Citrus Sinensis ID: 018955
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 348 | 2.2.26 [Sep-21-2011] | |||||||
| Q03773 | 347 | Glucan endo-1,3-beta-gluc | yes | no | 0.988 | 0.991 | 0.643 | 1e-128 | |
| P52408 | 350 | Glucan endo-1,3-beta-gluc | N/A | no | 0.919 | 0.914 | 0.683 | 1e-127 | |
| P36401 | 339 | Glucan endo-1,3-beta-gluc | N/A | no | 0.910 | 0.935 | 0.650 | 1e-116 | |
| Q01413 | 360 | Glucan endo-1,3-beta-gluc | N/A | no | 0.939 | 0.908 | 0.604 | 1e-113 | |
| P15797 | 371 | Glucan endo-1,3-beta-gluc | N/A | no | 0.962 | 0.902 | 0.595 | 1e-112 | |
| P27666 | 370 | Glucan endo-1,3-beta-gluc | N/A | no | 0.962 | 0.905 | 0.593 | 1e-112 | |
| P23546 | 370 | Glucan endo-1,3-beta-gluc | N/A | no | 0.962 | 0.905 | 0.593 | 1e-111 | |
| P52401 | 363 | Glucan endo-1,3-beta-gluc | N/A | no | 0.939 | 0.900 | 0.598 | 1e-111 | |
| P23431 | 365 | Glucan endo-1,3-beta-gluc | N/A | no | 0.962 | 0.917 | 0.587 | 1e-111 | |
| P07979 | 370 | Lichenase OS=Nicotiana pl | N/A | no | 0.939 | 0.883 | 0.605 | 1e-111 |
| >sp|Q03773|E13A_SOYBN Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/351 (64%), Positives = 282/351 (80%), Gaps = 7/351 (1%)
Query: 1 MAKFFSSLNTPSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNN 60
MAK+ SS + SM + FL LL+ TT AQ GVCYG LGNNLP+ ++V+ALYNQ N
Sbjct: 1 MAKYHSSGKSSSMTAIA-FLFILLITYTGTTDAQSGVCYGRLGNNLPTPQEVVALYNQAN 59
Query: 61 IRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKF 120
IRRMR+Y P+ E LEALRGSNIE++L +PN++LR +AS+Q AN WVQ+N++N+ANNV+F
Sbjct: 60 IRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRF 119
Query: 121 KYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGS 180
+Y++VGNE KP +FAQ+LVPA+ NIQ AI+ AGLGNQ+KVSTAI+TGAL ESFPPS+GS
Sbjct: 120 RYVSVGNEVKPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGS 179
Query: 181 FKQDYR-PILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSL 238
FK DYR LD +IRFL N +PL++N+Y YFA N + ISLDYALFRS VV DGSL
Sbjct: 180 FKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALFRSPSVVVQDGSL 239
Query: 239 SYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV 298
YR+LFDA +DAVYAALEK GGGSL IV+SESGWP++GG T++DNARTYN NL+++V
Sbjct: 240 GYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWPSSGGTA--TSLDNARTYNTNLVRNV 297
Query: 299 KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAP-TRQPRYQINFN 348
K+G+PKRPG P+ETY+FAMFDEN K PE E+ WGLF+P T+QP+Y INFN
Sbjct: 298 KQGTPKRPGAPLETYVFAMFDENQKQ-PEFEKFWGLFSPITKQPKYSINFN 347
|
Is thought to be an important plant defense-related product against fungal pathogens. Is capable of releasing soluble and highly active elicitor molecules from fungus cell walls. Glycine max (taxid: 3847) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9 |
| >sp|P52408|E13B_PRUPE Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 268/325 (82%), Gaps = 5/325 (1%)
Query: 25 MATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEV 84
+AT T A IGVC GM+G++LP + +V+ALY NNI RMRLYDPN ALEALRGSNI++
Sbjct: 30 LATKQHTGAPIGVCNGMVGDDLPPQAEVVALYKTNNIPRMRLYDPNPAALEALRGSNIKL 89
Query: 85 MLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMR 144
+LG+PN +L+ IA +QA AN WVQNNVRN+AN VKFKYIAVGNE KP D+FAQ+LVPAMR
Sbjct: 90 LLGVPNENLQYIALSQANANAWVQNNVRNYAN-VKFKYIAVGNEVKPSDSFAQFLVPAMR 148
Query: 145 NIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLL 204
NIQ AI+ AGL +IKVSTAI+TG LGE+FPPS GSFK +Y +L P+IRFL ++SPLL
Sbjct: 149 NIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLL 208
Query: 205 LNLYPYFAIAGNRQ-ISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSL 263
