cols=318  Identities=34%  Similarity=0.478  Sum_probs=297.7

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCc-eeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGE-AIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~-~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      .+.+|||      +++.++++||+|++ +|++++.++.+|+++|+++|++||+  .|+++|..+|+++|+++++.|++++
T Consensus       553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~  624 (1038)
T PRK11904        553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANR  624 (1038)
T ss_pred             ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence            3456777      34678999999988 9999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCce--eeccCCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  178 (349)
                      ++|+.++++|+|||+.++. .|+.+++++++||+..+....+..  .+...+..+.++++|+|||++|+|||||+...++
T Consensus       625 ~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~  703 (1038)
T PRK11904        625 AELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG  703 (1038)
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence            9999999999999999987 699999999999999987765432  2333456678899999999999999999999999


Q ss_pred             HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (349)
Q Consensus       179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~  258 (349)
                      ++++||++||+||+|||+++|+++..++++|.++|+|+|++|+++|++.++++.|+.||+|+.|.||||+++|+.|.+.+
T Consensus       704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~  783 (1038)
T PRK11904        704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL  783 (1038)
T ss_pred             HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999998


Q ss_pred             hhC--CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          259 ATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       259 a~~--~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      +.+  ..+|+++|+|||||+||++|||+|+|++.+++|+|.++||.|+++++||||+++||+|+++|.++++++++|+|+
T Consensus       784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~  863 (1038)
T PRK11904        784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR  863 (1038)
T ss_pred             hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence            863  268999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      ++++++||||++
T Consensus       864 d~~t~~GPvI~~  875 (1038)
T PRK11904        864 LLSTDVGPVIDA  875 (1038)
T ss_pred             cccCCccCCCCH
Confidence            999999999985

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=6.9e-66  Score=502.95  Aligned_cols=310  Identities=22%  Similarity=0.280  Sum_probs=282.4

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW--PRFSGAER----RGIMLKFADLIE   97 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w--~~~~~~~R----~~~L~~~a~~l~   97 (349)
                      +||||+|+.+  +++++++||+||+++++++.++.+|+++|+++|++||+  .|  +.++..+|    .++|.++++.|+
T Consensus         1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~   76 (489)
T cd07126           1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR   76 (489)
T ss_pred             CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence            4799999874  46799999999999999999999999999999999999  77  66789999    899999999999


Q ss_pred             Hh--HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCcee--ec-cCCccceEEeecceeEEEEcCCCcc
Q 018922           98 EH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KM-SRALQGYTLREPIGVVGHIIPWNFP  172 (349)
Q Consensus        98 ~~--~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P  172 (349)
                      ++  .++|++++++|+|||+.+++ .|+..+++.++||++...+..+...  +. ..+...+++++|+|||++|+|||||
T Consensus        77 ~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP  155 (489)
T cd07126          77 KPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP  155 (489)
T ss_pred             cCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence            98  59999999999999999987 6999999999999988766554432  21 1234568899999999999999999


Q ss_pred             HHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHH
Q 018922          173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR  252 (349)
Q Consensus       173 ~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~  252 (349)
                      +...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|.+.+ +..++.|++++.|+||||+++|+
T Consensus       156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr  234 (489)
T cd07126         156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE  234 (489)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence            99999999999999999999999999999999999999999999999999996655 55688899999999999999999


Q ss_pred             HHHHHHhhCCCcceEEeCCCCCceeEcCCC-CHHHHHHHHHHHHhhhcCCCcccCceEEEeccc-HHHHHHHHHHHhhcc
Q 018922          253 QVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAW  330 (349)
Q Consensus       253 ~i~~~~a~~~~~~~~le~gG~~~~iV~~da-d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~-~~~f~~~l~~~~~~l  330 (349)
                      .|...++    +++++|+|||||+||++|| |+|.|++.++.++|.|+||.|++++|||||+++ +|+|+++|.+.++++
T Consensus       235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~  310 (489)
T cd07126         235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR  310 (489)
T ss_pred             HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence            9988764    4799999999999999999 999999999999999999999999999999994 689999999999999


Q ss_pred             cccCCCCCCCcccccCCC
Q 018922          331 VVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       331 ~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|+     +++|||+++
T Consensus       311 ~~g~-----~~~Gpli~~  323 (489)
T cd07126         311 KLED-----LTIGPVLTW  323 (489)
T ss_pred             ccCC-----CcCCCCcCH
Confidence            9885     589999874

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=8.4e-66  Score=503.41  Aligned_cols=301  Identities=36%  Similarity=0.565  Sum_probs=282.3

Q ss_pred             ecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 018922           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (349)
Q Consensus        42 ~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  121 (349)
                      .||+||+++++++.++.+|+++++++|++|++  .|++++.++|.++|++++++|++++++|++++++|+|||+.++. .
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~   77 (454)
T cd07101           1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-E   77 (454)
T ss_pred             CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-H
Confidence            38999999999999999999999999999999  89999999999999999999999999999999999999999987 6


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCcee-ec--cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCC
Q 018922          122 DIPGAANTLRYYAGAADKIHGEVL-KM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT  198 (349)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~  198 (349)
                      |+..+++.++|++..+........ +.  ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~  157 (454)
T cd07101          78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT  157 (454)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence            999999999999988766554322 11  112345788999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE
Q 018922          199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI  278 (349)
Q Consensus       199 ~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV  278 (349)
                      |.++..+.+++.++|+|+|++|+++|++.+.++.|++|  ++.|.||||+++|+.|++.++. +++|+++|+|||||+||
T Consensus       158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV  234 (454)
T cd07101         158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV  234 (454)
T ss_pred             hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence            99999999999999999999999999888889999987  5789999999999999999987 89999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus       235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~  304 (454)
T cd07101         235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQ  304 (454)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999974

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=1.4e-65  Score=500.99  Aligned_cols=300  Identities=44%  Similarity=0.658  Sum_probs=281.2

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||+++++++.++.+|+++++++|++||+  .|++++.++|.++|+++++.|.+++++|++++++|+|||..++. 
T Consensus         1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-   77 (446)
T cd07106           1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-   77 (446)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  89999999999999999999999999999999999999999987 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      .|+..+++.++++++...  .+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ~ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~  155 (446)
T cd07106          78 FEVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL  155 (446)
T ss_pred             HHHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence            599999999999987753  222222222345688899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      ++..++++|.++ +|+|++|+++| +.++++.|++|++++.|+||||+++|+.|.+.++. +++|+++|+|||||+||++
T Consensus       156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~  232 (446)
T cd07106         156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP  232 (446)
T ss_pred             HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence            999999999995 99999999998 45688999999999999999999999999999887 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  300 (446)
T cd07106         233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNK  300 (446)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999974

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=1.8e-65  Score=501.48  Aligned_cols=302  Identities=35%  Similarity=0.555  Sum_probs=285.2

Q ss_pred             ecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 018922           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (349)
Q Consensus        42 ~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  121 (349)
                      +||+||+++++++.++.+|+++++++|++|++  .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .
T Consensus         1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~   77 (452)
T cd07102           1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-G   77 (452)
T ss_pred             CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-H
Confidence            58999999999999999999999999999999  89999999999999999999999999999999999999999987 6


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCce-eeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          122 DIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      |+..+++.+++++....+..+.. .+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~  157 (452)
T cd07102          78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL  157 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence            99999999999998877654432 22223445678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      ++..|.++|.++|+|+|++|++++++ +.+..|+.||+++.|.||||+++|+.|++.++. +++|+.+|+|||||+||++
T Consensus       158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~  235 (452)
T cd07102         158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP  235 (452)
T ss_pred             HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence            99999999999999999999999966 789999999999999999999999999999887 8899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||+|.|++.+++++|+|+||.|++++|||||++++++|+++|+++++++++|+|+++++++|||+++
T Consensus       236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~  303 (452)
T cd07102         236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSA  303 (452)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999874

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=1.8e-65  Score=501.35  Aligned_cols=303  Identities=36%  Similarity=0.606  Sum_probs=286.9

Q ss_pred             EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 018922           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (349)
Q Consensus        40 ~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  119 (349)
                      +++||+||+++++++.++.+|+++++++|++|++  .|+++|.++|.++|.++++.|.+++++|++++++|+|||..+++
T Consensus         2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~   79 (453)
T cd07094           2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR   79 (453)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence            5789999999999999999999999999999999  89999999999999999999999999999999999999999998


Q ss_pred             hCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEec
Q 018922          120 MGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP  194 (349)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkp  194 (349)
                       .|+..+++.++++++...+..++..+..     .+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus        80 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp  158 (453)
T cd07094          80 -VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP  158 (453)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence             5999999999999998877765544322     2344578899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCC
Q 018922          195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS  274 (349)
Q Consensus       195 s~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~  274 (349)
                      |+.+|+++..++++|.++|+|+|++++++|++.++++.|+.||+++.|.||||+++|+.|.+.+   +++|+++|+||||
T Consensus       159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~  235 (453)
T cd07094         159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA  235 (453)
T ss_pred             CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence            9999999999999999999999999999997778899999999999999999999999999887   5799999999999


Q ss_pred             ceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       275 ~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+||++|||+|.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus       236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~  309 (453)
T cd07094         236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISE  309 (453)
T ss_pred             ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999974

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=2.8e-65  Score=500.30  Aligned_cols=303  Identities=43%  Similarity=0.735  Sum_probs=285.1

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch-hhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH-SWAK  119 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~  119 (349)
                      ++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||+ .+++
T Consensus         1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~   78 (457)
T cd07108           1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR   78 (457)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence            479999999999999999999999999999999  8999999999999999999999999999999999999997 5776


Q ss_pred             hCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCCh
Q 018922          120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (349)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~  199 (349)
                       .|+..+++.+++++.....+.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p  157 (457)
T cd07108          79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP  157 (457)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence             6999999999999988776665554433334457889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      .++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~  235 (457)
T cd07108         158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF  235 (457)
T ss_pred             HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence            9999999999986 99999999999777889999999999999999999999999999987 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHH-HhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          280 DDVDVNTAADMALLG-ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       280 ~dad~~~a~~~i~~~-~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~  305 (457)
T cd07108         236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISE  305 (457)
T ss_pred             CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCH
Confidence            999999999999999 599999999999999999999999999999999999999999999999999975

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=3.1e-65  Score=499.52  Aligned_cols=304  Identities=45%  Similarity=0.702  Sum_probs=284.8

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||++|++++.++.+|+++++++|++|++  .|+.++..+|.++|+++++.|.+++++|++++++|+|||..++..
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~   78 (450)
T cd07092           1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD   78 (450)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence            479999999999999999999999999999999  899999999999999999999999999999999999999977654


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCCh
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~  199 (349)
                      .|+..+++.+++++...+.+.+...+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  158 (450)
T cd07092          79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP  158 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence            699999999999998776655433211 1233457889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      .++..+.++|.+ |+|+|++|+++|++.++++.|+.|++++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||+
T Consensus       159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~  236 (450)
T cd07092         159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF  236 (450)
T ss_pred             HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence            999999999999 999999999999777789999999999999999999999999999988 889999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       280 ~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||+|.|++.+++++|.|+||.|+++++||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus       237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  305 (450)
T cd07092         237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSA  305 (450)
T ss_pred             CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999974

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=2.5e-65  Score=500.21  Aligned_cols=303  Identities=37%  Similarity=0.610  Sum_probs=282.9

Q ss_pred             EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 018922           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (349)
Q Consensus        39 ~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  118 (349)
                      ++++||+||+++++++.++.+|+++++++|++|++  .|++++..+|.++|+++++.|.+++++|++++++|+|||+.++
T Consensus         1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (452)
T cd07147           1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA   78 (452)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence            36789999999999999999999999999999999  8999999999999999999999999999999999999999998


Q ss_pred             hhCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEe
Q 018922          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (349)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlk  193 (349)
                      + .|+..+++.+++++....+..++..+..     .+...+++++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK  157 (452)
T cd07147          79 R-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK  157 (452)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence            8 5999999999999988766544432211     233456789999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCC
Q 018922          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (349)
Q Consensus       194 ps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~  273 (349)
                      ||+.+|.++..++++|.++|+|+|++|+++++ .+.+..|+.||+++.|.||||+++|+.|.+.++.   +|+++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~  233 (452)
T cd07147         158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN  233 (452)
T ss_pred             CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence            99999999999999999999999999999994 4678999999999999999999999999998753   7999999999


Q ss_pred             CceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       274 ~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|||+++++++|||+++
T Consensus       234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~  308 (452)
T cd07147         234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISE  308 (452)
T ss_pred             CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999874

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=4.4e-65  Score=498.71  Aligned_cols=304  Identities=44%  Similarity=0.731  Sum_probs=287.9

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      ++||+||++|++++.++.+|+++++++|++|++  .|+++|.++|.++|+++++.|.+++++|++++++|+|||..+++ 
T Consensus         1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-   77 (451)
T cd07103           1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-   77 (451)
T ss_pred             CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence            479999999999999999999999999999999  89999999999999999999999999999999999999999988 


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCCh
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP  199 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~  199 (349)
                      .|+..+++.++|++...+...+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus        78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~  157 (451)
T cd07103          78 GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP  157 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence            6999999999999988776655443322 244567889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      .++..++++|.++|+|+|++|++++++.++++.|+.|++++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||+
T Consensus       158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~  236 (451)
T cd07103         158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF  236 (451)
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence            9999999999999999999999999777788999999999999999999999999999988 899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       280 ~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~  305 (451)
T cd07103         237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINE  305 (451)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999974

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.1e-65  Score=538.52  Aligned_cols=307  Identities=31%  Similarity=0.462  Sum_probs=288.3

Q ss_pred             eeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV  102 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~  102 (349)
                      ..|+|+.   ..+..++++||+| +++|++++.++.+|+++|+++|++|++  .|+++|..+|+++|++++++|++++++
T Consensus       649 p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~e  723 (1318)
T PRK11809        649 PMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQT  723 (1318)
T ss_pred             CcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence            3456632   2456789999998 789999999999999999999999999  899999999999999999999999999


Q ss_pred             HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      |+.++++|+|||+.++. .|+.+++++++||+..+....           ....++|+|||++|+|||||+.++++++++
T Consensus       724 L~~l~~~EaGKt~~~A~-~EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaa  791 (1318)
T PRK11809        724 LMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAA  791 (1318)
T ss_pred             HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECCCccHHHHHHHHHHH
Confidence            99999999999999987 699999999999998765421           124689999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC
Q 018922          183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN  262 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~  262 (349)
                      ||++||+||+|||+++|+++..++++|.++|+|+|++|+++|++.+++..|+.||+|++|+||||+++|+.|.+.+++ +
T Consensus       792 ALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~-~  870 (1318)
T PRK11809        792 ALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAG-R  870 (1318)
T ss_pred             HHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhh-h
Confidence            999999999999999999999999999999999999999999888899999999999999999999999999999887 4


Q ss_pred             C------cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          263 L------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       263 ~------~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      +      +|+++|+||||++||++|||+|+|++.++.|+|.++||.|++++++|||++++|+|+++|+++++++++|||+
T Consensus       871 l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~  950 (1318)
T PRK11809        871 LDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPD  950 (1318)
T ss_pred             cccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcc
Confidence            4      7999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      +.++++||||++
T Consensus       951 ~~~tdvGPvId~  962 (1318)
T PRK11809        951 RLSTDIGPVIDA  962 (1318)
T ss_pred             cccCCcCCCCCH
Confidence            999999999985

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=6.4e-65  Score=498.81  Aligned_cols=303  Identities=32%  Similarity=0.504  Sum_probs=280.2

Q ss_pred             ecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 018922           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (349)
Q Consensus        42 ~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  121 (349)
                      +||+||+++++++.++.+|+++++++|++|++  .|+++|.++|.++|+++++.|.+++++|++++++|+|||+.+++..
T Consensus         1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~   78 (465)
T cd07098           1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG   78 (465)
T ss_pred             CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence            58999999999999999999999999999999  8999999999999999999999999999999999999999998756


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCc-eeecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCC
Q 018922          122 DIPGAANTLRYYAGAADKIHGE-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (349)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~  197 (349)
                      |+..+++.+++++......... ..+..   .....+++++|+||+++|+|||||+...+.++++||++||+||+|||++
T Consensus        79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~  158 (465)
T cd07098          79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ  158 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence            9999999999998776553322 11111   1234577899999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCC
Q 018922          198 TPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (349)
Q Consensus       198 ~~~t~~~l~~~----l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~  273 (349)
                      +|+++..++++    |.++|+|+|++|+++|++ ++++.|+.||+|+.|.||||+++|+.|.+.++. +++|+++|+|||
T Consensus       159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~  236 (465)
T cd07098         159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK  236 (465)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence            99999876554    578999999999999954 789999999999999999999999999999987 899999999999


Q ss_pred             CceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       274 ~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||+||++|||+|.|++.++.++|.++||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~  311 (465)
T cd07098         237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISP  311 (465)
T ss_pred             CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=5.4e-65  Score=496.48  Aligned_cols=297  Identities=38%  Similarity=0.603  Sum_probs=279.3

Q ss_pred             CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHH
Q 018922           47 GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGA  126 (349)
Q Consensus        47 g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~  126 (349)
                      |+++++++.++.+|+++++++|++||+  .|+++|..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+
T Consensus         1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~   77 (443)
T cd07152           1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAA   77 (443)
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHH
Confidence            588999999999999999999999999  89999999999999999999999999999999999999999987 599999


Q ss_pred             HHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHH-HHH
Q 018922          127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYF  205 (349)
Q Consensus       127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~-~~l  205 (349)
                      ++.+++++.......+...+...+...+++++|+|||++|+|||||++..++++++||++||+||+|||+++|.++ ..+
T Consensus        78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l  157 (443)
T cd07152          78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI  157 (443)
T ss_pred             HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence            9999999987655544433333344567899999999999999999999999999999999999999999999996 789


Q ss_pred             HHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHH
Q 018922          206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN  285 (349)
Q Consensus       206 ~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~  285 (349)
                      .++|.++|+|+|++|+++| +.++++.|+.||+++.|+||||+.+|+.|.+.++. ++||+++|+|||||+||++|||+|
T Consensus       158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~  235 (443)
T cd07152         158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD  235 (443)
T ss_pred             HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence            9999999999999999998 56789999999999999999999999999999888 899999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       286 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      .|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus       236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  298 (443)
T cd07152         236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINA  298 (443)
T ss_pred             HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCH
Confidence            999999999999999999999999999999999999999999999999999999999999985

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=5.4e-65  Score=498.44  Aligned_cols=305  Identities=50%  Similarity=0.823  Sum_probs=287.7

Q ss_pred             eecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhh
Q 018922           41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM  120 (349)
Q Consensus        41 ~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~  120 (349)
                      .+||+||+++++++.++.+|+++++++|++|++  .|++++.++|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus         1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~   78 (455)
T cd07093           1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART   78 (455)
T ss_pred             CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            369999999999999999999999999999999  899999999999999999999999999999999999999988865


Q ss_pred             CcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChH
Q 018922          121 GDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL  200 (349)
Q Consensus       121 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~  200 (349)
                      .|+..+++.++++++......+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus        79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~  158 (455)
T cd07093          79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL  158 (455)
T ss_pred             HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence            69999999999999887665444333333455678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      ++..+.++|.++|+|+|++|+++|.+.++++.|+.|++++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus       159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~  237 (455)
T cd07093         159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA  237 (455)
T ss_pred             HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence            999999999999999999999999777889999999999999999999999999999987 8999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.++++++|||+++
T Consensus       238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  305 (455)
T cd07093         238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISK  305 (455)
T ss_pred             CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999875

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=1.2e-64  Score=495.86  Aligned_cols=301  Identities=37%  Similarity=0.568  Sum_probs=282.6

Q ss_pred             ecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC
Q 018922           42 IDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG  121 (349)
Q Consensus        42 ~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~  121 (349)
                      +||+||+++++++.++.+|+++++++|++|++  .|++++.++|.++|+++++.|++++++|++++++|+|||+.++. .
T Consensus         1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~   77 (453)
T cd07099           1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L   77 (453)
T ss_pred             CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-H
Confidence            48999999999999999999999999999999  89999999999999999999999999999999999999999877 6


Q ss_pred             cHHHHHHHHHHHHHhhhhhcCce-eec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCC
Q 018922          122 DIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (349)
Q Consensus       122 ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~  197 (349)
                      |+..+++.++|+++.+.+..+.. .+.   ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~  157 (453)
T cd07099          78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV  157 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence            99999999999998876655432 221   12445678999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (349)
Q Consensus       198 ~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i  277 (349)
                      +|.++..|+++|.++|+|+|++|+++|++ +++..|+.| .++.|+||||+++|+.|.+.++. +++|+++|+|||||+|
T Consensus       158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i  234 (453)
T cd07099         158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI  234 (453)
T ss_pred             chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence            99999999999999999999999999965 688899987 59999999999999999999987 7999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+|+++++|||+++
T Consensus       235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~  305 (453)
T cd07099         235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTA  305 (453)
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999974

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=1.4e-64  Score=493.73  Aligned_cols=300  Identities=38%  Similarity=0.577  Sum_probs=279.9

Q ss_pred             EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 018922           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (349)
Q Consensus        40 ~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  119 (349)
                      +++||+||+++++++.++.+|+++++++|+++     |+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++
T Consensus         2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~-----~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~   76 (451)
T cd07146           2 EVRNPYTGEVVGTVPAGTEEALREALALAASY-----RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR   76 (451)
T ss_pred             CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence            57899999999999999999999999998753     7789999999999999999999999999999999999999997


Q ss_pred             hCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEec
Q 018922          120 MGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP  194 (349)
Q Consensus       120 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkp  194 (349)
                       .|+..+++.++|++.......++..+..     .....+++++|+|||++|+|||||++..++++++||++||+||+||
T Consensus        77 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp  155 (451)
T cd07146          77 -YEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP  155 (451)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence             6999999999999987766554433221     2334578899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCC
Q 018922          195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS  274 (349)
Q Consensus       195 s~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~  274 (349)
                      |+.+|+++..+.++|.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|.+.++   ++++++|+||||
T Consensus       156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~  232 (451)
T cd07146         156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND  232 (451)
T ss_pred             CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence            99999999999999999999999999999977788999999999999999999999999998764   589999999999


Q ss_pred             ceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       275 ~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++|||+++
T Consensus       233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~  306 (451)
T cd07146         233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDE  306 (451)
T ss_pred             eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999975

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=2.2e-64  Score=491.24  Aligned_cols=286  Identities=23%  Similarity=0.327  Sum_probs=263.7

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 018922           56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG  135 (349)
Q Consensus        56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  135 (349)
                      ....|+++++++|++||+  .|++++..+|.++|+++++.|++|+|+|++++++|+|||+.++...|+..+++.++|+++
T Consensus         7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~   84 (484)
T PLN02174          7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK   84 (484)
T ss_pred             cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999  899999999999999999999999999999999999999998875699999999999999


Q ss_pred             hhhhhcCc----eeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHH
Q 018922          136 AADKIHGE----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL  211 (349)
Q Consensus       136 ~~~~~~~~----~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~  211 (349)
                      ..++..+.    ..........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~  164 (484)
T PLN02174         85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ  164 (484)
T ss_pred             HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence            87765542    11111233467899999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHH
Q 018922          212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA  291 (349)
Q Consensus       212 aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i  291 (349)
                       ++|+|++|+++| +.+.+..|+. +.+|.|+||||+++|+.|++.+++ +++|+++|||||||+||++|||+|.|++.+
T Consensus       165 -~lp~gvv~vv~G-~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i  240 (484)
T PLN02174        165 -YLDSSAVRVVEG-AVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI  240 (484)
T ss_pred             -hCCCCEEEEEEC-ChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence             699999999998 4455677776 899999999999999999999987 899999999999999999999999999999


Q ss_pred             HHHHh-hhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          292 LLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       292 ~~~~~-~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++++| .|+||.|++++|||||++++|+|+++|.++++++++|+|++ ++++|||+++
T Consensus       241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~  297 (484)
T PLN02174        241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNS  297 (484)
T ss_pred             HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCH
Confidence            99999 69999999999999999999999999999999999999988 7999999985

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=1.7e-64  Score=496.81  Aligned_cols=300  Identities=20%  Similarity=0.224  Sum_probs=272.7

Q ss_pred             EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh
Q 018922           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK  119 (349)
Q Consensus        40 ~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~  119 (349)
                      .-+||+|++++++++.++.   ++++++|++||+  .|++++..+|.++|++++++|++++++|++++++|+|||+.++.
T Consensus        68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~  142 (551)
T TIGR02288        68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF  142 (551)
T ss_pred             cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence            4569999999999999985   899999999999  89999999999999999999999999999999999999999874


Q ss_pred             h-C---cHHHHHHHHHHHHHhhhhhcCcee---ecc-CC---ccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCC
Q 018922          120 M-G---DIPGAANTLRYYAGAADKIHGEVL---KMS-RA---LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGC  188 (349)
Q Consensus       120 ~-~---ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~---~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN  188 (349)
                      . +   ++.+.++.++|++....++.++..   +.. ..   ....++++|+||+++|+|||||+++.++++++||++||
T Consensus       143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN  222 (551)
T TIGR02288       143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN  222 (551)
T ss_pred             hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence            2 1   778889999999988777665433   211 11   11234789999999999999999999999999999999


Q ss_pred             eEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCC
Q 018922          189 TMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (349)
Q Consensus       189 ~vvlkps~~~~~t~~----~l~~~l~~aglP~gvv~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  263 (349)
                      +||+|||+.+|+++.    .+.++|.++|+|+|++|++++. +.++++.|+.||+|+.|.||||+++|+.|.+.++   .
T Consensus       223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa---~  299 (551)
T TIGR02288       223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR---Q  299 (551)
T ss_pred             eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc---c
Confidence            999999999999665    5779999999999999999985 6789999999999999999999999999998875   3


Q ss_pred             cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecc---------cHHHHHHHHHHHhhcccccC
Q 018922          264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       264 ~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------~~~~f~~~l~~~~~~l~~g~  334 (349)
                      +++++|+|||||+||++|||+|.+++.+++++|.|+||.|++++|||||++         +||+|+++|.++++++ +||
T Consensus       300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd  378 (551)
T TIGR02288       300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD  378 (551)
T ss_pred             CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence            799999999999999999999999999999999999999999999999999         7999999999999999 999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+|+
T Consensus       379 p~~~~~~~Gplis~  392 (551)
T TIGR02288       379 PARATAVLGAIQSP  392 (551)
T ss_pred             cccccccccCcCCH
Confidence            99999999999985

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=7.3e-64  Score=490.48  Aligned_cols=304  Identities=40%  Similarity=0.643  Sum_probs=284.8

Q ss_pred             EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhh
Q 018922           39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA  118 (349)
Q Consensus        39 ~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a  118 (349)
                      ++++||+||+++++++.++.+|+++++++|++|++  .|++++..+|.++|+++++.|.+++++|++++++|+|||..++
T Consensus         1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a   78 (453)
T cd07149           1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA   78 (453)
T ss_pred             CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence            46789999999999999999999999999999999  8999999999999999999999999999999999999999999


Q ss_pred             hhCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEe
Q 018922          119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK  193 (349)
Q Consensus       119 ~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlk  193 (349)
                      . .|+..+++.++++++....+.++..+..     .+...+.+++|+|||++|+|||||+...++++++||++||+||+|
T Consensus        79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K  157 (453)
T cd07149          79 R-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK  157 (453)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence            8 6999999999999987766655433321     122347789999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCC
Q 018922          194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (349)
Q Consensus       194 ps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~  273 (349)
                      ||+.+|.++..+.++|.++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.+   .++++++|+|||
T Consensus       158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a---~~~~~~lelGGk  234 (453)
T cd07149         158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKA---GLKKVTLELGSN  234 (453)
T ss_pred             CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHc---CCCceeeecCCC
Confidence            99999999999999999999999999999997777799999999999999999999999999886   368999999999


Q ss_pred             CceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       274 ~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++.+++|+|+++++++|||+++
T Consensus       235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~  309 (453)
T cd07149         235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISE  309 (453)
T ss_pred             ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=5.4e-64  Score=528.78  Aligned_cols=309  Identities=33%  Similarity=0.501  Sum_probs=289.9

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      +..|+|+...   +..++++||+| +++|++++.++.+|+++|+++|++|++  .|+.+|.++|+++|+++++.|+++++
T Consensus       556 ~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~  630 (1208)
T PRK11905        556 APLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP  630 (1208)
T ss_pred             cceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence            3456665442   45689999999 999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|++++++|+||++.++. .|+.+++++++||+..++...+           ...++|+|||++|+|||||+.+.+++++
T Consensus       631 eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~  698 (1208)
T PRK11905        631 ELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA  698 (1208)
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence            999999999999999987 6999999999999988765431           2457899999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+++|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+++|+.|.+.++.+
T Consensus       699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~  778 (1208)
T PRK11905        699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR  778 (1208)
T ss_pred             HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998888999999999999999999999999999998873


Q ss_pred             --CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          262 --NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       262 --~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                        +.+|+++|+|||||+||++|||+|.|++.+++|+|.++||.|+++++||||++++|+|+++|.++++++++|||++.+
T Consensus       779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~  858 (1208)
T PRK11905        779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS  858 (1208)
T ss_pred             cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence              258999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++||||++
T Consensus       859 t~~GPvId~  867 (1208)
T PRK11905        859 TDVGPVIDA  867 (1208)
T ss_pred             CCccCccCH
Confidence            999999985

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=1.9e-63  Score=482.76  Aligned_cols=285  Identities=34%  Similarity=0.507  Sum_probs=267.1

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhh
Q 018922           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK  139 (349)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~  139 (349)
                      |+++++++|++||+  .|+.+|.++|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++++++....
T Consensus         1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~   77 (431)
T cd07095           1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHE   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  89999999999999999999999999999999999999999998 6999999999999988766


Q ss_pred             hcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 018922          140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL  219 (349)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv  219 (349)
                      ..+.......+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~  157 (431)
T cd07095          78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL  157 (431)
T ss_pred             hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence            65543322234456889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhc
Q 018922          220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK  299 (349)
Q Consensus       220 ~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~  299 (349)
                      |+++| +.+.++.|++||+++.|.||||+++|+.|.+.++.+.++++++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus       158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~  236 (431)
T cd07095         158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA  236 (431)
T ss_pred             eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence            99998 45789999999999999999999999999999876467999999999999999999999999999999999999


Q ss_pred             CCCcccCceEEEecc-cHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          300 GEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       300 GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||.|++++|||||++ ++|+|+++|.++++++++|+|+++++++||++++
T Consensus       237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  286 (431)
T cd07095         237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIA  286 (431)
T ss_pred             CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCH
Confidence            999999999999999 9999999999999999999999999999999874

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=1.8e-63  Score=483.53  Aligned_cols=282  Identities=37%  Similarity=0.563  Sum_probs=264.9

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhh
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  140 (349)
                      +++++++|++||+  .|+.+|..+|.++|.++++.|++++++|++++++|+|||..+++ .|+..+++.++|++...++.
T Consensus         1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~   77 (429)
T cd07100           1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAF   77 (429)
T ss_pred             CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence            4789999999999  89999999999999999999999999999999999999999998 69999999999999888776


Q ss_pred             cCc-eeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 018922          141 HGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVL  219 (349)
Q Consensus       141 ~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv  219 (349)
                      ... ..+.. +...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++
T Consensus        78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv  156 (429)
T cd07100          78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF  156 (429)
T ss_pred             cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence            432 22222 3446788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhc
Q 018922          220 NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK  299 (349)
Q Consensus       220 ~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~  299 (349)
                      |+++|++ +.+..|+.||+++.|.||||+++|+.|.+.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus       157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~  234 (429)
T cd07100         157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA  234 (429)
T ss_pred             EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence            9999954 567899999999999999999999999999987 89999999999999999999999999999999999999


Q ss_pred             CCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       300 GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus       235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  283 (429)
T cd07100         235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARK  283 (429)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCH
Confidence            9999999999999999999999999999999999999999999999985

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=3.9e-62  Score=481.06  Aligned_cols=306  Identities=19%  Similarity=0.214  Sum_probs=277.7

Q ss_pred             CCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 018922           34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK  113 (349)
Q Consensus        34 ~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk  113 (349)
                      .++...+++||+|++++++++.+   |+++++++|++|++  .|++++..+|.++|++++++|.+++++|++++++|+||
T Consensus        62 ~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk  136 (549)
T cd07127          62 ASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQ  136 (549)
T ss_pred             CCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCC
Confidence            35678999999999999999987   99999999999999  89999999999999999999999999999999999999


Q ss_pred             chhhhhhC----cHHHHHHHHHHHHHhhhhhcCceeec---cC----CccceEEeecceeEEEEcCCCccHHhhHHHHHh
Q 018922          114 LHSWAKMG----DIPGAANTLRYYAGAADKIHGEVLKM---SR----ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP  182 (349)
Q Consensus       114 ~~~~a~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~  182 (349)
                      ++.++...    |++++++.++|+.+....+.++....   ..    ......+++|+||+++|+|||||+++.+..+++
T Consensus       137 ~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~  216 (549)
T cd07127         137 AFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFA  216 (549)
T ss_pred             CHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHH
Confidence            99887531    79999999999998887765432211   10    111234789999999999999999999999999


Q ss_pred             HHhcCCeEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          183 ALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       183 AL~aGN~vvlkps~~~~~t~~----~l~~~l~~aglP~gvv~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      ||++||+||+|||+.+|+++.    .+.++|.|+|+|+|++|++++. +.++++.|+.||+++.|.||||+.+|+.|.+.
T Consensus       217 ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~  296 (549)
T cd07127         217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEAN  296 (549)
T ss_pred             HHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence            999999999999999998864    4668999999999999999985 46789999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecc---------cHHHHHHHHHHHhh
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG---------IYDEFEKKLVEKAK  328 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------~~~~f~~~l~~~~~  328 (349)
                      ++.   +++++|+||||++||++|+|++.+++.+++++|.|+||.|++++|||||++         +||+|+++|.++++
T Consensus       297 a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~  373 (549)
T cd07127         297 ARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAID  373 (549)
T ss_pred             hcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHH
Confidence            864   799999999999999999999999999999999999999999999999999         89999999999999


Q ss_pred             cccccCCCCCCCcccccCCC
Q 018922          329 AWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       329 ~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++ +|||.+..+++|||+++
T Consensus       374 ~l-~Gdp~~~~~~~Gpli~~  392 (549)
T cd07127         374 GL-LADPARAAALLGAIQSP  392 (549)
T ss_pred             Hh-cCCccccccccCCcCCH
Confidence            99 99999999999999985

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=3.1e-62  Score=474.26  Aligned_cols=286  Identities=28%  Similarity=0.386  Sum_probs=264.3

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 018922           56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG  135 (349)
Q Consensus        56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  135 (349)
                      ++.+|+++++++|++|++  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++.
T Consensus         2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~   79 (436)
T cd07135           2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK   79 (436)
T ss_pred             CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence            578999999999999999  899999999999999999999999999999999999999998864599999999999998


Q ss_pred             hhhhhcCceeecc-----CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH
Q 018922          136 AADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (349)
Q Consensus       136 ~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~  210 (349)
                      ....+.....+..     .....++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~  159 (436)
T cd07135          80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP  159 (436)
T ss_pred             HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence            8766543221111     13345789999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~  290 (349)
                      + |+|+|++|+++|++.+++ .|+.|| ++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|||+|.|++.
T Consensus       160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~  235 (436)
T cd07135         160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR  235 (436)
T ss_pred             H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence            9 699999999998665554 588999 9999999999999999999887 89999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       291 i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +++++|.++||.|++++|||||++++|+|+++|.++++++++|+| ++++++|||+++
T Consensus       236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~  292 (436)
T cd07135         236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNP  292 (436)
T ss_pred             HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCH
Confidence            999999999999999999999999999999999999999999999 899999999974

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=1.8e-61  Score=469.11  Aligned_cols=279  Identities=30%  Similarity=0.409  Sum_probs=258.1

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcC
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  142 (349)
                      +.+++|++||+  .|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|+..+++.++|++..++...+
T Consensus         2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (449)
T cd07136           2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK   79 (449)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            56889999999  8999999999999999999999999999999999999999998746999999999999988766544


Q ss_pred             c-eeecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 018922          143 E-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (349)
Q Consensus       143 ~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gv  218 (349)
                      . ..+..   .+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv  158 (449)
T cd07136          80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY  158 (449)
T ss_pred             CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence            3 22211   2334678899999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhh
Q 018922          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (349)
Q Consensus       219 v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~  298 (349)
                      +|+++| +.+.+..|+.|+ ++.|.||||+++|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus       159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~  235 (449)
T cd07136         159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN  235 (449)
T ss_pred             EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence            999998 556788898775 9999999999999999999987 7999999999999999999999999999999999999


Q ss_pred             cCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       299 ~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +||.|++++|||||+++||+|+++|.++++++++|+|++ ++++|||+++
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~  284 (449)
T cd07136         236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINE  284 (449)
T ss_pred             cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCH
Confidence            999999999999999999999999999999999999997 8999999874

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=3.9e-61  Score=469.98  Aligned_cols=286  Identities=25%  Similarity=0.345  Sum_probs=264.6

Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 018922           56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG  135 (349)
Q Consensus        56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~  135 (349)
                      +..+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|+++
T Consensus         3 ~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~   80 (484)
T PLN02203          3 APGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALS   80 (484)
T ss_pred             CCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            567999999999999999  899999999999999999999999999999999999999999864699999999999998


Q ss_pred             hhhhhcCce---eec-cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHH
Q 018922          136 AADKIHGEV---LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL  211 (349)
Q Consensus       136 ~~~~~~~~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~  211 (349)
                      ..+...+..   .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~  160 (484)
T PLN02203         81 NLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPK  160 (484)
T ss_pred             HHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH
Confidence            776654331   111 1233567889999999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC---CCCHHHHH
Q 018922          212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD---DVDVNTAA  288 (349)
Q Consensus       212 aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~---dad~~~a~  288 (349)
                      . +|+|++|+++| +.++++.|+.|+ ++.|+||||+++|+.|.+.++. +++|+++|+|||||+||++   |||+|.|+
T Consensus       161 ~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~aa  236 (484)
T PLN02203        161 Y-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVAV  236 (484)
T ss_pred             h-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHHH
Confidence            6 99999999999 778999999995 9999999999999999999987 8999999999999999997   69999999


Q ss_pred             HHHHHHHhh-hcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          289 DMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       289 ~~i~~~~~~-~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|||+++ +++|||+++
T Consensus       237 ~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~  296 (484)
T PLN02203        237 NRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNK  296 (484)
T ss_pred             HHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCH
Confidence            999999996 89999999999999999999999999999999999999986 689999985

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=3.7e-61  Score=468.60  Aligned_cols=285  Identities=41%  Similarity=0.647  Sum_probs=267.4

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhh
Q 018922           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK  139 (349)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~  139 (349)
                      |++++++.|++|++  .|++++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.....
T Consensus         1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~   77 (431)
T cd07104           1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRR   77 (431)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  89999999999999999999999999999999999999999987 6999999999999988766


Q ss_pred             hcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHH-HHHHHHHHHHcCCCCC
Q 018922          140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDG  217 (349)
Q Consensus       140 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t-~~~l~~~l~~aglP~g  217 (349)
                      ..+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.++|.++|+|+|
T Consensus        78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g  157 (431)
T cd07104          78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG  157 (431)
T ss_pred             hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence            554433322 33456788999999999999999999999999999999999999999999988 5789999999999999


Q ss_pred             cEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhh
Q 018922          218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF  297 (349)
Q Consensus       218 vv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~  297 (349)
                      ++|++++++.++++.|+.||+++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus       158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~  236 (431)
T cd07104         158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL  236 (431)
T ss_pred             cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence            9999999777789999999999999999999999999999987 899999999999999999999999999999999999


Q ss_pred             hcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       298 ~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+||.|+++++||||++++|+|+++|.++++.+++|+|+++++++||++++
T Consensus       237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~  287 (431)
T cd07104         237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINE  287 (431)
T ss_pred             cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCH
Confidence            999999999999999999999999999999999999999999999999874

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=1.8e-60  Score=463.07  Aligned_cols=280  Identities=38%  Similarity=0.589  Sum_probs=260.2

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhh
Q 018922           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK  139 (349)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~  139 (349)
                      |+++++++|++||+  .|++++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++....
T Consensus         1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~   77 (432)
T cd07105           1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQ   77 (432)
T ss_pred             CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  89999999999999999999999999999999999999988877 6999999999999988776


Q ss_pred             hcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 018922          140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (349)
Q Consensus       140 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gv  218 (349)
                      ..+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv  157 (432)
T cd07105          78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV  157 (432)
T ss_pred             hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence            544433322 2334578899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCC---chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHH
Q 018922          219 LNVVPGF---GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI  295 (349)
Q Consensus       219 v~~v~g~---~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~  295 (349)
                      +|+++|+   +.++++.|+.||+++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus       158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~  236 (432)
T cd07105         158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA  236 (432)
T ss_pred             EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence            9999984   34578999999999999999999999999999988 8999999999999999999999999999999999


Q ss_pred             hhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       296 ~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |.|+||.|+++++||||+++||+|+++|.++++++++|     .+++||++++
T Consensus       237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~  284 (432)
T cd07105         237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSA  284 (432)
T ss_pred             HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCH
Confidence            99999999999999999999999999999999999998     5889999874

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=7.3e-60  Score=462.84  Aligned_cols=287  Identities=27%  Similarity=0.383  Sum_probs=264.0

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 018922           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (349)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  134 (349)
                      .++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++
T Consensus         3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~   80 (493)
T PTZ00381          3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL   80 (493)
T ss_pred             CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999  89999999999999999999999999999999999999999987679999999999998


Q ss_pred             HhhhhhcCce-eec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH
Q 018922          135 GAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (349)
Q Consensus       135 ~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~  210 (349)
                      +..+...... ...   ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~  160 (493)
T PTZ00381         81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT  160 (493)
T ss_pred             HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence            8776653322 111   112346789999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~  290 (349)
                      ++ +|+|++++++| +.+.+..|+.|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.
T Consensus       161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~  236 (493)
T PTZ00381        161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARR  236 (493)
T ss_pred             Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence            86 99999999998 677888999987 9999999999999999999987 89999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       291 i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +++++|.|+||.|+++++||||++++|+|+++|.+.+++++ |+|.++++++|||+++
T Consensus       237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~  293 (493)
T PTZ00381        237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNE  293 (493)
T ss_pred             HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCH
Confidence            99999999999999999999999999999999999999986 6666788999999974

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=5.9e-60  Score=457.86  Aligned_cols=279  Identities=26%  Similarity=0.362  Sum_probs=255.9

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcC
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  142 (349)
                      +++++|++||+  .|+.++..+|.++|++++++|++++|+|++++++|+|||+.++...|+..+++.++|++.......+
T Consensus         3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   80 (432)
T cd07137           3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA   80 (432)
T ss_pred             HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            58999999999  8999999999999999999999999999999999999999987645999999999999988765443


