Citrus Sinensis ID: 018939

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MDSCCAAALKANAHPAVSNRNTGFWGGSVKGSLKSWDLNFGSRVWKNLRTEKINKNVTKPGVAYSILTSDTNKETVTFQAPMFETPQADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQVR
ccHHHHHHHccccccccccccccccccccccccccccccccccHHHcHHHHccccccccccEEEEEEcccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEEEECccccccccccEEEEEEcccHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHHHHccccEEEEEEEccccccccccEEEEcccccEEEEEcccccccccccccccccccccccccccccCEEEcccEEEcHHHHHHHHHccccccccccccHHHHcccccccEEc
********L*****PAVSNRNTGFWGGS*K****SW*L*F*************NKNVTKPGVAYSILTSDTNKETVTFQAPMFE*****PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNV*V*
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MDSCCAAALKANAHPAVSNRNTGFWGGSVKGSLKSWDLNFGSRVWKNLRTEKINKNVTKPGVAYSILTSDTNKETVTFQAPMFETPQADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQVR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.probableP55230
Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.probableQ00081

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.7.-Nucleotidyltransferases.probable
2.7.7.27Glucose-1-phosphate adenylyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YP2, chain A
Confidence level:very confident
Coverage over the Query: 89-347
View the alignment between query and template
View the model in PyMOL