+NLYPYFA +GN Q I LDYALF + VV DG+ YR+LFDA+LD VYAALEK GGGSL
Sbjct: 209 VNLYPYFAYSGNTQDIRLDYALFTAPSVVVQDGNFGYRNLFDAMLDGVYAALEKAGGGSL 268
Query: 264 GIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGK 323
+VISE+GWP+A G T +DNART+ +NLIQHVK G+P+RPGRPIETYIFAMFDEN K
Sbjct: 269 KVVISETGWPSAAGTA--TTIDNARTFISNLIQHVKEGTPRRPGRPIETYIFAMFDENRK 326
Query: 324 TGPEIERHWGLFAPTRQPRYQINFN 348
T PE+E+HWGLF+PT+QP+YQI+FN
Sbjct: 327 T-PELEKHWGLFSPTKQPKYQISFN 350
|
Is thought to be an important plant defense-related product against fungal pathogens. Prunus persica (taxid: 3760) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P36401|E13H_TOBAC Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/323 (65%), Positives = 253/323 (78%), Gaps = 6/323 (1%)
Query: 29 DTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGL 88
D T AQ GVCYG GN LPS DV++L N+NNIRRMR+YDP++ LEALRGSNIE+MLG+
Sbjct: 20 DFTGAQAGVCYGRQGNGLPSPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGV 79
Query: 89 PNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQY---LVPAMRN 145
PN DL +A++QA A+TWVQNNVRN+ N VKF+YIAVGNE P + ++Y L+ AMRN
Sbjct: 80 PNPDLENVAASQANADTWVQNNVRNYGN-VKFRYIAVGNEVSPLNENSKYVPVLLNAMRN 138
Query: 146 IQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLL 205
IQ AI+ AGLGNQIKVSTAIETG ++ PPS G FK D R ++P+I FL NR+PLL+
Sbjct: 139 IQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLV 198
Query: 206 NLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGI 265
NLYPYFAIA N I L+YALF S + VV+D YR+LFDAILDA Y+ALEK G SL I
Sbjct: 199 NLYPYFAIANNADIKLEYALFTSSEVVVNDNGRGYRNLFDAILDATYSALEKASGSSLEI 258
Query: 266 VISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTG 325
V+SESGWP+AG G LT++DNARTYNNNLI HVK GSPKRP PIETY+FA+FDE+ K
Sbjct: 259 VVSESGWPSAGA-GQLTSIDNARTYNNNLISHVKGGSPKRPSGPIETYVFALFDEDQKD- 316
Query: 326 PEIERHWGLFAPTRQPRYQINFN 348
PEIE+H+GLF+ QP+YQI+FN
Sbjct: 317 PEIEKHFGLFSANMQPKYQISFN 339
|
Implicated in the defense of plants against pathogens. Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|Q01413|E13B_SOLLC Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/336 (60%), Positives = 255/336 (75%), Gaps = 9/336 (2%)
Query: 17 VLFLLGLLMAT-LDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALE 75
++ LLGLL+AT + T AQIGVCYGM+GNNLPS +VI LY NIRR+RLYDPN AL
Sbjct: 8 IIVLLGLLVATNIHITEAQIGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRLYDPNHGALN 67
Query: 76 ALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP---G 132
ALRGSNIEV+LGLPN D++ I+S A WVQ NVR+F +VK KYIAVGNE P
Sbjct: 68 ALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGT 127
Query: 133 DNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPL 192
N A + VPA+ NI AI AGLGN IKVST+++ +G S+PPS+GSF+ D R DP+
Sbjct: 128 SNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPI 187
Query: 193 IRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251
+ FL + R+PLL+N+YPYF+ +GN QISL YALF + VV DGS YR+LFDA+LD+V
Sbjct: 188 VGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSV 247
Query: 252 YAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIE 311
YAA+++TGGGS+GIV+SESGWP+AG GA +NA+TY NLIQH K GSP++PG PIE
Sbjct: 248 YAAMDRTGGGSVGIVVSESGWPSAGAFGATH--ENAQTYLRNLIQHAKEGSPRKPG-PIE 304
Query: 312 TYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
TYIFAMFDEN K PE+E+H+G+F+P +QP+Y +NF
Sbjct: 305 TYIFAMFDENNKN-PELEKHFGMFSPNKQPKYNLNF 339
|
Implicated in the defense of plants against pathogens. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P15797|E13B_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2 | Back alignment and function description |