Q ss_pred             ce---eec-cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 018922          143 EV---LKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (349)
Q Consensus       143 ~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gv  218 (349)
                      ..   .+. ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv  159 (432)
T cd07137          81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA  159 (432)
T ss_pred             CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence            21   111 11234577899999999999999999999999999999999999999999999999999999995 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHh-h
Q 018922          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-F  297 (349)
Q Consensus       219 v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~-~  297 (349)
                      +|+++| +.+.+..|+.| .++.|+||||+++|+.|.+.++. ++||+++|+|||||+||++|||+|.|++.++.++| .
T Consensus       160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~  236 (432)
T cd07137         160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC  236 (432)
T ss_pred             EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence            999999 56688889987 69999999999999999999887 89999999999999999999999999999999999 5


Q ss_pred             hcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       298 ~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+||.|++++|+|||++++|+|+++|.++++++++|||. +++++|||+++
T Consensus       237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~  286 (432)
T cd07137         237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPK-ESKDLSRIVNS  286 (432)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCC-ccCCcCCcCCH
Confidence            999999999999999999999999999999999999994 58999999984

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=1.8e-59  Score=450.90  Aligned_cols=258  Identities=35%  Similarity=0.603  Sum_probs=242.4

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEc
Q 018922           89 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII  167 (349)
Q Consensus        89 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~  167 (349)
                      |+++++.|++++++|++++++|+|||+.++. .|+..+++.++|++.++....+...+.. .+...+++++|+|||++|+
T Consensus         1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~   79 (409)
T PRK10090          1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL   79 (409)
T ss_pred             CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence            5789999999999999999999999999998 6999999999999998877655433222 2335678899999999999


Q ss_pred             CCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCC
Q 018922          168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS  247 (349)
Q Consensus       168 p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs  247 (349)
                      |||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||
T Consensus        80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs  159 (409)
T PRK10090         80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS  159 (409)
T ss_pred             CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence            99999999999999999999999999999999999999999999999999999999977788999999999999999999


Q ss_pred             hHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHh
Q 018922          248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA  327 (349)
Q Consensus       248 ~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~  327 (349)
                      +++|+.|.+.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++++|+++|.+++
T Consensus       160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~  238 (409)
T PRK10090        160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM  238 (409)
T ss_pred             HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence            9999999999887 899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccCCCCC-CCcccccCCC
Q 018922          328 KAWVVGDPFDP-AVRQGPQVLI  348 (349)
Q Consensus       328 ~~l~~g~p~~~-~~~~Gpl~~~  348 (349)
                      +++++|||+++ ++++|||+++
T Consensus       239 ~~~~~G~p~~~~~~~~gpli~~  260 (409)
T PRK10090        239 QAVQFGNPAERNDIAMGPLINA  260 (409)
T ss_pred             HhcCCCCCCCcccCccccccCH
Confidence            99999999998 9999999985

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=8e-59  Score=451.61  Aligned_cols=279  Identities=28%  Similarity=0.362  Sum_probs=255.1

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcC
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  142 (349)
                      +++++|++||+  .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++++++.+.....
T Consensus         2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~   79 (443)
T cd07132           2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK   79 (443)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            58899999999  8999999999999999999999999999999999999999998656999999999999987766543


Q ss_pred             ceeec----cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 018922          143 EVLKM----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (349)
Q Consensus       143 ~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gv  218 (349)
                      ...+.    ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv  158 (443)
T cd07132          80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC  158 (443)
T ss_pred             CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence            22111    11234688899999999999999999999999999999999999999999999999999999985 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhh
Q 018922          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (349)
Q Consensus       219 v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~  298 (349)
                      +|+++|++. .+..|+. ++|+.|.||||+++|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus       159 ~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~  235 (443)
T cd07132         159 YPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN  235 (443)
T ss_pred             EEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence            999999544 4566775 589999999999999999999887 8999999999999999999999999999999999999


Q ss_pred             cCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       299 ~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +||.|++++|||||++++|+|+++|.+++++++.|+| ++++++|||+++
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~  284 (443)
T cd07132         236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIIND  284 (443)
T ss_pred             CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCH
Confidence            9999999999999999999999999999999999988 688999999985

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=1.4e-58  Score=449.01  Aligned_cols=278  Identities=31%  Similarity=0.406  Sum_probs=252.8

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc-hhhhhhCcHHHHHHHHHHHHHhhhhhc
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL-HSWAKMGDIPGAANTLRYYAGAADKIH  141 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~~~~~~~~~  141 (349)
                      ..+++|++||+  .|+++|..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.++|++.......
T Consensus         2 ~~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~   79 (434)
T cd07133           2 ALLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWM   79 (434)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            36788999999  899999999999999999999999999999999999985 566654699999999999998776544


Q ss_pred             Ccee-ecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCC
Q 018922          142 GEVL-KMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG  217 (349)
Q Consensus       142 ~~~~-~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~g  217 (349)
                      +... ...   .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g  158 (434)
T cd07133          80 KPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDED  158 (434)
T ss_pred             CCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcC
Confidence            3221 111   2334678999999999999999999999999999999999999999999999999999999997 9999


Q ss_pred             cEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhh
Q 018922          218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF  297 (349)
Q Consensus       218 vv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~  297 (349)
                      ++|+++| +.++++.|+.|+ ++.|+||||+++|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.
T Consensus       159 ~~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~  235 (434)
T cd07133         159 EVAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL  235 (434)
T ss_pred             eEEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhc
Confidence            9999999 557888898776 9999999999999999999887 899999999999999999999999999999999999


Q ss_pred             hcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       298 ~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+||.|++++|||||++++|+|+++|.++++++++|+  ++++++||++++
T Consensus       236 ~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~  284 (434)
T cd07133         236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINE  284 (434)
T ss_pred             cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCH
Confidence            9999999999999999999999999999999999986  467899999974

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=1.8e-58  Score=448.13  Aligned_cols=280  Identities=27%  Similarity=0.341  Sum_probs=257.9

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcC
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  142 (349)
                      +++++|++||+  .|+++|..+|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.+++++........
T Consensus         2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~   79 (433)
T cd07134           2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK   79 (433)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            57889999999  8999999999999999999999999999999999999999998656999999999999887654332


Q ss_pred             ce-eecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 018922          143 EV-LKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (349)
Q Consensus       143 ~~-~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gv  218 (349)
                      .. .+..   .+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~  158 (433)
T cd07134          80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE  158 (433)
T ss_pred             CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence            21 1111   2345689999999999999999999999999999999999999999999999999999999999 99999


Q ss_pred             EEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhh
Q 018922          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (349)
Q Consensus       219 v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~  298 (349)
                      +++++| +.+.+..|++|+ ++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus       159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~  235 (433)
T cd07134         159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN  235 (433)
T ss_pred             EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence            999999 557889999998 9999999999999999999887 7899999999999999999999999999999999999


Q ss_pred             cCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC-CCCCCcccccCCC
Q 018922          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP-FDPAVRQGPQVLI  348 (349)
Q Consensus       299 ~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p-~~~~~~~Gpl~~~  348 (349)
                      +||.|++++|||||++++|+|+++|+++++.++.|+| ++.++++|||+++
T Consensus       236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~  286 (433)
T cd07134         236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVND  286 (433)
T ss_pred             cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCH
Confidence            9999999999999999999999999999999988887 8889999999874

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=6.5e-59  Score=448.42  Aligned_cols=278  Identities=24%  Similarity=0.295  Sum_probs=248.5

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHH-HHHHHHHhhhh
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN-TLRYYAGAADK  139 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~~~~~~~  139 (349)
                      +++++++|++||+  .|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|+..+++ .+++++..  .
T Consensus         1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~   76 (436)
T cd07122           1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K   76 (436)
T ss_pred             ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence            4789999999999  89999999999999999999999999999999999999999987447888887 78888752  2


Q ss_pred             hcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHH----HHcCCC
Q 018922          140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVP  215 (349)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l----~~aglP  215 (349)
                      ..+.. ........+++|+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++    .++|+|
T Consensus        77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P  155 (436)
T cd07122          77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP  155 (436)
T ss_pred             ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence            22221 1122334578899999999999999999999999999999999999999999999999988776    479999


Q ss_pred             CCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHH
Q 018922          216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI  295 (349)
Q Consensus       216 ~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~  295 (349)
                      +|++|+++|.+.++++.|++||+|+.|+||||+++++    .++. +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus       156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~  230 (436)
T cd07122         156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK  230 (436)
T ss_pred             chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence            9999999997778899999999999999999999754    3444 6899999999999999999999999999999999


Q ss_pred             hhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc-------cccCC-CCCCCcccccCCC
Q 018922          296 LFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW-------VVGDP-FDPAVRQGPQVLI  348 (349)
Q Consensus       296 ~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l-------~~g~p-~~~~~~~Gpl~~~  348 (349)
                      |.|+||.|++++|||||+++||+|+++|.++...+       ++|++ .+.++++||+++.
T Consensus       231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~  291 (436)
T cd07122         231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVG  291 (436)
T ss_pred             hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccC
Confidence            99999999999999999999999999999999988       99999 4678899999874

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=2.9e-58  Score=446.39  Aligned_cols=279  Identities=30%  Similarity=0.406  Sum_probs=255.3

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcC
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG  142 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~  142 (349)
                      +++++|++||+  .|+++|..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++.......+
T Consensus         2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~   79 (426)
T cd07087           2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK   79 (426)
T ss_pred             hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            48899999999  8999999999999999999999999999999999999998777656999999999999987765543


Q ss_pred             ce-e--ec-cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 018922          143 EV-L--KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV  218 (349)
Q Consensus       143 ~~-~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gv  218 (349)
                      .. .  +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.+ |+|+|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv  158 (426)
T cd07087          80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA  158 (426)
T ss_pred             CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence            22 1  10 1233467889999999999999999999999999999999999999999999999999999999 699999


Q ss_pred             EEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhh
Q 018922          219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFN  298 (349)
Q Consensus       219 v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~  298 (349)
                      +|+++| +.+.+..|+.|| ++.|.||||+++|+.|.+.++. ++||+++|+|||||+||++|||+|.|++.++.++|.+
T Consensus       159 ~~vv~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~  235 (426)
T cd07087         159 VAVVEG-GVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN  235 (426)
T ss_pred             EEEEeC-CchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence            999998 446688999998 9999999999999999999987 7899999999999999999999999999999999999


Q ss_pred             cCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       299 ~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +||.|++++|||||++++|+|+++|.+++++++.|+|. +.+++|||+++
T Consensus       236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~~  284 (426)
T cd07087         236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIINE  284 (426)
T ss_pred             cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCCH
Confidence            99999999999999999999999999999999877765 68899999974

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=8.3e-59  Score=433.88  Aligned_cols=308  Identities=34%  Similarity=0.496  Sum_probs=288.8

Q ss_pred             eecCeeeeCCCCCeEEeecCCCC-ceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           25 FINGEFVDSVSGKTFETIDPRTG-EAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        25 ~i~g~~~~~~~~~~~~~~~P~~g-~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      .++|+.+.  .++..+++||++- ++++.+..++.+|+++|++.|..|+.  .|..+|..+|+.+|++++++++.+..+|
T Consensus       117 ~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~L  192 (769)
T COG4230         117 IVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQL  192 (769)
T ss_pred             ccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666554  4677899999974 68999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      ..++++|.||++..+. .|+.+++++|+||+.+.+.-.+           ....+|+|+++||+|||||+.++..+++.|
T Consensus       193 ~~L~~REAGKtl~naI-AEVREAVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISPWNFPLAIFtGqiaAA  260 (769)
T COG4230         193 MGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISPWNFPLAIFTGQIAAA  260 (769)
T ss_pred             HHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECCCCchHHHHHhHHHHH
Confidence            9999999999999987 7999999999999998765221           134789999999999999999999999999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCC-
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN-  262 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~-  262 (349)
                      |++||+|+-||.+++|+.+..-++++.|+|+|++++|+++|+|..++..|+.++++++|+||||+++++.|.++.+++. 
T Consensus       261 L~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g  340 (769)
T COG4230         261 LAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG  340 (769)
T ss_pred             HHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998854 


Q ss_pred             -CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCc
Q 018922          263 -LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVR  341 (349)
Q Consensus       263 -~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~  341 (349)
                       ..|++.|.||.|+|||+.+|--++++..++.|+|..+||+|.+.+.+|+++++.|..++.|+-.+.++++|+|..-.+|
T Consensus       341 ~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tD  420 (769)
T COG4230         341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTD  420 (769)
T ss_pred             CCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecc
Confidence             3678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCC
Q 018922          342 QGPQVLI  348 (349)
Q Consensus       342 ~Gpl~~~  348 (349)
                      +||+|+.
T Consensus       421 VGPVIda  427 (769)
T COG4230         421 VGPVIDA  427 (769)
T ss_pred             ccccccH
Confidence            9999974

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=4.6e-58  Score=443.32  Aligned_cols=256  Identities=23%  Similarity=0.239  Sum_probs=225.4

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHH--HHHHHHHhhh
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN--TLRYYAGAAD  138 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~--~l~~~~~~~~  138 (349)
                      +++|+++|++||+  .|+++|..+|.++|+++++.|++|+++|++++++|+|||+.+++ .++...+.  ..++++.   
T Consensus         1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~---   74 (439)
T cd07081           1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD---   74 (439)
T ss_pred             CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc---
Confidence            4789999999999  89999999999999999999999999999999999999999887 35554443  2233322   


Q ss_pred             hhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH----HcCC
Q 018922          139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGV  214 (349)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~----~agl  214 (349)
                      ...++..+.......+++++|+|||++|+|||||+...++++++||++||+||+|||+++|.++..+++++.    ++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~  154 (439)
T cd07081          75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA  154 (439)
T ss_pred             cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence            112222232223345789999999999999999999999999999999999999999999999988888774    7899


Q ss_pred             CCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHH
Q 018922          215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG  294 (349)
Q Consensus       215 P~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~  294 (349)
                      |+|++|++++.+.++++.|+.||+|+.|+||||++    +.+.++. ++||+++|+|||||+||++|||+|.|++.++++
T Consensus       155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~  229 (439)
T cd07081         155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS  229 (439)
T ss_pred             ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence            99999999987778899999999999999999998    4556666 789999999999999999999999999999999


Q ss_pred             HhhhcCCCcccCceEEEecccHHHHHHHHHHHh
Q 018922          295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA  327 (349)
Q Consensus       295 ~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~  327 (349)
                      +|.|+||.|++.+|||||+++||+|+++|.+++
T Consensus       230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~  262 (439)
T cd07081         230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG  262 (439)
T ss_pred             HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999886

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=5e-57  Score=441.87  Aligned_cols=285  Identities=19%  Similarity=0.191  Sum_probs=249.3

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 018922           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (349)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  134 (349)
                      ..+.+|+++++++|++||+  .|++++.++|.++|+++++.|++++++|++++++|+|||..+++..+.....+.+.+++
T Consensus         4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~   81 (488)
T TIGR02518         4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI   81 (488)
T ss_pred             ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence            4577899999999999999  89999999999999999999999999999999999999988765323334555565555


Q ss_pred             HhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHH----HHHHH
Q 018922          135 GAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAK  210 (349)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l----~~~l~  210 (349)
                      ...+.. +. ...+.+...+.+++|+|||++|.|||||+....+++++||++||+||+|||+.+|.++..+    .++|.
T Consensus        82 ~~~~~~-G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~  159 (488)
T TIGR02518        82 KDMKTI-GI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE  159 (488)
T ss_pred             hhCccc-ce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence            433222 22 2222334457789999999999999999999999999999999999999999999999984    55568


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~  290 (349)
                      ++|+|+|++|++++.+.+.++.|+.||+|++|+||||+..++.+    .. .++|+++|+|||+|+||++|||+|.|++.
T Consensus       160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~  234 (488)
T TIGR02518       160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YS-SGTPAIGVGPGNGPAYIERTANVKKAVRD  234 (488)
T ss_pred             HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence            99999999999998777899999999999999999999965443    33 67999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHH-------hhcccccCC-CCCCCcccccCCC
Q 018922          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK-------AKAWVVGDP-FDPAVRQGPQVLI  348 (349)
Q Consensus       291 i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~-------~~~l~~g~p-~~~~~~~Gpl~~~  348 (349)
                      ++.++|.|+||.|++.+|||||+++||+|+++|.++       .+.+++|+| +++++++||++++
T Consensus       235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~  300 (488)
T TIGR02518       235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVG  300 (488)
T ss_pred             HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCccccc
Confidence            999999999999999999999999999999999998       899999996 6788999999864

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=6.4e-57  Score=438.13  Aligned_cols=274  Identities=23%  Similarity=0.234  Sum_probs=251.2

Q ss_pred             HHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhc
Q 018922           62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH  141 (349)
Q Consensus        62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~  141 (349)
                      ++|+++|++||+  .|+++|..+|.++|+++++.|++++++|++++++|+|||+ ++. .|+..+++.++|++.......
T Consensus         2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~   77 (442)
T cd07084           2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR   77 (442)
T ss_pred             hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence            689999999999  8999999999999999999999999999999999999999 555 699999999999998876431


Q ss_pred             --Ccee---eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCC-C
Q 018922          142 --GEVL---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-P  215 (349)
Q Consensus       142 --~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~agl-P  215 (349)
                        +...   +.......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P  157 (442)
T cd07084          78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP  157 (442)
T ss_pred             ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence              1111   111123467889999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             CCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCC-CHHHHHHHHHHH
Q 018922          216 DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLG  294 (349)
Q Consensus       216 ~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~da-d~~~a~~~i~~~  294 (349)
                      ++++++++|+++ .+..|+.||+++.|+||||+++|+.|.+.++.   +|+++|+|||||+||++|| |+|.+++.++++
T Consensus       158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~  233 (442)
T cd07084         158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD  233 (442)
T ss_pred             ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence            999999999665 89999999999999999999999999998753   8999999999999999999 699999999999


Q ss_pred             HhhhcCCCcccCceEEEecc-cHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          295 ILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       295 ~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|.|+||.|++++|||||++ ++++|+++|.++++++++|     ++++||++++
T Consensus       234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~  283 (442)
T cd07084         234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF  283 (442)
T ss_pred             HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH
Confidence            99999999999999999999 9999999999999999999     6889998763

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=7.3e-56  Score=432.37  Aligned_cols=271  Identities=27%  Similarity=0.364  Sum_probs=245.3

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhh
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  140 (349)
                      +++|+++|++|++  .|+++|..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++...+..
T Consensus         1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~   77 (454)
T cd07129           1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG   77 (454)
T ss_pred             ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence            4789999999999  89999999999999999999999999999999999999999887 69999999999999876542


Q ss_pred             c--Cceeec-------cCCccceEEeecceeEEEEcCCCccHHh--hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHH
Q 018922          141 H--GEVLKM-------SRALQGYTLREPIGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA  209 (349)
Q Consensus       141 ~--~~~~~~-------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l  209 (349)
                      .  +.....       ......+++++|+|||++|+|||||+..  .++++++||++||+||+|||+.+|.++.++++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~  157 (454)
T cd07129          78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI  157 (454)
T ss_pred             CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence            2  111110       0122347889999999999999999988  4589999999999999999999999999988876


Q ss_pred             ----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC-CCcceEEeCCCCCceeEcCCC--
Q 018922          210 ----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKPVSLELGGKSPLLIFDDV--  282 (349)
Q Consensus       210 ----~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~-~~~~~~le~gG~~~~iV~~da--  282 (349)
                          .++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|++.++.+ ++||+++|+|||||+||++|+  
T Consensus       158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~  237 (454)
T cd07129         158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA  237 (454)
T ss_pred             HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence                5899999999999997767899999999999999999999999999988863 589999999999999999999  


Q ss_pred             -CHHHHHHHHHHHHhhhcCCCcccCceEEEecc-cHHHHHHHHHHHhhcccccC
Q 018922          283 -DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       283 -d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~~~l~~g~  334 (349)
                       |+|.|++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++|.
T Consensus       238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~  291 (454)
T cd07129         238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQT  291 (454)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCCC
Confidence             89999999999999999999999999999999 99999999999999999874

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=1.4e-55  Score=426.05  Aligned_cols=254  Identities=22%  Similarity=0.257  Sum_probs=226.0

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhh
Q 018922           58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA  137 (349)
Q Consensus        58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~  137 (349)
                      .+|+++++++|++||+  .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++.       ++.+++++...
T Consensus         3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~   73 (429)
T cd07121           3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT   73 (429)
T ss_pred             hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence            4799999999999999  89999999999999999999999999999999999999986643       45566665432


Q ss_pred             hhhcCceee---ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHH----H
Q 018922          138 DKIHGEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----K  210 (349)
Q Consensus       138 ~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l----~  210 (349)
                      ..... ..+   .......+++++|+|||++|.|||||+...++++++||++||+||+|||+.+|.++..+++++    .
T Consensus        74 ~~~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~  152 (429)
T cd07121          74 PGTED-LTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIA  152 (429)
T ss_pred             Ccccc-cccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHH
Confidence            11110 001   111223477899999999999999999999999999999999999999999999999999877    5


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~  290 (349)
                      ++|+|+|++|++++.+.+.++.|++||+|+.|+||||+.+|+.|++.     .||+++|+|||||+||++|||+|+|++.
T Consensus       153 ~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~  227 (429)
T cd07121         153 EAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARD  227 (429)
T ss_pred             HcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHH
Confidence            78999999999998777789999999999999999999999999864     4899999999999999999999999999


Q ss_pred             HHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHH
Q 018922          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK  326 (349)
Q Consensus       291 i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~  326 (349)
                      +++++|.|+||.|++++|||||+++||+|+++|.++
T Consensus       228 i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~  263 (429)
T cd07121         228 IVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN  263 (429)
T ss_pred             HHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC
Confidence            999999999999999999999999999999999987

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=7.5e-55  Score=424.18  Aligned_cols=257  Identities=23%  Similarity=0.248  Sum_probs=227.3

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 018922           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (349)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  134 (349)
                      ....+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.       +.+++++
T Consensus        32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~  102 (465)
T PRK15398         32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA  102 (465)
T ss_pred             ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence            4578999999999999999  899999999999999999999999999999999999999887652       3345554


Q ss_pred             HhhhhhcCc--eeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH--
Q 018922          135 GAADKIHGE--VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK--  210 (349)
Q Consensus       135 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~--  210 (349)
                      .......+.  ..........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.  
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~  182 (465)
T PRK15398        103 EKTPGVEDLTTEALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEA  182 (465)
T ss_pred             HHhccccccccCcccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHH
Confidence            433111110  0011112345788899999999999999999999999999999999999999999999999998875  


Q ss_pred             --HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHH
Q 018922          211 --LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA  288 (349)
Q Consensus       211 --~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~  288 (349)
                        ++|+|+|++|++++.+.+.++.|++||+||.|+||||+++|+.|++     ..+|+++|+|||||+||++|||+|.|+
T Consensus       183 l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa  257 (465)
T PRK15398        183 IVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAA  257 (465)
T ss_pred             HHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHH
Confidence              6999999999999866778999999999999999999999999987     248999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHH
Q 018922          289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE  325 (349)
Q Consensus       289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~  325 (349)
                      +.+++++|.|+||.|++++|||||+++||+|+++|.+
T Consensus       258 ~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~  294 (465)
T PRK15398        258 RDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEK  294 (465)
T ss_pred             HHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=2.4e-54  Score=421.09  Aligned_cols=283  Identities=53%  Similarity=0.834  Sum_probs=264.6

Q ss_pred             HHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhc
Q 018922           62 DLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH  141 (349)
Q Consensus        62 ~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~  141 (349)
                      ++++++|++|++  .|+.++.++|.++|.++++.|.+++++|+++++.|+||++..+. .|+..+++.+++++...+...
T Consensus         1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~   77 (432)
T cd07078           1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLH   77 (432)
T ss_pred             CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            368899999999  89999999999999999999999999999999999999998876 699999999999988877655


Q ss_pred             Ccee-eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEE
Q 018922          142 GEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN  220 (349)
Q Consensus       142 ~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~  220 (349)
                      +... +...+...+.+++|+||+++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~  157 (432)
T cd07078          78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN  157 (432)
T ss_pred             CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence            4432 222345567889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcC
Q 018922          221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG  300 (349)
Q Consensus       221 ~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~G  300 (349)
                      ++++++.++...|+.|++++.|.||||..+++.|.+.++. +++|+++|+||+|++||++|+|++.+++.+++++|.++|
T Consensus       158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G  236 (432)
T cd07078         158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG  236 (432)
T ss_pred             EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence            9999766688999999999999999999999999999987 789999999999999999999999999999999999999


Q ss_pred             CCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          301 EICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       301 Q~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |.|+++++||||++++++|+++|.++++++++|+|+++++++||++++
T Consensus       237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~  284 (432)
T cd07078         237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISA  284 (432)
T ss_pred             CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCH
Confidence            999999999999999999999999999999999999999999999874

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=2e-53  Score=410.55  Aligned_cols=264  Identities=23%  Similarity=0.293  Sum_probs=233.8

Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHHH
Q 018922           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGAA  127 (349)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~~  127 (349)
                      +|+++++++|++||+  .|+++|..+|.++|+++++.|++|+++|++++++|+||+..    ++..       .|+..++
T Consensus         4 ~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~   81 (417)
T PRK00197          4 EYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIA   81 (417)
T ss_pred             hHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHH
Confidence            689999999999999  89999999999999999999999999999999988877742    3321       4788899


Q ss_pred             HHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHH
Q 018922          128 NTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY  204 (349)
Q Consensus       128 ~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~  204 (349)
                      +.+++++.+.+.. +...+.   ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus        82 ~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~  158 (417)
T PRK00197         82 EGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA  158 (417)
T ss_pred             HHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence            9999998776543 333221   12234678899999999999886 4 6788999999999999999999999999999


Q ss_pred             HHHHH----HHcCCCCCcEEEEeCCc-hhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc
Q 018922          205 FAHLA----KLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF  279 (349)
Q Consensus       205 l~~~l----~~aglP~gvv~~v~g~~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~  279 (349)
                      +++++    .++|+|+|++|+++|.+ ..+++.|..||+++.|+||||+++|+.|++.+    +||+++|+|||||+||+
T Consensus       159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~  234 (417)
T PRK00197        159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVD  234 (417)
T ss_pred             HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEe
Confidence            88874    68999999999999644 45788888899999999999999999998864    58999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       280 ~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      +|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|.++++++++
T Consensus       235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  286 (417)
T PRK00197        235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGV  286 (417)
T ss_pred             CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCC
Confidence            999999999999999999999 9999999999999999999999999999987

>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.5e-53  Score=387.16  Aligned_cols=325  Identities=25%  Similarity=0.351  Sum_probs=295.7

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE   97 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~   97 (349)
                      +.++|+.|||+.+...  ......+|++ +.+++++..++..++++||++|.+|++  .|..+|+.+|.+|++|+|+++.
T Consensus        57 ~~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlis  132 (561)
T KOG2455|consen   57 PLEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIS  132 (561)
T ss_pred             ceeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhc
Confidence            5678999999999853  3477888985 679999999999999999999999999  9999999999999999999999


Q ss_pred             -HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecc-eeEEEEcCCCccHH
Q 018922           98 -EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHIIPWNFPTT  174 (349)
Q Consensus        98 -~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~  174 (349)
                       +++-+|....++..||+..+|.++-+.+.++++|+.+..+..+....... ..+..+...++|+ |.|..|+||||-..
T Consensus       133 tkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI  212 (561)
T KOG2455|consen  133 TKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAI  212 (561)
T ss_pred             chHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeee
Confidence             78889999999999999999876557889999999999888776554332 2344455667777 99999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ......+||| +||+|++|||..+.++++.+.++|+|||+|+|++|+|++++..+++.+..+|+..++.||||+.+-+.+
T Consensus       213 ~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~l  291 (561)
T KOG2455|consen  213 GGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHL  291 (561)
T ss_pred             ccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHH
Confidence            9888889999 599999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhh-----CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc
Q 018922          255 MQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (349)
Q Consensus       255 ~~~~a~-----~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~  329 (349)
                      .++.+.     +...|++.|+||||.-+|+++||++.++...++++|.++||.|.+++|+||++++++++.++|.+..++
T Consensus       292 wk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q  371 (561)
T KOG2455|consen  292 WKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ  371 (561)
T ss_pred             HHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence            998877     245789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCC-CCCCCcccccCCC
Q 018922          330 WVVGDP-FDPAVRQGPQVLI  348 (349)
Q Consensus       330 l~~g~p-~~~~~~~Gpl~~~  348 (349)
                      +++||| .|.++++||+|+.
T Consensus       372 ~~igd~~~d~~~f~gavIh~  391 (561)
T KOG2455|consen  372 LKIGDPVIDFSTFIGAVIHD  391 (561)
T ss_pred             cccCCccccccchhhhhccH
Confidence            999998 7779999999964

>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=9e-53  Score=378.25  Aligned_cols=311  Identities=27%  Similarity=0.440  Sum_probs=286.5

Q ss_pred             CCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 018922           34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK  113 (349)
Q Consensus        34 ~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk  113 (349)
                      +..+.++++-|.||..+++++..++.|+++-+.-|++|++  .|.+.+...|.++|+.+.+.+-+|.|.+++..+++|||
T Consensus        61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGK  138 (583)
T KOG2454|consen   61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGK  138 (583)
T ss_pred             CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCc
Confidence            3556899999999999999999999999999999999999  89999999999999999999999999999999999999


Q ss_pred             chhhhhhCcHHHHHHHHHHHHHhhhhhcCc-eeecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCe
Q 018922          114 LHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT  189 (349)
Q Consensus       114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~  189 (349)
                      +..++..+|+-...+.+.|......+.... ..|..   .-...++.++|+||++.|.|||||+.+.+..++.||.+||+
T Consensus       139 TmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNa  218 (583)
T KOG2454|consen  139 TMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNA  218 (583)
T ss_pred             hhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCe
Confidence            999999999999999999988776554322 22211   12345788999999999999999999999999999999999


Q ss_pred             EEEecCCCChHHHHHHHH----HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcc
Q 018922          190 MIVKPAEQTPLIALYFAH----LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP  265 (349)
Q Consensus       190 vvlkps~~~~~t~~~l~~----~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~  265 (349)
                      +|+|-|+.+.++.....+    +|+..|-|+++++++++ =++.+++|.+|++++.+.|.||..+++.|++.+++ .++|
T Consensus       219 IVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LTP  296 (583)
T KOG2454|consen  219 IVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTP  296 (583)
T ss_pred             EEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcCc
Confidence            999999999988866544    56778999999999999 45789999999999999999999999999999998 8999


Q ss_pred             eEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCccccc
Q 018922          266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ  345 (349)
Q Consensus       266 ~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl  345 (349)
                      +++|+|||+++||++|+|++..+..++++.|-.+||.|.+.+|++||+++||.|+..|.++++.++.|.|+.+.+|||.|
T Consensus       297 v~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm  376 (583)
T KOG2454|consen  297 VTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAM  376 (583)
T ss_pred             EEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 018922          346 VLI  348 (349)
Q Consensus       346 ~~~  348 (349)
                      ++.
T Consensus       377 ~s~  379 (583)
T KOG2454|consen  377 CSQ  379 (583)
T ss_pred             hhc
Confidence            875

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=4.5e-53  Score=403.79  Aligned_cols=254  Identities=21%  Similarity=0.240  Sum_probs=225.9

Q ss_pred             HHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHhCCch------hhhhhCcHHHHHHHHHHHHH
Q 018922           68 ARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVL------EALDAGKLH------SWAKMGDIPGAANTLRYYAG  135 (349)
Q Consensus        68 A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~~ev~~~~~~l~~~~~  135 (349)
                      |++||+  .|+++|..+|.++|+++++.|++++++|+++      +++|+|||.      .++. .|+..+++.++++++
T Consensus         1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~   77 (398)
T TIGR00407         1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIE   77 (398)
T ss_pred             ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhc
Confidence            567888  8999999999999999999999999999999      999999994      2344 589999999999998


Q ss_pred             hhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHH----
Q 018922          136 AADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----  208 (349)
Q Consensus       136 ~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~----  208 (349)
                      .++.+ ++..+.   ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..++++    
T Consensus        78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a  154 (398)
T TIGR00407        78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA  154 (398)
T ss_pred             CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence            87654 443322   12445688899999999999997 6 67888999999999999999999999999999999    


Q ss_pred             HHHcCCCCCcEEEEeCCc-hhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHH
Q 018922          209 AKLAGVPDGVLNVVPGFG-PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA  287 (349)
Q Consensus       209 l~~aglP~gvv~~v~g~~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a  287 (349)
                      |.++|+|+|++|+++|.+ +++++.|..||+|+.|+||||+.+++.+.+.    ..+|+++|+|||||+||++|||+|.|
T Consensus       155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A  230 (398)
T TIGR00407       155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA  230 (398)
T ss_pred             HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence            569999999999999844 4578899999999999999999999998764    35799999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      ++.+++++|.+ ||.|++++|+|||+++||+|+++|.++++++++
T Consensus       231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~  274 (398)
T TIGR00407       231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV  274 (398)
T ss_pred             HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC
Confidence            99999999964 999999999999999999999999999987653

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=8.8e-53  Score=404.69  Aligned_cols=259  Identities=22%  Similarity=0.264  Sum_probs=226.8

Q ss_pred             HHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhh-------hCcHHHHHHHHH
Q 018922           63 LAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLR  131 (349)
Q Consensus        63 ~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~-------~~ev~~~~~~l~  131 (349)
                      ..+++|++||+  .|+++|.++|.++|.++++.|++++++|++++++|+||+..    ++.       ..|+..+++.++
T Consensus         2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~   79 (406)
T cd07079           2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR   79 (406)
T ss_pred             hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence            56788999999  89999999999999999999999999999999777766643    222       138999999999


Q ss_pred             HHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHH
Q 018922          132 YYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL  208 (349)
Q Consensus       132 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~  208 (349)
                      +++...+. .+...+.   ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..++++
T Consensus        80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~  156 (406)
T cd07079          80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI  156 (406)
T ss_pred             HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence            99876543 2322221   1223457889999999999996 55 67889999999999999999999999999999988


Q ss_pred             HH----HcCCCCCcEEEEeCCch-hHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCC
Q 018922          209 AK----LAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVD  283 (349)
Q Consensus       209 l~----~aglP~gvv~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad  283 (349)
                      +.    ++|+|+|++|+++|.+. .+++.|.+||+++.|+||||+++|+.|++.+    ++|+++|+|||||+||++|||
T Consensus       157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD  232 (406)
T cd07079         157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD  232 (406)
T ss_pred             HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence            86    89999999999998543 6788899999999999999999999998776    589999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          284 VNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       284 ~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      +|.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++..
T Consensus       233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~g  279 (406)
T cd07079         233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAG  279 (406)
T ss_pred             HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCC
Confidence            99999999999999999 999999999999999999999999988753

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]

Probab=100.00  E-value=2.4e-53  Score=390.33  Aligned_cols=301  Identities=45%  Similarity=0.786  Sum_probs=279.4

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      .||+|+++.+++++++..+||.|+.+|++++.++..|+++|+++|+.||..|+|++++..+|.+.|.++++++++|++||
T Consensus       424 ~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eel  503 (881)
T KOG2452|consen  424 LFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEEL  503 (881)
T ss_pred             hccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchh
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccC----CccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR----ALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  179 (349)
                      +.+.+++.|.-...+...-+...++.+||++.+.+.+.+...|...    .....+.++|+|||++|.|||||+..+.|+
T Consensus       504 at~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk  583 (881)
T KOG2452|consen  504 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWK  583 (881)
T ss_pred             hhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHH
Confidence            9999999997766666567778899999999999999999888642    234578899999999999999999999999


Q ss_pred             HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      .+.+|++-              ...++++       .|++|+++|+|+-+++.|..||+|+.|-||||+++|+.|++.|+
T Consensus       584 ~aaclaa~--------------~~k~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca  642 (881)
T KOG2452|consen  584 TAACLAAQ--------------VLKFAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCA  642 (881)
T ss_pred             HHHHHHHH--------------Hhhhhhh-------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHh
Confidence            99998632              1112221       48999999999999999999999999999999999999999999


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      .++.|++.||+||++|+||+.|||+++|++....+.|++.|..|.+.-|+||.+++.|+|++++++.++++++|||+|.+
T Consensus       643 ~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~  722 (881)
T KOG2452|consen  643 ISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRD  722 (881)
T ss_pred             hcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCccccc
Confidence            98999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Cccccc
Q 018922          340 VRQGPQ  345 (349)
Q Consensus       340 ~~~Gpl  345 (349)
                      ++-||-
T Consensus       723 t~hgpq  728 (881)
T KOG2452|consen  723 TDHGPQ  728 (881)
T ss_pred             ccCCch
Confidence            999994

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-51  Score=425.05  Aligned_cols=266  Identities=21%  Similarity=0.251  Sum_probs=231.4

Q ss_pred             EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH
Q 018922           52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR  131 (349)
Q Consensus        52 ~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~  131 (349)
                      .+...+.+|+++++++|++||+  .|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++..++..+++.++
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~   82 (862)
T PRK13805          5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY   82 (862)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence            4567889999999999999999  89999999999999999999999999999999999999998876334444445554


Q ss_pred             HHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHH--
Q 018922          132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA--  209 (349)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l--  209 (349)
                      ++.. .+...+. ...+.....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++  
T Consensus        83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~  160 (862)
T PRK13805         83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD  160 (862)
T ss_pred             HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence            4432 1112221 11122334578899999999999999999999999999999999999999999999999988876  


Q ss_pred             --HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHH
Q 018922          210 --KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA  287 (349)
Q Consensus       210 --~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a  287 (349)
                        .++|+|+|++|+++|.+.+.++.|++||++|.|+||||+.++    +.++. +++|+++|+|||||+||++|||++.|
T Consensus       161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~-~~~pv~~e~gGk~p~iV~~dADl~~A  235 (862)
T PRK13805        161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYS-SGKPALGVGAGNVPAYIDKTADIKRA  235 (862)
T ss_pred             HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHh-cCCCeEEECCCCCeEEEeCCCCHHHH
Confidence              468999999999998777889999999999999999999964    34444 78999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHH
Q 018922          288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK  326 (349)
Q Consensus       288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~  326 (349)
                      ++.+++++|.|+||.|++++|||||++++|+|+++|.++
T Consensus       236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~  274 (862)
T PRK13805        236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH  274 (862)
T ss_pred             HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh
Confidence            999999999999999999999999999999999999775

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=6.9e-51  Score=413.44  Aligned_cols=257  Identities=22%  Similarity=0.229  Sum_probs=226.2

Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhC--Cchhhhh---hCcHHHHH
Q 018922           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAG--KLHSWAK---MGDIPGAA  127 (349)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a~---~~ev~~~~  127 (349)
                      .++++++++|++||+  .|+++|..+|.++|+++++.|++++++|++++      ++|+|  ||+.++.   ..|+..++
T Consensus       294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~  371 (718)
T PLN02418        294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA  371 (718)
T ss_pred             HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence            359999999999999  89999999999999999999999999999996      77999  8887753   35999999


Q ss_pred             HHHHHHHHhhhhhcCceee---ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHH
Q 018922          128 NTLRYYAGAADKIHGEVLK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY  204 (349)
Q Consensus       128 ~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~  204 (349)
                      +.++|++... ...++..+   ...+...+++++|+|||++|+||| |+... ++++|||++||+||+|||+.+|+++..
T Consensus       372 ~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~  448 (718)
T PLN02418        372 ASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI  448 (718)
T ss_pred             HHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence            9999999873 33344332   112233578899999999999999 99999 899999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCc----EEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          205 FAHLAKLAGVPDGV----LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       205 l~~~l~~aglP~gv----v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      |++++.++ +|+|+    +|+++| +.++++.|..||.|+.|+||||+..   +.+.++. ++||+++|+|||||+||++
T Consensus       449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~-~~k~v~lELGGk~p~iV~~  522 (718)
T PLN02418        449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKAS-TKIPVLGHADGICHVYVDK  522 (718)
T ss_pred             HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHh-cCCCEEEeCCCcceEEEeC
Confidence            99999999 99996    999998 6678999999999999999999964   4444554 7899999999999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHH-HHHHHHHHh
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE-FEKKLVEKA  327 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~-f~~~l~~~~  327 (349)
                      |||+|.|++.++.++|.| ||.|++.+|+|||+++||+ .+..+.+..
T Consensus       523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~G~~~~~i~~a  569 (718)
T PLN02418        523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQNGGLNDLLVAL  569 (718)
T ss_pred             CCCHHHHHHHHHHHhCCC-CCccccCcEEEEeccccccccHHHHHHHH
Confidence            999999999999999999 9999999999999999998 545554443

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=1.5e-50  Score=389.26  Aligned_cols=254  Identities=20%  Similarity=0.219  Sum_probs=230.7

Q ss_pred             HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhh----------hCcHHHHHHHHHHHHHh
Q 018922           67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK----------MGDIPGAANTLRYYAGA  136 (349)
Q Consensus        67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~----------~~ev~~~~~~l~~~~~~  136 (349)
                      +|++||+  .|+++|..+|.++|+++++.|++++++|++++++|+|||+....          ..|+..+++.+++++..
T Consensus         2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~   79 (397)
T cd07077           2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS   79 (397)
T ss_pred             hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence            6889999  89999999999999999999999999999999999999965432          13888999999999876


Q ss_pred             hhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHc---C
Q 018922          137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---G  213 (349)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~a---g  213 (349)
                      .....+...+.  ....+++++|+|||++|.|||||+. .++++++||++||+||+|||+.+|+++..+++++.++   |
T Consensus        80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g  156 (397)
T cd07077          80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH  156 (397)
T ss_pred             cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence            55544433332  2356889999999999999999999 9999999999999999999999999999999999887   9


Q ss_pred             CCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHH
Q 018922          214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL  293 (349)
Q Consensus       214 lP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~  293 (349)
                      +|+++++++++.+.++++.|+.||++|.|+||||+++++.+.+.+.   .+|+++|+||++++||++|||++.|++.+++
T Consensus       157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~  233 (397)
T cd07077         157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD  233 (397)
T ss_pred             CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence            9999999999867788999999999999999999999999988762   5899999999999999999999999999999


Q ss_pred             HHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc
Q 018922          294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (349)
Q Consensus       294 ~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~  329 (349)
                      ++|.| ||.|+++++||||+++||+|+++|.++++.
T Consensus       234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~  268 (397)
T cd07077         234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV  268 (397)
T ss_pred             hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh
Confidence            99999 999999999999999999999999999876

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=1e-49  Score=380.53  Aligned_cols=276  Identities=50%  Similarity=0.771  Sum_probs=248.9

Q ss_pred             HHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee
Q 018922           67 AARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK  146 (349)
Q Consensus        67 ~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~  146 (349)
                      +|++|++  .|+.++.++|.++|+++++.|.+++++|++++++|+|||+.++. .|+...++.++++++..+...+...+
T Consensus         2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~~   78 (367)
T cd06534           2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELP   78 (367)
T ss_pred             hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            5788898  89999999999999999999999999999999999999999987 69999999999999888766543222