|---|
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 257/344 (74%), Gaps = 9/344 (2%)
Query: 9 NTPSMAPVVLFLLGLLMATLDTTSAQ-IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY 67
NTP MA + L L L+ +++D AQ IGVCYGMLGNNLP+ +VI LY NI R+RLY
Sbjct: 9 NTPQMAAITLLGLLLVASSIDIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLY 68
Query: 68 DPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGN 127
DPN AL+AL+GSNIEVMLGLPN+D++ IAS A WVQ NV++F +VK KYIAVGN
Sbjct: 69 DPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGN 128
Query: 128 EAKP--GDNF-AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQD 184
E P G ++ +L PAM NI AI AGLGN IKVST+++ +G S+PPS+GSF+ D
Sbjct: 129 EISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRND 188
Query: 185 YRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSL 243
R DP++ FL + R+PLL+N+YPYF+ +GN QISL Y+LF + VV DGS YR+L
Sbjct: 189 ARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNL 248
Query: 244 FDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSP 303
FDA+LD+VYAALE++GG S+GIV+SESGWP+AG GA DNA TY NLIQH K GSP
Sbjct: 249 FDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLRNLIQHAKEGSP 306
Query: 304 KRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
++PG PIETYIFAMFDEN K PE+E+H+GLF+P +QP+Y INF
Sbjct: 307 RKPG-PIETYIFAMFDENNKN-PELEKHFGLFSPNKQPKYNINF 348
|
Implicated in the defense of plants against pathogens. Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P27666|E13F_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 257/344 (74%), Gaps = 9/344 (2%)
Query: 9 NTPSMAPVVLFLLGLLMATLDTTSAQ-IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY 67
NTP MA + L L L+ +T++ AQ IGVCYGMLGNNLP+ +VI LY NI R+RLY
Sbjct: 8 NTPQMAAITLLGLLLVASTIEIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLY 67
Query: 68 DPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGN 127
DPN AL+AL+GSNIEVMLGLPN+D++ IAS A WVQ NV++F +VK KYIAVGN
Sbjct: 68 DPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGN 127
Query: 128 EAKP--GDNF-AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQD 184
E P G ++ +L PAM NI AI AGLGN IKVST+++ +G S+PPS+GSF+ D
Sbjct: 128 EISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRND 187
Query: 185 YRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSL 243
R DP++ FL + R+PLL+N+YPYF+ +GN QISL Y+LF + VV DGS YR+L
Sbjct: 188 ARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNL 247
Query: 244 FDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSP 303
FDA+LD+VYAALE++GG S+GIV+SESGWP+AG GA DNA TY NLIQH K GSP
Sbjct: 248 FDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLRNLIQHAKEGSP 305
Query: 304 KRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
++PG PIETYIFAMFDEN K PE+E+H+GLF+P +QP+Y +NF
Sbjct: 306 RKPG-PIETYIFAMFDENNKN-PELEKHFGLFSPNKQPKYNLNF 347
|
Implicated in the defense of plants against pathogens. Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P23546|E13E_TOBAC Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 257/344 (74%), Gaps = 9/344 (2%)
Query: 9 NTPSMAPVVLFLLGLLMATLDTTSAQ-IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY 67
NTP MA + L L L+ +++D AQ IGVCYGMLGNNLP+ +VI LY NI R+RLY
Sbjct: 8 NTPQMAAITLLGLLLVASSIDIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLY 67
Query: 68 DPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGN 127
DPN AL+AL+GSNIEVMLGLPN+D++ IAS A WVQ NV++F +VK KYIAVGN
Sbjct: 68 DPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGN 127
Query: 128 EAKP--GDNF-AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQD 184
E P G ++ +L PAM NI AI AGLGN IKVST+++ +G S+PPS+GSF+ D
Sbjct: 128 EISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRND 187
Query: 185 YRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSL 243
R +D ++ FL + R+PLL+N+YPYF+ +GN QISL Y+LF + VV DGS YR+L
Sbjct: 188 ARWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNL 247
Query: 244 FDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSP 303
FDA+LD+VYAALE++GG S+GIV+SESGWP+AG GA DNA TY NLIQH K GSP
Sbjct: 248 FDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLRNLIQHAKEGSP 305
Query: 304 KRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
++PG PIETYIFAMFDEN K PE+E+H+GLF+P +QP+Y INF
Sbjct: 306 RKPG-PIETYIFAMFDENNKN-PELEKHFGLFSPNKQPKYNINF 347
|
Implicated in the defense of plants against pathogens. Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P52401|E132_SOLTU Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/336 (59%), Positives = 252/336 (75%), Gaps = 9/336 (2%)
Query: 17 VLFLLGLLMAT-LDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALE 75
V+ LLGLL+AT + T AQ+GVCYGM+GNNLPS +VI LY NI R+RLYDPN+ AL
Sbjct: 8 VIVLLGLLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNQGALN 67
Query: 76 ALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP---G 132
ALRGSNIEV+LGLPN D++ IAS A WVQ NV++F +VK KYIAVGNE P
Sbjct: 68 ALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGT 127
Query: 133 DNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPL 192
+ + VPA+ NI A+ AGLGN IKVST+++ +G S+PPS+GSF+ D R DP+
Sbjct: 128 SSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPI 187
Query: 193 IRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251
+ FL + R+PLL+N+YPYF+ +GN QISL YALF + VV DGS YR+LFDA+LD+V
Sbjct: 188 VGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSV 247
Query: 252 YAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIE 311
YAA+E+TGGGS+GIV+SE GWP+AG GA DNA TY NLIQH K GSP++PG PIE
Sbjct: 248 YAAMERTGGGSVGIVVSECGWPSAGAFGATQ--DNAATYLRNLIQHAKEGSPRKPG-PIE 304
Query: 312 TYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
TYIFAMFDEN K PE+E+H+GLF+P +QP+Y +NF
Sbjct: 305 TYIFAMFDENNKN-PELEKHFGLFSPNKQPKYNLNF 339
|
Is thought to be an important plant defense-related product against fungal pathogens. Solanum tuberosum (taxid: 4113) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P23431|E13B_NICPL Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 258/344 (75%), Gaps = 9/344 (2%)
Query: 9 NTPSMAPVVLFLLGLLMATLDTTSAQ-IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY 67
NTP MA + L L L+ ++++ A+ IGVCYGMLGNNLP+ +VI LY NI R+RLY
Sbjct: 8 NTPQMAAITLLGLLLVASSIEIAGAESIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLY 67
Query: 68 DPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGN 127
DPN AL+AL+GSNIEVMLGLPN+D++ IAS A WVQ NV++F +VK KYIAVGN
Sbjct: 68 DPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGN 127
Query: 128 EAKP--GDNF-AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQD 184
E P G ++ +L PAM NI AI AGLGN IKVST+++ +G S+PPS+GSF+ D
Sbjct: 128 EISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRND 187
Query: 185 YRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSL 243
R +DP++ FL + R+PLL+N+YPYF+ +GN QISL Y+LF + VV DGS YR+L
Sbjct: 188 ARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNL 247
Query: 244 FDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSP 303
FDA+LD+VYAALE++GG S+GIV+SESGWP+AG GA DNA TY NLIQH K GSP
Sbjct: 248 FDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGA--TYDNAATYLKNLIQHAKEGSP 305