Q ss_pred             -ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 018922          147 -MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF  225 (349)
Q Consensus       147 -~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~  225 (349)
                       ...+....++++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..++++|.++|+|++++++++++
T Consensus        79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~  158 (367)
T cd06534          79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG  158 (367)
T ss_pred             ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence             2234556888999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCccc
Q 018922          226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA  305 (349)
Q Consensus       226 ~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a  305 (349)
                      +++..+.|+.|++++.|.||||+++++.|.+.++. +++|+++|+||+|++||++|+|++.|++.++.++|.++||.|++
T Consensus       159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s  237 (367)
T cd06534         159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA  237 (367)
T ss_pred             chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence            76789999999999999999999999999999987 78999999999999999999999999999999999999999999


Q ss_pred             CceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccC
Q 018922          306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV  346 (349)
Q Consensus       306 ~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~  346 (349)
                      +++||||++++++|+++|...+....-+.+......+||++
T Consensus       238 ~~~v~v~~~~~~~f~~~l~tl~~~~~~~~~~~~~E~fgPv~  278 (367)
T cd06534         238 ASRLLVHESIYDEFVEKLVTVLVDVDPDMPIAQEEIFGPVL  278 (367)
T ss_pred             CcEEEEcHHHHHHHHHhhceeeeCCCCCCccccCCccCceE
Confidence            99999999999999999984443333333433345688875

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.6e-50  Score=356.44  Aligned_cols=317  Identities=26%  Similarity=0.486  Sum_probs=293.6

Q ss_pred             eecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 018922           25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA  104 (349)
Q Consensus        25 ~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~  104 (349)
                      ..+|+|-.  .+...+.++|++.++|+++..++.+|.+.+++.|++|++  -|.+.|...|.+|.+++.|.|+...+.|.
T Consensus        23 vy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg   98 (507)
T KOG2453|consen   23 VYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLG   98 (507)
T ss_pred             eeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence            34568865  577899999999999999999999999999999999999  89999999999999999999999999999


Q ss_pred             HHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCC-ccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          105 VLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       105 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      +++++|+||.+.+-. +|+.+-++.++|.....+.+.+...|..+. .-..-.|.|+|+|++|+.||||....-|.-.-+
T Consensus        99 ~lvslemgkilaegv-gevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaia  177 (507)
T KOG2453|consen   99 KLVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIA  177 (507)
T ss_pred             hhhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhh
Confidence            999999999999876 899999999999999999999988886643 334557899999999999999999998888889


Q ss_pred             HhcCCeEEEecCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          184 LAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~----l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      +.+||+|++||.+++|+++..    +.+.|.+--+|++.....+| +.+++.++..+.+++.+.||||++.++.+..+..
T Consensus       178 Mv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vq  256 (507)
T KOG2453|consen  178 MVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQ  256 (507)
T ss_pred             hhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHH
Confidence            999999999999999987765    45567777899999999998 7789999999999999999999999999998887


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      + ++.+.+||+||+|++||.+|||+..++...++++...+||+|+..+|++||+++||+++++|....+++++|+|+|+.
T Consensus       257 a-rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~n  335 (507)
T KOG2453|consen  257 A-RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSN  335 (507)
T ss_pred             H-HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCC
Confidence            7 678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +.+|||+++
T Consensus       336 tl~gplht~  344 (507)
T KOG2453|consen  336 TLIGPLHTQ  344 (507)
T ss_pred             ceeccccCH
Confidence            999999864

>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.2e-47  Score=346.33  Aligned_cols=281  Identities=27%  Similarity=0.386  Sum_probs=250.6

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhh
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  140 (349)
                      +++.++.+|.+|.+|  +..|.+-|.+.|.++...+++|.+++.+++..+.+|+..++...|+...++.++++....+..
T Consensus         4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w   81 (477)
T KOG2456|consen    4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW   81 (477)
T ss_pred             HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence            456689999999954  788999999999999999999999999999999999999988889999999888888776554


Q ss_pred             cCce-ee---ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCC
Q 018922          141 HGEV-LK---MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD  216 (349)
Q Consensus       141 ~~~~-~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~  216 (349)
                      .... .+   ..-....+++.+|+|||++|+|||||+.+.+..+++||+|||+||+|||+.+|.++..+++++-+. ++.
T Consensus        82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~  160 (477)
T KOG2456|consen   82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ  160 (477)
T ss_pred             ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence            3322 11   111345688999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             CcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHh
Q 018922          217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL  296 (349)
Q Consensus       217 gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~  296 (349)
                      +.+.+|.|.-+++ ..|+.| ..|.|.||||+.+|+.|+.++++ +++||+||||||+|++|++|+|++-+++.|+++++
T Consensus       161 ~~~~VV~Ggv~ET-t~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~  237 (477)
T KOG2456|consen  161 DLIRVVNGGVPET-TELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW  237 (477)
T ss_pred             ceEEEecCCCchH-HHHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence            9999999954454 456665 89999999999999999999998 99999999999999999999999999999999999


Q ss_pred             hhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       297 ~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      .|+||.|.+++.|+++.++++++++++...++++. |....++.|++-+|++
T Consensus       238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~  288 (477)
T KOG2456|consen  238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQ  288 (477)
T ss_pred             ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhH
Confidence            99999999999999999999999999999999987 5444567888888764

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=2.5e-46  Score=380.80  Aligned_cols=253  Identities=19%  Similarity=0.201  Sum_probs=216.9

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhC---------------cHH
Q 018922           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG---------------DIP  124 (349)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~---------------ev~  124 (349)
                      +++..+++|++||+  .|+.+|.++|.++|+++++.|++++++|+    .++||++.+++..               |+.
T Consensus       287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~  360 (715)
T TIGR01092       287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS  360 (715)
T ss_pred             HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence            48888999999999  89999999999999999999999999996    5888988877621               477


Q ss_pred             HHHHHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHH
Q 018922          125 GAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI  201 (349)
Q Consensus       125 ~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t  201 (349)
                      .+++.++++++. ....+...+.   ..+...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.+
T Consensus       361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t  437 (715)
T TIGR01092       361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS  437 (715)
T ss_pred             HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence            888889998873 3322332211   11223467899999999999999 9999 5899999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCC----cEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922          202 ALYFAHLAKLAGVPDG----VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (349)
Q Consensus       202 ~~~l~~~l~~aglP~g----vv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i  277 (349)
                      +..+++++.++ +|+|    +++++++ ++++++.|..||.++.|+||||+.+|+.|++.++    +|+++|+|||||+|
T Consensus       438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i  511 (715)
T TIGR01092       438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY  511 (715)
T ss_pred             HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence            99999999999 9987    6899986 5678889999999999999999999999998862    89999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHH-HHHHHHHHhh
Q 018922          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE-FEKKLVEKAK  328 (349)
Q Consensus       278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~-f~~~l~~~~~  328 (349)
                      |++|||++.|++.++.+.|.+ ||.|++++|||||++++|+ +++++.+.+.
T Consensus       512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~~~~~~~v~~~~  562 (715)
T TIGR01092       512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRNGLLDDLIDMLR  562 (715)
T ss_pred             ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccchhHHHHHHHHH
Confidence            999999999987777777655 9999999999999999987 5556655543

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=100.00  E-value=5.5e-34  Score=275.50  Aligned_cols=270  Identities=16%  Similarity=0.154  Sum_probs=206.7

Q ss_pred             CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH-
Q 018922           57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE----EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR-  131 (349)
Q Consensus        57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~-  131 (349)
                      +..++++.+...+...+  ....++.++..+++.++++.+.    ..+.+..+.+...+|.+..... ..+......++ 
T Consensus         3 ~~~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~-~a~~~l~~~~~r   79 (422)
T cd07080           3 SAPDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLR-EGLKRLMALFRR   79 (422)
T ss_pred             CHHHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHH-HHHHHHHHHcCH
Confidence            34556666666555444  5667888888888888888775    3456666677777787755433 23333333332 


Q ss_pred             -HHHHhhhhhcCceee----ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHH
Q 018922          132 -YYAGAADKIHGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA  206 (349)
Q Consensus       132 -~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~  206 (349)
                       ........-.+....    .......+++++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.
T Consensus        80 ~~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~  158 (422)
T cd07080          80 ENLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALL  158 (422)
T ss_pred             HHHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence             111111110111000    111345578899999999999999999 78999999999999999999999999999999


Q ss_pred             HHHHHcCCCC----CcEEEEe--CCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE-c
Q 018922          207 HLAKLAGVPD----GVLNVVP--GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI-F  279 (349)
Q Consensus       207 ~~l~~aglP~----gvv~~v~--g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV-~  279 (349)
                      ++|.++ +|+    +.+++++  |.++++++.|..++  |.|+||||+++++.|++.++. +  +.++|+|||++++| .
T Consensus       159 ~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~  232 (422)
T cd07080         159 RSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVID  232 (422)
T ss_pred             HHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEec
Confidence            999999 787    8889884  65556889999887  999999999999999998875 4  56999999955555 4


Q ss_pred             CCC----CHHHHHHHHHHHHhhhcCCCcccCceEEEeccc---HHHHHHHHHHHhhcccccCCC
Q 018922          280 DDV----DVNTAADMALLGILFNKGEICVASSRVYVQEGI---YDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       280 ~da----d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~---~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      +++    |++.+++.+++++|.|+||.|.|+++||||+++   +++|.++|.++++++.-..|.
T Consensus       233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~  296 (422)
T cd07080         233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPA  296 (422)
T ss_pred             HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCC
Confidence            458    999999999999999999999999999999998   999999999999988655553

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.93  E-value=4e-25  Score=202.69  Aligned_cols=263  Identities=18%  Similarity=0.222  Sum_probs=210.7

Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc----hhhhhhCcHHHHHHHHHHHH
Q 018922           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL----HSWAKMGDIPGAANTLRYYA  134 (349)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ev~~~~~~l~~~~  134 (349)
                      .++.+..+.|++|..  ..+.++..+|.+.|.++++.|+.++++|.+..+.+.-..    +.++..+.+...-..++..+
T Consensus         3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma   80 (417)
T COG0014           3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA   80 (417)
T ss_pred             hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence            467788889999988  899999999999999999999999999999887765221    11222122222233334333


Q ss_pred             HhhhhhcCceee---------ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHH
Q 018922          135 GAADKIHGEVLK---------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF  205 (349)
Q Consensus       135 ~~~~~~~~~~~~---------~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l  205 (349)
                      .-.+++..-..|         .+.+.+.+..|.|+||+++|  |..-.+.+.....-||.+||+||+|.+..+..++..|
T Consensus        81 ~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai  158 (417)
T COG0014          81 DGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAI  158 (417)
T ss_pred             HHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHH
Confidence            333333322222         12345567788999999999  8888888999999999999999999999999999988


Q ss_pred             HHH----HHHcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcC
Q 018922          206 AHL----AKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD  280 (349)
Q Consensus       206 ~~~----l~~aglP~gvv~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~  280 (349)
                      +++    |.++|+|++.+|+++.. ...+.+.|.....||.|+-.||..--+.|.+.+    -.||+-.+-|+|.++|+.
T Consensus       159 ~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd~  234 (417)
T COG0014         159 VEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVDE  234 (417)
T ss_pred             HHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEecc
Confidence            876    56789999999999974 445556666678999999999999888877665    368888888999999999


Q ss_pred             CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc
Q 018922          281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       281 dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l  330 (349)
                      +||+|+|...++.++....+ .|++.+.++||+.+.++|+.+|.+.+...
T Consensus       235 ~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~  283 (417)
T COG0014         235 SADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA  283 (417)
T ss_pred             cCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc
Confidence            99999999999999999998 99999999999999999999999998753

>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.82  E-value=3.1e-19  Score=158.90  Aligned_cols=256  Identities=21%  Similarity=0.245  Sum_probs=193.9

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH------HhCCchhhhhh-----CcHHHHHHH
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL------DAGKLHSWAKM-----GDIPGAANT  129 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a~~-----~ev~~~~~~  129 (349)
                      +++..+.|+++++  .++.++.++|.++|.+++++|..+..++......      |+|.....-..     ..+.....-
T Consensus         2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g   79 (433)
T KOG4165|consen    2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG   79 (433)
T ss_pred             HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence            4566778999998  7999999999999999999999887777665443      44532221110     112222222


Q ss_pred             HHHHHHhhhhhcCce---eeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHH
Q 018922          130 LRYYAGAADKIHGEV---LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA  206 (349)
Q Consensus       130 l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~  206 (349)
                      ++..++.-+. .|..   .....+..-+....|+||.++|  |....-.+......|++.||.+++|....+..+...|.
T Consensus        80 ~~~ia~~edp-vGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~  156 (433)
T KOG4165|consen   80 LRQIAELEDP-VGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH  156 (433)
T ss_pred             HHHHHhcccc-hhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence            3333321111 1111   1122344456667899999999  88888888888888999999999999999998888887


Q ss_pred             HHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCC
Q 018922          207 HLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV  282 (349)
Q Consensus       207 ~~l~----~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~da  282 (349)
                      ++..    +.|.|.+.+++|.. ..++.+.|.....||+|+-.||+.-.+.|....    ..||.-+-.|.+.++|++||
T Consensus       157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~da  231 (433)
T KOG4165|consen  157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDA  231 (433)
T ss_pred             HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEecccc
Confidence            7655    45778999999998 567888888889999999999999999987663    38999999999999999999


Q ss_pred             CHHHHHHHHHHHHhhhcCCCcccCceEEEecc-cHHHHHHHHHHHh
Q 018922          283 DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKA  327 (349)
Q Consensus       283 d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~  327 (349)
                      |+++|.+.+..+++.+.- .|++.+.+++|++ ....|.+.|...+
T Consensus       232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l  276 (433)
T KOG4165|consen  232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINML  276 (433)
T ss_pred             CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHH
Confidence            999999999999999986 8999999999998 3334555554444

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.71  E-value=3.8e-15  Score=142.72  Aligned_cols=244  Identities=18%  Similarity=0.165  Sum_probs=172.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH--HhhhhhcCceeecc---CCc
Q 018922           79 RFSGAERRGIMLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA--GAADKIHGEVLKMS---RAL  151 (349)
Q Consensus        79 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~--~~~~~~~~~~~~~~---~~~  151 (349)
                      .+|.++..++|.++++.+...  .....+.+..-+|.+....+ . ++....+++.-.  ...+.-.+.....+   ...
T Consensus         2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~-~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~   79 (399)
T PF05893_consen    2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVE-Y-LEALMRWFRRENLERKLERELGNPESLDGWVPRG   79 (399)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHH-H-HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccc
Confidence            467777777777777777642  22255666666777665543 1 333333222100  00010011111111   122


Q ss_pred             cceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eCC
Q 018922          152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--PGF  225 (349)
Q Consensus       152 ~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~----gvv~~v--~g~  225 (349)
                      ..+..+.|.|++++|.|.|.|...+.. ++-+|++||..|+|.|...+.++..|.+.|.+. .|.    ..+.++  ++.
T Consensus        80 ~~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~  157 (399)
T PF05893_consen   80 DGYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG  157 (399)
T ss_pred             cchhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence            257789999999999999999976655 667888999999999999999999999999887 553    445666  344


Q ss_pred             chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCccc
Q 018922          226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA  305 (349)
Q Consensus       226 ~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a  305 (349)
                      +.++.+.+.+  ..|.|+.+||.++.+.|.+...  ..++.+....-.+..+|..+++++.+++.+..-.+.+.+|.|.|
T Consensus       158 d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS  233 (399)
T PF05893_consen  158 DEELEEALSQ--QADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS  233 (399)
T ss_pred             chHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence            5667777764  6799999999999999988443  34555555556667777778899999999999999999999999


Q ss_pred             CceEEEe---cccHHHHHHHHHHHhhcc
Q 018922          306 SSRVYVQ---EGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       306 ~~~v~V~---~~~~~~f~~~l~~~~~~l  330 (349)
                      ++.|||.   +.-.++|.++|.+++.+.
T Consensus       234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~  261 (399)
T PF05893_consen  234 PQVIFVETGDGDSVEEFAERLAEALERA  261 (399)
T ss_pred             CeEEEEECCCcccHHHHHHHHHHHHHHH
Confidence            9999999   335678888887777654

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.75  E-value=4.2e-08  Score=105.65  Aligned_cols=110  Identities=18%  Similarity=0.132  Sum_probs=86.0

Q ss_pred             eeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 018922          144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP  223 (349)
Q Consensus       144 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~  223 (349)
                      ..|.+.+..+..+.+|+|+++||+|||   ..++.++..||++||+||+||++.++.       .  .+.+|..+.+.+ 
T Consensus      1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~- 1129 (1208)
T PRK11905       1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI- 1129 (1208)
T ss_pred             cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc-
Confidence            345667888999999999999999999   557889999999999999999998652       1  123566555544 


Q ss_pred             CCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCC--cceEEeC
Q 018922          224 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLEL  270 (349)
Q Consensus       224 g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~--~~~~le~  270 (349)
                          .++..+..++.++.|.|+|++++.+.|.+.++++.+  .|++.|.
T Consensus      1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905       1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred             ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence                233467788899999999999999999999998642  3444443

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=96.88  E-value=0.004  Score=68.08  Aligned_cols=103  Identities=16%  Similarity=0.075  Sum_probs=77.2

Q ss_pred             eeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 018922          145 LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG  224 (349)
Q Consensus       145 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g  224 (349)
                      .|.+.+..+..+..|+|+|+|+.+-.   ...+.++..+|++||.+|+..++.   ....    +  +++|+.+.+.+.-
T Consensus      1173 LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~----~--~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809       1173 LPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRAL----V--AALPAAVQARIQL 1240 (1318)
T ss_pred             CCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHHH----H--HhccHHHHhHhhh
Confidence            45667888999999999999998743   357889999999999998864442   1111    1  4699988887643


Q ss_pred             CchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCC
Q 018922          225 FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL  263 (349)
Q Consensus       225 ~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~  263 (349)
                      .    .........++.|.|.|..+..+.+.++++++.+
T Consensus      1241 ~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809       1241 A----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred             c----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence            1    1222234679999999999999999999998654

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=96.71  E-value=0.0032  Score=54.68  Aligned_cols=55  Identities=27%  Similarity=0.338  Sum_probs=46.5

Q ss_pred             CceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc
Q 018922          274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       274 ~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l  330 (349)
                      .-+||++|+|++.|+..++.+.-.--  ...+.-.|+|||++.|+|+++++.+++.+
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf--~~~~VatVlVqEsireefi~rvr~~m~pl   60 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPF--APGAVATVLVQESIREEFIERVRSRMKPL   60 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCcc--cCCcEEEEEEeHHHHHHHHHHHHHhCccC
Confidence            45799999999999999999874433  24577789999999999999999998765

The function of this family is unknown.

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=92.06  E-value=12  Score=36.16  Aligned_cols=171  Identities=22%  Similarity=0.213  Sum_probs=78.0

Q ss_pred             CCccceEEeecceeEEEEcCC-CccHHh-hHHHHHhHHhcCCeEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 018922          149 RALQGYTLREPIGVVGHIIPW-NFPTTM-FFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG  224 (349)
Q Consensus       149 ~~~~~~~~~~P~GVv~~i~p~-n~P~~~-~~~~~~~AL~aGN~vvl--kps~~~~~t~~~l~~~l~~aglP~gvv~~v~g  224 (349)
                      .+.....++.|+.-|++..|. .+|+.+ .+..++||-.+|..=|+  -|+...-...-.+.-+...+|+-+  +-.+ |
T Consensus        96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G  172 (412)
T PF00815_consen   96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G  172 (412)
T ss_dssp             TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred             CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence            355556778999988888885 344433 34557899999976544  444432222333344456667633  2222 3


Q ss_pred             CchhHHHHHH----cCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCc-eeEcCCCCHHHHHHHHHHHHhhhc
Q 018922          225 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLIFDDVDVNTAADMALLGILFNK  299 (349)
Q Consensus       225 ~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~-~iV~~dad~~~a~~~i~~~~~~~~  299 (349)
                       |.....+|.    +-|.||.|+-.|..=+..+=..-...   .-+=+--|...- +|-+++||.+..+..++.-+=+..
T Consensus       173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~---V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~  248 (412)
T PF00815_consen  173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD---VGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHDP  248 (412)
T ss_dssp             -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS----EES------EEEEEE-TTS-HHHHHHHHHHHHTT-T
T ss_pred             -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC---cccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccCC
Confidence             333333444    24899999999986654332111111   111111122223 334557899999888877665544


Q ss_pred             CCCcccCceEEEecc--cHHHHHHHHHHHhhccc
Q 018922          300 GEICVASSRVYVQEG--IYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       300 GQ~C~a~~~v~V~~~--~~~~f~~~l~~~~~~l~  331 (349)
                      .     .+.++|..+  +.+++.+.+.+.+..+.
T Consensus       249 ~-----a~~vLvt~s~~la~~V~~~v~~~l~~l~  277 (412)
T PF00815_consen  249 D-----AQAVLVTTSEELAEAVEAEVERQLEELP  277 (412)
T ss_dssp             T------EEEEEES-HHHHHHHHHHHHHHHTT-T
T ss_pred             C-----CceEEEECCHHHHHHHHHHHHHHHHhCC
Confidence            3     345566444  66777777777766543

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]

Probab=88.25  E-value=26  Score=33.92  Aligned_cols=193  Identities=22%  Similarity=0.282  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcC---CCccHHhhHHHHHhHHhcCCeEE--EecCCC
Q 018922          123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMI--VKPAEQ  197 (349)
Q Consensus       123 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~~~~AL~aGN~vv--lkps~~  197 (349)
                      ++.+.+.++.|.+.... .........+.....++.|+--|++..|   .-||-..++ ..+||-.+|+.=|  .-|+..
T Consensus        81 i~~A~~~I~~fH~~Q~p-~~~~~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~  158 (425)
T COG0141          81 LEVAAENIEAFHEAQLP-KDWLVETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPK  158 (425)
T ss_pred             HHHHHHHHHHHHHhhCC-CccceeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCC
Confidence            44455555554433222 1111122335556678899998888888   455555444 4789999998644  345554


Q ss_pred             ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC----CCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCC
Q 018922          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH----MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK  273 (349)
Q Consensus       198 ~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~----~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~  273 (349)
                      .- .+-.+.-+...+|+-+ +++ + | |.....+|.-.    |.||.|.-.|+.=+..+  +.... +..-+=+.-|-.
T Consensus       159 ~g-v~p~iL~AA~~~Gv~e-Iy~-v-G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~-g~V~ID~~AGPS  230 (425)
T COG0141         159 DG-VNPEILAAARLAGVDE-VYK-V-G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS-GVVGIDMIAGPS  230 (425)
T ss_pred             CC-CCHHHHHHHHHhCcHH-HHH-c-c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh-CCcccCCCCCCc
Confidence            22 1222222234444432 111 1 2 33444455543    88999998888655332  11111 122222222444


Q ss_pred             CceeEcC-CCCHHHHHHHHHHHHhhhcCCCcccCceEEEecc--cHHHHHHHHHHHhhcc
Q 018922          274 SPLLIFD-DVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW  330 (349)
Q Consensus       274 ~~~iV~~-dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--~~~~f~~~l~~~~~~l  330 (349)
                      .-+||-+ ++|.+.++..++.-+=+...     .+.|+|..+  +.++..+.+.+.+..+
T Consensus       231 EvlViAD~ta~p~~vA~DLLsQAEHd~~-----a~aiLvT~s~~la~~v~~~v~~~l~~l  285 (425)
T COG0141         231 EVLVIADETANPDFVAADLLSQAEHDPD-----AQAILVTDSEELAEAVEAAVERQLETL  285 (425)
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHhhcCCC-----ceEEEEeCcHHHHHHHHHHHHHHHHhc
Confidence            4444444 48999998888776654433     556677555  5666666666666554

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=88.14  E-value=6.1  Score=39.38  Aligned_cols=108  Identities=19%  Similarity=0.219  Sum_probs=73.1

Q ss_pred             eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 018922          146 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF  225 (349)
Q Consensus       146 ~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~  225 (349)
                      +...+..+.....|.|-|+++   +-+....+.+++..|++||.+++-+...       ++..+.  .+|.++-..+.-.
T Consensus       630 pGptGErN~~~l~pr~rvl~~---~~~~~~~~~ql~a~la~G~~~v~~~~~~-------~aa~~~--~l~~~v~~~~~~~  697 (769)
T COG4230         630 PGPTGERNTYTLHPRGRVLCV---AGDEQDLLTQLAAVLAVGNQVVIPEDSG-------LAALLK--DLPSAVASRIQVA  697 (769)
T ss_pred             CCCcccceeecccCCccEEEe---CCCHHHHHHHHHHHHhcCCeEEecCcch-------HHHHHH--hchhhhhhheeec
Confidence            445567778889999999998   4566788889999999999999866543       222222  2566543333221


Q ss_pred             chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC
Q 018922          226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG  271 (349)
Q Consensus       226 ~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~g  271 (349)
                      +    ++ ...-.++.+.|.|.++-.+.+.+..+. .-.+++.-.+
T Consensus       698 ~----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~-~~Gpiv~~~~  737 (769)
T COG4230         698 K----DW-TADIPFDAVLFHGDSDRLRALCEAIAA-RDGPIVSVQG  737 (769)
T ss_pred             c----ch-hhccceeeEEecCCHHHHHHHHHHHhc-CCCCeEEeec
Confidence            2    12 333467899999999999999998877 3345554443

>PRK13769 histidinol dehydrogenase; Provisional

Probab=85.17  E-value=36  Score=32.48  Aligned_cols=188  Identities=19%  Similarity=0.143  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHH
Q 018922          123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA  202 (349)
Q Consensus       123 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~  202 (349)
                      +..+.+.++.|........+.. . ..+.....++.|+--|++..|.-||.. .+..++||-.+|..=|+--++-.....
T Consensus        59 i~~a~~~I~~fh~~q~~~~~~~-~-~~Gv~~g~~~~Pi~rvG~YVPa~~pSt-vLM~~iPAkvAGV~~Iv~~TPp~~i~p  135 (368)
T PRK13769         59 ALEAAKSLEALYSRLKPPEAVD-F-YGGVLRSVFWKPVRRAALYVPARYVST-LVMLAVPARAAGVEEIYVVTPPRGVTG  135 (368)
T ss_pred             HHHHHHHHHHHHHHhCCCCeEe-c-CCCeEEEEEEeeeeeeEEEeccchHHH-HHHhhccHhhcCCCeEEEeCCCCCCCH
Confidence            3444555555554332222211 1 234445667899999999999655543 455578999999875543222111222


Q ss_pred             HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCC
Q 018922          203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV  282 (349)
Q Consensus       203 ~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~da  282 (349)
                      ..|+ +...+|+-+  +--+ | |...-.++...-.||.|+-.|..=+..+=....   ...-+=+--|-..-+||-+++
T Consensus       136 ~vL~-aa~~~Gv~e--Iy~v-G-GAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~---g~V~ID~~AGPSEvlViAD~a  207 (368)
T PRK13769        136 ELLA-VAKELGVKG--VLAI-G-GPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLS---QYVGIDGIEGPTELVVYAEGV  207 (368)
T ss_pred             HHHH-HHHHcCCCe--eecc-c-CHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHh---CCcCCCCcCCCcceEEEcCCC
Confidence            3333 446666543  2222 3 333334666555899999888865543311111   111121223556667777779


Q ss_pred             CHHHHHHHHHHHHhhhcCCCcccCceEEEecc--cHHHHHHHHHHH
Q 018922          283 DVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEK  326 (349)
Q Consensus       283 d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--~~~~f~~~l~~~  326 (349)
                      |.+.++..++.-+=+...     .+.++|..+  +.+++.+.+.+.
T Consensus       208 ~p~~vAaDLLaQAEH~~~-----a~~iLvT~s~~la~~V~~~v~~~  248 (368)
T PRK13769        208 PPEVAVRGALAQLEHGPT-----SFAYLLSTDAELLKAAEEIYRRE  248 (368)
T ss_pred             CHHHHHHHHHHHhhcCCC-----CcEEEEECCHHHHHHHHHHHHHH
Confidence            999888777765533322     445566444  445555554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	349
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		2e-97
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		2e-93
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		8e-93
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		8e-93
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		8e-93
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		8e-93
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		3e-92
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		4e-92
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-91
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		1e-91
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		2e-91
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		4e-91
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-90
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		5e-75
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		1e-74
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		3e-74
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		8e-74
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		1e-73
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		5e-73
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		8e-65
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		1e-64
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		7e-64
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-63
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		1e-63
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-63
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		1e-59
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		1e-56
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-56
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		4e-56
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		5e-56
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		5e-56
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-55
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		4e-54
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		4e-54
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		9e-54
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		3e-51
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		9e-51
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		2e-49
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		4e-48
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		1e-47
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		6e-47
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		9e-46
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		2e-45
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		5e-45
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-44
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		1e-44
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-44
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		4e-44
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		2e-43
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		3e-42
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		6e-37
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		9e-37
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		2e-36
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		4e-34
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		1e-33
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		3e-33
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		3e-33
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		8e-33
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		9e-33
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		9e-33
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		4e-31
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-28
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		4e-26
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		1e-25
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		2e-25
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		5e-25
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		2e-24
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		2e-24
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		2e-24
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		3e-24
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		3e-23
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		3e-23
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		4e-23
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		6e-22
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		8e-22
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		9e-22
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		2e-21
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		2e-20
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		7e-19
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		5e-18
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		7e-17
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		5e-14
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-13
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		5e-13
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-12
2y51_A	534	Crystal Structure Of E167a Mutant Of The Box Pathwa		6e-11
2y53_A	534	Crystal Structure Of E257q Mutant Of The Box Pathwa		6e-11
2vro_A	532	Crystal Structure Of Aldehyde Dehydrogenase From Bu		7e-11
2y52_A	534	Crystal Structure Of E496a Mutant Of The Box Pathwa		7e-11
2y5d_A	534	Crystal Structure Of C296a Mutant Of The Box Pathwa		1e-09
3my7_A	452	The Crystal Structure Of The Acdh Domain Of An Alco		2e-06
1eyy_A	510	Crystal Structure Of The Nadp+ Dependent Aldehyde D		1e-05
3v4c_A	528	Crystal Structure Of A Semialdehyde Dehydrogenase F		2e-04

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 173/330 (52%), Positives = 224/330 (67%), Gaps = 1/330 (0%)
Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G P
Sbjct: 17  QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG 
Sbjct: 77  WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK VSLELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  338 bits (868), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 169/330 (51%), Positives = 218/330 (66%), Gaps = 1/330 (0%)
Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP- 76
           EIK+TK+FIN E+ +S SG+ F   +P TGE +  + E DK D+D AV+AAR AF  G  
Sbjct: 15  EIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSV 74
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
           W R   +ER  ++ K AD                 GK    A   D+ G   TLRYYAG 
Sbjct: 75  WRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGW 134
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKIHG  + +      +T  EPIGV G IIPWNFP  MF  K++PAL  G T+++KPAE
Sbjct: 135 ADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAE 194
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL ALY   L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +
Sbjct: 195 QTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQE 254
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AA  SNLK V+LELGGKSP +IF D D++ A + A  G+ FN+G+ C A SR++V+E IY
Sbjct: 255 AAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIY 314
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +EF K+ VE+AK  +VG PFDP   QGPQ+
Sbjct: 315 EEFVKRSVERAKRRIVGSPFDPTTEQGPQI 344

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  337 bits (863), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 220/333 (66%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  337 bits (863), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 220/333 (66%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  337 bits (863), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 220/333 (66%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  337 bits (863), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 220/333 (66%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 7   QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 67  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 306
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 339

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  335 bits (858), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 220/333 (66%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+L+LGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  334 bits (857), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 219/333 (65%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+F GST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  333 bits (853), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 219/333 (65%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+   A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  332 bits (852), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 219/333 (65%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+   A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 170/333 (51%), Positives = 219/333 (65%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+   A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  331 bits (848), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 165/330 (50%), Positives = 218/330 (66%), Gaps = 1/330 (0%)
Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
           +I+ TKLFIN E+ +SVSGKTF   +P T E I  + E DKEDVD AVKAAR+AF  G P
Sbjct: 17  KIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSP 76
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
           W     +ER  ++ K AD                 GK+ + A + D+      LRY AG 
Sbjct: 77  WRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADKI G  + +      YT  EPIGV G I PWN P  +   K+ PAL  G T+IVKPAE
Sbjct: 137 ADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
           AAA SNLK V+LELG K+P ++F D D+++A + A  G+  N+G+ C+A+S+++V+E IY
Sbjct: 257 AAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF ++ VE+AK +V G+P  P V  GPQ+
Sbjct: 317 DEFVQRSVERAKKYVFGNPLTPGVNHGPQI 346

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  329 bits (844), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 168/333 (50%), Positives = 217/333 (65%), Gaps = 1/333 (0%)
Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+ + ++FIN E+ D+VS KTF T++P TG+ I  +AEGDK DVD AVKAAR AF  
Sbjct: 12  QQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQL 71
Query: 75  G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   +ER  ++ + AD                 GK +  + + D+      LRYY
Sbjct: 72  GSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYY 131
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 132 AGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 191
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+NV+PGFGPTAGAAIASH D+DKV+FTGST+VG  
Sbjct: 192 VAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHL 251
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA  SNLK V+LE+GGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE
Sbjct: 252 IQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 311
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IY EF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 312 DIYAEFVERSVARAKSRVVGNPFDSRTEQGPQV 344

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  277 bits (709), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 206/339 (60%), Gaps = 8/339 (2%)
Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
           K   +MP     +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++
Sbjct: 30  KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71  AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
           AF++G W + +  +R  ++ + AD                 G +++ A    +  +  T 
Sbjct: 86  AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
           RY+AG  DKI G  + +++A     L    +EP+GV G +IPWN+P  M   K +  LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
           G T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            R++V+E I+++F +K+VE+ +   +G+P +     GPQ
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  276 bits (707), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 206/339 (60%), Gaps = 8/339 (2%)
Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
           K   +MP     +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++
Sbjct: 30  KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71  AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
           AF++G W + +  +R  ++ + AD                 G +++ A    +  +  T 
Sbjct: 86  AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
           RY+AG  DKI G  + +++A     L    +EP+GV G +IPWN+P  M   K +  LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
           G T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST+VG+ +M++ A SN+K VSL+LGGKSPL+IF D D+N A  M +  + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            R++V+E I+++F +K+VE+ +   +G+P +     GPQ
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 205/339 (60%), Gaps = 8/339 (2%)
Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
           K   +MP     +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++
Sbjct: 30  KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71  AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
           AF++G W + +  +R  ++ + AD                 G +++ A    +  +  T 
Sbjct: 86  AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
           RY+AG  DKI G  + +++A     L    +EP+GV G +IPWN+P  M   K +  LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
           G T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST+VG+ +M++ A SN+K VSL LGGKSPL+IF D D+N A  M +  + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            R++V+E I+++F +K+VE+ +   +G+P +     GPQ
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score =  273 bits (699), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 205/339 (60%), Gaps = 8/339 (2%)
Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
           K   +MP     +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++
Sbjct: 30  KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71  AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
           AF++G W + +  +R  ++ + AD                 G +++ A    +  +  T 
Sbjct: 86  AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
           RY+AG  DKI G  + +++A     L    +EP+GV G +IPWN+P  M   K +  LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
           G T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE  +A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            R++V+E I+++F +K+VE+ +   +G+P +     GPQ
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 135/339 (39%), Positives = 205/339 (60%), Gaps = 8/339 (2%)
Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
           K   +MP     +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++
Sbjct: 30  KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71  AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
           AF++G W + +  +R  ++ + AD                 G +++ A    +  +  T 
Sbjct: 86  AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
           RY+AG  DKI G  + +++A     L    +EP+GV G +IPWN+P  M   K +  LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
           G T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE  +A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            R++V+E I+++F +K+VE+ +   +G+P +     GPQ
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  271 bits (692), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 134/339 (39%), Positives = 204/339 (60%), Gaps = 8/339 (2%)
Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
           K   +MP     +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++
Sbjct: 30  KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71  AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
           AF++G W + +  +R  ++ + AD                 G +++ A    +  +  T 
Sbjct: 86  AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
           RY+AG  DKI G  + +++A     L    +EP+GV G +IPWN+P  M   K +  LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
           G T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST+VG+ +M++ A SN+K VSL LGGKSPL+IF D D+N A  M +  + FNKGE  +A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            R++V+E I+++F +K+VE+ +   +G+P +     GPQ
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQ 364

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  243 bits (621), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 188/331 (56%), Gaps = 2/331 (0%)
Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M   +  KL+I G +V++ SG TFETI+P  GE +A++    +EDV+ AV++A +     
Sbjct: 1   MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76  PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
            W   +  +R  I+ +  D                 GK  +  +  DI   A+ L YYAG
Sbjct: 59  VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
               I GE + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           E TPL AL  A +   AGVPDGV NV+ G G   G  +  H  I+K+SFTG T  G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
            +A++S+LK V++ELGGKSPL+IF D D++ AAD+A++   F+ G++C   +RV++    
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              FE K++E+ +   +GDP D     GP V
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLV 329

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 186/324 (57%), Gaps = 2/324 (0%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           KL+I G +V++ SG TFETI+P  GE +A++    +EDV+ AV++A +      W   + 
Sbjct: 7   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
            +R  I+ +  D                 GK  +  +  DI   A+ L YYAG    I G
Sbjct: 65  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
           E + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL A
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           L  A +   AGVPDGV NV+ G G   G  +  H  I+K+SFTG T  G++VM +A++S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           LK V++ELGGKSPL+IF D D++ AAD+A++   F+ G++C   +RV++       FE K
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
           ++E+ +   +GDP D     GP V
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLV 328

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  240 bits (613), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 185/324 (57%), Gaps = 2/324 (0%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           KL+I G +V++ SG TFETI+P  GE +A++    +EDV+ AV++A +      W   + 
Sbjct: 7   KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
            +R  I+ +  D                 GK  +  +  DI   A+ L YYAG    I G
Sbjct: 65  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
           E + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+E TPL A
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           L  A +   AGVPDGV NV+ G G   G  +  H  I+K+SFTG T  G++VM +A++S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           LK V++ LGGKSPL+IF D D++ AAD+A++   F+ G++C   +RV++       FE K
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
           ++E+ +   +GDP D     GP V
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLV 328

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  240 bits (612), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 187/331 (56%), Gaps = 2/331 (0%)
Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M   +  KL+I G +V++ SG TFETI+P  GE +A++    +EDV+ AV++A +     
Sbjct: 1   MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76  PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
            W   +  +R  I+ +  D                 GK  +  +  DI   A+ L YYAG
Sbjct: 59  VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
               I GE + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           E TPL AL  A +   AGVPDGV NV+ G G   G  +  H  I+K+SFTG T  G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
            +A++S+LK V++ELGGKSPL+IF D D++ AAD+A++   F+ G++    +RV++    
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              FE K++E+ +   +GDP D     GP V
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLV 329

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 187/329 (56%), Gaps = 8/329 (2%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           +LFI+GE+ + +       I+P T E I  I     EDV++AV AAR+AF    W   SG
Sbjct: 9   QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
           A R   +   A                  GK    A + DI   A+   Y+AG A+ + G
Sbjct: 69  AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDG 127
Query: 143 E-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
           +      L M R  + + LR+P+GVVG I PWN+P  M   K++PALAAGCT ++KP+E 
Sbjct: 128 KQKAPVTLPMER-FKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 186
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
             +  L F  +    G+P GVLN++ G GP AGA + SH D+DK++FTGS+  G +VM A
Sbjct: 187 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM-A 245
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           +A   +KPV+LELGGKSP+++F+DVD++   +  + G  +  G+IC A+SR+ V E I  
Sbjct: 246 SAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAA 305
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           EF  KLV+  K   + DPF+   R GP +
Sbjct: 306 EFVDKLVKWTKNIKISDPFEEGCRLGPVI 334

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 187/331 (56%), Gaps = 2/331 (0%)
Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M   +  KL+I G +V++ SG TFETI+P  GE +A++    +EDV+ AV++A +     
Sbjct: 1   MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76  PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
            W   +  +R  I+ +  D                 GK  +  +  DI   A+ L YYAG
Sbjct: 59  VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
               I GE + +      YT REP+GVV  I  WN+P  +   K +PALAAG  MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           E TPL AL  A +   AGVPDGV NV+ G G   G  +  H  I+K+SFTG T  G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
            +A++S+LK V++ELGGKSPL+IF D D++ AAD+A++   F+ G++    +RV++    
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              FE K++E+ +   +GDP D     GP V
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLV 329

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 189/328 (57%), Gaps = 9/328 (2%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           + +I+GE+V+S +  T + I+P   E I  ++EG KED + A+ AAR+AF+ G W + + 
Sbjct: 34  RQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQET- 92
Query: 83  AERRGIMLK-FADXXXXXXXXXXXXXXXXXGKL--HSWAKMGDIPGAANTLRYYAGAADK 139
           AE RG  ++  AD                 GK    S+A M DI    N   Y+AG ADK
Sbjct: 93  AETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDI---HNVFMYFAGLADK 149
Query: 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
             GE++       +   ++EP+GVV  I PWN+P      K++PALA GC++++KP+E T
Sbjct: 150 DGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEIT 209
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
           PL  +    L +  G P G +N++ G G   G  ++ H ++D VSFTG  + G+ +M+ A
Sbjct: 210 PLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA 269
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
           A +N+  ++LELGGK+P +IFDD D   A D AL G  F+ G++C A SR+ VQ  I D+
Sbjct: 270 A-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           FE+ L+++ K   +G+ FD     GP +
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVI 356

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 182/323 (56%), Gaps = 5/323 (1%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
            INGE++D+ +G+  +  +P  G+ +  + +   ++   A+ AA +A     W   +  E
Sbjct: 13  LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 85  RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+  + +                 GK  + AK G+I  AA+ + ++A    +I+G+ 
Sbjct: 71  RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT 129
Query: 145 LKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           +   +A +    +++PIGV   I PWNFP  M   K  PALAAGCTM++KPA QTP  AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A LA  AGVP GV NVV G     G  + S+  + K+SFTGST++GRQ+M+  A  ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDI 248
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K VSLELGG +P ++FDD D++ A + AL     N G+ CV ++R+YVQ+G+YD F +KL
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
            +      +GD  D  V  GP +
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLI 331

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 182/323 (56%), Gaps = 5/323 (1%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
            INGE++D+ +G+  +  +P  G+ +  + +   ++   A+ AA +A     W   +  E
Sbjct: 13  LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 85  RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  I+  + +                 GK  + AK G+I  AA+ + ++A    +I+G+ 
Sbjct: 71  RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT 129
Query: 145 LKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           +   +A +    +++PIGV   I PWNFP  M   K  PALAAGCTM++KPA QTP  AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A LA  AGVP GV NVV G     G  + S+  + K+SFTGST++GRQ+M+  A  ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDI 248
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K VSLELGG +P ++FDD D++ A + AL     N G+ CV ++R+YVQ+G+YD F +KL
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
            +      +GD  D  V  GP +
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLI 331