Query: 304 KRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
++P RPIETYIFAMFDEN K PE+E+H+GLF+P +QP+Y +NF
Sbjct: 306 RKP-RPIETYIFAMFDENNKN-PELEKHFGLFSPNKQPKYNLNF 347
|
Implicated in the defense of plants against pathogens. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 9 |
| >sp|P07979|GUB_NICPL Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/335 (60%), Positives = 256/335 (76%), Gaps = 8/335 (2%)
Query: 18 LFLLGLLMATLDTTSAQ-IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEA 76
+ LLGLL+++ + AQ +GVCYGMLGNNLP V+ LY NIRRMRLYDPN+ AL+A
Sbjct: 15 IILLGLLVSSTEIVGAQSVGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQA 74
Query: 77 LRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP---GD 133
LRGSNIEVMLG+PN+DL+ IA+N + AN WVQ NVRNF VKF+YIAVGNE P
Sbjct: 75 LRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTS 134
Query: 134 NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLI 193
+ +YL+PAMRNI+NAI++AGL N IKVS++++ +G SFPPS+GSF+ D R +DP+I
Sbjct: 135 SLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPII 194
Query: 194 RFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVY 252
F+ SPLL+N+YPYF+ AGN R ISL YALF + VV DGSL YR+LFDA+ DAVY
Sbjct: 195 GFVRRINSPLLVNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGSLGYRNLFDAMSDAVY 254
Query: 253 AALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIET 312
AAL + GGGS+ IV+SESGWP+AG +NA TY NLIQHVKRGSP+RP + IET
Sbjct: 255 AALSRAGGGSIEIVVSESGWPSAG--AFAATTNNAATYYKNLIQHVKRGSPRRPNKVIET 312
Query: 313 YIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
Y+FAMFDEN K PE+E+H+GLF+P +QP+Y ++F
Sbjct: 313 YLFAMFDENNKN-PELEKHFGLFSPNKQPKYPLSF 346
|
Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 348 | ||||||
| 2274915 | 336 | beta-1,3-glucanase [Citrus sinensis] | 0.965 | 1.0 | 0.985 | 0.0 | |
| 147667132 | 337 | beta-1,3-glucanase [Citrus unshiu] | 0.962 | 0.994 | 0.834 | 1e-160 | |
| 63333659 | 336 | beta-1,3-glucanase class III [Citrus cle | 0.959 | 0.994 | 0.807 | 1e-154 | |
| 261942365 | 341 | glucanase [Litchi chinensis] | 0.971 | 0.991 | 0.702 | 1e-136 | |
| 313600351 | 346 | beta-1,3-glucanase [Malus hupehensis] | 0.982 | 0.988 | 0.701 | 1e-135 | |
| 256372804 | 346 | beta-1,3-glucanase [Malus hupehensis] | 0.982 | 0.988 | 0.693 | 1e-134 | |
| 16903144 | 343 | beta-1,3-glucanase [Prunus persica] | 0.979 | 0.994 | 0.691 | 1e-133 | |
| 188011481 | 345 | beta-1,3-glucanase [Vitis riparia] | 0.988 | 0.997 | 0.644 | 1e-127 | |
| 123243472 | 353 | beta-1,3-glucanase 1 [Prunus avium] | 0.959 | 0.946 | 0.650 | 1e-126 | |
| 351720981 | 347 | glucan endo-1,3-beta-glucosidase precurs | 0.988 | 0.991 | 0.643 | 1e-126 |
| >gi|2274915|emb|CAA03908.1| beta-1,3-glucanase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/336 (98%), Positives = 334/336 (99%)
Query: 13 MAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNRE 72
MAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNRE
Sbjct: 1 MAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNRE 60
Query: 73 ALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 132
ALEALRGSNIEVMLGLPN+DLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG
Sbjct: 61 ALEALRGSNIEVMLGLPNDDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 120
Query: 133 DNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPL 192
DNFAQYLVPAMRNIQNAIN AGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPL
Sbjct: 121 DNFAQYLVPAMRNIQNAINRAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPL 180
Query: 193 IRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVY 252