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  215 bits (547), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 183/331 (55%), Gaps = 11/331 (3%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           +L+I GE+ + V       I+P T E I  I     EDVD+AV+AAR+A     W   +G
Sbjct: 25  QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYAGAADKI 140
           A+R   +   A                  GK    S A M D+ G      YYAG A+ +
Sbjct: 85  AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGC---FEYYAGLAEAL 141
Query: 141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
               +      S + + Y LREP+GVVG I PWN+P  M   KV+PALAAGC  I+KP+E
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
              +  L    + +  G+P G LN++ G GP AG  +ASH  +DK+SFTGS   G ++M 
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVD-VNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           AAA   +KPVSLELGGKSP+++FDD+D ++ AA+  L GI  N G++C A+SR+ VQE I
Sbjct: 262 AAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              F  +L++  K   + DP +   + GP V
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVV 351

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  214 bits (545), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 179/323 (55%), Gaps = 5/323 (1%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FI GEFV S SG+TF ++DP T E +   A G + +VD A KAA +AF    W R    E
Sbjct: 30  FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAKE 87
Query: 85  RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGE 143
           R+  +L+ A+                 G++    +   +  AA    +YA  A+  +   
Sbjct: 88  RKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDR 146
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
              + R    YT+R P G VG I PWN P  +   +++PALA G T+++KPAE +P  A 
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A + K A +P GV N+V GFG  AGAA+ +H  +  ++ TG T+ G+ VM+ AA  +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K +S ELGGKSP L+F D D+  A D  +  I    GE C ASSR+ V+E I+++F  K+
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
           VE+A+A  VG P DP    GP +
Sbjct: 326 VERARAIRVGHPLDPETEVGPLI 348

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  214 bits (545), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 183/336 (54%), Gaps = 11/336 (3%)
Query: 19  IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-- 76
           I   +LFING++   V  K    I+P T   I  I    KEDVD+AV AA+ A       
Sbjct: 5   IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGA 64
Query: 77  -WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
            W   SGA R   +   A                  GK    A   DI   A    YYA 
Sbjct: 65  DWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYAD 123
Query: 136 AADKIHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
            A+K+         L M    + + LREPIGVVG I PWN+P  M   KV+PALAAGC  
Sbjct: 124 LAEKLDARQKAPVSLPMD-TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAA 182
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
           I+KP+E   L  L    + K  G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+  
Sbjct: 183 ILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSAT 242
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
           G ++M AAA   +KPVSLELGGKSPL++F+DVD++ AA+ A+ G  +  G+IC A+SR+ 
Sbjct: 243 GSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLI 301
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           + E I  EF  ++V+  K   + DP +   R GP V
Sbjct: 302 LHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVV 337

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 182/331 (54%), Gaps = 11/331 (3%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           +L+I GE+ + V       I+P T E I  I     EDVD+AV+AAR+A     W   +G
Sbjct: 25  QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYAGAADKI 140
           A+R   +   A                  GK    S A M D+ G      YYAG A+ +
Sbjct: 85  AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGC---FEYYAGLAEAL 141
Query: 141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
               +      S + + Y LREP+GVVG I PWN+P  M   KV+PALAAGC  I+KP+E
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
              +  L    + +  G+P G LN++ G GP AG  +ASH  +DK+SFTGS   G ++M 
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVD-VNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           AAA   +KPVSL LGGKSP+++FDD+D ++ AA+  L GI  N G++C A+SR+ VQE I
Sbjct: 262 AAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              F  +L++  K   + DP +   + GP V
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVV 351

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/334 (36%), Positives = 189/334 (56%), Gaps = 5/334 (1%)
Query: 14  FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
            K P +  ++  +NG ++D+  G T +  +P  G  I  +       +  A+ A+ +A  
Sbjct: 25  LKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS 84
Query: 74  HGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
              W   +  ER GI+ K+ D                 GK  + A+ G++  AA+ + ++
Sbjct: 85  G--WAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWF 141
Query: 134 AGAADKIHGEVLKMSRALQGYT-LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
           A  A +++G+ +   +  Q  T +R+P+GV   I PWNFP  M   K +PALAAGCTMIV
Sbjct: 142 AEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIV 201
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           +PA+ TPL AL    LA+ AG+P GVL +V G     GA + S+  + K+SFTGST+VGR
Sbjct: 202 RPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGR 261
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
            +M   A + +K +SLELGG +P ++FDD D++ A D A++    N G+ CV ++R+YVQ
Sbjct: 262 LLMAQCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQ 320
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            G+YD+F +KL  K K   VG+  +P V  GP +
Sbjct: 321 RGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMI 354

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 182/332 (54%), Gaps = 11/332 (3%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPR 79
           +LFI+GE+   +  K    I+P T   I  I    KEDVDLAV AA++A        W  
Sbjct: 9   QLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSA 68
Query: 80  FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            SG+ R   +   A                  GK    A + D+        YYAG A++
Sbjct: 69  ASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEA-LADLDDVVACFEYYAGLAEE 127
Query: 140 IHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
           +  +      L M    + Y L+EPIGVV  I PWN+P  M   K++PALAAGC  I+KP
Sbjct: 128 LDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKP 186
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
           +E   +  L    + K  G+P GVLN+V G G  AGA++ASH D+DK+SFTGS+  G ++
Sbjct: 187 SELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKI 246
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
           M  AA   +KPVSLELGGKSP+++F+DVD++  A+  + G  F  G+IC A+SR+ V E 
Sbjct: 247 MTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHES 305
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           I  EF  KLV+ A+   + DP +   R GP V
Sbjct: 306 IAVEFVDKLVKWAENIKISDPLEEGCRLGPIV 337

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  207 bits (526), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/334 (38%), Positives = 181/334 (54%), Gaps = 7/334 (2%)
Query: 19  IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG--- 75
           +   +LF++GE+     G+    ++P T   I  I  G  EDVD AV AAR A       
Sbjct: 22  VPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGR 81
Query: 76  PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWA--KMGDIPGAANTLRYY 133
            W R  GA R   +   A                  GK +  A   M D+ G        
Sbjct: 82  DWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQ 141
Query: 134 AGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
           A A DK     + +     + +  REPIGVVG I PWN+P  M   K++PALAAGCT ++
Sbjct: 142 AEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVL 201
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           KP+E   +  L  A + K  G+P GVLN+V G GP AGA +++H D+DKV+FTGS + G+
Sbjct: 202 KPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGK 261
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
           ++M A+A   +KPV+LELGGKSP+++FDDVD++ A +  L G  +  G+IC A+SR+ + 
Sbjct: 262 KIM-ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIH 320
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             I  +F +++V  AK   V DP +   R GP V
Sbjct: 321 TKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVV 354

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/326 (38%), Positives = 186/326 (57%), Gaps = 4/326 (1%)
Query: 23  KLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           +  ++G+ VD+ SG T + + P   GE +    E   +DV  AV AAR+AFD GPWPR S
Sbjct: 24  QXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRXS 83
Query: 82  GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
           GAER  +  K AD                 GK  + A+ G+I   A+   Y AG A  + 
Sbjct: 84  GAERSRLXFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALE 142
Query: 142 GEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           G+    +     G  LREP+GVVG I PWNFP  +   +V  A+ +GCT+++KP+E T  
Sbjct: 143 GQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSG 202
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            ++  A LA+ AG+PDGV NVV G+G  AG  +A   ++D V+FTGS  VG ++ + AA 
Sbjct: 203 TSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAAR 262
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
           + +K V LELGGK P ++F D D++ AAD    G+  N G+ C++ SR+ VQEGI D   
Sbjct: 263 T-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALX 321
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQV 346
           ++L++ ++    GDP +   + G  +
Sbjct: 322 ERLLDISRKVAFGDPLNERTKIGAXI 347

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  197 bits (500), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 25  FINGEFVDSVSGKTFETI-DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           +  G  + S  G T E + +P TG  + ++     E+VD AV++A+ A+    W + +G 
Sbjct: 23  YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGI 80
Query: 84  ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  +ML+ A                  GK  + A+  DI  A   + YYAG A  + G+
Sbjct: 81  ERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQ 139
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
            +++      YT REP+GV   I+ WN+P  +   K +PALA G  ++ KP+  TP+  +
Sbjct: 140 HIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A +   AGVP G++NVV G G   G+ +  H ++ KVSFTGS   G++VM+ +A + +
Sbjct: 200 ILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-V 257
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K V+LELGGKSPLLIF D ++  A   AL+     +G++C   +RV+VQ  I  +F +++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 324 VEKAKAWVVGDPFDPAVRQG 343
           V++ KA VVGDP     R G
Sbjct: 318 VKRTKAIVVGDPLLTETRMG 337

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 173/327 (52%), Gaps = 2/327 (0%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           ++ KLFI G++    +    E   P TGE + ++      DVD AV AAR AFD+GPWP 
Sbjct: 7   EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPS 66
Query: 80  FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
               ER  ++                      G+  +  +     G+   + Y+AGAADK
Sbjct: 67  TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
           +     +     Q    REP+GVVG I+ WN P  +   K++PAL AGCT+++KPA +TP
Sbjct: 127 VTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETP 186
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           L A   A +    G+P+GVL+VVPG G   G A+ S+ DID  +FTGS+ VGR+V + AA
Sbjct: 187 LTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
              LKP +LELGGKS  +I +DVD+  A  M +   + N G+ CV  +R+      YDE 
Sbjct: 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              +     A  VG P DPA + GP +
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLI 331

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  188 bits (477), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 174/323 (53%), Gaps = 6/323 (1%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FI+G++V+  +G  FE+I P TGE IA++       V+ A+ +A++A     W   S   
Sbjct: 18  FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRA--QKEWAAMSPMA 75
Query: 85  RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGE 143
           R  I+ + AD                 GK      + D    A+   ++ G A   ++G+
Sbjct: 76  RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
            + +      YT R P+GV   I  WN+P  +   K +PAL AG  M+ KP+E TPL AL
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A +   AG+P G+ NV+ G   T G  + +H D+ KVS TGS   GR+V  AAA  +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKV-AAAAAGHL 252
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K V++ELGGKSP+++FDD D+ +A   A+LG  ++ G++C   +RV+VQ+     F + L
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
             + +A ++GDP D A   GP V
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLV 335

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/334 (36%), Positives = 179/334 (53%), Gaps = 5/334 (1%)
Query: 14  FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
            K P +   + +I GE+  + S  TFE  DP TGE++  + +    +   A++AA+ A+ 
Sbjct: 5   MKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA 64
Query: 74  HGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
              W   +  ER  I+ ++ D                 GK  + AK G+I  AA+ + ++
Sbjct: 65  G--WRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWF 121
Query: 134 AGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
           A    ++ G+ L    A +    ++EPIGV   I PWNFP  M   KV PALAAGC ++V
Sbjct: 122 AEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVV 181
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           KPAE TP  AL  A LA+ AGVP GVL+VV G     G  I S+  + K+SFTGST VGR
Sbjct: 182 KPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGR 241
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
            +M  +A + +K ++LELGG +P ++FDD D++ A + A+     N G+ CV ++R +V 
Sbjct: 242 LLMAQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVH 300
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           E +YD F  KL        VG   +     GP +
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLI 334

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  184 bits (467), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 168/324 (51%), Gaps = 7/324 (2%)
Query: 21  FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
           +TK +INGE+V+S S +T E I+P T E I ++A+G+K DVD AV+AA   +    +   
Sbjct: 7   YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRHT 64
Query: 81  SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
           S  ER+ ++ K                    G   S ++          L ++  A D +
Sbjct: 65  SVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXG---LNHFVAARDAL 121
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
                +  R      ++E IGV G I PWNFPT    +K++ A AAG  +++KP+E+TP 
Sbjct: 122 DNYEFEERRG-DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            A+  A +    GVP GV N+V G G   G  ++ H  +   SFTGS   G ++ + AA 
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA- 239
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
            + K VSLELGGKSP ++ DDVD+  AA      ++ N G++C A +RV V   I D F 
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFL 299
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGP 344
            +L E+     VG+P +   + GP
Sbjct: 300 AELKEQFSQVRVGNPREDGTQVGP 323

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  180 bits (457), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 165/322 (51%), Gaps = 5/322 (1%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FI G++V S    T + + P TG+ I  I  G K D + A++ A+ A       + +   
Sbjct: 16  FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWA--KLTART 73
Query: 85  RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R+ ++  FA+                 GKL S A+M ++   A  + Y    A  I G++
Sbjct: 74  RQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDI 132
Query: 145 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           L      +  Y  + P GVV  I  WNFP  +   K+ PAL  G TM++KP ++TPL   
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
               +AK AG+PDGVLNV+ G G   G  +        ++ TGST  G+Q+ + +A   +
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYM 251
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
            PV LELGGK+P+++ DD D++ AA+ AL G   N G++C    R+YV   +YDEF  K 
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 324 VEKAKAWVVGDPFDPAVRQGPQ 345
           +   K   VGDP D   + GP+
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPK 333

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/330 (36%), Positives = 178/330 (53%), Gaps = 11/330 (3%)
Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           T  F+ G ++ + +  TF   DP +G A+  +A+    +   AV+AA +AF    W   S
Sbjct: 13  TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 82  GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             ER  ++ K+ +                 GK    A  G+I  +A  L +++  A +++
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127
Query: 142 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           G+++   ++  +   L++PIGV   I PWNFP+ M   KV  ALAAGCT++VKPAE TP 
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQA 257
            AL  A LA  AG+P GV NV+P     A   G AI +   + K+SFTGST  G+ ++  
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           AA S +K VS+ELGG +P ++FD  +V+ A   A+     N G+ CV S++  VQ GI+D
Sbjct: 248 AANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 318 EFEKKLVEKAKAWV-VGDPFDPAVRQGPQV 346
            F K   E  K  + VG+ F+    QGP +
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLI 336

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  178 bits (451), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 177/337 (52%), Gaps = 12/337 (3%)
Query: 12  SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA 71
           SL+K   +   KL INGE V S  G+     +P TG+ +  IAE   E VD AV+AA  A
Sbjct: 14  SLYKKAGLMQHKLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAA 72
Query: 72  FDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGK-LHSWAKMGDIPGAANTL 130
           F    W + +   R   +LK AD                 GK LHS A   +IP   +  
Sbjct: 73  FAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHS-AFNDEIPAIVDVF 129
Query: 131 RYYAGAADKIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
           R++AGAA  ++G  L     L+G+T    R+P+GVV  I PWN+P  M   K++PALAAG
Sbjct: 130 RFFAGAARCLNG--LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAG 187
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
             +++KP+E TPL AL  A LAK    P GV+N++ G G T G  +  H  +  VS TGS
Sbjct: 188 NCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 307
              G  ++   A+S +K   +ELGGK+P+++FDD D+    +       +N G+ C A+ 
Sbjct: 247 IATGEHIISHTASS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAAC 305
Query: 308 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           R+Y Q+GIYD   +KL         G P D +   GP
Sbjct: 306 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGP 342

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 163/313 (52%), Gaps = 5/313 (1%)
Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           ++I+G+FV        + ++P T   I+RI +G  ED   A+ AA +A     W      
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84  ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER   + K +                  GK+   A++ ++   A+ + Y A  A +  GE
Sbjct: 67  ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
           +++  R  +   L +  +GV   I+PWNFP  +   K++PAL  G T+++KP+E TP  A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           + FA +    G+P GV N+V G G T G  +A +  +  VS TGS   G ++M A A  N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           +  V LELGGK+P ++ DD D+  A    +   + N G++C  + RVYVQ+GIYD+F  +
Sbjct: 245 ITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDP 335
           L E  +A   G+P
Sbjct: 305 LGEAMQAVQFGNP 317

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 163/313 (52%), Gaps = 5/313 (1%)
Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           ++I+G+FV        + ++P T   I+RI +G  ED   A+ AA +A     W      
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84  ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER   + K +                  GK+   A++ ++   A+ + Y A  A +  GE
Sbjct: 67  ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
           +++  R  +   L +  +GV   I+PWNFP  +   K++PAL  G T+++KP+E TP  A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           + FA +    G+P GV N+V G G T G  +A +  +  VS TGS   G ++M A A  N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           +  V LELGGK+P ++ DD D+  A    +   + N G++C  + RVYVQ+GIYD+F  +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDP 335
           L E  +A   G+P
Sbjct: 305 LGEAMQAVQFGNP 317

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 163/313 (52%), Gaps = 5/313 (1%)
Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           ++I+G+FV        + ++P T   I+RI +G  ED   A+ AA +A     W      
Sbjct: 9   MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84  ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER   + K +                  GK+   A++ ++   A+ + Y A  A +  GE
Sbjct: 67  ERASWLRKISAGIRERATEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
           +++  R  +   L +  +GV   I+PWNFP  +   K++PAL  G T+++KP+E TP  A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           + FA +    G+P GV N+V G G T G  +A +  +  VS TGS   G ++M A A  N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           +  V LELGGK+P ++ DD D+  A    +   + N G++C  + RVYVQ+GIYD+F  +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDP 335
           L E  +A   G+P
Sbjct: 305 LGEAMQAVQFGNP 317

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 177/330 (53%), Gaps = 11/330 (3%)
Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           T  F+ G ++ + +  TF   DP +G A+  +A+    +   AV+AA +AF    W   S
Sbjct: 13  TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 82  GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             ER  ++ K+ +                 GK    A  G+I  +A  L +++  A +++
Sbjct: 69  AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127
Query: 142 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           G+++   ++  +   L++PIGV   I PWNFP+ M   KV  ALAAGCT++VKPAE TP 
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQA 257
            AL  A LA  AG+P GV NV+P     A   G AI +   + K+SFTGST  G+ ++  
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           AA S +K VS+ELGG +P ++FD  +V+ A   A+     N G+  V S++  VQ GI+D
Sbjct: 248 AANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHD 306
Query: 318 EFEKKLVEKAKAWV-VGDPFDPAVRQGPQV 346
            F K   E  K  + VG+ F+    QGP +
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLI 336

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 160/307 (52%), Gaps = 12/307 (3%)
Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           T+L I   F      +    ++PRTG  I  +AE     +D AV AA +AF    W + +
Sbjct: 26  TQLLIGSRFEAGTEAEE-HILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 82  GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
            AER   +LK AD                 GK  +  K  ++P   +  R++AGA   +H
Sbjct: 83  PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 142 GEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
                    L G+T    R+PIG+VG I PWN+P      K++PA+  G T++ KP+EQT
Sbjct: 143 APA--AGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQT 200
Query: 199 PLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
           PL AL  A L  +A + P+GV+NV+ G G T G A+ +H  +  VS TG    G++V+ A
Sbjct: 201 PLTALKLARL--IADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           AA + +K   LELGGK+P++++ D D+    +       +N G+ C A+ R+Y + GIY+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 318 EFEKKLV 324
           +    L 
Sbjct: 318 KLVADLT 324

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  168 bits (426), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           K +ING + D  +      IDP T EA A I+ G   D D A+ AA++AF    W   S 
Sbjct: 27  KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSP 84
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
            ER G + K  +                 G     A        ++ +R +  A  +   
Sbjct: 85  HERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSF 144
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
           +   +    Q     + IGVVG I PWN+P     +KV PAL AGCTM++KP+E  PL A
Sbjct: 145 QEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
           + FA +   A +P GV N++ G G   G+ +++H D++ +SFTGST  G+ + + A+ + 
Sbjct: 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT- 263
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
           LK V LELGGK   +IF D D++ A    +    +N G+ C A +R+ V++ IYD+  K 
Sbjct: 264 LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKT 322
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQV 346
             + A+   VG         GP V
Sbjct: 323 AKDIAEKTQVGPGHQTGNHIGPVV 346

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 164/325 (50%), Gaps = 9/325 (2%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD-HGPWPRFSGA 83
           +I G + DS  G TF+  +P TG  IA++    +EDV  AV+A + A     PWP  +  
Sbjct: 15  YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET-- 72
Query: 84  ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG 142
            RR  +    D                 GK   W +  G++  AA    Y A     +  
Sbjct: 73  -RRKWLEDIRDGLKENREEIGRILCXEHGK--PWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 143 EVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
             +        +T+   P+GV G I+PWNFP      K+S ALAAGC  ++KPA +TPL 
Sbjct: 130 HTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLT 189
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
            + F  +     +PDG +N+V G     G  +  H D+  +SFTGST+VGR+++   A  
Sbjct: 190 XIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTA-E 248
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
            +K ++LELGG +P ++FDD D+  AAD  +       G+ CV ++R++V E + D F +
Sbjct: 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQ 308
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQV 346
           KL E+     VGD  +  +  GP +
Sbjct: 309 KLAERVNKXTVGDGXNDGIDIGPLI 333

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score =  150 bits (379), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 161/330 (48%), Gaps = 6/330 (1%)
Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
           EI+  K +INGE+V+S + +  + ++P T E + ++    KED+D A + A +AF    W
Sbjct: 2   EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 78  PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
            + +   R  I+  F                   GK ++   +G++      + + AGA 
Sbjct: 60  SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGK-NTKEALGEVGRGIENVEFAAGAP 118
Query: 138 DKIHGEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             + G+ L  ++  ++    R PIGVVG I P+NFP  +       A+A G T I+KP+E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           +TPL+      L + AG+P GV NVV G        I  H +I  +SF GS  VG  V +
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVN-GILEHPEIKAISFVGSKPVGEYVYK 237
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
              + NLK V    G K+  ++ +D ++       +     + GE C+A + V V+EGI 
Sbjct: 238 -KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIA 296
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DEF  KL EK     +G+  D  V  GP +
Sbjct: 297 DEFMAKLQEKVADIKIGNGLDDGVFLGPVI 326

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 163/331 (49%), Gaps = 6/331 (1%)
Query: 19  IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
           I  TK  I G++V+  S +    I+P     IA   +    DVD A +AA++A     W 
Sbjct: 10  IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKA--QAEWA 67
Query: 79  RFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAAD 138
               AER  I+ + A+                 G   S A + +I  A N  +  A    
Sbjct: 68  ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPG 126
Query: 139 KIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
           ++HG +   +    +    R   GVVG I PWNFP  +    V+PALA G  +++KPA  
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 198 TPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           TP+   +  A + + AGVP GV++ V G G   G    +H     +SFTGST VGR+V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 257 AAATSN-LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
            A     +K V+LELGG +P ++  D D++ AA  A +G   ++G+IC++ +RV V   +
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +DEF +K VE  K    GDP       GP +
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVI 337

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  142 bits (357), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           K  K ++NGE+   +S    +  +P +G  +  +     E+VD    +A++A     W  
Sbjct: 3   KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80  FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            S  ER   + K AD                  K +  A + ++   A  + Y A    +
Sbjct: 59  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           + GEVL+       S+       REP+G+V  I P+N+P  +   K++PAL AG  +  K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           P  Q  +  L  A     AG+P GV N + G G   G  I  H  ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           + + A    ++P+ LELGGK   ++ +D D+   A   + G     G+ C A  RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPA 339
            + DE  +K+ EK  A  +G+P D A
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA 320

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           K  K ++NGE+   +S    +  +P +G  +  +     E+VD    +A++A     W  
Sbjct: 3   KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80  FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            S  ER   + K AD                  K +  A + ++   A  + Y A    +
Sbjct: 59  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           + GEVL+       S+       REP+G+V  I P+N+P  +   K++PAL AG  +  K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           P  Q  +  L  A     AG+P GV N + G G   G  I  H  ++ ++F+GST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           + + A    ++P+ LELGGK   ++ +D D+   A   + G     G+ C A  RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPA 339
            + DE  +K+ EK  A  +G+P D A
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA 320

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 161/330 (48%), Gaps = 20/330 (6%)
Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRF 80
           +FI+G++++    +  + I+P + E I +I    +E+   A+  A   ++   + P  + 
Sbjct: 2   MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITK- 57
Query: 81  SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
               R  I++  A                  GK    A++ ++  +  T +  A    + 
Sbjct: 58  ----RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEH 112
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
             EV+     L  +T REP+G+VG I P+NFP  +   K++PA+A G  ++  P+ + PL
Sbjct: 113 RDEVIPSDDRLI-FTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPL 171
Query: 201 IALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           + +  A + + A     VP GV N++ G G   G  I  +  ++ +SFTGS+ VG  + +
Sbjct: 172 VCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK 231
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
            A     K ++LELGG +P ++  D D+N A +  + G     G++C++   + V E I 
Sbjct: 232 KAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA 288
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           D+F +  V KAK   VG+P D     GP +
Sbjct: 289 DKFIEMFVNKAKVLNVGNPLDEKTDVGPLI 318

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  139 bits (349), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 14/326 (4%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           K  K ++NGE+   +S    +  +P +G  +  +     E+VD    +A++A     W  
Sbjct: 3   KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80  FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            S  ER   + K AD                  K +  A + ++   A  + Y A    +
Sbjct: 59  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           + GEVL+       S+       REP+G+V  I P+N+P  +   K++PAL AG  +  K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           P  Q  +  L  A     AG+P GV N + G G   G  I  H  ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           + + A    ++P+ L LGGK   ++ +D D+   A   + G     G+ C A  RV V E
Sbjct: 238 IGKMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPA 339
            + DE  +K+ EK  A  +G+P D A
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA 320

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  137 bits (345), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 14/326 (4%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           K  K ++NGE+   +S    +  +P +G  +  +     E+VD    +A++A     W  
Sbjct: 3   KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80  FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            S  ER   + K AD                  K +  A + ++   A  + Y A    +
Sbjct: 59  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           + GEVL+       S+       REP+G+V  I P+N+P  +   K++PAL AG  +  K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           P  Q  +  L  A     AG+P GV N + G G   G  I  H  ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           + + A    ++P+ LELGGK   ++ +D D+   A   + G     G+   A  RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPA 339
            + DE  +K+ EK  A  +G+P D A
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA 320

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 160/331 (48%), Gaps = 14/331 (4%)
Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           L INGE V   +    ++ +P R  + +  +++ +++  + A+++A +AF    W   + 
Sbjct: 40  LIINGERV--TTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNP 95
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAGAADKIH 141
            ER  I++K A                  GK   W +   D   A + L YYA    +++
Sbjct: 96  EERANILVKAAAIIRRRKHEFSAWLVHEAGK--PWKEADADTAEAIDFLEYYARQMIELN 153
Query: 142 GEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
                +SR   Q      P+GV   I PWNF   +        +  G T+++KPA  TP+
Sbjct: 154 RGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPV 213
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
           +A  F  + + AG+P GV+N VPG G   G  +  H     ++FTGS DVG ++ + AA 
Sbjct: 214 VAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273
Query: 261 -----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
                ++LK V +E+GGK  +++  D D++ AA+  L+      G+ C A SR  + + +
Sbjct: 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDV 333
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           YDE  +K V  AK   VGDP +     GP +
Sbjct: 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVI 364

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 156/323 (48%), Gaps = 12/323 (3%)
Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
            +  NGE+V+S +G+      P +G A+  I    +E+V+ A++ A+ A     W     
Sbjct: 13  NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPI 70
Query: 83  AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
            ER  ++  +AD                  K    A +G++   A+ +R+ A  A +++G
Sbjct: 71  HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNG 129
Query: 143 EVLKMSRALQGYTL------REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           E LK  +   G +       REP+GVV  I P+N+P  +   K++PAL  G T++ KPA 
Sbjct: 130 ETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPAT 189
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           Q  L  +        AG P+G++ VV G G   G  +  H  ID ++FTG T  G ++ +
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
            A    + PV LELGGK P ++ DD D+   A   + G     G+ C A  RV+VQ+ + 
Sbjct: 250 KA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 317 DEFEKKLVEKAKAWVVGDPFDPA 339
           D+    + E  +   VG P D A
Sbjct: 307 DQLVANIKELVEQLTVGSPEDDA 329

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 163/340 (47%), Gaps = 29/340 (8%)
Query: 21  FTKLFINGEFVDSVSGKTFETIDPRTGEAI--ARIAEGDK-EDV-DLAVKAARQAFDHGP 76
             K FING++    SG+T + ++P     I  A +A G + ED  D+A KA ++      
Sbjct: 6   LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE------ 59
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYA 134
           W + +  +R+ ++ K                    G   + S  ++       +    Y 
Sbjct: 60  WAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYT 119
Query: 135 GAADKIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
           G      G V ++   ++G T    R P+GV+  I P+NFP  +    ++PA+A G +++
Sbjct: 120 GEL----GGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVV 175
Query: 192 VKPAEQT-----PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
            KP  QT      +IA  F H    AG+P GVLNV+       G  + ++     +SFTG
Sbjct: 176 HKPDIQTAISGGTIIAKAFEH----AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST VGR + + A  +  K ++LELGG +P  +  D DV+ A D A+ G   ++G+IC+  
Sbjct: 232 STAVGRHIGEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMII 290
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +R+ V + +YDEF +K   + K    GD  DP    GP +
Sbjct: 291 NRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLI 330

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 16/324 (4%)
Query: 34  VSGKTFET------IDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86
           + G+ +ET      I+P    E +  +++  ++  + A++AA +AF+   W      ER 
Sbjct: 42  IDGERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDPEERA 99
Query: 87  GIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVL 145
            ++ +                    GK  + A   D   A + + YYA    ++  G+ +
Sbjct: 100 AVLFRAVAKVRRKKHEFSALLVKEAGKPWNEAD-ADTAEAIDFMEYYARQMIELAKGKPV 158
Query: 146 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205
                 +   +  P GV   I PWNF   +        +  G T+++KPA   P+IA  F
Sbjct: 159 NSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKF 218
Query: 206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----T 260
             + + +G+P GV+N VPG G   G  +  H     ++FTGS +VG ++ + AA      
Sbjct: 219 VEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQ 278
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
           ++LK V  E+GGK  +++ +D D+  AA           G+ C A SR  V E +YDE  
Sbjct: 279 THLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVL 338
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGP 344
           K+++E  ++  VG+P    V  GP
Sbjct: 339 KRVIEITESKKVGEPDSADVYMGP 362

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 122/230 (53%), Gaps = 10/230 (4%)
Query: 122 DIPGAANTLRYYAGAADKIHGEVLKMSRA---LQGYTLREPIGVVGHIIPWNFPTTMFFM 178
           D+  A + L YYA    ++ G+  ++  A   L  Y   EP GV   I PWNFP  +   
Sbjct: 628 DVTEAIDFLEYYAREMIRL-GQPQRVGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMG 685
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238
             S A+  G  ++ KP+  T +I  +   L + AG+P+GV N  PG G   G  +  H D
Sbjct: 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745
Query: 239 IDKVSFTGSTDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 293
           I  ++FTGS + G ++++ AA      +N+K +  E+GGK+ ++I DD D++ A    L 
Sbjct: 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLY 805
Query: 294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQG 343
                +G+ C A SRV V + +YD+F ++LV  AKA  VG   DPA   G
Sbjct: 806 SAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMG 855

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 35  SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD 94
           SG+   +  P   E IAR+ +    + +  V+  R+A+    W      +R  I+ +  D
Sbjct: 33  SGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRGEIVRQIGD 90
Query: 95  XXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY 154
                            GK++    +G++    +   Y  G +  I G VL   R   G+
Sbjct: 91  ALRKKIKVLGSLVSLEMGKIYV-EGVGEVQEYVDVCDYAVGLSRMIGGPVLPSERP--GH 147
Query: 155 TLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAH 207
            L E   P+G+VG I  +NFP  ++    + AL  G   + K A  TPL ++      A 
Sbjct: 148 ALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAE 207
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
           + +   +P  + ++  G G   G A+A    +D +SFTGST VG+ V         + + 
Sbjct: 208 VLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKL- 265
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
           LELGG + +++F+D D+N     A+   +   G+ C  + R+ + E ++D   +++ +  
Sbjct: 266 LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAY 325
Query: 328 KAWVVGDPFDPAVRQGP 344
           K   +GDP+DP+   GP
Sbjct: 326 KQVRIGDPWDPSTLYGP 342

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 118/235 (50%), Gaps = 13/235 (5%)
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKM------SRALQGYTLREPIGVVGHIIPWNFPT 173
           + ++  AA+  RYYA    K+ G    M      S AL   T+R   GV   I PWNFP 
Sbjct: 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNAL---TMRGR-GVFVAISPWNFPL 663
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 233
            +F  +V+ AL AG +++ KPAEQTP IA     L   AG+P   L +V G G   GAA+
Sbjct: 664 AIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAAL 722
Query: 234 ASHMDIDKVSFTGSTDVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMA 291
            +H DI  V FTGST+V R + +A A  +  + P+  E GG + ++          AD  
Sbjct: 723 TAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782
Query: 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +     + G+ C A   ++VQE + D   + +   A+   +GDP D A   GP +
Sbjct: 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVI 837

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 36  GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADX 95
           G+   T  P   E IAR+ +    D +  VK AR+A+    W      +R  I+ +  D 
Sbjct: 36  GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDA 93
Query: 96  XXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 155
                           GK+     +G++    +   Y  G +  I G +L   R+  G+ 
Sbjct: 94  LREKIQVLGSLVSLEMGKILV-EGVGEVQEYVDICDYAVGLSRMIGGPILPSERS--GHA 150
Query: 156 LRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHL 208
           L E   P+G+VG I  +NFP  ++    + A+  G   + K A  T LI++      A +
Sbjct: 151 LIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210
Query: 209 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV---MQAAATSNLKP 265
            +   +P  + ++  G G   G A+A    ++ +SFTGST VG+QV   +Q     +L  
Sbjct: 211 LEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSL-- 267
Query: 266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 325
             LELGG + ++ F+D D++     AL   +   G+ C  + R+++ E I+DE   +L +
Sbjct: 268 --LELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKK 325
Query: 326 KAKAWVVGDPFDPAVRQGP 344
                 VG+P+DP V  GP
Sbjct: 326 AYAQIRVGNPWDPNVLYGP 344

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 15/319 (4%)
Query: 35  SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKF 92
           SG+  E   P     IA++    +E+V+  +      F  G W      G ER  ++ K 
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93  ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
           AD                 GK  S A +G++  A + LR       KI G+ +       
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
           +   +G   REP+GVV  I P+N+P      K++ +   G  ++VKP+   PL A     
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
               AG P   + ++   G  A   +A    +  VSFTGST+VG +V++      +K   
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
           +ELGG  P ++ +D D++ AAD    GI    G+ C A   V  +  +Y +  +++ ++ 
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQV 346
            +  VGDP DP V  GP +
Sbjct: 322 SSLRVGDPRDPTVDVGPLI 340

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 15/319 (4%)
Query: 35  SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKF 92
           SG+  E   P     IA++    +E+V+  +      F  G W      G ER  ++ K 
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93  ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
           AD                 GK  S A +G++  A + LR       KI G+ +       
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
           +   +G   REP+GVV  I P+N+P      K++ +   G  ++VKP+   PL A     
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
               AG P   + ++   G  A   +A    +  VSFTGST+VG +V++      +K   
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
           +ELGG  P ++ +D D++ AAD    GI    G+ C A   V  +  +Y +  +++ ++ 
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQV 346
            +  VGDP DP V  GP +
Sbjct: 322 SSLRVGDPRDPTVDVGPLI 340

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 15/319 (4%)
Query: 35  SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP--RFSGAERRGIMLKF 92
           SG+  E   P     IA++    +E+V+  +      F  G W      G ER  ++ K 
Sbjct: 30  SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93  ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
           AD                 GK  S A +G++  A + LR       KI G+ +       
Sbjct: 87  ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
           +   +G   REP+GVV  I P+N+P      K++ +   G  ++VKP+   PL A     
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
               AG P   + ++   G  A   +A    +  VSFTGST+VG +V++      +K   
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
           +ELGG  P ++ +D D++ AAD    GI    G+ C A   V  +  +Y +  +++ ++ 
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQV 346
            +  VGDP DP V  GP +
Sbjct: 322 SSLRVGDPRDPTVDVGPLI 340

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD-- 216
           P  +VG I PWNFP T+  +   PAL AGC ++VKP+E  P        L  L  VP+  
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPL--LXALNTVPELR 183
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
            VL  V G G T GA + +++D   V FTGS   GR+V + AA     P  LELGGK P 
Sbjct: 184 DVLIFVEGGGET-GANLINYVDF--VCFTGSVATGREVAETAA-RRFIPAYLELGGKDPA 239
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
           ++ +  ++  A    L G + N G+ C++  R+YV E  ++EF  +L+ KA    +  P 
Sbjct: 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPL 299

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 142/315 (45%), Gaps = 9/315 (2%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEG-DKEDVDLAVKAARQAFDHGPWPRFSGA 83
           +I G+++    G+T E++DP  G+ +     G D   VD AV AAR+AF    W R    
Sbjct: 9   YIAGQWLAG-QGETLESLDP-VGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLE 64
Query: 84  ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           +R  ++ +FA                  GK   W    ++    N +     A  +  GE
Sbjct: 65  QRIELLERFAATLKSRADELARVIGEETGK-PLWESATEVTSXVNKVAISVQAFRERTGE 123
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
                         +P GVV    P+NFP  +    + PAL AG  ++ KP+E TP +A 
Sbjct: 124 KSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
                   AG+P GVLN+V G G   G A+A+H  +D + FTGS+  G  +         
Sbjct: 184 LTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKK 322
           K ++LE GG +PL++ +  D++ A    +     + G+ C  + R+ V +G + D    +
Sbjct: 243 KILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302
Query: 323 LVEKAKAWVVGDPFD 337
           LV  +    VG  FD
Sbjct: 303 LVAVSATLRVGR-FD 316

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211
           + Y ++EP GV   I P+N+P  +    +  A+  G T I+KP+E TP  +     +   
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
           A  P+ V  V+ G G    + + S +  D + FTGS +VG+ VMQAAA  +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328
           GK PL++  D D++   +  + G   N G+ C+A   +YV   + D   ++LVE+ K
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVK 295

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 132/305 (43%), Gaps = 17/305 (5%)
Query: 39  FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXX 98
           +++++P T EA A       + +D A+  A   +    W     A R  I+   A+    
Sbjct: 6   YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKE 63
Query: 99  XXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QG 153
                        GKL S +K  ++    +   YYA      HG E LK ++        
Sbjct: 64  HEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYAD-----HGPEXLKPTKLNSDLGNA 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           Y L++  GV+    PWNFP        +P    G  +++K A   P  A   A + K AG
Sbjct: 118 YYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAG 177
Query: 214 VPDGVL-NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
            P+G L N+ P +   A   I +   I  V+ TGS   G  V +AA   NLK  + ELGG
Sbjct: 178 APEGSLINLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTXELGG 234
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
               ++ DD D     ++      +N G++C +S R+ V++  YDE   +L         
Sbjct: 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKA 294
Query: 333 GDPFD 337
           GDP +
Sbjct: 295 GDPLE 299

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 10/265 (3%)
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
           W  +   +R  ++LK A                  GK  +W +   D+  A + + YYA 
Sbjct: 90  WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AA +     +++         +   P+G    I PWNFP  +F   +   +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           PAE   ++      +   AG P GV+N +PG G   GA +  H  I  ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
           + +AA       +  K   +E GGK+ +++ +  D + AA+  ++     +G+ C A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVG 333
           + + +G Y+   ++++++A+   VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 4/177 (2%)
Query: 152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211
           + Y ++EP GV   I P+N+P  +    +  A+  G T I+KP+E TP  +     +   
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
           A  P+ V  V+ G G    + + S +  D + FTGS +VG+ VMQAAA  +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328
           GK PL++  D D++   +  + G   N G+  +A   +YV   + D   ++LVE+ K
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVK 295

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
           W  +   +R  ++LK A                  GK  +W +   D+  A + + YYA 
Sbjct: 90  WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AA +     +++         +   P+G    I PWNFP  +F   +   +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           PAE   ++      +   AG P GV+N +PG G   GA +  H  I  ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
           + +AA       +  K   +E GGK  +++ +  D + AA+  ++     +G+ C A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVG 333
           + + +G Y+   ++++++A+   VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 143/325 (44%), Gaps = 9/325 (2%)
Query: 25  FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
           FI+G+ V   SG+     +P TGE    +A     D DLA            W   +   
Sbjct: 30  FIDGKRVAGTSGRVSNIFNPATGEVQGTVAL--ASDADLAAAVESAKAAQPKWAATNPQR 87
Query: 85  RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
           R  +  KF                   GK    AK GDI        +  G       E 
Sbjct: 88  RARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEF 146
Query: 145 LK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
            +     +  Y++R+P+G+   I P+NFP  +     +PA+A G   I+KP+E+ P + +
Sbjct: 147 TEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPI 206
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A L   AG+P G+LNVV G    A  AI +H DI  VSF GST + R V   AA  N 
Sbjct: 207 RLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAX-NG 264
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA-SSRVYVQEGIYDEFEK 321
           K      G K+  +I  D D++ AA+ AL+G  + + GE C A S  V V E   +    
Sbjct: 265 KRAQCFGGAKNHXIIXPDADLDQAAN-ALIGAGYGSAGERCXAISVAVPVGEETANRLID 323
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQV 346
           KLV   ++  +G   D     GP V
Sbjct: 324 KLVPXVESLRIGPYTDEKADXGPVV 348

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 10/265 (3%)
Query: 77  WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
           W  +   +R  ++LK A                  GK  +W +   D+  A + + YYA 
Sbjct: 90  WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AA +     +++         +   P+G    I PWNFP  +F   +   +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           PAE   ++      +   AG P GV+N +PG G   GA +  H  I  ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
           + +AA       +  K   +E GGK  +++ +  D + AA+  ++     +G+   A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVG 333
           + + +G Y+   ++++++A+   VG
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG 352

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 121/304 (39%), Gaps = 5/304 (1%)
Query: 41  TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXX 100
           +++P TG+ +A     + ++++ A+  A   F    W   S A+R   +           
Sbjct: 11  SVNPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHA 68
Query: 101 XXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
                      GK    A+  ++  +A    +YA            +    Q      P+
Sbjct: 69  EEXAQCITREXGKPIKQAR-AEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPL 127
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
           GV+  I PWNFP         P L AG + ++K A      A   A +   AG P GV  
Sbjct: 128 GVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYG 187
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
            V          I +   I  V+ TGS       + A A + LK   LELGG  P ++ +
Sbjct: 188 WVNANNEGVSQXI-NDPRIAAVTVTGSVRA-GAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
           D D+  A   A+ G   N G++C A+ R  V+EGI   F  + V  A A   GDP     
Sbjct: 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEEN 305
Query: 341 RQGP 344
             GP
Sbjct: 306 DLGP 309

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           Y   EP+GVV  I  WN+P  +    +  A+AAG  +I+KP+E +  +A   A L     
Sbjct: 98  YIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP-QY 156
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
           +   +  VV G  P     +    D   + +TGST VG+ VM AAA  +L PV+LELGGK
Sbjct: 157 MDQNLYLVVKGGVPETTELLKERFD--HIMYTGSTAVGKIVM-AAAAKHLTPVTLELGGK 213
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 328
           SP  +  D D++ A      G   N G+ CVA   +     I ++  +KL +  K
Sbjct: 214 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK 268

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
           Y   EP+GVV  I  WN+P  +    +  A+AAG  +++KP+E +  +A   A +     
Sbjct: 115 YIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
             D +  V+ G  P     +    D   + +TGST VG+ +M AAA  +L PV+LELGGK
Sbjct: 175 DKD-LYPVINGGVPETTELLKERFD--HILYTGSTGVGKIIMTAAA-KHLTPVTLELGGK 230
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330
           SP  +  + D++ A      G   N G+ CVA   +     I ++  +KL +  K +
Sbjct: 231 SPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF 287