IRFLNENRSPLL+NLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVY
Sbjct: 181 IRFLNENRSPLLVNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVY 240
Query: 253 AALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIET 312
AALEKTGGGSL IVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPK+PGRPIET
Sbjct: 241 AALEKTGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKKPGRPIET 300
Query: 313 YIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
YIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN
Sbjct: 301 YIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 336
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147667132|gb|ABQ45848.1| beta-1,3-glucanase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/338 (83%), Positives = 305/338 (90%), Gaps = 3/338 (0%)
Query: 13 MAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNRE 72
MA V++ LLG+L+ATLDTTSAQIGVCYGMLG+NLPSK DVIALYNQNNIRRMRLYDPN+E
Sbjct: 1 MASVIILLLGMLIATLDTTSAQIGVCYGMLGDNLPSKPDVIALYNQNNIRRMRLYDPNKE 60
Query: 73 ALEALRGSNIEVMLGLPNND--LRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAK 130
ALEALRGSNIEVMLG+PN+ LRRIASNQAEANTWVQ+NV+NF NNVKFKYIAVGNEAK
Sbjct: 61 ALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWVQDNVQNFVNNVKFKYIAVGNEAK 120
Query: 131 PGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILD 190
PGD+FAQYLVPAMRNIQNAIN A LG+QIKVSTAI GAL +S PPS GSF QDYRPILD
Sbjct: 121 PGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILD 180
Query: 191 PLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDA 250
PLI FLNEN SPLL+NLYPYFAI G+RQISLDYALFRSQQ VVSD LSY++LFDA LDA
Sbjct: 181 PLITFLNENNSPLLVNLYPYFAIVGDRQISLDYALFRSQQPVVSDPPLSYQNLFDAQLDA 240
Query: 251 VYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPI 310
YAALEK GGGSL IVISE GWPTAGGDGALTNVDNARTYNNNLIQHVK+GSPK+P RPI
Sbjct: 241 TYAALEKAGGGSLDIVISERGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKP-RPI 299
Query: 311 ETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
ETYIFAMFDE K G EIERHWGLF+P +Q +YQ+NFN
Sbjct: 300 ETYIFAMFDEKDKKGDEIERHWGLFSPDKQTKYQVNFN 337
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|63333659|gb|AAY40462.1| beta-1,3-glucanase class III [Citrus clementina x Citrus reticulata] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/338 (80%), Positives = 300/338 (88%), Gaps = 4/338 (1%)
Query: 13 MAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNRE 72
MA V++ LLG+L+ATLDTTSAQIGVCYGMLG+NLPSK DVIALYNQNNIRRMRLYDPN+E
Sbjct: 1 MASVIILLLGMLIATLDTTSAQIGVCYGMLGDNLPSKPDVIALYNQNNIRRMRLYDPNKE 60
Query: 73 ALEALRGSNIEVMLGLPNND--LRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAK 130
ALEALRGSNIEVM+G+ N+ LRRIAS QAEANTWVQ+NV+NF NNVKFKYIAVGNEAK
Sbjct: 61 ALEALRGSNIEVMMGVSNDFDLLRRIASKQAEANTWVQDNVQNFVNNVKFKYIAVGNEAK 120
Query: 131 PGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILD 190
PGD+FAQYLVPAMRNIQNAIN A LG+QIKVSTAI +S PPS GSF QDYRPILD
Sbjct: 121 PGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAGALDTKSSPPSAGSFNQDYRPILD 180
Query: 191 PLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDA 250
PLI FLNEN SPLL+NLYPYFAI G+RQISLDYALFRSQQ VVSD LSY++LFDA LDA
Sbjct: 181 PLITFLNENNSPLLVNLYPYFAIVGDRQISLDYALFRSQQPVVSDPPLSYQNLFDAQLDA 240
Query: 251 VYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPI 310
YAALEK GGSL IV+SESGWP+A GDGALT+VDNARTYNNNLIQHVK+GSPK+P RPI
Sbjct: 241 TYAALEKPVGGSLDIVVSESGWPSA-GDGALTSVDNARTYNNNLIQHVKQGSPKKPSRPI 299
Query: 311 ETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
ETYIFAMFDE+ K G EIERHWGLF+P RQ +YQ+NFN
Sbjct: 300 ETYIFAMFDED-KKGDEIERHWGLFSPDRQTKYQVNFN 336
|
Source: Citrus clementina x Citrus reticulata Species: Citrus clementina x Citrus reticulata Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|261942365|gb|ACY06774.1| glucanase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/350 (70%), Positives = 296/350 (84%), Gaps = 12/350 (3%)
Query: 1 MAKFFSSLNTPSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNN 60
MAK FS+ SM + FL+GLLMATLDTT+AQ+GVCYGM+G+NLPSK +VI LY Q N
Sbjct: 1 MAKPFSA----SMVSTI-FLIGLLMATLDTTAAQVGVCYGMMGSNLPSKAEVIQLYKQKN 55
Query: 61 IRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKF 120
I+RMRLYDP+R+AL AL+GSNIEVMLG+PN DL++IASNQAEANTWVQNNV+N+ +V+F
Sbjct: 56 IKRMRLYDPDRQALNALKGSNIEVMLGVPNPDLQKIASNQAEANTWVQNNVKNYG-DVRF 114
Query: 121 KYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGE-SFPPSRG 179
+YIAVGNE KPGDNFAQ+LVPAMRNI++A+N+AGL N IKVSTAIETGAL + SFPPS+G
Sbjct: 115 RYIAVGNEVKPGDNFAQFLVPAMRNIRSALNSAGLRN-IKVSTAIETGALADGSFPPSKG 173
Query: 180 SFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSD--GS 237
SFKQDY IL+PLIRFLNEN+SPLL+NLYP+FA N I+LDYALFR VV+D
Sbjct: 174 SFKQDYLAILNPLIRFLNENQSPLLVNLYPFFAKKDNPSINLDYALFRPSAPVVTDNGNG 233
Query: 238 LSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQH 297
L+YR+LFDAILD VYAAL K+GG +L IV+SESGWP+AG G LT++DNARTYN NL+ H
Sbjct: 234 LTYRNLFDAILDTVYAALGKSGGANLEIVVSESGWPSAGA-GDLTSLDNARTYNTNLVXH 292
Query: 298 VKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
VK G+PK+PGRP+ETY+FAMFDENGK+ PE E+ WGLF P +QP+Y I F
Sbjct: 293 VKXGTPKKPGRPVETYVFAMFDENGKS-PEYEKFWGLFHPNKQPKYSIGF 341
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|313600351|gb|ADR71671.1| beta-1,3-glucanase [Malus hupehensis] | Back alignment and taxonomy information |
|---|
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/352 (70%), Positives = 291/352 (82%), Gaps = 10/352 (2%)
Query: 1 MAKFFSSLNT---PSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYN 57
MAK SS+ PS+ ++L +LG LMA+ +TT AQIGVCYGM G+ LP + +VIALY
Sbjct: 1 MAKSSSSVGRARGPSVISIIL-VLGQLMASFETTGAQIGVCYGMNGD-LPPQAEVIALYK 58
Query: 58 QNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANN 117
Q NIRRMRLYDPN AL ALRGS+IE+MLGLPN+ L+ IAS+QA ANTWVQNNVRN+AN
Sbjct: 59 QKNIRRMRLYDPNPAALAALRGSDIELMLGLPNDQLQNIASSQANANTWVQNNVRNYAN- 117
Query: 118 VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPS 177
V+FKYIAVGNE KP D+ AQ+LVPAMRNIQNAI++AGLGNQIKVSTAI+TG LG SFPPS
Sbjct: 118 VRFKYIAVGNEIKPSDSSAQFLVPAMRNIQNAISSAGLGNQIKVSTAIDTGVLGNSFPPS 177
Query: 178 RGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDG 236
+G F+ DY PIL+P++RFL +N+SPLL N+YPYF+ GN R I LDYALF + VV DG
Sbjct: 178 KGEFRGDYSPILNPVVRFLVDNKSPLLDNMYPYFSYIGNTRDIRLDYALFTATSVVVQDG 237
Query: 237 SLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQ 296
YR+LFDAILDAVYAAL+K GGGSL IVISESGWPTAGG T VDNARTYN+NL+Q
Sbjct: 238 QFGYRNLFDAILDAVYAALDKIGGGSLEIVISESGWPTAGGTA--TTVDNARTYNSNLVQ 295
Query: 297 HVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
HVK G+P++PGRPIETYIFAMFDEN KT PE+E+HWGLF+P +QP+Y INFN
Sbjct: 296 HVKGGTPRKPGRPIETYIFAMFDENRKT-PELEKHWGLFSPNKQPKYPINFN 346
|
Source: Malus hupehensis Species: Malus hupehensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|256372804|gb|ACU78080.1| beta-1,3-glucanase [Malus hupehensis] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/352 (69%), Positives = 291/352 (82%), Gaps = 10/352 (2%)
Query: 1 MAKFFSSLNT---PSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYN 57
MAK SS+ PS+ ++L +LG LMA+ +TT AQIGVCYGM G+ LP + +VIALY
Sbjct: 1 MAKPSSSVGRARGPSVISIIL-VLGQLMASFETTGAQIGVCYGMNGD-LPPQAEVIALYK 58