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 16/296 (5%)
Query: 50  IARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXXXXX 105
           +A+    DK  ++ A+ AA   R+ +D  P      A+R  + LK AD            
Sbjct: 91  VAKFCYADKALLNRAIDAALAARKEWDLKPM-----ADRAQVFLKAADMLSGPRRAEVLA 145
Query: 106 XXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVG 164
                 GK    A++       +  R+ A  A ++ GE  + +  +      R   G V 
Sbjct: 146 KTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVA 205
Query: 165 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224
            I P+NF      +  +PAL  G  ++ KP++   L +     + + AG+P  ++  VP 
Sbjct: 206 AISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA 264
Query: 225 FGPTAGAAIASHMDIDKVSFTGST----DVGRQVMQAAATSNLKP-VSLELGGKSPLLIF 279
            GPT G  + S   +  ++FTGS      + RQV Q        P ++ E GGK+   + 
Sbjct: 265 DGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVH 324
Query: 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
              DV++     L       G+ C A SR+YV + ++ + + +L+E+     VGDP
Sbjct: 325 SSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDP 380

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 16/299 (5%)
Query: 47  GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXX 102
           G  +A+    DK  ++ A++AA   R+ +D  P      A+R  I LK AD         
Sbjct: 91  GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 103 XXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
                    GK    A++       +  R+ A  A ++ G+  + +  +      R   G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
            V  I P+NF      +  +PAL  G  ++ KP++   L +     + + AG+P  ++  
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
           VP  GP  G  + S   +  ++FTGS    + + +  A +         ++ E GGK+  
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
            +    DV +     L       G+ C A SR+YV   ++ + + +L+E+     VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 16/299 (5%)
Query: 47  GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXX 102
           G  +A+    DK  ++ A++AA   R+ +D  P      A+R  I LK AD         
Sbjct: 91  GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 103 XXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
                    GK    A++       +  R+ A  A ++ G+  + +  +      R   G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
            V  I P+NF      +  +PAL  G  ++ KP++   L +     + + AG+P  ++  
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
           VP  GP  G  + S   +  ++FTGS    + + +  A +         ++ E GGK+  
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
            +    DV +     L       G+ C A +R+YV   ++ + + +L+E+     VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDP 383

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 16/299 (5%)
Query: 47  GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXX 102
           G  +A+    DK  ++ A++AA   R+ +D  P      A+R  I LK AD         
Sbjct: 91  GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 103 XXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
                    GK    A++       +  R+ A  A ++ G+  + +  +      R   G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
            V  I P+NF      +  +PAL  G  ++ KP++   L +     + + AG+P  ++  
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
           VP  GP  G  + S   +  ++FTGS    + + +  A +         ++ E GGK+  
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
            +    DV +     L       G+ C A  R+YV   ++ + + +L+E+     VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDP 383

>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 142/349 (40%), Gaps = 34/349 (9%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           +  K  + G+++   +G      DP TG A+ R++    E +DLA   +    D G   R
Sbjct: 6   ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80  -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
             + A+R   +                      G   + + + DI G   TL YYA  GA
Sbjct: 62  ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
           +  ++H       E L   R+     +  P  GV   I  +NFP+   + K +PAL +G 
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
            +IVKPA  T  L     A +     +P G L+++ G   ++   +      D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
            D    +      +Q  A  N++  SL     S +L  D      A D+ +  ++     
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             G+ C A  R +V E   +   + L  K     VG+P + AVR G  V
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 342

>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 142/349 (40%), Gaps = 34/349 (9%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           +  K  + G+++   +G      DP TG A+ R++    E +DLA   +    D G   R
Sbjct: 6   ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80  -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
             + A+R   +                      G   + + + DI G   TL YYA  GA
Sbjct: 62  ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
           +  ++H       E L   R+     +  P  GV   I  +NFP+   + K +PAL +G 
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
            +IVKPA  T  L     A +     +P G L+++ G   ++   +      D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
            D    +      +Q  A  N++  SL     S +L  D      A D+ +  ++     
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVQADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             G+ C A  R +V E   +   + L  K     VG+P + AVR G  V
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 342

>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 142/349 (40%), Gaps = 34/349 (9%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           +  K  + G+++   +G      DP TG A+ R++    E +DLA   +    D G   R
Sbjct: 4   ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 59
Query: 80  -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
             + A+R   +                      G   + + + DI G   TL YYA  GA
Sbjct: 60  ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 118
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
           +  ++H       E L   R+     +  P  GV   I  +NFP+   + K +PAL +G 
Sbjct: 119 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 178
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
            +IVKPA  T  L     A +     +P G L+++ G   ++   +      D VSFTGS
Sbjct: 179 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 235
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
            D    +      +Q  A  N++  SL     S +L  D      A D+ +  ++     
Sbjct: 236 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 291
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             G+ C A  R +V E   +   + L  K     VG+P + AVR G  V
Sbjct: 292 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 340

>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 142/349 (40%), Gaps = 34/349 (9%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           +  K  + G+++   +G      DP TG A+ R++    E +DLA   +    D G   R
Sbjct: 6   ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80  -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
             + A+R   +                      G   + + + DI G   TL YYA  GA
Sbjct: 62  ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
           +  ++H       E L   R+     +  P  GV   I  +NFP+   + K +PAL +G 
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
            +IVKPA  T  L     A +     +P G L+++ G   ++   +      D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
            D    +      +Q  A  N++  SL     S +L  D      A D+ +  ++     
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             G+ C A  R +V E   +   + L  K     VG+P + AVR G  V
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 342

>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 141/349 (40%), Gaps = 34/349 (9%)
Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           +  K  + G+++   +G      DP TG A+ R++    E +DLA   +    D G   R
Sbjct: 6   ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80  -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
             + A+R   +                      G   + + + DI G   TL YYA  GA
Sbjct: 62  ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
           +  ++H       E L   R+     +  P  GV   I  +NFP+   + K +PAL +G 
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
            +IVKPA  T  L     A +     +P G L+++ G   ++   +      D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
            D    +      +Q  A  N++  SL     S +L  D      A D+ +  ++     
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             G+   A  R +V E   +   + L  K     VG+P + AVR G  V
Sbjct: 294 KSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 342

>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTP 199
           +L+    L   T+ EP+G++  I+P   PT+    K   +L     +I  P       T 
Sbjct: 88  ILEEDDNLGTXTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTN 147
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
             A      A  AG P  ++  +         A+  H DI  +  TG    G   ++AA 
Sbjct: 148 DAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATG----GPGXVKAAY 203
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
           +S  KP      G  P++I +  D+  A    L    F+ G +C +   V V + +YDE 
Sbjct: 204 SSG-KPAIGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEV 262
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQ 342
           +++     KA V+       VR+
Sbjct: 263 KERFASH-KAHVLSKTDADKVRK 284

>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 121 GDIPGAANTLRYYAGAADK--IHGEVLKM---SRA-LQGYTLRE------PIGVVGHIIP 168
           G+I   AN LR +A   +    H  +L     +RA L    +R       P+ V G    
Sbjct: 89  GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFG---A 145
Query: 169 WNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLAKLAGVPDGVLNVV 222
            NFP          + ALAAGC +IVK     P    ++A       K   +P  +  ++
Sbjct: 146 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLL 205
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFD 280
            G     G A+ SH +I  V FTGS   GR +    A    +P+    ELG  +P  IF 
Sbjct: 206 QGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN-LAHERPEPIPFYGELGAINPTFIFP 264
Query: 281 DVDVNTA--ADMALLGILFNKGEICVASSRVY 310
                 A  AD  +  +    G+ C     V+
Sbjct: 265 SAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296

>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 68/181 (37%), Gaps = 11/181 (6%)
Query: 156 LREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLA 209
           ++ P+G V      NFP          + ALAAGC ++VK     P    ++A       
Sbjct: 166 VQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAI 225
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ-AAATSNLKPVSL 268
           +  GV  GV +++ G     G A+  H  I  V FTGS   GR +    AA     P   
Sbjct: 226 RKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFG 285
Query: 269 ELGGKSPLLIFDD---VDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLV 324
           ELG  +P  +  +       T        +    G+ C       V EG   D F    V
Sbjct: 286 ELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFCTNPGIAVVIEGADADRFTTAAV 345
Query: 325 E 325
           E
Sbjct: 346 E 346

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	0.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	0.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	0.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	0.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	0.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	0.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	0.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	0.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	0.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	0.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	0.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	0.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	0.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-171
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	1e-170
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	1e-167
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	1e-156
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	1e-153
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-143
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	1e-142
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-141
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	1e-140
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	1e-139
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-125
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-125
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	1e-123
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	1e-118
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-115
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-115
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-115
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-115
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-110
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-109
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	1e-106
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-106
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-101
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-100
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-92
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-86
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	5e-77
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	6e-76
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	5e-74
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	3e-69
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	1e-60
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	7e-47
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	9e-46
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  591 bits (1525), Expect = 0.0
 Identities = 179/333 (53%), Positives = 228/333 (68%), Gaps = 1/333 (0%)

Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 13  QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72

Query: 75  G-PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
           G PW R   + R  ++ + ADLIE     LA LE LD GK +  + + D+      LRYY
Sbjct: 73  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132

Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192

Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252

Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+   A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312

Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  591 bits (1525), Expect = 0.0
 Identities = 180/331 (54%), Positives = 235/331 (70%), Gaps = 1/331 (0%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG- 75
            + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G 
Sbjct: 16  LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 75

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
           PW     +ER  ++ K ADLIE    +LA +EA++ GKL S A + D+ G   TLRY AG
Sbjct: 76  PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 135

Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
            ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPA
Sbjct: 136 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 195

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           EQTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + 
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           +AA  SNLK VSLELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E I
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           YDEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct: 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  589 bits (1522), Expect = 0.0
 Identities = 143/329 (43%), Positives = 216/329 (65%), Gaps = 4/329 (1%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
            +LFI GEFVD+   KT+ TI+P  G  I +++     DVD AV AA++AF++G W + +
Sbjct: 37  YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKIN 96

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             +R  ++ + AD++E+H E LA +EALDAG +++ A    +  +  T RY+AG  DKI 
Sbjct: 97  ARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 156

Query: 142 GEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
           G  + +++A        T +EP+GV G +IPWN+P  M   K +  LAAG T+++KPA+ 
Sbjct: 157 GATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216

Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
           TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276

Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
            A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE C+A+ R++V+E I++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHN 336

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +F +K+VE+ +   +G+P +     GPQ 
Sbjct: 337 QFVQKVVEEVEKMKIGNPLERDTNHGPQN 365

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  569 bits (1469), Expect = 0.0
 Identities = 135/327 (41%), Positives = 197/327 (60%), Gaps = 4/327 (1%)

Query: 22  TKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
            ++ ++G+ VD+ SG T + + P   GE +    E   +DV  AV AAR+AFD GPWPR 
Sbjct: 23  YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRM 82

Query: 81  SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
           SGAER  +M K ADLI    E LA++E+L+ GK  + A+ G+I   A+   Y AG A  +
Sbjct: 83  SGAERSRLMFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARAL 141

Query: 141 HGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
            G+          G  LREP+GVVG I PWNFP  +   +V  A+ +GCT+++KP+E T 
Sbjct: 142 EGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTS 201

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
             ++  A LA+ AG+PDGV NVV G+G  AG  +A   ++D V+FTGS  VG ++ + AA
Sbjct: 202 GTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
              +K V LELGGK P ++F D D++ AAD    G+  N G+ C++ SR+ VQEGI D  
Sbjct: 262 -RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL 320

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            ++L++ ++    GDP +   + G  +
Sbjct: 321 MERLLDISRKVAFGDPLNERTKIGAMI 347

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  569 bits (1468), Expect = 0.0
 Identities = 127/334 (38%), Positives = 196/334 (58%), Gaps = 3/334 (0%)

Query: 14  FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
            ++ +    + +I+GE+V+S +  T + I+P   E I  ++EG KED + A+ AAR+AF+
Sbjct: 25  MELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFE 84

Query: 74  HGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
            G W + +   R   +   AD I+EH E LA LE LD GK    +   D+    N   Y+
Sbjct: 85  SGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYF 143

Query: 134 AGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
           AG ADK  GE++       +   ++EP+GVV  I PWN+P      K++PALA GC++++
Sbjct: 144 AGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVM 203

Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           KP+E TPL  +    L +  G P G +N++ G G   G  ++ H ++D VSFTG  + G+
Sbjct: 204 KPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGK 263

Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
            +M+ AA +N+  ++LELGGK+P +IFDD D   A D AL G  F+ G++C A SR+ VQ
Sbjct: 264 HIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQ 322

Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             I D+FE+ L+++ K   +G+ FD     GP +
Sbjct: 323 NSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVI 356

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  565 bits (1458), Expect = 0.0
 Identities = 143/337 (42%), Positives = 189/337 (56%), Gaps = 9/337 (2%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-- 74
             I   +LFING++   V  K    I+P T   I  I    KEDVD+AV AA+ A     
Sbjct: 3   IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62

Query: 75  -GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
              W   SGA R   +   A  + E    LA LE++D GK    A   DI   A    YY
Sbjct: 63  GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYY 121

Query: 134 AGAADKIHGEVLKMSRALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
           A  A+K+                 + LREPIGVVG I PWN+P  M   KV+PALAAGC 
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181

Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
            I+KP+E   L  L    + K  G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+ 
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241

Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
            G ++M AAA   +KPVSLELGGKSPL++F+DVD++ AA+ A+ G  +  G+IC A+SR+
Sbjct: 242 TGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300

Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            + E I  EF  ++V+  K   + DP +   R GP V
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVV 337

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  557 bits (1438), Expect = 0.0
 Identities = 138/330 (41%), Positives = 196/330 (59%), Gaps = 5/330 (1%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
           + +    FI GEFV S SG+TF ++DP T E +   A G + +VD A KAA +AF    W
Sbjct: 23  KERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RW 80

Query: 78  PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
            R    ER+  +L+ A+LIE+HA+ LAV+E LDAG++    +   +  AA    +YA  A
Sbjct: 81  SRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYA 139

Query: 138 DK-IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           +  +      + R    YT+R P G VG I PWN P  +   +++PALA G T+++KPAE
Sbjct: 140 EHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAE 199

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
            +P  A   A + K A +P GV N+V GFG  AGAA+ +H  +  ++ TG T+ G+ VM+
Sbjct: 200 WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR 259

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
            AA  +LK +S ELGGKSP L+F D D+  A D  +  I    GE C ASSR+ V+E I+
Sbjct: 260 NAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIF 318

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           ++F  K+VE+A+A  VG P DP    GP +
Sbjct: 319 EDFVGKVVERARAIRVGHPLDPETEVGPLI 348

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  555 bits (1432), Expect = 0.0
 Identities = 121/326 (37%), Positives = 184/326 (56%), Gaps = 6/326 (1%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
              FI+G++V+  +G  FE+I P TGE IA++       V+ A+ +A++A     W   S
Sbjct: 15  ASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ--KEWAAMS 72

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKI 140
              R  I+ + AD++ E  + L+ LE LD GK      + D    A+   ++ G A   +
Sbjct: 73  PMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSAL 132

Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           +G+ + +      YT R P+GV   I  WN+P  +   K +PAL AG  M+ KP+E TPL
Sbjct: 133 NGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            AL  A +   AG+P G+ NV+ G   T G  + +H D+ KVS TGS   GR+V  AAA 
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA- 249

Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
            +LK V++ELGGKSP+++FDD D+ +A   A+LG  ++ G++C   +RV+VQ+     F 
Sbjct: 250 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL 309

Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQV 346
           + L  + +A ++GDP D A   GP V
Sbjct: 310 ENLKRRTEAMILGDPLDYATHLGPLV 335

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  550 bits (1419), Expect = 0.0
 Identities = 120/331 (36%), Positives = 187/331 (56%), Gaps = 6/331 (1%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFE-TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
             +     +  G  + S  G T E   +P TG  + ++     E+VD AV++A+ A+   
Sbjct: 15  VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL-- 72

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
            W + +G ER  +ML+ A +I E  + +A LE ++ GK  + A+  DI  A   + YYAG
Sbjct: 73  KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAG 131

Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
            A  + G+ +++      YT REP+GV   I+ WN+P  +   K +PALA G  ++ KP+
Sbjct: 132 LAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
             TP+  +  A +   AGVP G++NVV G G   G+ +  H ++ KVSFTGS   G++VM
Sbjct: 192 PMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVM 250

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           + +A   +K V+LELGGKSPLLIF D ++  A   AL+     +G++C   +RV+VQ  I
Sbjct: 251 EMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI 309

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             +F +++V++ KA VVGDP     R G  +
Sbjct: 310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLI 340

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  540 bits (1393), Expect = 0.0
 Identities = 126/336 (37%), Positives = 179/336 (53%), Gaps = 6/336 (1%)

Query: 12  SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA 71
           SL+K   +   KL INGE V    G+     +P TG+ +  IAE   E VD AV+AA  A
Sbjct: 14  SLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAA 72

Query: 72  FDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131
           F    W + +   R   +LK AD+IEE+ +V A LE+ + GK    A   +IP   +  R
Sbjct: 73  F--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFR 130

Query: 132 YYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
           ++AGAA  ++G               R+P+GVV  I PWN+P  M   K++PALAAG  +
Sbjct: 131 FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCV 190

Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
           ++KP+E TPL AL  A LAK    P GV+N++ G G T G  +  H  +  VS TGS   
Sbjct: 191 VLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249

Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
           G  ++   A S++K   +ELGGK+P+++FDD D+    +       +N G+ C A+ R+Y
Sbjct: 250 GEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIY 308

Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            Q+GIYD   +KL         G P D +   GP  
Sbjct: 309 AQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLS 344

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  529 bits (1365), Expect = 0.0
 Identities = 114/333 (34%), Positives = 170/333 (51%), Gaps = 6/333 (1%)

Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
               +  T+L I   F    +      ++PRTG  I  +AE     +D AV AA +AF  
Sbjct: 19  YFQSMMDTQLLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV- 76

Query: 75  GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
             W + + AER   +LK AD IE+ A+  A LEAL+ GK  +  K  ++P   +  R++A
Sbjct: 77  -GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFA 135

Query: 135 GAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           GA   +H                R+PIG+VG I PWN+P  M   K++PA+  G T++ K
Sbjct: 136 GAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFK 195

Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           P+EQTPL AL  A L     +P+GV+NV+ G G T G A+ +H  +  VS TG    G++
Sbjct: 196 PSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254

Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           V+ AAA   +K   LELGGK+P++++ D D+    +       +N G+ C A+ R+Y + 
Sbjct: 255 VLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEA 313

Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           GIY++    L             D     GP +
Sbjct: 314 GIYEKLVADLTSAVSTIRYNLDDDTENEIGPLI 346

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  509 bits (1313), Expect = 0.0
 Identities = 126/330 (38%), Positives = 181/330 (54%), Gaps = 2/330 (0%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
              ++ KLFI G++    +    E   P TGE + ++      DVD AV AAR AFD+GP
Sbjct: 4   SATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGP 63

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           WP     ER  ++     ++ E  ++   L A + G+  +  +     G+   + Y+AGA
Sbjct: 64  WPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGA 123

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           ADK+     +     Q    REP+GVVG I+ WN P  +   K++PAL AGCT+++KPA 
Sbjct: 124 ADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           +TPL A   A +    G+P+GVL+VVPG G   G A+ S+ DID  +FTGS+ VGR+V +
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGR 242

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
            AA   LKP +LELGGKS  +I +DVD+  A  M +   + N G+ CV  +R+      Y
Sbjct: 243 RAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           DE    +     A  VG P DPA + GP +
Sbjct: 302 DEIVAAVTNFVTALPVGPPSDPAAQIGPLI 331

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  484 bits (1248), Expect = e-171
 Identities = 116/330 (35%), Positives = 172/330 (52%), Gaps = 7/330 (2%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
               +TK +INGE+V+S S +T E I+P T E I ++A+G+K DVD AV+AA   +    
Sbjct: 3   AMRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE-- 60

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           +   S  ER+ ++ K     E   + +      + G   S ++        N       A
Sbjct: 61  FRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDA 120

Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
            D    E     R      ++E IGV G I PWNFPT    +K++ A AAG  +++KP+E
Sbjct: 121 LDNYEFE----ERRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSE 176

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           +TP  A+  A +    GVP GV N+V G G   G  ++ H  +  +SFTGS   G ++M+
Sbjct: 177 ETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
            AA  + K VSLELGGKSP ++ DDVD+  AA      ++ N G++C A +RV V   I 
Sbjct: 237 KAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           D F  +L E+     VG+P +   + GP +
Sbjct: 296 DAFLAELKEQFSQVRVGNPREDGTQVGPII 325

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  483 bits (1245), Expect = e-170
 Identities = 110/328 (33%), Positives = 170/328 (51%), Gaps = 4/328 (1%)

Query: 19  IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
           +   K +ING + D  +      IDP T EA A I+ G   D D A+ AA++AF    W 
Sbjct: 23  LNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWK 80

Query: 79  RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
             S  ER G + K  ++ E+ +  +A   +++ G     A        ++ +R +  A  
Sbjct: 81  TTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYK 140

Query: 139 KIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
           +   +   +    Q     + IGVVG I PWN+P     +KV PAL AGCTM++KP+E  
Sbjct: 141 EFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIA 200

Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
           PL A+ FA +   A +P GV N++ G G   G+ +++H D++ +SFTGST  G+ + + A
Sbjct: 201 PLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNA 260

Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
           + + LK V LELGGK   +IF D D++ A    +    +N G+ C A +R+ V++ IYD+
Sbjct: 261 S-NTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDK 318

Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
             K   + A+   VG         GP V
Sbjct: 319 AIKTAKDIAEKTQVGPGHQTGNHIGPVV 346

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  475 bits (1226), Expect = e-167
 Identities = 101/340 (29%), Positives = 166/340 (48%), Gaps = 12/340 (3%)

Query: 14  FKMPEIKFTKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAF 72
            +    K   L INGE V +      ++ +P R  + +  +++ +++  + A+++A +AF
Sbjct: 30  VEKELGKEYPLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAF 87

Query: 73  DHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132
               W   +  ER  I++K A +I       +     +AGK    A   D   A + L Y
Sbjct: 88  Q--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEY 144

Query: 133 YAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
           YA    +++     +SR   Q      P+GV   I PWNF   +        +  G T++
Sbjct: 145 YARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVV 204

Query: 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251
           +KPA  TP++A  F  + + AG+P GV+N VPG G   G  +  H     ++FTGS DVG
Sbjct: 205 LKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVG 264

Query: 252 RQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
            ++ + AA      ++LK V +E+GGK  +++  D D++ AA+  L+      G+ C A 
Sbjct: 265 VRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAG 324

Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           SR  + + +YDE  +K V  AK   VGDP +     GP +
Sbjct: 325 SRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVI 364

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  445 bits (1148), Expect = e-156
 Identities = 115/335 (34%), Positives = 170/335 (50%), Gaps = 6/335 (1%)

Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
               I  TK  I G++V+  S +    I+P     IA   +    DVD A +AA++A   
Sbjct: 6   TFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ-- 63

Query: 75  GPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134
             W     AER  I+ + A+L+EEH E +      ++G   S A   +I  A N  +  A
Sbjct: 64  AEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESA 122

Query: 135 GAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
               ++HG +   +    +    R   GVVG I PWNFP  +    V+PALA G  +++K
Sbjct: 123 SFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIK 182

Query: 194 PAEQTPLIALY-FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           PA  TP+      A + + AGVP GV++ V G G   G    +H     +SFTGST VGR
Sbjct: 183 PASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR 242

Query: 253 QVMQAAATS-NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
           +V + A     +K V+LELGG +P ++  D D++ AA  A +G   ++G+IC++ +RV V
Sbjct: 243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIV 302

Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              ++DEF +K VE  K    GDP       GP +
Sbjct: 303 DAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVI 337

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  441 bits (1136), Expect = e-153
 Identities = 92/335 (27%), Positives = 164/335 (48%), Gaps = 14/335 (4%)

Query: 20  KFTKLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
           +   L+I GE+VD+   +   +++P    E +   A+  K + + A++AA +AF    W 
Sbjct: 36  RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWK 91

Query: 79  RFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD 138
            +   +R  ++LK A L+      L      + GK    A   D+  A + + YYA AA 
Sbjct: 92  DWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAAL 150

Query: 139 KIHGEVLKMSRA--LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
           +     +++         +   P+G    I PWNFP  +F   +   +A G T+I KPAE
Sbjct: 151 RYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAE 210

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
              ++      +   AG P GV+N +PG G   GA +  H  I  ++FTGS +VG ++ +
Sbjct: 211 DAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270

Query: 257 AAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
           AA       +  K   +E GGK+ +++ +  D + AA+  ++     +G+ C A+SR+ +
Sbjct: 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLIL 330

Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            +G Y+   ++++++A+   VG P +     GP V
Sbjct: 331 TQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVV 364

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  412 bits (1061), Expect = e-143
 Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 7/327 (2%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
           +  +I G+++    G+T E++DP     +      D   VD AV AAR+AF    W R  
Sbjct: 6   STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRP 62

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
             +R  ++ +FA  ++  A+ LA +   + GK    +   ++    N +     A  +  
Sbjct: 63  LEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERT 121

Query: 142 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
           GE              +P GVV    P+NFP  +    + PAL AG  ++ KP+E TP +
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
           A         AG+P GVLN+V G G   G A+A+H  +D + FTGS+  G  +       
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240

Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFE 320
             K ++LE+GG +PL++ +  D++ A    +     + G+ C  + R+ V +G + D   
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300

Query: 321 KKLVEKAKAWVVGDPF-DPAVRQGPQV 346
            +LV  +    VG     PA   G  +
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVI 327

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  410 bits (1056), Expect = e-142
 Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 13/335 (3%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
             +     ++ GE+  S  G+  E   P     IA++    +E+V+  +    +      
Sbjct: 14  GGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-S 70

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
                G ER  ++ K AD+IE + +V A +  ++AGK  S A  G++  A + LR     
Sbjct: 71  ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELD 129

Query: 137 ADKIHGEVLKMSRALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
             KI G+ +                REP+GVV  I P+N+P      K++ +   G  ++
Sbjct: 130 LKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVV 189

Query: 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251
           VKP+   PL A         AG P   + ++   G      I +   +  VSFTGST+VG
Sbjct: 190 VKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVG 248

Query: 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 311
            +V++      +K   +ELGG  P ++ +D D++ AAD    GI    G+ C A   V  
Sbjct: 249 ERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA 305

Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           +  +Y +  +++ ++  +  VGDP DP V  GP +
Sbjct: 306 ERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLI 340

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  407 bits (1049), Expect = e-141
 Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 14/327 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           +FI+G++++    +  + I+P + E I +I    +E+   A+  A +  +          
Sbjct: 2   MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPIT 56

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           +R  I++  A  I+E  E LA + A+DAGK    A+  ++  +  T +  A    +   E
Sbjct: 57  KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDE 115

Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
           V+     L  +T REP+G+VG I P+NFP  +   K++PA+A G  ++  P+ + PL+ +
Sbjct: 116 VIPSDDRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174

Query: 204 YFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
             A + + A     VP GV N++ G G   G  I  +  ++ +SFTGS+ VG  + + A 
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234

Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
               K ++LELGG +P ++  D D+N A +  + G     G++C++   + V E I D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291

Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            +  V KAK   VG+P D     GP +
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLI 318

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  408 bits (1051), Expect = e-140
 Identities = 75/348 (21%), Positives = 130/348 (37%), Gaps = 26/348 (7%)

Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M E+   K  + G+++   +G      DP TG A+ R++    +       A        
Sbjct: 4   MTEL--LKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--A 58

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
                + A+R   +     L++        +   ++G   + +   DI G   TL YYA 
Sbjct: 59  ALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAK 117

Query: 136 AADKIHGEVLKMSRALQG----------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185
               +         + +           + L    GV   I  +NFP+   + K +PAL 
Sbjct: 118 LGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALL 177

Query: 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
           +G  +IVKPA  T  +          AG+ P G L+++ G   ++   +      D VSF
Sbjct: 178 SGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSF 234

Query: 245 TGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNT-----AADMALLGILFN 298
           TGS D    +    A       ++++    +  ++  D   +T          +  +   
Sbjct: 235 TGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVK 294

Query: 299 KGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            G+ C A  R +V E   +   + L  K     VG+P + AVR G  V
Sbjct: 295 SGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 342

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  404 bits (1041), Expect = e-139
 Identities = 105/336 (31%), Positives = 165/336 (49%), Gaps = 13/336 (3%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
            E     +  NGE+V+S +G+      P +G A+  I    +E+V+ A++ A+ A     
Sbjct: 7   TEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI-- 64

Query: 77  WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA 136
           W      ER  ++  +ADL+EE  E++  L   +  K    A  G++   A+ +R+ A  
Sbjct: 65  WKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADE 123

Query: 137 ADKIHGEVLKMSRALQG------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
           A +++GE LK  +   G         REP+GVV  I P+N+P  +   K++PAL  G T+
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183

Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
           + KPA Q  L  +        AG P+G++ VV G G   G  +  H  ID ++FTG T  
Sbjct: 184 VFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTT 243

Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
           G ++ + A    + PV LELGGK P ++ DD D+   A   + G     G+ C A  RV+
Sbjct: 244 GERISEKA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVF 300

Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           VQ+ + D+    + E  +   VG P D      P +
Sbjct: 301 VQDSVADQLVANIKELVEQLTVGSPEDD-ADITPVI 335

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  367 bits (945), Expect = e-125
 Identities = 112/335 (33%), Positives = 174/335 (51%), Gaps = 8/335 (2%)

Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M       ++I+G+FV        + ++P T   I+RI +G  ED   A+ AA +A    
Sbjct: 1   MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP-- 58

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
            W      ER   + K +  I E A  ++ L   + GK+   A+  ++   A+ + Y A 
Sbjct: 59  EWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAE 117

Query: 136 AADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
            A +  GE+++  R        +  +GV   I+PWNFP  +   K++PAL  G T+++KP
Sbjct: 118 WARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKP 177

Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
           +E TP  A+ FA +    G+P GV N+V G G T G  +A +  +  VS TGS   G ++
Sbjct: 178 SEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKI 237

Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
           M  AA  N+  V LELGGK+P ++ DD D+  A    +   + N G++C  + RVYVQ+G
Sbjct: 238 MATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296

Query: 315 IYDEFEKKLVEKAKAWVVGDPFD-PAVRQGPQVLI 348
           IYD+F  +L E  +A   G+P +   +  GP  LI
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNPAERNDIAMGP--LI 329

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  366 bits (942), Expect = e-125
 Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 15/331 (4%)

Query: 20  KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
           K  K ++NGE+  S      +  +P +G  +  +     E+VD    +A++A     W  
Sbjct: 3   KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRA 58

Query: 80  FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK 139
            S  ER   + K AD++    E +  + + +  K +  A   ++   A  + Y A    +
Sbjct: 59  LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLR 117

Query: 140 IHGEVLKMSRAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           + GEVL+                REP+G+V  I P+N+P  +   K++PAL AG  +  K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177

Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
           P  Q  +  L  A     AG+P GV N + G G   G  I  H  ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237

Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           + + A    ++P+ LELGGK   ++ +D D+   A   + G     G+ C A  RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294

Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
            + DE  +K+ EK  A  +G+P D      P
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDD-ADITP 324

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  362 bits (931), Expect = e-123
 Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 7/332 (2%)

Query: 16  MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
           M      K FING++    SG+T + ++P     I   +    + ++ A   A++A    
Sbjct: 1   MSFETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK-- 58

Query: 76  PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
            W + +  +R+ ++ K    + E+ + + ++ A + G     +   ++      L     
Sbjct: 59  EWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMT 117

Query: 136 AADKIHG-EVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
              ++ G + +            R P+GV+  I P+NFP  +    ++PA+A G +++ K
Sbjct: 118 YTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHK 177

Query: 194 PAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
           P  QT +      A   + AG+P GVLNV+       G  + ++     +SFTGST VGR
Sbjct: 178 PDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGR 237

Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
            + + A     K ++LELGG +P  +  D DV+ A D A+ G   ++G+IC+  +R+ V 
Sbjct: 238 HIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVH 296

Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
           + +YDEF +K   + K    GD  DP    GP
Sbjct: 297 QDVYDEFVEKFTARVKQLPYGDQTDPKTVVGP 328

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  349 bits (898), Expect = e-118
 Identities = 116/349 (33%), Positives = 176/349 (50%), Gaps = 16/349 (4%)

Query: 1   MEGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKED 60
           M  ++ +                 FI G++V S    T + + P TG+ I  I  G K D
Sbjct: 1   MSLTVQD---LHFKN------KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKAD 51

Query: 61  VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
            + A++ A+ A     W + +   R+ ++  FA+ I E+  +LA +   + GKL S A+ 
Sbjct: 52  AENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE- 108

Query: 121 GDIPGAANTLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMK 179
            ++   A  + Y    A  I G++L       + Y  + P GVV  I  WNFP  +   K
Sbjct: 109 MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168

Query: 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239
           + PAL  G TM++KP ++TPL       +AK AG+PDGVLNV+ G G   G  +      
Sbjct: 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPIT 228

Query: 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK 299
             ++ TGST  G+Q+ + +A   + PV LELGGK+P+++ DD D++ AA+ AL G   N 
Sbjct: 229 KMITMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANC 287

Query: 300 GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348
           G++C    R+YV   +YDEF  K +   K   VGDP D   + GP    
Sbjct: 288 GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGP--KC 334

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  342 bits (881), Expect = e-115
 Identities = 127/339 (37%), Positives = 189/339 (55%), Gaps = 13/339 (3%)

Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
            SL +       + +I GE+  + S  TFE  DP TGE++  + +    +   A++AA+ 
Sbjct: 8   PSLLR------HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQA 61

Query: 71  AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
           A+    W   +  ER  I+ ++ DL+  +++ LA++   + GK  + AK G+I  AA+ +
Sbjct: 62  AWA--GWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFI 118

Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
            ++A    ++ G+ L    A  +   ++EPIGV   I PWNFP  M   KV PALAAGC 
Sbjct: 119 EWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCP 178

Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
           ++VKPAE TP  AL  A LA+ AGVP GVL+VV G     G  I S+  + K+SFTGST 
Sbjct: 179 IVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTA 238

Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
           VGR +M  +A   +K ++LELGG +P ++FDD D++ A + A+     N G+ CV ++R 
Sbjct: 239 VGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRF 297

Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348
           +V E +YD F  KL        VG   +     GP  LI
Sbjct: 298 FVHERVYDAFADKLAAAVSKLKVGRGTESGATLGP--LI 334

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  342 bits (881), Expect = e-115
 Identities = 131/341 (38%), Positives = 199/341 (58%), Gaps = 13/341 (3%)

Query: 9   SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA 68
           +  +LF+       +  INGE++D+ +G+  +  +P  G+ +  + +   ++   A+ AA
Sbjct: 3   NDSNLFR------QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAA 56

Query: 69  RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 128
            +A     W   +  ER  I+  + +L+ EH + LA L  L+ GK  + AK G+I  AA+
Sbjct: 57  NRALPA--WRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAAS 113

Query: 129 TLRYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
            + ++A    +I+G+ +   +A  +   +++PIGV   I PWNFP  M   K  PALAAG
Sbjct: 114 FIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAG 173

Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
           CTM++KPA QTP  AL  A LA  AGVP GV NVV G     G  + S+  + K+SFTGS
Sbjct: 174 CTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233

Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 307
           T++GRQ+M+  A  ++K VSLELGG +P ++FDD D++ A + AL     N G+ CV ++
Sbjct: 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCAN 292

Query: 308 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348
           R+YVQ+G+YD F +KL +      +GD  D  V  GP  LI
Sbjct: 293 RLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGP--LI 331

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  343 bits (881), Expect = e-115
 Identities = 110/339 (32%), Positives = 170/339 (50%), Gaps = 13/339 (3%)

Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
             L           +I G + DS  G TF+  +P TG  IA++    +EDV  AV+A + 
Sbjct: 7   PLLEN------LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQS 60

Query: 71  AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
           A        +    RR  +    D ++E+ E +  +  ++ GK    A+ G++  AA   
Sbjct: 61  ALR--LTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFF 117

Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
            Y A     +    +              P+GV G I+PWNFP  M   K+S ALAAGC 
Sbjct: 118 DYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCP 177

Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
            ++KPA +TPL  + F  +     +PDG++N+V G     G  +  H D+  +SFTGST+
Sbjct: 178 SVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTE 237

Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
           VGR+++   A   +K ++LELGG +P ++FDD D+  AAD  +       G+ CV ++R+
Sbjct: 238 VGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRI 296

Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348
           +V E + D F +KL E+     VGD  +  +  GP  LI
Sbjct: 297 FVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGP--LI 333

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  342 bits (879), Expect = e-115
 Identities = 127/339 (37%), Positives = 198/339 (58%), Gaps = 13/339 (3%)

Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
            SL K      ++  +NG ++D+  G T +  +P  G  I  +       +  A+ A+ +
Sbjct: 28  PSLLK------SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAK 81

Query: 71  AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
           A     W   +  ER GI+ K+ DLI  +A+ +A++   + GK  + A+ G++  AA+ +
Sbjct: 82  ALSG--WAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFI 138

Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
            ++A  A +++G+ +   +   +   +R+P+GV   I PWNFP  M   K +PALAAGCT
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198

Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 249
           MIV+PA+ TPL AL    LA+ AG+P GVL +V G     GA + S+  + K+SFTGST+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTE 258

Query: 250 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 309
           VGR +M   A   +K +SLELGG +P ++FDD D++ A D A++    N G+ CV ++R+
Sbjct: 259 VGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRI 317

Query: 310 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348
           YVQ G+YD+F +KL  K K   VG+  +P V  GP  +I
Sbjct: 318 YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGP--MI 354

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  329 bits (846), Expect = e-110
 Identities = 94/350 (26%), Positives = 157/350 (44%), Gaps = 13/350 (3%)

Query: 1   MEGSLSNGSCKSLFKMPEI-KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKE 59
           M   L N    +  K   + +  +   NG +     G+   T  P   E IAR+ +    
Sbjct: 2   MSTLLINQPQYAWLKELGLREENEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVA 59

Query: 60  DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK 119
           D +  VK AR+A+    W      +R  I+ +  D + E  +VL  L +L+ GK+     
Sbjct: 60  DYEETVKKAREAWKI--WADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV 117

Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFM 178
            G++    +   Y  G +  I G +L   R+         P+G+VG I  +NFP  ++  
Sbjct: 118 -GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176

Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIA 234
             + A+  G   + K A  T LI++    +     +   +P  + ++  G G   G A+A
Sbjct: 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMA 235

Query: 235 SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG 294
               ++ +SFTGST VG+QV             LELGG + ++ F+D D++     AL  
Sbjct: 236 KDERVNLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFA 294

Query: 295 ILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
            +   G+ C  + R+++ E I+DE   +L +      VG+P+DP V  GP
Sbjct: 295 AVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGP 344

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  327 bits (841), Expect = e-109
 Identities = 124/343 (36%), Positives = 189/343 (55%), Gaps = 19/343 (5%)

Query: 11  KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
            +L +      T  F+ G ++ +    TF   DP +G A+  +A+    +   AV+AA +
Sbjct: 8   AALLR------TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYE 59

Query: 71  AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
           AF    W   S  ER  ++ K+ +L+ ++ + LA +   ++GK    A  G+I  +A  L
Sbjct: 60  AFCR--WREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFL 116

Query: 131 RYYAGAADKIHGEVLKMSRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCT 189
            +++  A +++G+++       +   L++PIGV   I PWNFP+ M   KV  ALAAGCT
Sbjct: 117 EWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCT 176

Query: 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTG 246
           ++VKPAE TP  AL  A LA  AG+P GV NV+P     A   G AI +   + K+SFTG
Sbjct: 177 VVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG 236

Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           ST  G+ ++  AA +++K VS+ELGG +P ++FD  +V+ A   A+     N G+ CV S
Sbjct: 237 STTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCS 295

Query: 307 SRVYVQEGIYDEFEKKLVEKAKAW-VVGDPFDPAVRQGPQVLI 348
           ++  VQ GI+D F K   E  K    VG+ F+    QGP  LI
Sbjct: 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGP--LI 336

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  320 bits (823), Expect = e-106
 Identities = 70/335 (20%), Positives = 120/335 (35%), Gaps = 27/335 (8%)

Query: 31  VDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89
           ++  +   F   +  TGEA+        + +V+ A  AA +      + R + ++R  ++
Sbjct: 1   MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLL 58

Query: 90  LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR 149
              A  +E  ++ +     L+          G+I   AN LR +A   +        +  
Sbjct: 59  RTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDT 117

Query: 150 ALQG---------YTLREPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKPAEQT 198
                           +  +G V      NFP   +      + ALAAGC +IVK     
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177

Query: 199 PLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
           P  +   A   + A     +P  +  ++ G     G A+ SH +I  V FTGS   GR +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237

Query: 255 MQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTA--ADMALLGILFNKGEICVASSRVYV 311
              A       P   ELG  +P  IF       A  AD  +  +    G+ C     V+ 
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297

Query: 312 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
                 +     +E A++  +     P+    P +
Sbjct: 298 LNTPETQ---AFIETAQS--LIRQQSPSTLLTPGI 327

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  333 bits (856), Expect = e-106
 Identities = 102/330 (30%), Positives = 159/330 (48%), Gaps = 14/330 (4%)

Query: 25  FINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           FING+ V +       T++P +  E + +I +    +V  A+ AA+ AF    W      
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPR 590

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG 142
            R   +LK A    +    L+  + L+ GK   W +   D+  A + L YYA    ++  
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGK--QWDQAYADVTEAIDFLEYYAREMIRLGQ 648

Query: 143 EVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
                    +  +   EP GV   I PWNFP  +     S A+  G  ++ KP+  T +I
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708

Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT- 260
             +   L + AG+P+GV N  PG G   G  +  H DI  ++FTGS + G ++++ AA  
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768

Query: 261 ----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
               +N+K +  E+GGK+ ++I DD D++ A    L      +G+ C A SRV V + +Y
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828

Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           D+F ++LV  AKA  VG   DPA   G   
Sbjct: 829 DKFIERLVSMAKATKVGPSEDPANYMGAVA 858

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  305 bits (783), Expect = e-101
 Identities = 84/310 (27%), Positives = 130/310 (41%), Gaps = 5/310 (1%)

Query: 35  SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD 94
           +     +++P TG+ +A +   + ++++ A+  A   F    W   S A+R   +     
Sbjct: 5   TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62

Query: 95  LIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY 154
            +  HAE +A     + GK    A+  ++  +A    +YA     +      +    Q  
Sbjct: 63  ALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121

Query: 155 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV 214
               P+GV+  I+PWNFP         P L AG + ++K A      A   A +   AG 
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181

Query: 215 PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 274
           P GV   V          I     I  V+ TGS   G  +   A  + LK   LELGG  
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSD 239

Query: 275 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
           P ++ +D D+  A   A+ G   N G++C A+ R  V+EGI   F  + V  A A  +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299

Query: 335 PFDPAVRQGP 344
           P       GP
Sbjct: 300 PLVEENDLGP 309

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  303 bits (779), Expect = e-100
 Identities = 84/307 (27%), Positives = 133/307 (43%), Gaps = 5/307 (1%)

Query: 38  TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97
            +++++P T EA A       + +D A+  A   +    W     A R  I+   A+ ++
Sbjct: 5   KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62

Query: 98  EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR 157
           EH + LA +  L+ GKL S +K  ++    +   YYA    ++       S     Y L+
Sbjct: 63  EHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121

Query: 158 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 217
           +  GV+    PWNFP        +P    G  +++K A   P  A   A + K AG P+G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181

Query: 218 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277
            L  +          IA    I  V+ TGS   G  V +AA   NLK  ++ELGG    +
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239

Query: 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337
           + DD D     ++      +N G++C +S R+ V++  YDE   +L         GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299

Query: 338 PAVRQGP 344
                 P
Sbjct: 300 ADTTLPP 306

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  285 bits (730), Expect = 2e-92
 Identities = 78/345 (22%), Positives = 121/345 (35%), Gaps = 29/345 (8%)

Query: 22  TKLFINGEFVDSV-SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
            K  + GE++D   +  +     P    A+     G  E V+ A +AA +AF    +   
Sbjct: 30  GKHLVAGEWLDGAGTFASAPAHGPAHDFAV-----GTVELVNRACEAAEEAFW--TYGYS 82

Query: 81  SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA--- 137
           S  ER   +   AD IE  AE +  + + + G   +    G+       LR +A      
Sbjct: 83  SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKG 141

Query: 138 ---DKIHGEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCT 189
              D+     +   +         ++ P+G V      NFP          + ALAAGC 
Sbjct: 142 DYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201

Query: 190 MIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 245
           ++VK     P      A       +  GV  GV +++ G     G A+  H  I  V FT
Sbjct: 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261

Query: 246 GSTDVGRQVM-QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA---LLGILFNKGE 301
           GS   GR +    AA     P   ELG  +P+ +  +     A  +       +    G+
Sbjct: 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQ 321

Query: 302 ICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ 345
            C       V EG   D F    VE              + +  +
Sbjct: 322 FCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYR 366

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  267 bits (684), Expect = 1e-86
 Identities = 59/298 (19%), Positives = 114/298 (38%), Gaps = 14/298 (4%)

Query: 53  IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAG 112
           +   +  ++D  +   ++A +   +  +S  +   I    +    +    LA     ++G
Sbjct: 1   MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58

Query: 113 KLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFP 172
                 K+     A+  + Y     ++  G +L+    L   T+ EP+G++  I+P   P
Sbjct: 59  MGIVEDKVIKNHFASEFI-YNKYKDEQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNP 116

Query: 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPT 228
           T+    K   +L     +I  P  +        A L    A  AG P  ++  +      
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176

Query: 229 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAA 288
              A+  H DI  +  TG   + +     AA S+ KP      G  P++I +  D+  A 
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231

Query: 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
              L+   F+ G +C +   V V + +YDE +++        +     D  VR+   +
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLI 288

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  254 bits (650), Expect = 5e-77
 Identities = 100/338 (29%), Positives = 145/338 (42%), Gaps = 11/338 (3%)

Query: 14  FKMPEIKFTKLFINGEFVD---SVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
             +P   F     N   V+     +     T        +  IA+   +    AV AAR 
Sbjct: 502 IPLPCDLFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARA 561

Query: 71  AFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL 130
            F    W R     R   + + A L+E  +     L   + GK    A + ++  AA+  
Sbjct: 562 GFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFC 618

Query: 131 RYYAGAADKIHGEVLKMSRAL--QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGC 188
           RYYA    K+ G    M               GV   I PWNFP  +F  +V+ AL AG 
Sbjct: 619 RYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGN 678

Query: 189 TMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248
           +++ KPAEQTP IA     L   AG+P   L +V G G   GAA+ +H DI  V FTGST
Sbjct: 679 SVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGST 737

Query: 249 DVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
           +V R + +A A  +  + P+  E GG + ++          AD  +     + G+ C A 
Sbjct: 738 EVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSAL 797

Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 344
             ++VQE + D   + +   A+   +GDP D A   GP
Sbjct: 798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGP 835

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  240 bits (616), Expect = 6e-76
 Identities = 112/331 (33%), Positives = 171/331 (51%), Gaps = 8/331 (2%)

Query: 18  EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
           EI+  K +INGE+V+S + +  + ++P T E + ++    KED+D A + A +AF    W
Sbjct: 2   EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59

Query: 78  PRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA 137
            + +   R  I+  F  L+ +H E LA L  ++ GK    A  G++      + + AGA 
Sbjct: 60  SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAP 118

Query: 138 DKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
             + G+ L  ++  ++    R PIGVVG I P+NFP  +       A+A G T I+KP+E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178

Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
           +TPL+      L + AG+P GV NVV G        I  H +I  +SF GS  VG  V  
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYV-Y 236

Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGI 315
              + NLK V    G K+  ++ +D ++       ++G  F + GE C+A + V V+EGI
Sbjct: 237 KKGSENLKRVQSLTGAKNHTIVLNDANLEDTVT-NIVGAAFGSAGERCMACAVVTVEEGI 295

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            DEF  KL EK     +G+  D  V  GP +
Sbjct: 296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVI 326

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  236 bits (605), Expect = 5e-74
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 9/341 (2%)

Query: 9   SCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA 68
             ++L+    +     FI+G+ V   SG+     +P TGE    +A     D+  AV++A
Sbjct: 14  GTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESA 73

Query: 69  RQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN 128
           + A     W   +   R  + +KF  L+ ++   LA + + + GK    AK GDI     
Sbjct: 74  KAAQP--KWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLE 130

Query: 129 TLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
              +  G       E  +     +  Y++R+P+G+   I P+NFP  +     +PA+A G
Sbjct: 131 VCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACG 190

Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
              I+KP+E+ P + +  A L   AG+P G+LNVV G    A  AI +H DI  VSF GS
Sbjct: 191 NAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGS 249

Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA- 305
           T + R V    A  N K      G K+ ++I  D D++ AA+ AL+G  + + GE C+A 
Sbjct: 250 TPIARYV-YGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAAN-ALIGAGYGSAGERCMAI 307

Query: 306 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           S  V V E   +    KLV   ++  +G   D     GP V
Sbjct: 308 SVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVV 348

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  223 bits (569), Expect = 3e-69
 Identities = 52/282 (18%), Positives = 100/282 (35%), Gaps = 15/282 (5%)

Query: 58  KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117
            ++V   +++A +A         S  +   I+   AD      E LA +   + G     
Sbjct: 11  IQEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68

Query: 118 AKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176
            K+     A+   ++       +    +LK     +   +  P+GVV  +IP   PT+  
Sbjct: 69  DKVIKNVFAS---KHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTV 125

Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAA 232
             K   ++ AG +++  P        L    +    A+ AG P G ++ +          
Sbjct: 126 IYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQ 185

Query: 233 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL 292
           +  H D   +  TG + + +     AA S+  P      G  P  I    ++  A    L
Sbjct: 186 LMKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHIL 240

Query: 293 LGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334
               F+ G IC +   V V+    +    +  ++   ++   
Sbjct: 241 DSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDA 282

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  202 bits (517), Expect = 1e-60
 Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 14/330 (4%)

Query: 24  LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
             +  E V +        + P      +A+    DK  ++ A+ AA  A     W     
Sbjct: 66  CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121

Query: 83  AERRGIMLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
           A+R  + LK AD++       +     +  GK    A++       +  R+ A  A ++ 
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181

Query: 142 GEV-LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
           GE  + +  +      R   G V  I P+NF      +        G  ++ KP++   L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL-AGAPALMGNVVLWKPSDTAML 240

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            +     + + AG+P  ++  VP  GPT G  + S   +  ++FTGS    + + +  A 
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300

Query: 261 S-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           +         ++ E GGK+   +    DV++     L       G+ C A SR+YV + +
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360

Query: 316 YDEFEKKLVEKAKAWVVGDPF-DPAVRQGP 344
           + + + +L+E+     VGDP  D       
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSA 390

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  164 bits (417), Expect = 7e-47
 Identities = 81/297 (27%), Positives = 124/297 (41%), Gaps = 42/297 (14%)

Query: 59  EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKLHS 116
             +  AVK AR AF  G         R   +     LI+E  +   ++ AL  D  K   
Sbjct: 18  SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQ--ELVGALAADLHKNEW 73

Query: 117 WAKMGDIPGAANTLRYYAGAADKIHG----EVLKMSRALQG---YTLREPIGVVGHIIPW 169
            A   ++      + Y      K+      E ++ +   Q    Y   EP+GVV  I  W
Sbjct: 74  NAYYEEVVYVLEEIEY---MIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTW 130

Query: 170 NFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAGVPDGV 218
           N+P   F + + P   A+AAG  +++KP+E +         +I  Y           D  
Sbjct: 131 NYP---FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD--------KDLY 179

Query: 219 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278
             V+ G G      +      D + +TGST VG+ +M AAA  +L PV+LELGGKSP  +
Sbjct: 180 -PVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYV 235

Query: 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335
             + D++ A      G   N G+ CVA   +     I ++  +KL +  K +   D 
Sbjct: 236 DKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDA 292

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  160 bits (408), Expect = 9e-46
 Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 48/302 (15%)

Query: 57  DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEAL--DAGKL 114
               +D    A +  F            R+  + +  + +  + E  A+  AL  D GK 
Sbjct: 26  SPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKE--ALYSALAEDLGKP 81

Query: 115 HSWAKMGDIPGAANTLRYYAGAADKIH----------GEVLKMSRALQGYTLREPIGVVG 164
                + +I    + + +   A   +            +++  S     Y ++EP GV  
Sbjct: 82  KDVVDLAEIGAVLHEIDF---ALAHLDEWVAPVSVPSPDIIAPSEC---YVVQEPYGVTY 135

Query: 165 HIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFAHLAKLAG 213
            I P+N+P     + ++P   A+  G T I+KP+E TP        +IA  F        
Sbjct: 136 IIGPFNYP---VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF-------- 184

Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
                + V+ G G    + + S    D + FTGS +VG+ VMQAAA  +L PV LELGGK
Sbjct: 185 -APEYVAVIQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGK 240

Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
            PL++  D D++   +  + G   N G+  +A   +YV   + D   ++LVE+ K  +  
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPE 300

Query: 334 DP 335
             
Sbjct: 301 IN 302

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 5e-06
 Identities = 58/387 (14%), Positives = 111/387 (28%), Gaps = 108/387 (27%)

Query: 11  KSLFKMPEIKFTKLFINGEFVDSV-SGKTFETIDPR------TGEAIARIAEGDKEDVDL 63
           + L K    +   L +    + +V + K +   +        T     R     K+  D 
Sbjct: 235 RRLLKSKPYE-NCLLV----LLNVQNAKAWNAFNLSCKILLTT-----R----FKQVTDF 280

Query: 64  --AVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS---WA 118
             A      + DH      +  E + ++LK+ D   +    L   E L            
Sbjct: 281 LSAATTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQD---LPR-EVLTTNPRRLSIIAE 335

Query: 119 KMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE--------------PIGVV 163
            + D     +  ++     DK+   +++ S   L+    R+              P  ++
Sbjct: 336 SIRDGLATWDNWKHVN--CDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

Query: 164 GHIIPWNFPTTMFFMKVSPALAAGCTMIVK-PAEQTPLI-ALYFAHLAKLAGVPDGVL-- 219
              + W        M V   L     ++ K P E T  I ++Y     KL       L  
Sbjct: 393 S--LIWFDVIKSDVMVVVNKLHKYS-LVEKQPKESTISIPSIYLELKVKLENEYA--LHR 447

Query: 220 ------NVVPGFGPTAGAA----------IASHMDIDKVSFTGSTDVGRQV------MQA 257
                 N+   F                 I  H+    +       + R V      ++ 
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK--NIEHPERMTLFRMVFLDFRFLEQ 505

Query: 258 AATSNLKPVSLELGGKSPLL------------IFDDVDVNTAADMALLGILFNKGEICVA 305
                ++  S        +L            I D+         A+L  L    E  + 
Sbjct: 506 K----IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLIC 561

Query: 306 S--SRVYVQ-------EGIYDEFEKKL 323
           S  + + ++       E I++E  K++
Sbjct: 562 SKYTDL-LRIALMAEDEAIFEEAHKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	93.1

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=5.5e-81  Score=611.28  Aligned_cols=330  Identities=41%  Similarity=0.704  Sum_probs=315.6

Q ss_pred             ccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 018922           17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI   96 (349)
Q Consensus        17 ~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l   96 (349)
                      ..+.+.++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++||+  .|+++|..+|.++|++++++|
T Consensus         2 ~~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l   79 (490)
T 2wme_A            2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL   79 (490)
T ss_dssp             CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence            445677899999999988889999999999999999999999999999999999999  899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhh
Q 018922           97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF  176 (349)
Q Consensus        97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  176 (349)
                      ++++++|++++++|+|||+.+++..|+..+++.++||+.+.+.+.++..+...+...+++|+|+|||++|+|||||+...
T Consensus        80 ~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~  159 (490)
T 2wme_A           80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA  159 (490)
T ss_dssp             HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred             HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhh
Confidence            99999999999999999999998557999999999999999988888777666677889999999999999999999999


Q ss_pred             HHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 018922          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (349)
Q Consensus       177 ~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~  256 (349)
                      ++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus       160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~  239 (490)
T 2wme_A          160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA  239 (490)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988899999999999999999999999999987


Q ss_pred             HHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       257 ~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      .++.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+
T Consensus       240 ~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~  319 (490)
T 2wme_A          240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ  319 (490)
T ss_dssp             HHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred             hhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCc
Confidence            66555899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      ++++++|||+++
T Consensus       320 ~~~~~~Gpli~~  331 (490)
T 2wme_A          320 DENTNFGPLVSF  331 (490)
T ss_dssp             STTCCBCCCSCH
T ss_pred             cccCccCCcCCH
Confidence            999999999974

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1.5e-77  Score=591.40  Aligned_cols=343  Identities=37%  Similarity=0.636  Sum_probs=318.6

Q ss_pred             CCCCCCCcccccccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhc--ccCCCCC
Q 018922            2 EGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPR   79 (349)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~--~~~~w~~   79 (349)
                      +++++++...+-+....+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||  +  .|+.
T Consensus        13 ~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~   90 (520)
T 3ed6_A           13 LGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQ   90 (520)
T ss_dssp             ------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTT
T ss_pred             cCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--cccc
Confidence            46777777777655555667789999999987778899999999999999999999999999999999999  7  8999


Q ss_pred             CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEee
Q 018922           80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE  158 (349)
Q Consensus        80 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  158 (349)
                      ++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+...+.. .+...+++++
T Consensus        91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~  169 (520)
T 3ed6_A           91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE  169 (520)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence            9999999999999999999999999999999999999998 5999999999999999888776655433 3456788999


Q ss_pred             cceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCC
Q 018922          159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD  238 (349)
Q Consensus       159 P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~  238 (349)
                      |+|||++|+|||||+...+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+
T Consensus       170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~  249 (520)
T 3ed6_A          170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE  249 (520)
T ss_dssp             ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred             CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999988889999999999


Q ss_pred             CCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHH
Q 018922          239 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE  318 (349)
Q Consensus       239 v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~  318 (349)
                      |+.|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+
T Consensus       250 vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~  328 (520)
T 3ed6_A          250 VDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK  328 (520)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHH
Confidence            9999999999999999999988 899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       319 f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |+++|.++++++++|||+|+++++|||+++
T Consensus       329 f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~  358 (520)
T 3ed6_A          329 FEQALIDRVKKIKLGNGFDADTEMGPVIST  358 (520)
T ss_dssp             HHHHHHHHHTTCCBCCTTSTTCSBCCCSCH
T ss_pred             HHHHHHHHHHhccCCCCccCCCcccccCCH
Confidence            999999999999999999999999999974

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=1.5e-76  Score=580.34  Aligned_cols=326  Identities=37%  Similarity=0.628  Sum_probs=309.9

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        10 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   87 (484)
T 3ifg_A           10 LLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIA   87 (484)
T ss_dssp             GSCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            3455799999999877788999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|++...++..+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus        88 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  166 (484)
T 3ifg_A           88 NSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIA  166 (484)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHH
Confidence            999999999999999999998 6999999999999998877766554432 34567889999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       167 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~  246 (484)
T 3ifg_A          167 RKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQ  246 (484)
T ss_dssp             HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||++
T Consensus       247 aa~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  325 (484)
T 3ifg_A          247 SAP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTE  325 (484)
T ss_dssp             TGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred             hhc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       326 ~~~~~Gpli~~  336 (484)
T 3ifg_A          326 SGATLGPLINE  336 (484)
T ss_dssp             TTCCBCCCSSH
T ss_pred             CCCCCCCCcCH
Confidence            99999999984

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=5.4e-76  Score=578.54  Aligned_cols=326  Identities=33%  Similarity=0.578  Sum_probs=311.3

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++
T Consensus         9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   86 (506)
T 3rh9_A            9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE   86 (506)
T ss_dssp             GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            4566899999999877788999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEe-ecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|+++..+++.+...+...+...++++ +|+|||++|+|||||+...+
T Consensus        87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  165 (506)
T 3rh9_A           87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA  165 (506)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence            999999999999999999998 7999999999999999988877655443445567888 99999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+++|+.|++.
T Consensus       166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~  245 (506)
T 3rh9_A          166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD  245 (506)
T ss_dssp             HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      +++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus       246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  324 (506)
T 3rh9_A          246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN  324 (506)
T ss_dssp             TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred             hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       325 ~~~~~Gpli~~  335 (506)
T 3rh9_A          325 DGIDIGPLINK  335 (506)
T ss_dssp             TTCSBCCCSCH
T ss_pred             cCCcccccCCH
Confidence            99999999984

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=1e-75  Score=576.39  Aligned_cols=327  Identities=54%  Similarity=0.918  Sum_probs=308.0

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      ..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++
T Consensus        20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (501)
T 1bxs_A           20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD   99 (501)
T ss_dssp             CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence            3468999999987667789999999999999999999999999999999999732 499999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  179 (349)
                      +++|++++++|+|||+.++...|+..+++.++|+++..+++.+...+...+...+++++|+|||++|+|||||+...+++
T Consensus       100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~  179 (501)
T 1bxs_A          100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK  179 (501)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence            99999999999999999876579999999999999998887766444333445688999999999999999999999999


Q ss_pred             HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      +++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus       180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa  259 (501)
T 1bxs_A          180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG  259 (501)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999988889999999999999999999999999999998


Q ss_pred             -hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          260 -TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       260 -~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                       . ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|+
T Consensus       260 ~~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~  338 (501)
T 1bxs_A          260 KS-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP  338 (501)
T ss_dssp             HT-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred             hc-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCccc
Confidence             6 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      ++++|||+++
T Consensus       339 ~~~~Gpli~~  348 (501)
T 1bxs_A          339 GVSQGPQIDK  348 (501)
T ss_dssp             TCCBCCCSCH
T ss_pred             CCccCCCcCH
Confidence            9999999984

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-75  Score=575.83  Aligned_cols=331  Identities=38%  Similarity=0.634  Sum_probs=310.3

Q ss_pred             CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922           16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      +.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|.|+.++..+|.++|+++++.
T Consensus         3 ~~~~~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~   82 (495)
T 3b4w_A            3 DSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKM   82 (495)
T ss_dssp             -CCEECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHH
T ss_pred             CccccccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHH
Confidence            33444557899999998766778999999999999999999999999999999999974459999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM  175 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~  175 (349)
                      |++++++|++++++|+|||+.+++..|+..+++.++|+++.++++.++..+...+...++.++|+|||++|+|||||+..
T Consensus        83 l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  162 (495)
T 3b4w_A           83 LAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFL  162 (495)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHH
Confidence            99999999999999999999998646999999999999999888777654433334568899999999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      .++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|+.|+||||+.+|+.|+
T Consensus       163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~  241 (495)
T 3b4w_A          163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG  241 (495)
T ss_dssp             HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999 888999999999999999999999999999


Q ss_pred             HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus       242 ~~aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  320 (495)
T 3b4w_A          242 RRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP  320 (495)
T ss_dssp             HHHHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCT
T ss_pred             HHhhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +++++++|||+++
T Consensus       321 ~~~~~~~gpli~~  333 (495)
T 3b4w_A          321 SDPAAQIGPLISE  333 (495)
T ss_dssp             TCTTCCBCCCSCH
T ss_pred             ccCCCccCCCcCH
Confidence            9999999999984

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=8.5e-76  Score=578.54  Aligned_cols=326  Identities=43%  Similarity=0.780  Sum_probs=306.9

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|++++..+|.++|++++++|+++++
T Consensus        37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~  116 (517)
T 2o2p_A           37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE  116 (517)
T ss_dssp             CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence            46899999997656678999999999999999999999999999999999984459999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc----CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      +|++++++|+|||+.+++..|+..+++.++|++.+.+++.+...+..    .....++.++|+|||++|+|||||+...+
T Consensus       117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  196 (517)
T 2o2p_A          117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS  196 (517)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence            99999999999999998646999999999999999888766554431    22246889999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~  276 (517)
T 2o2p_A          197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS  276 (517)
T ss_dssp             HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             Hh-hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          258 AA-TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       258 ~a-~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      ++ . ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|||+
T Consensus       277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~  355 (517)
T 2o2p_A          277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL  355 (517)
T ss_dssp             HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred             hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            98 6 899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      ++++++|||+++
T Consensus       356 ~~~~~~Gpli~~  367 (517)
T 2o2p_A          356 ERDTNHGPQNHE  367 (517)
T ss_dssp             STTCCBCCCSSH
T ss_pred             CCCCccCCCcCH
Confidence            999999999984

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=6.6e-76  Score=577.66  Aligned_cols=325  Identities=38%  Similarity=0.674  Sum_probs=309.1

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      ...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~  108 (504)
T 3ek1_A           31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIAN  108 (504)
T ss_dssp             CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence            345789999999877788999999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  178 (349)
                      +++|++++++|+|||+.+++ .|+..+++.++|++.+.++..+...+.. .+...+++++|+|||++|+|||||+...++
T Consensus       109 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~  187 (504)
T 3ek1_A          109 ADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITR  187 (504)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHH
Confidence            99999999999999999988 5999999999999999887766554432 245678899999999999999999999999


Q ss_pred             HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (349)
Q Consensus       179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~  258 (349)
                      ++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus       188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a  267 (504)
T 3ek1_A          188 KAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQC  267 (504)
T ss_dssp             HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                      +. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++
T Consensus       268 a~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~  346 (504)
T 3ek1_A          268 AP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEP  346 (504)
T ss_dssp             GG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred             hh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccc
Confidence            88 89999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      ++++|||+++
T Consensus       347 ~~~~Gpli~~  356 (504)
T 3ek1_A          347 GVVIGPMIEE  356 (504)
T ss_dssp             TCCBCCCSSH
T ss_pred             cCccccccCH
Confidence            9999999984

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=1.6e-75  Score=575.33  Aligned_cols=329  Identities=35%  Similarity=0.597  Sum_probs=313.0

Q ss_pred             CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922           16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      +.++..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.
T Consensus         7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~   84 (497)
T 3k2w_A            7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANK   84 (497)
T ss_dssp             CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred             cccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence            4456678899999999887778999999999999999999999999999999999999  89999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHH
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT  174 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~  174 (349)
                      |++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+...+.. .+...++.++|+|||++|+|||||+.
T Consensus        85 l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~  163 (497)
T 3k2w_A           85 IRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLA  163 (497)
T ss_dssp             HHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHH
Confidence            999999999999999999999998 6999999999999999888776654432 34567889999999999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus       164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i  243 (497)
T 3k2w_A          164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI  243 (497)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      ++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus       244 ~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~  322 (497)
T 3k2w_A          244 YKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD  322 (497)
T ss_dssp             HHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred             HHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence            999987 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+++
T Consensus       323 p~~~~~~~gpli~~  336 (497)
T 3k2w_A          323 PMDADSQMGPKCNQ  336 (497)
T ss_dssp             TTSTTCSBCCCSCH
T ss_pred             CCCCCCccccCcCH
Confidence            99999999999984

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=3.5e-75  Score=573.24  Aligned_cols=327  Identities=36%  Similarity=0.616  Sum_probs=308.6

Q ss_pred             ccccccceeecCeeeeCCCCCe-EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922           17 PEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        17 ~~~~~~~~~i~g~~~~~~~~~~-~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      .-+..+++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.
T Consensus        15 ~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~   92 (503)
T 1a4s_A           15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARI   92 (503)
T ss_dssp             CCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred             ccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHH
Confidence            3345567899999998766677 99999999999999999999999999999999999  89999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM  175 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~  175 (349)
                      |++++++|++++++|+|||+.++. .|+..+++.++|+++..+++.++..+...+...++.++|+|||++|+|||||+..
T Consensus        93 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  171 (503)
T 1a4s_A           93 IRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMI  171 (503)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHH
Confidence            999999999999999999999987 6999999999999999888766544433334567889999999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      .++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ ++++.|+.||+|+.|+||||+.+|+.|+
T Consensus       172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~  250 (503)
T 1a4s_A          172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM  250 (503)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999977 8999999999999999999999999999


Q ss_pred             HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus       251 ~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p  329 (503)
T 1a4s_A          251 EMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP  329 (503)
T ss_dssp             HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +++++++|||+++
T Consensus       330 ~~~~~~~gpli~~  342 (503)
T 1a4s_A          330 LLTETRMGGLISK  342 (503)
T ss_dssp             TSTTCCBCCCSCH
T ss_pred             cccCCccCCCcCH
Confidence            9999999999984

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-75  Score=575.30  Aligned_cols=326  Identities=41%  Similarity=0.696  Sum_probs=310.9

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      +..+++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++||  .  .|+.++..+|.++|+++++.
T Consensus        20 ~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~   97 (528)
T 3u4j_A           20 KSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADL   97 (528)
T ss_dssp             CCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHH
T ss_pred             ccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHH
Confidence            3466899999999887788999999999 99999999999999999999999999  7  89999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHH
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT  174 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~  174 (349)
                      |++++++|++++++|+|||+.++. .|+..+++.++|+++.++++.++..+.. .+...++.++|+|||++|+|||||+.
T Consensus        98 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~  176 (528)
T 3u4j_A           98 ILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFI  176 (528)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHH
Confidence            999999999999999999999996 7999999999999999888776655543 34567889999999999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|
T Consensus       177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i  256 (528)
T 3u4j_A          177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL  256 (528)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      ++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus       257 ~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~  335 (528)
T 3u4j_A          257 GEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD  335 (528)
T ss_dssp             HHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred             HHHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence            999987 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+++
T Consensus       336 p~~~~~~~Gpli~~  349 (528)
T 3u4j_A          336 PLNERTKIGAMISE  349 (528)
T ss_dssp             TTSTTCSBCCCSCH
T ss_pred             CCCcCCccCCccCH
Confidence            99999999999974

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-75  Score=576.40  Aligned_cols=334  Identities=30%  Similarity=0.432  Sum_probs=308.6

Q ss_pred             ccccccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHH
Q 018922           10 CKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM   89 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L   89 (349)
                      .-+.|.+.||..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|
T Consensus        15 ~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L   92 (521)
T 4e4g_A           15 TENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVF   92 (521)
T ss_dssp             ---------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHH
T ss_pred             chhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHH
Confidence            3567888889999999999999887778999999999999999999999999999999999999  89999999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcC
Q 018922           90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIP  168 (349)
Q Consensus        90 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p  168 (349)
                      +++++.|++++++|++++++|+|||+.+++ .|+..+++.++|++...+.+.+...+. ..+...+++++|+|||++|+|
T Consensus        93 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P  171 (521)
T 4e4g_A           93 MKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITP  171 (521)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECC
Confidence            999999999999999999999999999998 699999999999998877766654332 234557889999999999999


Q ss_pred             CCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCCh
Q 018922          169 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST  248 (349)
Q Consensus       169 ~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~  248 (349)
                      ||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++| +.+.++.|+.||+|+.|+||||+
T Consensus       172 wN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~  250 (521)
T 4e4g_A          172 FNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGST  250 (521)
T ss_dssp             SSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCH
T ss_pred             CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCH
Confidence            99999999999999999999999999999999999999999999999999999999 45677999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecc-cHHHHHHHHHHHh
Q 018922          249 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKA  327 (349)
Q Consensus       249 ~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~  327 (349)
                      .+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|.+++
T Consensus       251 ~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~  329 (521)
T 4e4g_A          251 PIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMV  329 (521)
T ss_dssp             HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHH
Confidence            999999999988 89999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             hcccccCCCCCCCcccccCCC
Q 018922          328 KAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       328 ~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +++++|+|+++++++|||+++
T Consensus       330 ~~~~vG~~~~~~~~~gpli~~  350 (521)
T 4e4g_A          330 ESLRIGPYTDEKADMGPVVTK  350 (521)
T ss_dssp             HTCCBCCTTCTTCSBCCCSCH
T ss_pred             HhccCCCCCCccCccCCCCCH
Confidence            999999999999999999974

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=3.6e-75  Score=571.99  Aligned_cols=325  Identities=34%  Similarity=0.538  Sum_probs=305.8

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|++++++|++
T Consensus        23 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~  100 (497)
T 3i44_A           23 LNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEK  100 (497)
T ss_dssp             EEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHH
Confidence            3567899999999887778999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEE-eecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++..|+..+++.++++++........... ..+...+++ ++|+|||++|+|||||+...+
T Consensus       101 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  179 (497)
T 3i44_A          101 RSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVT  179 (497)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHH
Confidence            999999999999999999987569999999999999877654332221 113446778 999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~  259 (497)
T 3i44_A          180 LKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKN  259 (497)
T ss_dssp             HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. ++||+++|+|||||+||++||| |.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|
T Consensus       260 aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~  337 (497)
T 3i44_A          260 ASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ  337 (497)
T ss_dssp             HHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred             Hhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            987 8999999999999999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       338 ~~~~~Gpli~~  348 (497)
T 3i44_A          338 TGNHIGPVVSK  348 (497)
T ss_dssp             CSSCBCCCSCH
T ss_pred             CCCccCCCcCH
Confidence            99999999974

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=2.6e-75  Score=573.12  Aligned_cols=325  Identities=35%  Similarity=0.588  Sum_probs=308.3

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      |...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+  .|++++..+|.++|+++++.|++
T Consensus        23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   99 (498)
T 4f3x_A           23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK   99 (498)
T ss_dssp             CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence            456789999999987666 899999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.++...|+..+++.++|+++.++++.+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus       100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  179 (498)
T 4f3x_A          100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA  179 (498)
T ss_dssp             THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence            9999999999999999999933799999999999999988876654432 234567889999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~  258 (498)
T 4f3x_A          180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA  258 (498)
T ss_dssp             HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999 99999999999888899999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+|
T Consensus       259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d  337 (498)
T 4f3x_A          259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD  337 (498)
T ss_dssp             HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred             HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       338 ~~~~~Gpli~~  348 (498)
T 4f3x_A          338 TENEIGPLISR  348 (498)
T ss_dssp             GGCSSCCCSCH
T ss_pred             ccCccccCcCH
Confidence            99999999974

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=8.9e-75  Score=570.76  Aligned_cols=328  Identities=44%  Similarity=0.712  Sum_probs=308.5

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~   95 (349)
                      +...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+++   .|+.++..+|.++|+++++.
T Consensus         5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~   84 (503)
T 3iwj_A            5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK   84 (503)
T ss_dssp             CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred             CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence            445678999999988778899999999999999999999999999999999999732   69999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCcee-ec---cCCccceEEeecceeEEEEcCCCc
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM---SRALQGYTLREPIGVVGHIIPWNF  171 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~i~p~n~  171 (349)
                      |++++++|++++++|+|||+.+++ .|+..+++.++|++.+.+++.+... +.   ..+...+++++|+|||++|+||||
T Consensus        85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~  163 (503)
T 3iwj_A           85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY  163 (503)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence            999999999999999999999997 6999999999999998877665431 11   134457889999999999999999


Q ss_pred             cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHH
Q 018922          172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG  251 (349)
Q Consensus       172 P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g  251 (349)
                      |+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|
T Consensus       164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G  243 (503)
T 3iwj_A          164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG  243 (503)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred             HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence            99999999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       252 ~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      +.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus       244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  322 (503)
T 3iwj_A          244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK  322 (503)
T ss_dssp             HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence            999999887 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccCCC
Q 018922          332 VGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       332 ~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||+++++++|||+++
T Consensus       323 ~g~p~~~~~~~gpli~~  339 (503)
T 3iwj_A          323 ISDPLEEGCRLGPVVSE  339 (503)
T ss_dssp             BSCTTSTTCCBCCCSCH
T ss_pred             CCCCCCCCCcccCccCH
Confidence            99999999999999984

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=7.5e-75  Score=570.10  Aligned_cols=325  Identities=54%  Similarity=0.859  Sum_probs=306.5

Q ss_pred             ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      ++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++++
T Consensus        21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  100 (500)
T 1o04_A           21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT  100 (500)
T ss_dssp             SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            58999999987667889999999999999999999999999999999999721 49999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|++++++|+|||+.++...|+..+++.++|+++.++++.+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus       101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a  180 (500)
T 1o04_A          101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG  180 (500)
T ss_dssp             HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence            99999999999999987657999999999999998887766544433344568899999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh-h
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-T  260 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a-~  260 (349)
                      +||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.++ .
T Consensus       181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~  260 (500)
T 1o04_A          181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS  260 (500)
T ss_dssp             HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred             HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence            999999999999999999999999999999999999999999987889999999999999999999999999999998 6


Q ss_pred             CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~  340 (349)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++++
T Consensus       261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~  339 (500)
T 1o04_A          261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT  339 (500)
T ss_dssp             -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred             -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      ++|||+++
T Consensus       340 ~~Gpli~~  347 (500)
T 1o04_A          340 EQGPQVDE  347 (500)
T ss_dssp             SBCCCSSH
T ss_pred             ccCcccCH
Confidence            99999984

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.9e-75  Score=573.86  Aligned_cols=323  Identities=36%  Similarity=0.615  Sum_probs=308.6

Q ss_pred             cccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922           18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE   97 (349)
Q Consensus        18 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~   97 (349)
                      ++..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+
T Consensus        11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~   88 (517)
T 3r31_A           11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR   88 (517)
T ss_dssp             TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence            45567899999999877788999999999999999999999999999999999999  8999999999999999999999


Q ss_pred             HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhh----hcCceeeccCCccceEEeecceeEEEEcCCCccH
Q 018922           98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT  173 (349)
Q Consensus        98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~  173 (349)
                      +++++|++++++|+|||+.++   |+..+++.++|++...+.    +.++..+...+. .+++++|+|||++|+|||||+
T Consensus        89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~  164 (517)
T 3r31_A           89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ  164 (517)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence            999999999999999999987   899999999999999887    666655544444 789999999999999999999


Q ss_pred             HhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922          174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ  253 (349)
Q Consensus       174 ~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~  253 (349)
                      ...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|+.||+|+.|+||||+.+|+.
T Consensus       165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~  243 (517)
T 3r31_A          165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK  243 (517)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999 8889999999999999999999999999


Q ss_pred             HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922          254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG  333 (349)
Q Consensus       254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g  333 (349)
                      |++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       244 i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G  322 (517)
T 3r31_A          244 VAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG  322 (517)
T ss_dssp             HHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence            9999998 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCC
Q 018922          334 DPFDPAVRQGPQVLI  348 (349)
Q Consensus       334 ~p~~~~~~~Gpl~~~  348 (349)
                      ||+++++++|||+++
T Consensus       323 ~p~~~~~~~Gpli~~  337 (517)
T 3r31_A          323 DPLDYATHLGPLVSK  337 (517)
T ss_dssp             CTTSTTCSBCCBSCH
T ss_pred             CCCCcCCcccCCcCH
Confidence            999999999999974

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=8.5e-75  Score=569.06  Aligned_cols=331  Identities=37%  Similarity=0.607  Sum_probs=306.0

Q ss_pred             cccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 018922           13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKF   92 (349)
Q Consensus        13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~   92 (349)
                      .++...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++
T Consensus        15 ~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~   91 (495)
T 1wnd_A           15 LYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKL   91 (495)
T ss_dssp             -------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred             ccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Confidence            34444445567999999998655 7899999999999999999999999999999999999  89999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCc
Q 018922           93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNF  171 (349)
Q Consensus        93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~  171 (349)
                      ++.|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.++..+.. .+...++.++|+|||++|+||||
T Consensus        92 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~  171 (495)
T 1wnd_A           92 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNY  171 (495)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcc
Confidence            99999999999999999999999998744999999999999998887766544432 23356788999999999999999


Q ss_pred             cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHH
Q 018922          172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG  251 (349)
Q Consensus       172 P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g  251 (349)
                      |+...++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|++||+|+.|+||||+.+|
T Consensus       172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G  250 (495)
T 1wnd_A          172 PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG  250 (495)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred             hHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence            99999999999999999999999999999999999999999 99999999999878899999999999999999999999


Q ss_pred             HHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       252 ~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      +.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++++++
T Consensus       251 ~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  329 (495)
T 1wnd_A          251 EHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK  329 (495)
T ss_dssp             HHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhcc
Confidence            999999987 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccCCC
Q 018922          332 VGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       332 ~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||+++++++|||+++
T Consensus       330 ~g~p~~~~~~~Gpli~~  346 (495)
T 1wnd_A          330 SGAPDDESTELGPLSSL  346 (495)
T ss_dssp             BCCTTSTTCCBCCCSCH
T ss_pred             CCCCccCCCCccCCCCH
Confidence            99999999999999984

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-74  Score=571.35  Aligned_cols=323  Identities=43%  Similarity=0.688  Sum_probs=307.4

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++++
T Consensus        27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~  104 (515)
T 2d4e_A           27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD  104 (515)
T ss_dssp             BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999876678899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      +|++++++|+|||+.+++ .|+..+++.++|+++..++..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus       105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  183 (515)
T 2d4e_A          105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI  183 (515)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence            999999999999999998 799999999999999888877665443 234456889999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT  260 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~  260 (349)
                      ++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++.
T Consensus       184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~  263 (515)
T 2d4e_A          184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD  263 (515)
T ss_dssp             HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred             hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999777899999999999999999999999999999988


Q ss_pred             CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922          261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV  340 (349)
Q Consensus       261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~  340 (349)
                       ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus       264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~  342 (515)
T 2d4e_A          264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET  342 (515)
T ss_dssp             -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred             -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCC
Q 018922          341 RQGPQVLI  348 (349)
Q Consensus       341 ~~Gpl~~~  348 (349)
                      ++|||+++
T Consensus       343 ~~gpli~~  350 (515)
T 2d4e_A          343 EVGPLIHP  350 (515)
T ss_dssp             SBCCCSCH
T ss_pred             ccCCCcCH
Confidence            99999984

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=2.8e-74  Score=570.28  Aligned_cols=323  Identities=31%  Similarity=0.500  Sum_probs=306.5

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      ..+++||||+|+.  ++++++++||+| |+++++++.++.+|+++|+++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~  111 (538)
T 3qan_A           36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR  111 (538)
T ss_dssp             EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence            3568999999997  567899999999 999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHh-hhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|+++. .+...++..+...+...++.++|+|||++|+|||||+...+
T Consensus       112 ~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  190 (538)
T 3qan_A          112 RKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV  190 (538)
T ss_dssp             THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence            999999999999999999998 5999999999999998 55566655543345567889999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~  270 (538)
T 3qan_A          191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER  270 (538)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCC------CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          258 AATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       258 ~a~~~------~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      ++. +      +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus       271 aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  349 (538)
T 3qan_A          271 AAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT  349 (538)
T ss_dssp             HTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred             hhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence            987 6      899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccCCC
Q 018922          332 VGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       332 ~g~p~~~~~~~Gpl~~~  348 (349)
                      +|||+++++++|||+++
T Consensus       350 vG~p~~~~~~~Gpli~~  366 (538)
T 3qan_A          350 VGDPTNRDNYMGPVIDE  366 (538)
T ss_dssp             BSCTTSTTCSBCCCSCH
T ss_pred             CCCCCCCCCCCcCccCH
Confidence            99999999999999984

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=2e-74  Score=566.06  Aligned_cols=326  Identities=39%  Similarity=0.675  Sum_probs=309.3

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++
T Consensus         7 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   84 (481)
T 3jz4_A            7 LFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMME   84 (481)
T ss_dssp             GCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             CcccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence            3455799999999887788999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|++....+..+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus        85 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  163 (481)
T 3jz4_A           85 HQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMIT  163 (481)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHH
Confidence            999999999999999999998 6999999999999998877665554432 34556889999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus       164 ~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~  243 (481)
T 3jz4_A          164 RKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQ  243 (481)
T ss_dssp             HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus       244 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~  322 (481)
T 3jz4_A          244 CAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLD  322 (481)
T ss_dssp             HTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTS
T ss_pred             Hhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCcc
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       323 ~~~~~gpli~~  333 (481)
T 3jz4_A          323 NGVTIGPLIDE  333 (481)
T ss_dssp             TTCCBCCCSCH
T ss_pred             CcCccccccCH
Confidence            99999999974

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=1.9e-74  Score=565.92  Aligned_cols=325  Identities=33%  Similarity=0.576  Sum_probs=307.3

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      ..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus         5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (479)
T 2imp_A            5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER   82 (479)
T ss_dssp             EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence            356789999999876677899999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  178 (349)
                      +++|++++++|+|||+.+++ .|+..+++.++|+++..++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus        83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  161 (479)
T 2imp_A           83 ASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR  161 (479)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence            99999999999999999988 6999999999999998877666553332 233568899999999999999999999999


Q ss_pred             HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA  258 (349)
Q Consensus       179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~  258 (349)
                      ++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++.+
T Consensus       162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a  241 (479)
T 2imp_A          162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA  241 (479)
T ss_dssp             HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997778899999999999999999999999999999


Q ss_pred             hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC-
Q 018922          259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD-  337 (349)
Q Consensus       259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~-  337 (349)
                      +. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++ 
T Consensus       242 a~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~  320 (479)
T 2imp_A          242 AK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER  320 (479)
T ss_dssp             HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred             hc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence            87 8999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +++++|||+++
T Consensus       321 ~~~~~gpli~~  331 (479)
T 2imp_A          321 NDIAMGPLINA  331 (479)
T ss_dssp             SSCSBCCCSSH
T ss_pred             CCCccCCCcCH
Confidence            99999999984

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=4.1e-74  Score=565.50  Aligned_cols=321  Identities=32%  Similarity=0.523  Sum_probs=304.9

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      ..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++
T Consensus        11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~   88 (505)
T 3prl_A           11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK   88 (505)
T ss_dssp             ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence            45789999999877778999999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccC------CccceEEeecceeEEEEcCCCccHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR------ALQGYTLREPIGVVGHIIPWNFPTT  174 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~P~GVv~~i~p~n~P~~  174 (349)
                      ++|++++++|+|||+.+++ .|+..+++.++|+++..+++.++..+...      +...+++++|+|||++|+|||||+.
T Consensus        89 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~  167 (505)
T 3prl_A           89 EIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN  167 (505)
T ss_dssp             HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence            9999999999999999998 59999999999999998887765544321      3456888999999999999999999


Q ss_pred             hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus       168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i  247 (505)
T 3prl_A          168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI  247 (505)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      ++.++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus       248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~  324 (505)
T 3prl_A          248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS  324 (505)
T ss_dssp             HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred             HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence            99875   799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+ +++++|||+++
T Consensus       325 p~-~~~~~gpli~~  337 (505)
T 3prl_A          325 PE-DDADITPVIDE  337 (505)
T ss_dssp             TT-TTCSBCCCSCH
T ss_pred             CC-CcCcCCcccCH
Confidence            99 99999999974

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=5.9e-74  Score=562.62  Aligned_cols=326  Identities=35%  Similarity=0.535  Sum_probs=307.3

Q ss_pred             CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922           16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      |.|+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.
T Consensus         2 ~~m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~   79 (478)
T 3ty7_A            2 NAMRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKE   79 (478)
T ss_dssp             -CCEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred             cchhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence            4456678999999999987788999999999999999999999999999999999999  89999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM  175 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~  175 (349)
                      |++++++|++++++|+|||+.++...|+..+++.++|+++...+..+...    ....+++++|+|||++|+|||||+..
T Consensus        80 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~  155 (478)
T 3ty7_A           80 YENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQ  155 (478)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHH
T ss_pred             HHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHH
Confidence            99999999999999999999999447999999999999998877665432    23467889999999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      .++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus       156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~  235 (478)
T 3ty7_A          156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM  235 (478)
T ss_dssp             HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred             HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       236 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  314 (478)
T 3ty7_A          236 EKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP  314 (478)
T ss_dssp             CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred             HHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence            99887 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +++++++|||+++
T Consensus       315 ~~~~~~~gpli~~  327 (478)
T 3ty7_A          315 REDGTQVGPIISK  327 (478)
T ss_dssp             TSTTCCBCCCSCH
T ss_pred             CCCCCccCCCcCH
Confidence            9999999999974

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=8.9e-74  Score=561.56  Aligned_cols=321  Identities=37%  Similarity=0.633  Sum_probs=304.4

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .++||||+|+.+.  ++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++++
T Consensus        13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   88 (487)
T 2w8n_A           13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD   88 (487)
T ss_dssp             CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            5689999999764  7899999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV  180 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~  180 (349)
                      +|++++++|+|||+.+++ .|+..+++.++|+++..++..++..+. ..+...+++++|+|||++|+|||||+...++++
T Consensus        89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~  167 (487)
T 2w8n_A           89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV  167 (487)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence            999999999999999998 599999999999999888776665443 233456889999999999999999999999999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      ++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+   |.+.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus       168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~  247 (487)
T 2w8n_A          168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH  247 (487)
T ss_dssp             HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999   8677889999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc-ccccCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF  336 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~-l~~g~p~  336 (349)
                      ++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++|||+
T Consensus       248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~  326 (487)
T 2w8n_A          248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF  326 (487)
T ss_dssp             HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred             Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence            987 89999999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      ++++++|||+++
T Consensus       327 ~~~~~~gpli~~  338 (487)
T 2w8n_A          327 EEGTTQGPLINE  338 (487)
T ss_dssp             STTCCBCCCSSH
T ss_pred             cccCcccCCCCH
Confidence            999999999984

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.4e-73  Score=560.85  Aligned_cols=326  Identities=28%  Similarity=0.457  Sum_probs=305.7

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++
T Consensus         4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   81 (485)
T 4dng_A            4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHE   81 (485)
T ss_dssp             GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence            4566899999999877788999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc--CCccceEEeecceeEEEEcCCCccHHhh
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF  176 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~  176 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|+++..+.+.+...+..  .+...+++++|+|||++|+|||||+...
T Consensus        82 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~  160 (485)
T 4dng_A           82 NRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLS  160 (485)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHH
Confidence            999999999999999999998 4999999999999999887766654432  2356788999999999999999999999


Q ss_pred             HHHHHhHHhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       177 ~~~~~~AL~aGN~vvlkps~~~~~t~-~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      ++++++||++||+||+|||+.+|+++ ..|+++|.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|+
T Consensus       161 ~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~  240 (485)
T 4dng_A          161 MRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG  240 (485)
T ss_dssp             HHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHH
Confidence            99999999999999999999999999 99999999999999999999998778999999999999999999999999999


Q ss_pred             HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus       241 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~  319 (485)
T 4dng_A          241 EIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ  319 (485)
T ss_dssp             HHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred             HHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence            99987 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +|+++++|||+++
T Consensus       320 ~~~~~~~gpli~~  332 (485)
T 4dng_A          320 TDPKTVVGPLINE  332 (485)
T ss_dssp             TSTTCSBCCCSSH
T ss_pred             CcCCCccCCCCCH
Confidence            9999999999974

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=3.5e-73  Score=557.53  Aligned_cols=324  Identities=32%  Similarity=0.512  Sum_probs=304.6

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      |..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.+|..+|.++|+++++.|++
T Consensus         3 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   80 (486)
T 1t90_A            3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQ   80 (486)
T ss_dssp             CCBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence            4456789999999876677899999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.+++ .|+..+++.++|++...+.+.++..+ ...+...+++++|+|||++|+|||||+...+
T Consensus        81 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~  159 (486)
T 1t90_A           81 HKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPC  159 (486)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHH
Confidence            999999999999999999987 69999999999998776666655433 2233456788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++| +.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus       160 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~  238 (486)
T 1t90_A          160 WMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKK  238 (486)
T ss_dssp             HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 56789999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCce-EEEecccHHHHHHHHHHHhhcccccCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPF  336 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~~~~~f~~~l~~~~~~l~~g~p~  336 (349)
                      ++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|.++++++++|+|+
T Consensus       239 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~  316 (486)
T 1t90_A          239 GSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL  316 (486)
T ss_dssp             HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred             Hhc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence            988 89999999999999999999999999999999999999999999999 999999 999999999999999999999


Q ss_pred             CCCCcccccCCC
Q 018922          337 DPAVRQGPQVLI  348 (349)
Q Consensus       337 ~~~~~~Gpl~~~  348 (349)
                      ++++++|||+++
T Consensus       317 ~~~~~~gpli~~  328 (486)
T 1t90_A          317 DDGVFLGPVIRE  328 (486)
T ss_dssp             STTCCBCCCSCH
T ss_pred             ccCCccCCCCCH
Confidence            999999999984

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=3e-73  Score=561.47  Aligned_cols=321  Identities=29%  Similarity=0.489  Sum_probs=302.4

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      .+++||||+|+.+  +++++++||+ ||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~  112 (516)
T 1uzb_A           37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR  112 (516)
T ss_dssp             EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence            4578999999963  5689999999 6999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee--ccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      +++|++++++|+|||+.+++ .|+..+++.++||++.++++.+...+  ...+...++.++|+|||++|+|||||+...+
T Consensus       113 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~  191 (516)
T 1uzb_A          113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT  191 (516)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence            99999999999999999998 69999999999999988877765422  1123456788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus       192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~  271 (516)
T 1uzb_A          192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA  271 (516)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999878899999999999999999999999999999


Q ss_pred             Hh------hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          258 AA------TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       258 ~a------~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      ++      . ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus       272 aa~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~  350 (516)
T 1uzb_A          272 AGRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS  350 (516)
T ss_dssp             HTSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred             hhhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhcc
Confidence            87      4 7999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccCCC
Q 018922          332 VGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       332 ~g~p~~~~~~~Gpl~~~  348 (349)
                      +||| ++++++|||+++
T Consensus       351 ~G~p-~~~~~~Gpli~~  366 (516)
T 1uzb_A          351 VGPA-EENPDLGPVVSA  366 (516)
T ss_dssp             BSCG-GGCCSBCCCSCH
T ss_pred             CCCC-ccccccCCCCCH
Confidence            9999 999999999984

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=3.7e-73  Score=556.25  Aligned_cols=320  Identities=30%  Similarity=0.483  Sum_probs=301.3

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      +.+++||||+|+.+.+  +++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus         3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   78 (475)
T 1euh_A            3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD   78 (475)
T ss_dssp             CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence            4568999999997644  899999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CC----ccc-eEEeecceeEEEEcCCCccH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT  173 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~  173 (349)
                      +++|++++++|+|||+.+++ .|+..+++.++|+++..+++.++..+.. .+    ... ++.++|+|||++|+|||||+
T Consensus        79 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~  157 (475)
T 1euh_A           79 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV  157 (475)
T ss_dssp             HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence            99999999999999999987 6999999999999998877666544432 22    344 88999999999999999999


Q ss_pred             HhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922          174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ  253 (349)
Q Consensus       174 ~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~  253 (349)
                      ...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.
T Consensus       158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~  237 (475)
T 1euh_A          158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER  237 (475)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence            99999999999999999999999999999999999999999999999999977778999999999999999999999999


Q ss_pred             HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922          254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG  333 (349)
Q Consensus       254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g  333 (349)
                      |++.++   +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus       238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g  314 (475)
T 1euh_A          238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG  314 (475)
T ss_dssp             HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred             HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence            999875   79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCC
Q 018922          334 DPFDPAVRQGPQVLI  348 (349)
Q Consensus       334 ~p~~~~~~~Gpl~~~  348 (349)
                      ||++ ++++|||+++
T Consensus       315 ~p~~-~~~~gpli~~  328 (475)
T 1euh_A          315 NPED-DADITPLIDT  328 (475)
T ss_dssp             CGGG-TCSBCCCSCH
T ss_pred             Cccc-cCccCCCCCH
Confidence            9999 9999999984

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=4.2e-73  Score=555.87  Aligned_cols=315  Identities=31%  Similarity=0.550  Sum_probs=293.7

Q ss_pred             eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922           24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL  103 (349)
Q Consensus        24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l  103 (349)
                      +||||+|+.+  ++ ++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|
T Consensus         2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el   76 (486)
T 3pqa_A            2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL   76 (486)
T ss_dssp             -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999975  45 99999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922          104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA  183 (349)
Q Consensus       104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A  183 (349)
                      ++++++|+|||+.+++ .|+..+++.++|++...+++.++..+.. +...+++++|+|||++|+|||||+...++++++|
T Consensus        77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A  154 (486)
T 3pqa_A           77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA  154 (486)
T ss_dssp             HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence            9999999999999998 6999999999999999888766554433 4567889999999999999999999999999999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~~~l~~a----glP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      |++||+||+|||+.+|+++..+++++.++    |+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus       155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa  234 (486)
T 3pqa_A          155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG  234 (486)
T ss_dssp             HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred             HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence            99999999999999999999999999999    99999999999988888999999999999999999999999998875


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                         +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++
T Consensus       235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~  311 (486)
T 3pqa_A          235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK  311 (486)
T ss_dssp             ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred             ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence               79999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       312 ~~~gpli~~  320 (486)
T 3pqa_A          312 TDVGPLISV  320 (486)
T ss_dssp             CSBCCCSCH
T ss_pred             CCcCCCCCH
Confidence            999999974

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=7e-73  Score=557.88  Aligned_cols=326  Identities=36%  Similarity=0.556  Sum_probs=307.6

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++
T Consensus        10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~   87 (508)
T 3r64_A           10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE   87 (508)
T ss_dssp             BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence            4556899999999877788999999999999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc--CCccceEEeecceeEEEEcCCCccHHhh
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF  176 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~  176 (349)
                      ++++|++++++|+|||..+++ .|+..+++.++|++...+...+ ..+..  .+...+++++|+|||++|+|||||+...
T Consensus        88 ~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~  165 (508)
T 3r64_A           88 HREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS  165 (508)
T ss_dssp             THHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred             hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence            999999999999999999998 5999999999999998877665 44432  2356788999999999999999999999


Q ss_pred             HHHHHhHHhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       177 ~~~~~~AL~aGN~vvlkps~~~~~t~-~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      ++++++||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+++|++.++++.|++||+|+.|+||||+.+|+.|+
T Consensus       166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~  245 (508)
T 3r64_A          166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG  245 (508)
T ss_dssp             HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence            99999999999999999999999999 99999999999999999999997788999999999999999999999999999


Q ss_pred             HHHhhC-CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          256 QAAATS-NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       256 ~~~a~~-~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      +.++.. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus       246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~  325 (508)
T 3r64_A          246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD  325 (508)
T ss_dssp             HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred             HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence            888742 5799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+++
T Consensus       326 p~~~~~~~gpli~~  339 (508)
T 3r64_A          326 PSAEGTLVGPVIND  339 (508)
T ss_dssp             TTSSSCCBCCCSCH
T ss_pred             CccCCCcccCCCCH
Confidence            99999999999974

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=1.1e-72  Score=555.49  Aligned_cols=322  Identities=28%  Similarity=0.453  Sum_probs=302.0

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      .+++.||||+|+.  ++++++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++
T Consensus        22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~   97 (500)
T 2j6l_A           22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK   97 (500)
T ss_dssp             SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence            4678999999994  567899999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM  178 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~  178 (349)
                      +++|++++++|+|||+.++. .|+..+++.++|+++..+++.++..+.. .+...+++++|+|||++|+|||||+...++
T Consensus        98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~  176 (500)
T 2j6l_A           98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW  176 (500)
T ss_dssp             HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence            99999999999999999986 6999999999999998877666544322 233457789999999999999999999999


Q ss_pred             HHHhHHhcCCeEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922          179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV  254 (349)
Q Consensus       179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~----~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i  254 (349)
                      ++++||++||+||+|||+.+|+++..+++++.    ++|+|+|++|+|+| +.++++.|+.||+|+.|+||||+.+|+.|
T Consensus       177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i  255 (500)
T 2j6l_A          177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV  255 (500)
T ss_dssp             HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred             HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence            99999999999999999999999999888765    56999999999999 78899999999999999999999999999


Q ss_pred             HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922          255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~  334 (349)
                      ++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus       256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~  334 (500)
T 2j6l_A          256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN  334 (500)
T ss_dssp             HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred             HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence            999988 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCC
Q 018922          335 PFDPAVRQGPQVLI  348 (349)
Q Consensus       335 p~~~~~~~Gpl~~~  348 (349)
                      |+++++++|||+++
T Consensus       335 p~~~~~~~gpli~~  348 (500)
T 2j6l_A          335 PWDPNVLYGPLHTK  348 (500)
T ss_dssp             TTSTTCCBCCCSCH
T ss_pred             cccCCCccccCCCH
Confidence            99999999999984

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=9.1e-73  Score=555.81  Aligned_cols=320  Identities=29%  Similarity=0.443  Sum_probs=301.5

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      .+++||||+|+.+.  ++++++||+||+++++++.++.+|+++++++|++||+. .|+.++..+|.++|+++++.|++++
T Consensus        18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~   94 (501)
T 1uxt_A           18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL   94 (501)
T ss_dssp             EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence            45789999999763  78999999999999999999999999999999999971 3999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc---C--CccceEEeecceeEEEEcCCCccHHh
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTM  175 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~P~GVv~~i~p~n~P~~~  175 (349)
                      ++|++++++|+|||+.+++ .|+..+++.++|+++..+++.++..+..   .  ....+++++|+|||++|+|||||+..
T Consensus        95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~  173 (501)
T 1uxt_A           95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD  173 (501)
T ss_dssp             HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred             HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence            9999999999999999998 6999999999999998888766654432   2  23568899999999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      .++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+|+.|+||||+.+|+.|+
T Consensus       174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~  252 (501)
T 1uxt_A          174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV  252 (501)
T ss_dssp             HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999976 8899999999999999999999999999


Q ss_pred             HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922          256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP  335 (349)
Q Consensus       256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p  335 (349)
                      +.++   +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|||
T Consensus       253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p  329 (501)
T 1uxt_A          253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP  329 (501)
T ss_dssp             HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred             HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence            9875   7999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCC
Q 018922          336 FDPAVRQGPQVLI  348 (349)
Q Consensus       336 ~~~~~~~Gpl~~~  348 (349)
                      +++++++|||+++
T Consensus       330 ~~~~~~~Gpli~~  342 (501)
T 1uxt_A          330 RDPTVDVGPLISP  342 (501)
T ss_dssp             TSTTCSBCCCSCH
T ss_pred             cccCCcccCCCCH
Confidence            9999999999984

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.9e-72  Score=549.97  Aligned_cols=321  Identities=28%  Similarity=0.426  Sum_probs=302.3

Q ss_pred             cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922           22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE  101 (349)
Q Consensus        22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~  101 (349)
                      .++||||+|+.+. +..+.++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|+++++
T Consensus         6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~   82 (490)
T 3ju8_A            6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRAD   82 (490)
T ss_dssp             CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred             cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            3789999999763 46789999999999999999999999999999999999  89999999999999999999999999


Q ss_pred             HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922          102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS  181 (349)
Q Consensus       102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~  181 (349)
                      +|++++++|+|||+.+++ .|+..+++.++|++...+...+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus        83 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~  161 (490)
T 3ju8_A           83 ELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIV  161 (490)
T ss_dssp             HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHH
Confidence            999999999999999998 6999999999999988877766654322334456779999999999999999999999999


Q ss_pred             hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+|+.|+||||+.+|+.|++.++. 
T Consensus       162 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-  239 (490)
T 3ju8_A          162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-  239 (490)
T ss_dssp             HHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-
T ss_pred             HHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-
Confidence            9999999999999999999999999999999999999999999 67899999999999999999999999999999887 


Q ss_pred             CCcce-EEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEeccc-HHHHHHHHHHHhhcccccC-CCCC
Q 018922          262 NLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDP  338 (349)
Q Consensus       262 ~~~~~-~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~-~~~f~~~l~~~~~~l~~g~-p~~~  338 (349)
                      +++|+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|.++++++++|+ |+++
T Consensus       240 ~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~  319 (490)
T 3ju8_A          240 QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP  319 (490)
T ss_dssp             CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred             cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence            88998 7999999999999999999999999999999999999999999999996 9999999999999999999 9999


Q ss_pred             CCcccccCCC
Q 018922          339 AVRQGPQVLI  348 (349)
Q Consensus       339 ~~~~Gpl~~~  348 (349)
                      ++++|||+++
T Consensus       320 ~~~~Gpli~~  329 (490)
T 3ju8_A          320 APFMGAVISL  329 (490)
T ss_dssp             CCSBCCCSCH
T ss_pred             cCccccccCH
Confidence            9999999974

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=6.3e-72  Score=547.28  Aligned_cols=306  Identities=27%  Similarity=0.421  Sum_probs=293.8

Q ss_pred             eEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 018922           38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW  117 (349)
Q Consensus        38 ~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~  117 (349)
                      +++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus         5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e   82 (484)
T 3ros_A            5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE   82 (484)
T ss_dssp             CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred             ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence            488999999999999999999999999999999999  899999999999999999999999999999999999999999


Q ss_pred             hhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCC
Q 018922          118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ  197 (349)
Q Consensus       118 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~  197 (349)
                      ++ .|+..+++.++|+++.++++.+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus        83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~  161 (484)
T 3ros_A           83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN  161 (484)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence            98 69999999999999998887776555444556789999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922          198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (349)
Q Consensus       198 ~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i  277 (349)
                      +|+++..|++++.++|+|+|++|+|+|++.++++ |+.||+|+.|+||||+.+|+.|++.+++ ++||+++|+|||||+|
T Consensus       162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i  239 (484)
T 3ros_A          162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI  239 (484)
T ss_dssp             CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred             ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence            9999999999999999999999999998778888 9999999999999999999999999998 8999999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++++++|||+++
T Consensus       240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  310 (484)
T 3ros_A          240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSE  310 (484)
T ss_dssp             ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCH
T ss_pred             eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999974

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=1.4e-71  Score=552.12  Aligned_cols=324  Identities=24%  Similarity=0.322  Sum_probs=300.5

Q ss_pred             ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE   97 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~   97 (349)
                      ...+++||||+|+.+.  ..+.++||+| ++++++++.++.+|+++|+++|++||+  .|++++..+|.++|++++++|+
T Consensus        61 ~~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~  136 (563)
T 4e3x_A           61 TEAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS  136 (563)
T ss_dssp             CEECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence            3567899999999753  3678899998 799999999999999999999999999  8999999999999999999999


Q ss_pred             Hh-HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceEEeecceeEEEEcCCCccHHh
Q 018922           98 EH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTM  175 (349)
Q Consensus        98 ~~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~  175 (349)
                      ++ +++|++++++|+|||+.++...++..+++.++|++..+.++.+.... .......+.++.|+|||++|+|||||+..
T Consensus       137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~  216 (563)
T 4e3x_A          137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG  216 (563)
T ss_dssp             TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred             hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence            98 99999999999999999998545999999999999998887664322 12233456677888999999999999999


Q ss_pred             hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922          176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM  255 (349)
Q Consensus       176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~  255 (349)
                      ..++++||| +||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus       217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~  295 (563)
T 4e3x_A          217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW  295 (563)
T ss_dssp             HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence            999999999 5999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHhhCCCc------ceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc
Q 018922          256 QAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA  329 (349)
Q Consensus       256 ~~~a~~~~~------~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~  329 (349)
                      +.++. ++|      |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++
T Consensus       296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~  374 (563)
T 4e3x_A          296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR  374 (563)
T ss_dssp             HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred             HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence            99998 777      49999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCC-CCCCCcccccCCC
Q 018922          330 WVVGDP-FDPAVRQGPQVLI  348 (349)
Q Consensus       330 l~~g~p-~~~~~~~Gpl~~~  348 (349)
                      +++||| +|+++++||||++
T Consensus       375 l~vGdp~~d~~~~~Gpli~~  394 (563)
T 4e3x_A          375 IKVGDPAEDFGTFFSAVIDA  394 (563)
T ss_dssp             CCBSCTTTCTTCSBCCCSCH
T ss_pred             ccCCCcccCcCCccCCCcCH
Confidence            999999 9999999999984

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=3.4e-70  Score=570.14  Aligned_cols=324  Identities=32%  Similarity=0.487  Sum_probs=305.8

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      ..+++||||+|+.  ++++++++||+| ++++++++.++.+|+++|+++|++||+  .|+.+|..+|.++|++++++|++
T Consensus       530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~  605 (1026)
T 4f9i_A          530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK  605 (1026)
T ss_dssp             EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence            3567899999997  357899999998 999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      ++++|++++++|+|||+.++. .|+..+++.++||+..++++.+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus       606 ~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~  684 (1026)
T 4f9i_A          606 RLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM  684 (1026)
T ss_dssp             THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred             HHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence            999999999999999999998 699999999999999988876554332 234556788999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|+.|++.
T Consensus       685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~  764 (1026)
T 4f9i_A          685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER  764 (1026)
T ss_dssp             HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             Hhh-----CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       258 ~a~-----~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      ++.     .++||+++|+|||||+||++|||+|.|++.++.|+|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus       765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v  844 (1026)
T 4f9i_A          765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV  844 (1026)
T ss_dssp             HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred             hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence            873     368999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccCCC
Q 018922          333 GDPFDPAVRQGPQVLI  348 (349)
Q Consensus       333 g~p~~~~~~~Gpl~~~  348 (349)
                      |+|+++++++||||++
T Consensus       845 G~p~d~~t~~Gpvi~~  860 (1026)
T 4f9i_A          845 GPSEDPANYMGAVADD  860 (1026)
T ss_dssp             CCTTSTTCSBCCCSSH
T ss_pred             CCcccccCccccccCH
Confidence            9999999999999984

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=1.6e-69  Score=529.36  Aligned_cols=308  Identities=27%  Similarity=0.431  Sum_probs=292.2

Q ss_pred             CCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch
Q 018922           36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH  115 (349)
Q Consensus        36 ~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~  115 (349)
                      ..+++++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+
T Consensus         6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~   83 (462)
T 3etf_A            6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPI   83 (462)
T ss_dssp             CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred             cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence            45689999999999999999999999999999999999  8999999999999999999999999999999999999999


Q ss_pred             hhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecC
Q 018922          116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA  195 (349)
Q Consensus       116 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps  195 (349)
                      .+++ .|+..+++.++|+++..+...+.......+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus        84 ~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps  162 (462)
T 3etf_A           84 KQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHA  162 (462)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred             HHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECC
Confidence            9998 699999999999999887776654222234556889999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCc
Q 018922          196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP  275 (349)
Q Consensus       196 ~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~  275 (349)
                      +.+|.++..++++|.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.++. ++||+++|+|||||
T Consensus       163 ~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p  240 (462)
T 3etf_A          163 PNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP  240 (462)
T ss_dssp             TTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEE
T ss_pred             CCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCc
Confidence            99999999999999999999999999999 56788999999999999999999999999999998 89999999999999


Q ss_pred             eeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       276 ~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus       241 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~  313 (462)
T 3etf_A          241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARF  313 (462)
T ss_dssp             EEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCH
T ss_pred             cEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999974

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=7.6e-70  Score=539.63  Aligned_cols=319  Identities=24%  Similarity=0.343  Sum_probs=290.1

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      .+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+  .|+.++..+|.++|+++++.|+++
T Consensus         7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~   82 (534)
T 2y53_A            7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK   82 (534)
T ss_dssp             ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence            468999999997644 479999999999999999998 9999999999999 58  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCce-------eecc--CCccceEEeecc-eeEEEEcCC
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-------LKMS--RALQGYTLREPI-GVVGHIIPW  169 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~P~-GVv~~i~p~  169 (349)
                      +++|++++++|+|||+.++. .|+..+++.++||+...+++.+..       .+..  .....++.++|+ |||++|+||
T Consensus        83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw  161 (534)
T 2y53_A           83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF  161 (534)
T ss_dssp             HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred             HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence            99999999999999999987 599999999999998876664321       1211  111346789997 999999999


Q ss_pred             CccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcC-CCCCEEEEeCC
Q 018922          170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGS  247 (349)
Q Consensus       170 n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~ag-lP~gvv~~v~g~~~~~~~~l~~~-~~v~~v~ftGs  247 (349)
                      |||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+    +..+ ++++.|+||||
T Consensus       162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS  237 (534)
T 2y53_A          162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS  237 (534)
T ss_dssp             TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred             chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence            99999999999999999999999999999999999999999999 899999999996543    3333 67999999999


Q ss_pred             hHHHHHHHHHHh-hCCCcceEEeCCCCCceeEcCCC-----CHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHH
Q 018922          248 TDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK  321 (349)
Q Consensus       248 ~~~g~~i~~~~a-~~~~~~~~le~gG~~~~iV~~da-----d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~  321 (349)
                      +.+|+.|++.++ ..++||+++|+|||||+||++||     |+|.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus       238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~  317 (534)
T 2y53_A          238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE  317 (534)
T ss_dssp             HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred             HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence            999999998874 23899999999999999999999     999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccccCCCCCCCcccccCCC
Q 018922          322 KLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       322 ~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +|.++++++++|||+++++++|||+++
T Consensus       318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~  344 (534)
T 2y53_A          318 ALKAKLAKITVGNPRNDAVRMGSLVSR  344 (534)
T ss_dssp             HHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred             HHHHHHHhccCCCCCcCCCCccCCCCH
Confidence            999999999999999999999999985

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=4.4e-68  Score=520.19  Aligned_cols=307  Identities=29%  Similarity=0.432  Sum_probs=285.2

Q ss_pred             CCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 018922           34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK  113 (349)
Q Consensus        34 ~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk  113 (349)
                      ...++++++||+||+++++++.++.+|+++|+++|++||+  .|++++.++|.++|+++++.|++|+++|++++++|+||
T Consensus         3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk   80 (474)
T 4h7n_A            3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR   80 (474)
T ss_dssp             CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred             CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            3557899999999999999999999999999999999999  89999999999999999999999999999999999999


Q ss_pred             chhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-cc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEE
Q 018922          114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI  191 (349)
Q Consensus       114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vv  191 (349)
                      +... . .|+...++.+++++....++...... .. ........++|+|||++|+|||||+...++++++||++||+||
T Consensus        81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV  158 (474)
T 4h7n_A           81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV  158 (474)
T ss_dssp             SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred             cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence            8654 4 59999999999999887665443322 11 2344567789999999999999999999999999999999999


Q ss_pred             EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC
Q 018922          192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG  271 (349)
Q Consensus       192 lkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~g  271 (349)
                      +|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.|  ++.|+||||+.+|+.|++.++. ++||+++|+|
T Consensus       159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG  234 (474)
T 4h7n_A          159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG  234 (474)
T ss_dssp             EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred             ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence            999999999999999999999999999999999 67788899876  8999999999999999999998 8999999999


Q ss_pred             CCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       272 G~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      ||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus       235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~  311 (474)
T 4h7n_A          235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAE  311 (474)
T ss_dssp             CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSH
T ss_pred             CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999974

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-67  Score=520.80  Aligned_cols=316  Identities=25%  Similarity=0.308  Sum_probs=286.7

Q ss_pred             ccccccceeecCeeeeCCCCCeEEeecCCCCceeE-EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922           17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        17 ~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~-~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      .++...++||||+|+.+.+     ++||+||++++ +++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.
T Consensus        25 ~~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~   97 (528)
T 3v4c_A           25 IFTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADE   97 (528)
T ss_dssp             SCCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHH
T ss_pred             hcccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHH
Confidence            3456678999999997532     99999999998 9999999999999999999999  89999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhh--cCceee----cc---CCccceEEeecceeEEEE
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----MS---RALQGYTLREPIGVVGHI  166 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~~---~~~~~~~~~~P~GVv~~i  166 (349)
                      |++++++|++++++|+|||+.+++ .|+..+++.++|+++..++.  .....+    ..   .+...+++++|+|||++|
T Consensus        98 l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I  176 (528)
T 3v4c_A           98 IEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVF  176 (528)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEE
T ss_pred             HHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEE
Confidence            999999999999999999999988 69999999999999988762  222211    00   123457889999999999


Q ss_pred             cCCCccHHhhH--HHHHhHHhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCC
Q 018922          167 IPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDID  240 (349)
Q Consensus       167 ~p~n~P~~~~~--~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l----~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~  240 (349)
                      +|||||+...+  +++++||++||+||+|||+.+|+++..+++++    .++|+|+|++|+|+|.+.++++.|+.||+|+
T Consensus       177 ~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~  256 (528)
T 3v4c_A          177 GASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIK  256 (528)
T ss_dssp             CCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCC
T ss_pred             CCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCC
Confidence            99999999865  89999999999999999999999999998865    5789999999999998888999999999999


Q ss_pred             EEEEeCChHHHHHHHHHHhhCCC--cceEEeCCCCCceeEcCCC---CHHHHHHHHHHHHhhhcCCCcccCceEEEecc-
Q 018922          241 KVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-  314 (349)
Q Consensus       241 ~v~ftGs~~~g~~i~~~~a~~~~--~~~~le~gG~~~~iV~~da---d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-  314 (349)
                      .|+||||+.+|+.|++.++. ++  ||+++|+|||||+||++||   |++.|++.++.++|.|+||.|++++|||||++ 
T Consensus       257 ~V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~  335 (528)
T 3v4c_A          257 AVGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGA  335 (528)
T ss_dssp             EEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSH
T ss_pred             EEEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEeccc
Confidence            99999999999999999988 78  9999999999999999999   88999999999999999999999999999997 


Q ss_pred             cHHHHHHHHHHHhhcccccCCCCCCCcccccCC
Q 018922          315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVL  347 (349)
Q Consensus       315 ~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~  347 (349)
                      +||+|+++|.+++++++.|      +.+||+++
T Consensus       336 i~d~f~~~l~~~~~~~~~~------~~~gp~~~  362 (528)
T 3v4c_A          336 DADRFTTAAVEALAKVAPQ------TMLTDGIA  362 (528)
T ss_dssp             HHHHHHHHHHHHHHTCCCE------ECSCHHHH
T ss_pred             HHHHHHHHHHHHHHhcccC------CCCCHHHH
Confidence            9999999999999998765      46788764

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=1.4e-65  Score=500.32  Aligned_cols=301  Identities=25%  Similarity=0.384  Sum_probs=266.0

Q ss_pred             CeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 018922           37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS  116 (349)
Q Consensus        37 ~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~  116 (349)
                      ..++++||+||+++++++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||+.
T Consensus         6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~   83 (457)
T 3lns_A            6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD   83 (457)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred             ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence            4578999999999999999999999999999999999  89999999999999999999999999999999999999999


Q ss_pred             hhhhCcHHHHHHHHHHHHHhhhhhcCce-eec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEE
Q 018922          117 WAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV  192 (349)
Q Consensus       117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvl  192 (349)
                      +++..|+..+++.++|+++..+.+.... .+.   ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus        84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl  163 (457)
T 3lns_A           84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII  163 (457)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence            9875599999999999998887665432 211   123456889999999999999999999999999999999999999


Q ss_pred             ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCC
Q 018922          193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG  272 (349)
Q Consensus       193 kps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG  272 (349)
                      |||+.+|+++..+++++.++ +|+|++|+++| +.+.++.|++ ++|+.|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus       164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG  239 (457)
T 3lns_A          164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG  239 (457)
T ss_dssp             ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred             ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence            99999999999999999999 99999999999 7788999998 799999999999999999999988 89999999999


Q ss_pred             CCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       273 ~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      |||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++   |+++  ++|||+++
T Consensus       240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~  310 (457)
T 3lns_A          240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTE  310 (457)
T ss_dssp             CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSH
T ss_pred             CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCH
Confidence            99999999999999999999999999999999999999999999999999999999988   7776  99999974

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=1.8e-64  Score=498.43  Aligned_cols=297  Identities=23%  Similarity=0.315  Sum_probs=272.0

Q ss_pred             CCCCCeEEeecCCCCcee-EEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 018922           33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA  111 (349)
Q Consensus        33 ~~~~~~~~~~~P~~g~~i-~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~  111 (349)
                      +.++++++++||+||+++ ++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus         3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~   80 (510)
T 1ez0_A            3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET   80 (510)
T ss_dssp             --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence            345678999999999999 79999999999999999999999  899999999999999999999999999999999999


Q ss_pred             CCchhhhhhCcHHHHHHHHHHHHHhhhh--hcCceee----c--cCC-ccceEEeecceeEEEEcCCCccHHhh--HHHH
Q 018922          112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLK----M--SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV  180 (349)
Q Consensus       112 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~  180 (349)
                      |||+.++. .|+..+++.++|+++.+++  ..+....    .  ... ...+++++|+|||++|+|||||+...  .+++
T Consensus        81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~  159 (510)
T 1ez0_A           81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT  159 (510)
T ss_dssp             CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred             CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence            99999886 6999999999999988875  3332221    1  111 13478899999999999999999985  4999


Q ss_pred             HhHHhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 018922          181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (349)
Q Consensus       181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l----~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~  256 (349)
                      ++||++||+||+|||+.+|+++..+++++    .++|+|+|++|+++|.+.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus       160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~  239 (510)
T 1ez0_A          160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN  239 (510)
T ss_dssp             HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred             HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence            99999999999999999999999999987    56899999999999977889999999999999999999999999999


Q ss_pred             HHhhCCC--cceEEeCCCCCceeEcCCCCHH--HHHHHHHHHHhhhcCCCcccCceEEEecc-cHHHHHHHHHHHhhccc
Q 018922          257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       257 ~~a~~~~--~~~~le~gG~~~~iV~~dad~~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~~~l~  331 (349)
                      .++. ++  ||+++|+|||||+||++|||+|  .|++.+++++|.|+||.|++++|||||++ ++|+|+++|.+++++++
T Consensus       240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~  318 (510)
T 1ez0_A          240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS  318 (510)
T ss_dssp             HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred             Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence            9987 64  9999999999999999999999  99999999999999999999999999999 99999999999999998


Q ss_pred             cc
Q 018922          332 VG  333 (349)
Q Consensus       332 ~g  333 (349)
                      +|
T Consensus       319 ~g  320 (510)
T 1ez0_A          319 PS  320 (510)
T ss_dssp             CB
T ss_pred             CC
Confidence            75

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=2.6e-63  Score=517.33  Aligned_cols=292  Identities=32%  Similarity=0.462  Sum_probs=277.2

Q ss_pred             EcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHH
Q 018922           53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY  132 (349)
Q Consensus        53 ~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~  132 (349)
                      ++.++.+|+++++++|++||+  .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|
T Consensus       544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~  620 (1001)
T 3haz_A          544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY  620 (1001)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence            789999999999999999999  89999999999999999999999999999999999999999997 699999999999


Q ss_pred             HHHhhhhhcCcee--eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH
Q 018922          133 YAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (349)
Q Consensus       133 ~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~  210 (349)
                      |+...+...+...  +...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus       621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~  700 (1001)
T 3haz_A          621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH  700 (1001)
T ss_dssp             HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence            9999887765432  22335567889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC--CCcceEEeCCCCCceeEcCCCCHHHHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA  288 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~~~~le~gG~~~~iV~~dad~~~a~  288 (349)
                      ++|+|+|++|+|+|++.+ +..|+.||+|+.|+||||+++|+.|++.++++  +++|+++|+|||||+||++|||+|.|+
T Consensus       701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa  779 (1001)
T 3haz_A          701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA  779 (1001)
T ss_dssp             HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred             HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence            999999999999997777 99999999999999999999999999998863  489999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +.++.++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++||||++
T Consensus       780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~  839 (1001)
T 3haz_A          780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDV  839 (1001)
T ss_dssp             HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCH
T ss_pred             HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999974

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=7.2e-63  Score=481.81  Aligned_cols=287  Identities=26%  Similarity=0.345  Sum_probs=260.7

Q ss_pred             CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 018922           55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA  134 (349)
Q Consensus        55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~  134 (349)
                      ..+.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.+++++
T Consensus        14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~   91 (469)
T 3sza_A           14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI   91 (469)
T ss_dssp             ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3456799999999999999  89999999999999999999999999999999999999999987679999999999888


Q ss_pred             HhhhhhcCcee----eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH
Q 018922          135 GAADKIHGEVL----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK  210 (349)
Q Consensus       135 ~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~  210 (349)
                      +..........    ........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~  171 (469)
T 3sza_A           92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP  171 (469)
T ss_dssp             HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence            76654432211    11123456889999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM  290 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~  290 (349)
                      ++ +|+|++|+++|. .+....|+.| +++.|+||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.
T Consensus       172 ~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~  247 (469)
T 3sza_A          172 QY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR  247 (469)
T ss_dssp             HH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred             Hh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence            98 999999999994 4556678887 89999999999999999999987 89999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       291 i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      +++++|.|+||.|++++|||||+++||+|+++|.++++++ +|+|.++++++|||+++
T Consensus       248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~  304 (469)
T 3sza_A          248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISA  304 (469)
T ss_dssp             HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCH
T ss_pred             HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCH
Confidence            9999999999999999999999999999999999999998 59999999999999984

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=1.4e-58  Score=451.89  Aligned_cols=287  Identities=20%  Similarity=0.237  Sum_probs=249.7

Q ss_pred             EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH
Q 018922           52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR  131 (349)
Q Consensus        52 ~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~  131 (349)
                      .++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|.+++++|++++++|+|||..+++..+...+++.+.
T Consensus         5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~   82 (464)
T 3k9d_A            5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY   82 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence            3456688999999999999999  89999999999999999999999999999999999999998876434445555554


Q ss_pred             HHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHH----H
Q 018922          132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA----H  207 (349)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~----~  207 (349)
                      .+....+. .+ ..+.+.+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++    +
T Consensus        83 ~~~~~~~~-~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~  160 (464)
T 3k9d_A           83 NYIKDMKT-IG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE  160 (464)
T ss_dssp             HHHTTCCC-SE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             Hhhhcccc-cc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence            44332211 11 122234456688899999999999999999999999999999999999999999999999865    4


Q ss_pred             HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC-CCCceeEcCCCCHHH
Q 018922          208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT  286 (349)
Q Consensus       208 ~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~g-G~~~~iV~~dad~~~  286 (349)
                      ++.++|+|+|++|+|++++.+.++.|++||+|+.|+||||+.+    .+.++. ++||+ +|+| ||+|+||++|||++.
T Consensus       161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~  234 (464)
T 3k9d_A          161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR  234 (464)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred             HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence            5789999999999999988889999999999999999999984    445554 78998 7888 999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHh-------hcccccCCC-CCCCcccccCCC
Q 018922          287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVLI  348 (349)
Q Consensus       287 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~-------~~l~~g~p~-~~~~~~Gpl~~~  348 (349)
                      |++.+++++|+|+||.|++++|||||+++||+|+++|.++.       +.+++|+|+ ++++++||+++.
T Consensus       235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~  304 (464)
T 3k9d_A          235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVG  304 (464)
T ss_dssp             HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTT
T ss_pred             HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCH
Confidence            99999999999999999999999999999999999999986       567899998 778999999864

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.7e-58  Score=448.48  Aligned_cols=277  Identities=16%  Similarity=0.164  Sum_probs=227.8

Q ss_pred             EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------C
Q 018922           40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-------G  112 (349)
Q Consensus        40 ~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G  112 (349)
                      -++||+||+++++++.++.+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+       |
T Consensus        10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G   87 (463)
T 2h5g_A           10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA   87 (463)
T ss_dssp             -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred             CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence            4789999999999999999999999999999999  899999999999999999999999999999999999       7


Q ss_pred             Cchh----hhhhCcHHHHHHHHHHHHHhhhhhcCceeecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHh
Q 018922          113 KLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA  185 (349)
Q Consensus       113 k~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~  185 (349)
                      ||+.    ++. .|+..+++.++|+++.+++..+...+..   .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus        88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa  164 (463)
T 2h5g_A           88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA  164 (463)
T ss_dssp             HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred             CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence            9987    455 6999999999999988877766553322   2334578899999999999887 77766 89999999


Q ss_pred             cCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922          186 AGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS  261 (349)
Q Consensus       186 aGN~vvlkps~~~~~t~~~l~~~l~~a----glP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~  261 (349)
                      +||+||+|||+.+|+++..|++++.++    | |+|++|+|+| +.++++.|+.||+|+.|+||||+.+|+.|++.++  
T Consensus       165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--  240 (463)
T 2h5g_A          165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--  240 (463)
T ss_dssp             HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred             cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence            999999999999999999999999999    9 9999999999 7778999999999999999999999999998875  


Q ss_pred             CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHH-HHHHHHHHHh
Q 018922          262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD-EFEKKLVEKA  327 (349)
Q Consensus       262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~-~f~~~l~~~~  327 (349)
                       +||+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| .+.+++.+.+
T Consensus       241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~  305 (463)
T 2h5g_A          241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML  305 (463)
T ss_dssp             -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred             -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence             799999999999999999999999999999999999 999999999999999987 3555555554

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.2e-56  Score=434.95  Aligned_cols=264  Identities=20%  Similarity=0.280  Sum_probs=229.4

Q ss_pred             EcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHH-H
Q 018922           53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R  131 (349)
Q Consensus        53 ~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~  131 (349)
                      ++.++.+|+++++++|++||+  .|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+.+.+ +
T Consensus         1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~   78 (452)
T 3my7_A            1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN   78 (452)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999  8999999999999999999999999999999999999999998744677777766 3


Q ss_pred             HHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH-
Q 018922          132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK-  210 (349)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~-  210 (349)
                      ++...  ...+ ..+.+.....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. 
T Consensus        79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~  155 (452)
T 3my7_A           79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD  155 (452)
T ss_dssp             HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence            33321  1111 1222233446788999999999999999999999999999999999999999999999998888765 


Q ss_pred             ---HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHH
Q 018922          211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA  287 (349)
Q Consensus       211 ---~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a  287 (349)
                         ++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+++    .++. ++||+++|+|||+|+||++|||+++|
T Consensus       156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A  230 (452)
T 3my7_A          156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA  230 (452)
T ss_dssp             HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred             HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence               799999999999998888999999999999999999998644    4444 78999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHH
Q 018922          288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK  326 (349)
Q Consensus       288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~  326 (349)
                      ++.++.++|+|+||.|++++|||||+++||+|+++|.++
T Consensus       231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~  269 (452)
T 3my7_A          231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH  269 (452)
T ss_dssp             HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999875

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=1.5e-55  Score=427.99  Aligned_cols=269  Identities=22%  Similarity=0.227  Sum_probs=232.3

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHH
Q 018922           58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA  126 (349)
Q Consensus        58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~  126 (349)
                      .+|+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+||+..    ++..       .|+..+
T Consensus        25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~  102 (444)
T 4ghk_A           25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM  102 (444)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence            5789999999999999  89999999999999999999999999999999999999853    4432       378899


Q ss_pred             HHHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHH
Q 018922          127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL  203 (349)
Q Consensus       127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~  203 (349)
                      ++.+++++.+.+.. +...+.   ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus       103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~  179 (444)
T 4ghk_A          103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT  179 (444)
T ss_dssp             HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred             HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence            99999999876542 333332   23455688999999999999998 8 688999999999999999999999999999


Q ss_pred             HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE
Q 018922          204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI  278 (349)
Q Consensus       204 ~l~~~l----~~aglP~gvv~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV  278 (349)
                      .+++++    .++|+|+|++|+++|.+. .+++.|..||+|+.|+||||+.+|+.|++.+    +||+++|+|||||+||
T Consensus       180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV  255 (444)
T 4ghk_A          180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV  255 (444)
T ss_dssp             HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred             HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence            999986    799999999999998554 5788888999999999999999999998775    6899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc---cCCC
Q 018922          279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPF  336 (349)
Q Consensus       279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~---g~p~  336 (349)
                      ++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.++++++++   |||.
T Consensus       256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~  315 (444)
T 4ghk_A          256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD  315 (444)
T ss_dssp             CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred             CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence            9999999999999999999999 9999999999999999999999999999998   8764

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=8.1e-56  Score=431.62  Aligned_cols=266  Identities=17%  Similarity=0.191  Sum_probs=238.3

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhhCcHHH-HHHHHHHHH
Q 018922           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA  134 (349)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~~  134 (349)
                      .+++++++|++||+  .|+.++..+|.++|+++++.|++++++|++++++|+|||.    .++...|+.. +++.+++++
T Consensus        15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a   92 (468)
T 1vlu_A           15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML   92 (468)
T ss_dssp             HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred             hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence            58899999999999  8999999999999999999999999999999999999998    7765458888 888899988


Q ss_pred             Hhhhhhc------Cceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHH
Q 018922          135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF  205 (349)
Q Consensus       135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l  205 (349)
                      +..+.+.      ++..+.   +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus        93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l  170 (468)
T 1vlu_A           93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM  170 (468)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence            8776665      443331   12344678999999999999999 9 99999999999999999999999999999999


Q ss_pred             HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922          206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (349)
Q Consensus       206 ~~~l~----~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i  277 (349)
                      ++++.    +    +|+|+|++|+|+ +++++++.|..||+||.|+||||+++|+.|++.+    +||+++|+|||||+|
T Consensus       171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i  245 (468)
T 1vlu_A          171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY  245 (468)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred             HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence            99995    8    999999999999 6767899999999999999999999999999775    599999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc---cCCC
Q 018922          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPF  336 (349)
Q Consensus       278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~---g~p~  336 (349)
                      |++|||+|.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++   |||.
T Consensus       246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~  305 (468)
T 1vlu_A          246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKD  305 (468)
T ss_dssp             ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHH
T ss_pred             ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHH
Confidence            99999999999999999999999 99999999999999 9999999999999998   8874

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=7.5e-55  Score=421.03  Aligned_cols=265  Identities=18%  Similarity=0.200  Sum_probs=238.8

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhh-------hCcHHHH
Q 018922           58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPGA  126 (349)
Q Consensus        58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-------~~ev~~~  126 (349)
                      .+++++++++|++||+  .|+.+|..+|.++|+++++.|++++++|++++++|+||+.    .++.       ..|+..+
T Consensus        13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~   90 (427)
T 1o20_A           13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM   90 (427)
T ss_dssp             -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence            4689999999999999  8999999999999999999999999999999999999986    4443       1489999


Q ss_pred             HHHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHH
Q 018922          127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL  203 (349)
Q Consensus       127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~  203 (349)
                      ++.+++++++.+. .+...+.   ..+...+++++|+|||++|+|||  +...++++++||++||+||+|||+.+|+++.
T Consensus        91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~  167 (427)
T 1o20_A           91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK  167 (427)
T ss_dssp             HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred             HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence            9999999987665 3443332   12334578899999999999876  4788999999999999999999999999999


Q ss_pred             HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE
Q 018922          204 YFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI  278 (349)
Q Consensus       204 ~l~~~l~----~aglP~gvv~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV  278 (349)
                      .|++++.    ++|+|+|++|+|+|. ++++++.|..||+|+.|+||||+.+|+.|++.+    +||+++|+|||||+||
T Consensus       168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV  243 (427)
T 1o20_A          168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV  243 (427)
T ss_dssp             HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred             HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence            9999997    789999999999984 466788899999999999999999999999886    4899999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922          279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV  332 (349)
Q Consensus       279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~  332 (349)
                      ++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.++++++++
T Consensus       244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~  296 (427)
T 1o20_A          244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV  296 (427)
T ss_dssp             CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999999 9999999999999999999999999998876

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=93.10  E-value=5.7  Score=37.13  Aligned_cols=239  Identities=17%  Similarity=0.168  Sum_probs=124.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCc------hhhhh--------------hCcHHHHHHHHHHHHH
Q 018922           77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-GKL------HSWAK--------------MGDIPGAANTLRYYAG  135 (349)
Q Consensus        77 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-Gk~------~~~a~--------------~~ev~~~~~~l~~~~~  135 (349)
                      |+.....+-.+..+.+.+.++++.|+-....++.. |..      +....              ...++.+.+.++.|.+
T Consensus        27 r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh~  106 (423)
T 4gic_A           27 WSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYAE  106 (423)
T ss_dssp             CC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence            55555555556666666666666665555444433 211      11000              0123334444554443


Q ss_pred             hhhhhcCceeeccCCccceEEeecceeEEEEcCCC---ccHHhhHHHHHhHHhcCCe-EEE-ecCCCChHHHHHHHHHHH
Q 018922          136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHLAK  210 (349)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~-vvl-kps~~~~~t~~~l~~~l~  210 (349)
                      .... .........+.....++.|+--|++..|.-   ||...+ ..++||-.+|.. +|+ -|++..-. .-.+.-+..
T Consensus       107 ~Q~~-~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G~i-~p~iL~AA~  183 (423)
T 4gic_A          107 RQKL-DSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRGEL-NALVLAAAY  183 (423)
T ss_dssp             HHCC-CCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGGCC-CHHHHHHHH
T ss_pred             hccc-CCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCCCc-cHHHHHHHH
Confidence            2211 111112223455567789999999999964   665444 457899999986 343 34332111 122233345


Q ss_pred             HcCCCCCcEEEEeCCchhHHHHHHc----CCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc-CCCCHH
Q 018922          211 LAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF-DDVDVN  285 (349)
Q Consensus       211 ~aglP~gvv~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~-~dad~~  285 (349)
                      .+|+-+    +..-.|...-.+|.-    -|.||.|+-.|..=+..+=  +... +..-+=+.-|..--+||- +++|.+
T Consensus       184 l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK--r~v~-g~VgIDm~AGPSEilViAD~~a~p~  256 (423)
T 4gic_A          184 ISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAK--KLVF-GQVGIDMVAGPSEILVISDGRTDPD  256 (423)
T ss_dssp             HHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH--HHHB-TTBEECCCCCCCEEEEEECSCSCHH
T ss_pred             hcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHH--HHhc-CCcCcccccccceEEEEeCCCCCHH
Confidence            566543    222224444445553    5899999999997665432  2222 212222222333333433 348999


Q ss_pred             HHHHHHHHHHhhhcCCCcccCceEEEecc--cHHHHHHHHHHHhhcc
Q 018922          286 TAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW  330 (349)
Q Consensus       286 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--~~~~f~~~l~~~~~~l  330 (349)
                      ..+..++.-+=+...     .+.++|..+  +.+++.+.+.+.++.+
T Consensus       257 ~vAaDLlsQAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l  298 (423)
T 4gic_A          257 WIAMDLFSQAEHDED-----AQAILISPDAAHLEAVQASIERLLPGM  298 (423)
T ss_dssp             HHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHhhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence            998888776644432     456677555  5666766776666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	349
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-121
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-118
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-87
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	1e-86
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-69
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	9e-57
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	2e-53
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-48
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-32
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	9e-30
d1vlua_	436	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	3e-11

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  356 bits (914), Expect = e-121
 Identities = 179/331 (54%), Positives = 234/331 (70%), Gaps = 1/331 (0%)

Query: 17  PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP 76
            + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G 
Sbjct: 9   LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGS 68

Query: 77  -WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135
            W     +ER  ++ K ADLIE    +LA +EA++ GKL S A + D+ G   TLRY AG
Sbjct: 69  PWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAG 128

Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
            ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPA
Sbjct: 129 WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 188

Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
           EQTPL AL+   L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + 
Sbjct: 189 EQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248

Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
           +AA  SNLK VSLELGGKSP ++F D D++ A + A  G+ +++G+ C+A+SR++V+E I
Sbjct: 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 308

Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           YDEF ++ VE+AK +V+G+P  P V QGPQ+
Sbjct: 309 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQI 339

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  347 bits (892), Expect = e-118
 Identities = 178/333 (53%), Positives = 227/333 (68%), Gaps = 1/333 (0%)

Query: 15  KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
           + PE+   ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF  
Sbjct: 7   QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66

Query: 75  GP-WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYY 133
           G  W R   + R  ++ + ADLIE     LA LE LD GK +  + + D+      LRYY
Sbjct: 67  GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126

Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
           AG ADK HG+ + +      YT  EP+GV G IIPWNFP  M   K+ PALA G  +++K
Sbjct: 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186

Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
            AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR 
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246

Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
           +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+   A SR +VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 306

Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            IYDEF ++ V +AK+ VVG+PFD    QGPQV
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 339

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  269 bits (689), Expect = 3e-87
 Identities = 119/323 (36%), Positives = 184/323 (56%), Gaps = 6/323 (1%)

Query: 25  FINGEFVDSVSGKTFE-TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
           +  G  + S  G T E   +P TG  + ++     E+VD AV++A+ A+    W + +G 
Sbjct: 23  YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGI 80

Query: 84  ERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
           ER  +ML+ A +I E  + +A LE ++ GK  +     DI  A   + YYAG A  + G+
Sbjct: 81  ERSRVMLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQ 139

Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
            +++      YT REP+GV   I+ WN+P  +   K +PALA G  ++ KP+  TP+  +
Sbjct: 140 HIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199

Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
             A +   AGVP G++NVV G G   G+ +  H ++ KVSFTGS   G++VM+ +A   +
Sbjct: 200 ILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTV 257

Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
           K V+LELGGKSPLLIF D ++  A   AL+     +G++C   +RV+VQ  I  +F +++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317

Query: 324 VEKAKAWVVGDPFDPAVRQGPQV 346
           V++ KA VVGDP     R G  +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLI 340

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  267 bits (682), Expect = 1e-86
 Identities = 117/329 (35%), Positives = 165/329 (50%), Gaps = 6/329 (1%)

Query: 22  TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
            KL INGE V    G+     +P TG+ +  IAE   E VD AV+AA  AF    W + +
Sbjct: 3   HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTT 59

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGK-LHSWAKMGDIPGAANTLRYYAGAADKI 140
              R   +LK AD+IEE+ +V A LE+ + GK LHS               +   A    
Sbjct: 60  PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119

Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
                +          R+P+GVV  I PWN+P  M   K++PALAAG  +++KP+E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179

Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
            AL  A LAK    P GV+N++ G G T G  +  H  +  VS TGS   G  ++     
Sbjct: 180 TALKLAELAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237

Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
           S++K   +ELGGK+P+++FDD D+    +       +N G+ C A+ R+Y Q+GIYD   
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297

Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVLIC 349
           +KL         G P D +   GP   + 
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLA 326

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  222 bits (566), Expect = 2e-69
 Identities = 91/332 (27%), Positives = 147/332 (44%), Gaps = 12/332 (3%)

Query: 23  KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
           K ++NGE+  S      +  +P +G  +  +     E+VD    +A++A     W   S 
Sbjct: 5   KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQ--PAWRALSY 60

Query: 83  AERRGIMLKFADLIEEHAEVLAVLEALDAGK-----LHSWAKMGDIPGAANTLRYYAGAA 137
            ER   + K AD++    E +  + + +  K     +    +  +I   A          
Sbjct: 61  IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120

Query: 138 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
               G     S+       REP+G+V  I P+N+P  +   K++PAL AG  +  KP  Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180

Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
             +  L  A     AG+P GV N + G G   G  I  H  ++ ++FTGST +G ++ + 
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240

Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
           A    ++P+ LELGGK   ++ +D D+   A   + G     G+ C A  RV V E + D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297

Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC 349
           E  +K+ EK  A  +G+P D A          
Sbjct: 298 ELVEKIREKVLALTIGNPEDDADITPLIDTKS 329

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  190 bits (482), Expect = 9e-57
 Identities = 95/345 (27%), Positives = 161/345 (46%), Gaps = 14/345 (4%)

Query: 11  KSLFKM-PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAAR 69
           + + K    +     ++ GE+  S  G+  E   P     IA++    +E+V+  +    
Sbjct: 5   EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 62

Query: 70  QAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANT 129
           +           G ER  ++ K AD+IE + +V A +  ++AGK  S A +G++  A + 
Sbjct: 63  KRGRWS-ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDR 120

Query: 130 LRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184
           LR       KI G+ +       +   +G   REP+GVV  I P+N+P      K++ + 
Sbjct: 121 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 180

Query: 185 AAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 244
             G  ++VKP+   PL A         AG P   + ++   G  A   +A    +  VSF
Sbjct: 181 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVA-DDRVAAVSF 239

Query: 245 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICV 304
           TGST+VG +V++      +K   +ELGG  P ++ +D D++ AAD    GI    G+ C 
Sbjct: 240 TGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 296

Query: 305 ASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLIC 349
           A   V  +  +Y +  +++ ++  +  VGDP DP V  GP +   
Sbjct: 297 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPS 341

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  182 bits (461), Expect = 2e-53
 Identities = 91/332 (27%), Positives = 160/332 (48%), Gaps = 14/332 (4%)

Query: 23  KLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
            L+I GE+VD+   +   +++P    E +   A+  K + + A++AA +AF    W  + 
Sbjct: 39  PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKT--WKDWP 94

Query: 82  GAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD--K 139
             +R  ++LK A L+      L      + GK        D+  A + + YYA AA   +
Sbjct: 95  QEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALRYR 153

Query: 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
                +         +   P+G    I PWNFP  +F   +   +A G T+I KPAE   
Sbjct: 154 YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAV 213

Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
           ++      +   AG P GV+N +PG G   GA +  H  I  ++FTGS +VG ++ +AA 
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273

Query: 260 -----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
                 +  K   +E GGK+ +++ +  D + AA+  ++     +G+ C A+SR+ + +G
Sbjct: 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333

Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            Y+   ++++++A+   VG P +     GP V
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVV 364

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  166 bits (421), Expect = 2e-48
 Identities = 78/290 (26%), Positives = 120/290 (41%), Gaps = 11/290 (3%)

Query: 61  VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKM 120
           +   VK AR+AF+       S   R   +     +I E+ + ++   A D GK    +  
Sbjct: 2   ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59

Query: 121 GDIPGAANTLRYYAGAADKI-HGEVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMF 176
            ++      L             E +  +R  Q    Y   EP+GVV  I  WN+P  + 
Sbjct: 60  EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119

Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH 236
              +  A+AAG  +I+KP+E +  +A   A L             +   G          
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP---QYMDQNLYLVVKGGVPETTELLK 176

Query: 237 MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL 296
              D + +TGST VG+ VM AAA  +L PV+LELGGKSP  +  D D++ A      G  
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235

Query: 297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
            N G+ CVA   +     I ++  +KL +  K    G+    +   G  +
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRII 284

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score =  123 bits (309), Expect = 4e-32
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 15/185 (8%)

Query: 35  SGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFA 93
           +   F   +  TGEA+        + +V+ A  AA +      + R + ++R  ++   A
Sbjct: 1   TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58

Query: 94  DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM------ 147
             +E  ++ +     L+          G+I   AN LR +A   +        +      
Sbjct: 59  SELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117

Query: 148 ---SRALQGYTLREPIGVVGHIIPWNFPT--TMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
                       +  +G V      NFP   +      + ALAAGC +IVK     P  +
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177

Query: 203 LYFAH 207
              A 
Sbjct: 178 QIVAE 182

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  115 bits (289), Expect = 9e-30
 Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 15/303 (4%)

Query: 59  EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWA 118
           +++    K  R+A+D       +  E+   + K A+ ++E  + +     +D  K     
Sbjct: 1   DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58

Query: 119 K-----------MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 167
                          I           G  D +   +    R       R  + +    I
Sbjct: 59  VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118

Query: 168 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF-G 226
            +     +       AL +G T++++                + A     +      F  
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178

Query: 227 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNT 286
            T  + +   + + +         G  ++     +   PV     G   + + +  D+  
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238

Query: 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQV 346
           A  + +       G    A   +  ++ I  EF   +VE+ +   V        R+    
Sbjct: 239 AVPVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297

Query: 347 LIC 349
           ++ 
Sbjct: 298 VVP 300

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.8 bits (149), Expect = 3e-11
 Identities = 35/286 (12%), Positives = 83/286 (29%), Gaps = 26/286 (9%)

Query: 65  VKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALD---AGKLHSWAKMG 121
            K AR+A +       S   R  I+ K  D ++ +A  +     +D   A +      + 
Sbjct: 9   AKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLL 66

Query: 122 D---------IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLRE-PIGVVGHIIPWNF 171
                            ++  A   D + G+V        G TL +    V   ++ +  
Sbjct: 67  KRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVIFES 125

Query: 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK------LAGVPDGVLNVVPGF 225
              +     + ++ +G   I+K  +++       A +         +     V +V    
Sbjct: 126 RPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE 185

Query: 226 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVN 285
                + +    +   +           +++    +   PV     G   + + +D D+ 
Sbjct: 186 TRQDVSDLLDQDEYIDLVVPRG---SNALVRKIKDTTKIPVLGHADGICSIYLDEDADLI 242

Query: 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
            A  ++L              + +         +E       +  V
Sbjct: 243 KAKRISLDAKTNYPAGCNAMETLLIN-PKFSKWWEVLENLTLEGGV 287

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	349
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=3e-76  Score=579.57  Aligned_cols=336  Identities=54%  Similarity=0.895  Sum_probs=319.2

Q ss_pred             cccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHH
Q 018922           13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLK   91 (349)
Q Consensus        13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~   91 (349)
                      -+++..++..++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++||+.+ .|++++.++|.++|++
T Consensus         5 ~~~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~k   84 (494)
T d1bxsa_           5 PLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNK   84 (494)
T ss_dssp             CCSSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHH
T ss_pred             CCCCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHH
Confidence            456777777799999999998888999999999999999999999999999999999999631 4999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCc
Q 018922           92 FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNF  171 (349)
Q Consensus        92 ~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~  171 (349)
                      +++.|++++++|++++++|+|||+.++...|+..+++.+++++...++..+...+.......++.++|+|||++|+||||
T Consensus        85 ia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~  164 (494)
T d1bxsa_          85 LADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNF  164 (494)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSS
T ss_pred             HHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccc
Confidence            99999999999999999999999998765789999999999999998888777776667778899999999999999999


Q ss_pred             cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHH
Q 018922          172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG  251 (349)
Q Consensus       172 P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g  251 (349)
                      |+...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|++||+|+.|.||||+.+|
T Consensus       165 P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g  244 (494)
T d1bxsa_         165 PLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG  244 (494)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred             hhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       252 ~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      +.|++.++..++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++++++
T Consensus       245 ~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~  324 (494)
T d1bxsa_         245 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV  324 (494)
T ss_dssp             HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhee
Confidence            99999988657999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccCCC
Q 018922          332 VGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       332 ~g~p~~~~~~~Gpl~~~  348 (349)
                      +|+|+++++++|||+++
T Consensus       325 ~g~~~~~~~~~gpli~~  341 (494)
T d1bxsa_         325 LGNPLTPGVSQGPQIDK  341 (494)
T ss_dssp             BSCTTSTTCCBCCCSCH
T ss_pred             eeccCCCCCcCCCcCCH
Confidence            99999999999999974

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=2.1e-75  Score=573.33  Aligned_cols=334  Identities=53%  Similarity=0.843  Sum_probs=317.4

Q ss_pred             cCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhccc-CCCCCCCHHHHHHHHHHHH
Q 018922           15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH-GPWPRFSGAERRGIMLKFA   93 (349)
Q Consensus        15 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~-~~w~~~~~~~R~~~L~~~a   93 (349)
                      +++++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+. ..|++++..+|.++|++++
T Consensus         7 ~~p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a   86 (494)
T d1o04a_           7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLA   86 (494)
T ss_dssp             SSCCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred             CCCccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence            456677789999999999888899999999999999999999999999999999999862 1499999999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccH
Q 018922           94 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT  173 (349)
Q Consensus        94 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~  173 (349)
                      +.|++++++|++++++|+|||..++...|+..+++.++|++.......++..+...+...+++++|+|||++|+|||||+
T Consensus        87 ~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~  166 (494)
T d1o04a_          87 DLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPL  166 (494)
T ss_dssp             HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHH
T ss_pred             HHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHH
Confidence            99999999999999999999999987679999999999999999888877777666677889999999999999999999


Q ss_pred             HhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922          174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ  253 (349)
Q Consensus       174 ~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~  253 (349)
                      ...++++++||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+++|+.
T Consensus       167 ~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~  246 (494)
T d1o04a_         167 LMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV  246 (494)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922          254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG  333 (349)
Q Consensus       254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g  333 (349)
                      |++.++.+++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++.+++|
T Consensus       247 i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g  326 (494)
T d1o04a_         247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG  326 (494)
T ss_dssp             HHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBC
T ss_pred             HHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeec
Confidence            99888755899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCC
Q 018922          334 DPFDPAVRQGPQVLI  348 (349)
Q Consensus       334 ~p~~~~~~~Gpl~~~  348 (349)
                      +|+++++++|||+++
T Consensus       327 ~p~~~~~~~gpli~~  341 (494)
T d1o04a_         327 NPFDSKTEQGPQVDE  341 (494)
T ss_dssp             CTTSTTCSBCCCSSH
T ss_pred             CcccccCccCCCCCH
Confidence            999999999999985

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=2.4e-73  Score=559.21  Aligned_cols=325  Identities=37%  Similarity=0.637  Sum_probs=309.4

Q ss_pred             ccccceeecCeeeeCCCCCeE-EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922           19 IKFTKLFINGEFVDSVSGKTF-ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE   97 (349)
Q Consensus        19 ~~~~~~~i~g~~~~~~~~~~~-~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~   97 (349)
                      +....+||||+|+.+.++.++ +++||+||+++++++.++.+|+++|+++|++||+  .|++++..+|.++|+++++.|+
T Consensus        17 ~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a~~L~   94 (503)
T d1a4sa_          17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIR   94 (503)
T ss_dssp             CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence            344568999999988766655 7999999999999999999999999999999999  8999999999999999999999


Q ss_pred             HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922           98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF  177 (349)
Q Consensus        98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~  177 (349)
                      +++++|++++++|+|||+.++. .|+..+++.++|++.......+...+.+.+...++.++|+|||++|+|||||+...+
T Consensus        95 ~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~  173 (503)
T d1a4sa_          95 ERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAA  173 (503)
T ss_dssp             HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred             HhHHHHHHHHHHhhhhcchhhh-hhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChHHHHH
Confidence            9999999999999999999998 699999999999999988877766665666678899999999999999999999999


Q ss_pred             HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922          178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA  257 (349)
Q Consensus       178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~  257 (349)
                      +++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|++||+|+.|.||||+++|+.|.+.
T Consensus       174 ~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~  252 (503)
T d1a4sa_         174 WKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM  252 (503)
T ss_dssp             HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 67899999999999999999999999999999


Q ss_pred             HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922          258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD  337 (349)
Q Consensus       258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~  337 (349)
                      ++. ++||+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++++|+++|.++++++++|+|++
T Consensus       253 aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~  331 (503)
T d1a4sa_         253 SAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL  331 (503)
T ss_dssp             HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred             hhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccc
Confidence            987 8999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCC
Q 018922          338 PAVRQGPQVLI  348 (349)
Q Consensus       338 ~~~~~Gpl~~~  348 (349)
                      +.+++||++++
T Consensus       332 ~~~~~gp~i~~  342 (503)
T d1a4sa_         332 TETRMGGLISK  342 (503)
T ss_dssp             TTCCBCCCSCH
T ss_pred             cccccccccCH
Confidence            99999999974

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-72  Score=550.02  Aligned_cols=323  Identities=38%  Similarity=0.616  Sum_probs=299.3

Q ss_pred             ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922           21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA  100 (349)
Q Consensus        21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~  100 (349)
                      +.++||||+|+.+ ++++++++||+||++|++++.++.+|+++|+++|++||+  .|++++..+|.++|+++++.|++++
T Consensus         2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~   78 (474)
T d1wnda_           2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG   78 (474)
T ss_dssp             CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred             CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence            4689999999976 567899999999999999999999999999999999999  8999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922          101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK  179 (349)
Q Consensus       101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~  179 (349)
                      ++|++++++|+|||+.++...++..+...+++++...........+ ...+...+++++|+|||++|+|||||+...+++
T Consensus        79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~  158 (474)
T d1wnda_          79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK  158 (474)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred             HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence            9999999999999999987566777777777776655444333222 224566788999999999999999999999999


Q ss_pred             HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      +++||++||+||+|||+.+|+++..+++++++ ++|+|++|+|+|+++++++.|++||+|+.|.||||+++|+.|.+.++
T Consensus       159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~  237 (474)
T d1wnda_         159 LAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA  237 (474)
T ss_dssp             HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred             HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence            99999999999999999999999999998876 59999999999988899999999999999999999999999999998


Q ss_pred             hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922          260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA  339 (349)
Q Consensus       260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~  339 (349)
                      . ++||+++|+|||||+||++|||++.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++
T Consensus       238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~  316 (474)
T d1wnda_         238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES  316 (474)
T ss_dssp             G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred             c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence            8 899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCC
Q 018922          340 VRQGPQVLI  348 (349)
Q Consensus       340 ~~~Gpl~~~  348 (349)
                      +++|||+++
T Consensus       317 ~~~Gpli~~  325 (474)
T d1wnda_         317 TELGPLSSL  325 (474)
T ss_dssp             CCBCCCSCH
T ss_pred             ceecccccc
Confidence            999999974

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-70  Score=540.11  Aligned_cols=323  Identities=28%  Similarity=0.497  Sum_probs=300.9

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE   98 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~   98 (349)
                      +.+++||||+|+.+  .+.+.++||. ||+++++++.++.+|+++|+++|++||+  .|+++|.++|.++|+++++.|++
T Consensus        36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~  111 (516)
T d1uzba_          36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRR  111 (516)
T ss_dssp             EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence            45689999999975  4578899985 7999999999999999999999999999  89999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec--cCCccceEEeecceeEEEEcCCCccHHhh
Q 018922           99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMF  176 (349)
Q Consensus        99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~  176 (349)
                      ++++|++++++|+|||+.++. .|+..+++.+++++.......+.....  ......+++++|+|||++|+|||||+...
T Consensus       112 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~  190 (516)
T d1uzba_         112 RKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF  190 (516)
T ss_dssp             THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHH
T ss_pred             HHHHHHHHHHHHhCCCccccc-hhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccc
Confidence            999999999999999999987 699999999999999887766543322  23455678899999999999999999999


Q ss_pred             HHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 018922          177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ  256 (349)
Q Consensus       177 ~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~  256 (349)
                      ++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+.+|+.|++
T Consensus       191 ~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~  270 (516)
T d1uzba_         191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYE  270 (516)
T ss_dssp             HHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred             cccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHhh-----CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922          257 AAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV  331 (349)
Q Consensus       257 ~~a~-----~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~  331 (349)
                      .++.     .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++++|++++.+++++++
T Consensus       271 ~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~  350 (516)
T d1uzba_         271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS  350 (516)
T ss_dssp             HHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred             HHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcc
Confidence            8872     36899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccCCC
Q 018922          332 VGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       332 ~g~p~~~~~~~Gpl~~~  348 (349)
                      +| |.++++++|||+++
T Consensus       351 ~g-~~~~~~~~gpli~~  366 (516)
T d1uzba_         351 VG-PAEENPDLGPVVSA  366 (516)
T ss_dssp             BS-CGGGCCSBCCCSCH
T ss_pred             cC-CCcccCccccccCH
Confidence            99 66888999999974

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=4.1e-67  Score=515.22  Aligned_cols=325  Identities=29%  Similarity=0.443  Sum_probs=301.2

Q ss_pred             CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922           16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL   95 (349)
Q Consensus        16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~   95 (349)
                      +..++.+++||||+|+.  ++++++++||+||+++++++.++.+|+++|+++|+++++. .|+++|.++|+++|+++++.
T Consensus        11 ~~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~~   87 (499)
T d1ky8a_          11 KGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADI   87 (499)
T ss_dssp             ETTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHHH
Confidence            44567789999999986  4678999999999999999999999999999999877662 59999999999999999999


Q ss_pred             HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-----CCccceEEeecceeEEEEcCCC
Q 018922           96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVVGHIIPWN  170 (349)
Q Consensus        96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n  170 (349)
                      |++++++|++++++|+|||..+++ .|+..+++.++|++...++..+......     .....+++|+|+|||++|+|||
T Consensus        88 l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N  166 (499)
T d1ky8a_          88 IERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFN  166 (499)
T ss_dssp             HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSS
T ss_pred             HHHhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeecccccccccccc
Confidence            999999999999999999999998 6999999999999998887766543322     2345678999999999999999


Q ss_pred             ccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHH
Q 018922          171 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV  250 (349)
Q Consensus       171 ~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~  250 (349)
                      ||+...++++++||++||+||+|||+.+|.++..+++++.++|+|.++++++.+++ +....|+.||.++.+.||||+..
T Consensus       167 ~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~  245 (499)
T d1ky8a_         167 YPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEV  245 (499)
T ss_dssp             SHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHH
T ss_pred             ccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeeccccc
Confidence            99999999999999999999999999999999999999999999999999999865 46788999999999999999999


Q ss_pred             HHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcc
Q 018922          251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW  330 (349)
Q Consensus       251 g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l  330 (349)
                      ++.+.+.++   .+|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|||||++++|+|+++|.++++++
T Consensus       246 g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l  322 (499)
T d1ky8a_         246 GERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSL  322 (499)
T ss_dssp             HHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTC
T ss_pred             ceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhC
Confidence            999998763   58999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCcccccCCC
Q 018922          331 VVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       331 ~~g~p~~~~~~~Gpl~~~  348 (349)
                      ++|+|+|+++++|||+++
T Consensus       323 ~~G~p~~~~~~~gpli~~  340 (499)
T d1ky8a_         323 RVGDPRDPTVDVGPLISP  340 (499)
T ss_dssp             CBSCTTSTTCSBCCCSCH
T ss_pred             ccCCCCCccccccccchH
Confidence            999999999999999974

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=3.9e-64  Score=491.69  Aligned_cols=319  Identities=31%  Similarity=0.501  Sum_probs=294.7

Q ss_pred             cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922           20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH   99 (349)
Q Consensus        20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~   99 (349)
                      +.+++||||+|+.+  +.+++++||+||+++++++.++.+|+++|+++|++|++  .|+++|.++|.++|+++++.|.++
T Consensus         2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~   77 (474)
T d1euha_           2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD   77 (474)
T ss_dssp             CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred             ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence            56799999999864  46899999999999999999999999999999999999  899999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee------ccCCccceEEeecceeEEEEcCCCccH
Q 018922          100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPT  173 (349)
Q Consensus       100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~GVv~~i~p~n~P~  173 (349)
                      +++|++++++|+|||..++. .|+...+..++++.............      ...+...+++++|+|||++|+|||||+
T Consensus        78 ~~~la~~~~~e~Gk~~~~a~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~  156 (474)
T d1euha_          78 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV  156 (474)
T ss_dssp             HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred             HHHHHHHHHHHhCCCcchhc-cccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence            99999999999999999988 69999999999988776554332221      112344578899999999999999999


Q ss_pred             HhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922          174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ  253 (349)
Q Consensus       174 ~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~  253 (349)
                      ...+..+++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+++|++.++++.|+.||+|+.|.||||+.+++.
T Consensus       157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~  236 (474)
T d1euha_         157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER  236 (474)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred             hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence            99999999999999999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922          254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG  333 (349)
Q Consensus       254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g  333 (349)
                      +.+.++   .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.+.++...++.|
T Consensus       237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~  313 (474)
T d1euha_         237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG  313 (474)
T ss_dssp             HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred             hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence            998864   58999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCC
Q 018922          334 DPFDPAVRQGPQVL  347 (349)
Q Consensus       334 ~p~~~~~~~Gpl~~  347 (349)
                      +|.+.. +++|++.
T Consensus       314 ~~~~~~-~~~~~~~  326 (474)
T d1euha_         314 NPEDDA-DITPLID  326 (474)
T ss_dssp             CGGGTC-SBCCCSC
T ss_pred             Cccccc-ccccccc
Confidence            998764 4677664

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=4.1e-61  Score=472.13  Aligned_cols=302  Identities=23%  Similarity=0.310  Sum_probs=264.7

Q ss_pred             CCeEEeecCCCCceeE-EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc
Q 018922           36 GKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKL  114 (349)
Q Consensus        36 ~~~~~~~~P~~g~~i~-~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~  114 (349)
                      +++|.++||+|||.|+ .++.++.+|+++|+++|++||+  .|++++.++|.++|+++++.|++|+++|++++++|+|||
T Consensus         2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp   79 (504)
T d1ez0a_           2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP   79 (504)
T ss_dssp             CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred             CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999997 7999999999999999999999  899999999999999999999999999999999999999


Q ss_pred             hhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec---------cCCccceEEeecceeEEEEcCCCccHHhh--HHHHHhH
Q 018922          115 HSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM---------SRALQGYTLREPIGVVGHIIPWNFPTTMF--FMKVSPA  183 (349)
Q Consensus       115 ~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~~~A  183 (349)
                      +.+++ .|+..+++.++||++..++........         ......+..++|+|||++|+|||||+...  .+++++|
T Consensus        80 ~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~A  158 (504)
T d1ez0a_          80 EVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA  158 (504)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHH
Confidence            99998 699999999999998877654432211         11234567788999999999999998654  4689999


Q ss_pred             HhcCCeEEEecCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922          184 LAAGCTMIVKPAEQTPLIALYFA----HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA  259 (349)
Q Consensus       184 L~aGN~vvlkps~~~~~t~~~l~----~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a  259 (349)
                      |++||+||+|||+.+|.++..+.    ++|.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|.+.++
T Consensus       159 LaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa  238 (504)
T d1ez0a_         159 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH  238 (504)
T ss_dssp             HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred             HHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhh
Confidence            99999999999999999987765    55668899999999999988899999999999999999999999999999998


Q ss_pred             hCCCcce--EEeCCCCCceeEcCCCCHHHHH--HHHHHHHhhhcCCCcccCceEEEecccH-HHHHHHHHHHhhcccccC
Q 018922          260 TSNLKPV--SLELGGKSPLLIFDDVDVNTAA--DMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKAWVVGD  334 (349)
Q Consensus       260 ~~~~~~~--~le~gG~~~~iV~~dad~~~a~--~~i~~~~~~~~GQ~C~a~~~v~V~~~~~-~~f~~~l~~~~~~l~~g~  334 (349)
                      . +++|+  ++|+|||||+||++|||+++|+  +.++.++|.|+||.|++++|+||+++.+ +.|++.+.+.++.   + 
T Consensus       239 ~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~-  313 (504)
T d1ez0a_         239 E-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q-  313 (504)
T ss_dssp             H-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C-
T ss_pred             c-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c-
Confidence            8 77765  5599999999999999999874  5789999999999999999999888754 4577777665543   3 


Q ss_pred             CCCCCCcccccCC
Q 018922          335 PFDPAVRQGPQVL  347 (349)
Q Consensus       335 p~~~~~~~Gpl~~  347 (349)
                        ++++.+||+++
T Consensus       314 --~~~~~~gp~i~  324 (504)
T d1ez0a_         314 --SPSTLLTPGIR  324 (504)
T ss_dssp             --CCBCCSSHHHH
T ss_pred             --ccccccccchh
Confidence              34688999875

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-57  Score=439.52  Aligned_cols=281  Identities=28%  Similarity=0.349  Sum_probs=255.7

Q ss_pred             HHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhh
Q 018922           61 VDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI  140 (349)
Q Consensus        61 v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~  140 (349)
                      +++|+++|++||+  .|+.+|.++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.++++++....+
T Consensus         2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~   79 (446)
T d1ad3a_           2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW   79 (446)
T ss_dssp             HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6899999999999  89999999999999999999999999999999999999999987679999999999998877654


Q ss_pred             cCceee----ccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCC
Q 018922          141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD  216 (349)
Q Consensus       141 ~~~~~~----~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~  216 (349)
                      ......    .......++.|+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+ ++|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~  158 (446)
T d1ad3a_          80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQ  158 (446)
T ss_dssp             HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCT
T ss_pred             hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cccc
Confidence            433211    11234457889999999999999999999999999999999999999999999999999998876 5999


Q ss_pred             CcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHh
Q 018922          217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL  296 (349)
Q Consensus       217 gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~  296 (349)
                      ++++++.+.+... ..+ .++.++.|+||||+.+|+.|.+.++. ++||+++|+|||||+||++|||+|.|++.++.++|
T Consensus       159 ~~~~~~~~~~~~~-~~~-~~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~  235 (446)
T d1ad3a_         159 NLYLVVKGGVPET-TEL-LKERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF  235 (446)
T ss_dssp             TTEEECCCSHHHH-HHH-TTSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred             cccccccccchhh-hhh-cccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence            9999999855443 444 46789999999999999999999987 89999999999999999999999999999999999


Q ss_pred             hhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922          297 FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI  348 (349)
Q Consensus       297 ~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~  348 (349)
                      .|+||.|++++|||||++++++|+++|.++++.+ +|+|.++++++||++++
T Consensus       236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~  286 (446)
T d1ad3a_         236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIIND  286 (446)
T ss_dssp             TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCH
T ss_pred             cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhh
Confidence            9999999999999999999999999999999887 79999999999999974

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-46  Score=359.84  Aligned_cols=272  Identities=14%  Similarity=0.109  Sum_probs=227.2

Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCc------------HHHH
Q 018922           59 EDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD------------IPGA  126 (349)
Q Consensus        59 ~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e------------v~~~  126 (349)
                      +|+++++++|++||+  .|+++|..+|.++|++++++|++|+++|++++++|+||+..++. .|            ++.+
T Consensus         1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~-~e~~~~rl~~~~~~i~~~   77 (414)
T d1o20a_           1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV-KESLVDRLALNDKRIDEM   77 (414)
T ss_dssp             CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTC-CHHHHHHHCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccc-cHHHHHHHhccHHHHHHH
Confidence            478999999999999  89999999999999999999999999999999999999988765 34            6667


Q ss_pred             HHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHH
Q 018922          127 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA  206 (349)
Q Consensus       127 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~  206 (349)
                      ++.+++++.......+...+........+.+.|+||++++.|||||+...++++++||++||+||+|||+.+|.++..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~  157 (414)
T d1o20a_          78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV  157 (414)
T ss_dssp             HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred             HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence            88888888776665555554444455677889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCC-ceeEcCC
Q 018922          207 HLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS-PLLIFDD  281 (349)
Q Consensus       207 ~~l~~a----glP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~-~~iV~~d  281 (349)
                      +++.++    |+|.++++.+.+.+......+..++   .+.|+||+..+..+.+.++. +.+++++|+||+| ++||++|
T Consensus       158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d  233 (414)
T d1o20a_         158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRLR---EYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES  233 (414)
T ss_dssp             HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCT---TTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred             hHHHhhhhhccccccccccccccchhhhhhccccc---ccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence            998776    4555557777765555555565543   44445555556666666666 5678888888765 5788899


Q ss_pred             CCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922          282 VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP  338 (349)
Q Consensus       282 ad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~  338 (349)
                      ||++.|++.++.++|.| ||.|++++|+|||+++||+|+++|.+...+..++++.++
T Consensus       234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~  289 (414)
T d1o20a_         234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE  289 (414)
T ss_dssp             SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH
T ss_pred             cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch
Confidence            99999999999999877 999999999999999999999999999998887776543

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-37  Score=296.55  Aligned_cols=257  Identities=18%  Similarity=0.193  Sum_probs=201.0

Q ss_pred             HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHhCCchhhh-h-----hCcHHHHH
Q 018922           60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLE------ALDAGKLHSWA-K-----MGDIPGAA  127 (349)
Q Consensus        60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~a-~-----~~ev~~~~  127 (349)
                      ++++.++.|++|++  .|+.++.++|.++|+++++.|++|+++|++..      +++.|++-... +     ...+...+
T Consensus         4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~   81 (436)
T d1vlua_           4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML   81 (436)
T ss_dssp             HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence            56788999999999  89999999999999999999999999998854      44555543211 0     01244555


Q ss_pred             HHHHHHHHhhhhhcCcee--eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHH
Q 018922          128 NTLRYYAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF  205 (349)
Q Consensus       128 ~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l  205 (349)
                      +.++..+...+.+.....  ..+.+...+..+.|+||+++| |+++| ..++....+||++||+||+||++.++.++..+
T Consensus        82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l  159 (436)
T d1vlua_          82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM  159 (436)
T ss_dssp             HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred             HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence            666655544332211111  122345567778999999998 66777 66778889999999999999999999999888


Q ss_pred             HHHH--------HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922          206 AHLA--------KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL  277 (349)
Q Consensus       206 ~~~l--------~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i  277 (349)
                      .+++        .++|+|+++++++++ ..++++.|..|++|++|+||||...++.+.+.+    .+|++.++||++|+|
T Consensus       160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~----~~pvi~~~~G~~~~~  234 (436)
T d1vlua_         160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY  234 (436)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred             HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeeccc----cceEEEecCCcccee
Confidence            7665        477999999999998 457788999999999999999999888876553    359999999999999


Q ss_pred             EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHH
Q 018922          278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK  326 (349)
Q Consensus       278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~  326 (349)
                      |++|||+|+|++.++.++|.++|| |++.++++||+++++.|...+...
T Consensus       235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~  282 (436)
T d1vlua_         235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLT  282 (436)
T ss_dssp             ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHH
T ss_pred             ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHH
Confidence            999999999999999999999996 889999999999998886555433