Query: 58 QNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANN 117
Q NIRRMRLYDP+ AL ALRGS+ E+MLG+PN+ L+ IAS+QA ANTWVQNNVRN+AN
Sbjct: 59 QKNIRRMRLYDPSPAALAALRGSDTELMLGIPNDQLQNIASSQANANTWVQNNVRNYAN- 117
Query: 118 VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPS 177
V+FKYIAVGNE KP D+ AQ+LVPAMRNIQNAI++AGLGNQIKVSTAI+TG LG SFPPS
Sbjct: 118 VRFKYIAVGNEIKPSDSSAQFLVPAMRNIQNAISSAGLGNQIKVSTAIDTGVLGNSFPPS 177
Query: 178 RGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDG 236
+G F+ DY PIL+P++RFL +N+SPLL+NLYPYF+ GN R I LDYALF +Q VV DG
Sbjct: 178 KGEFRGDYSPILNPVVRFLVDNKSPLLVNLYPYFSYIGNTRDIRLDYALFTAQSVVVQDG 237
Query: 237 SLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQ 296
YR+LFDAIL AVYAAL+K GGGSL IV+SESGWPTAGG T VDNARTYN+NL+Q
Sbjct: 238 ERGYRNLFDAILGAVYAALDKVGGGSLEIVVSESGWPTAGGTA--TTVDNARTYNSNLVQ 295
Query: 297 HVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
HVK G+P++PGRPIETYIFAMFDEN KT PE+E+HWGLF+P +QP+Y INFN
Sbjct: 296 HVKGGTPRKPGRPIETYIFAMFDENRKT-PELEKHWGLFSPNKQPKYPINFN 346
|
Source: Malus hupehensis Species: Malus hupehensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16903144|gb|AAL30426.1|AF435089_1 beta-1,3-glucanase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/350 (69%), Positives = 288/350 (82%), Gaps = 9/350 (2%)
Query: 1 MAKFFSSLNT-PSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQN 59
MAK SS+ PSM +V FLLGLLMA+ +TT AQIGVCYGMLG+ LP +VIALY QN
Sbjct: 1 MAKSNSSVGRGPSMISIV-FLLGLLMASFETTGAQIGVCYGMLGDRLPPPSEVIALYKQN 59
Query: 60 NIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVK 119
NIRRMRLYDPN+ AL AL+GS IE+MLG+PN++L+ +AS+QA ANTWVQNNVRN+ NV+
Sbjct: 60 NIRRMRLYDPNQAALAALKGSYIELMLGVPNDNLQSLASSQANANTWVQNNVRNYG-NVR 118
Query: 120 FKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRG 179
FKYIAVGNE KP D++AQ+LVPAM+NIQNAI++AGLG IKVSTA++TG LG SFPPS+G
Sbjct: 119 FKYIAVGNEVKPSDSYAQFLVPAMQNIQNAISSAGLG--IKVSTAVDTGVLGNSFPPSKG 176
Query: 180 SFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSL 238
FK +Y +L+P+IRFL NRSPLL+NLYPYF+ + N I LDYALF + VV DG
Sbjct: 177 EFKSEYGALLNPIIRFLVNNRSPLLVNLYPYFSYSSNTHDIRLDYALFTAPSVVVQDGQR 236
Query: 239 SYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV 298
YR+LFDAILDAVYAALEK GGGSL IVISESGWP+AGG T +DNARTYN NLIQHV
Sbjct: 237 GYRNLFDAILDAVYAALEKAGGGSLEIVISESGWPSAGGTA--TTIDNARTYNANLIQHV 294
Query: 299 KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
K G+P++PGR IETYIFAMFDEN K PE+E+HWGLF+P++QP+Y INFN
Sbjct: 295 KGGTPRKPGRAIETYIFAMFDENRKN-PELEKHWGLFSPSKQPKYPINFN 343
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|188011481|gb|ACD45060.1| beta-1,3-glucanase [Vitis riparia] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/349 (64%), Positives = 279/349 (79%), Gaps = 5/349 (1%)
Query: 1 MAKFFSSLNTPSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNN 60
MA F S++ + S +L + GLLMA+L T AQ GVCYGM G+NLP V+ LYNQ +
Sbjct: 1 MAMFDSTVKSSSRMATLLLVFGLLMASLHLTVAQTGVCYGMQGDNLPPPGQVVGLYNQYS 60
Query: 61 IRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKF 120
IRRMRLYDPN+ AL+ALRGSNIE+M+G+PN+ L+ IAS+Q AN+WVQNN++N+ NV+F
Sbjct: 61 IRRMRLYDPNQAALQALRGSNIELMIGVPNDALQNIASSQGNANSWVQNNIKNYG-NVRF 119
Query: 121 KYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGS 180
+Y+AVGNE P + AQ+++PAMRNI NAI+AAGLGNQIKVSTAI+TG LG S+PPS+G+
Sbjct: 120 RYVAVGNEVSPTGSTAQFVLPAMRNIFNAISAAGLGNQIKVSTAIDTGVLGTSYPPSQGA 179
Query: 181 FKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLS 239
FK + L+P+I FL NR+PLL+NLYPYF+ GN R I LDYALF + VV DG L
Sbjct: 180 FKPEVTSFLNPIISFLVNNRAPLLVNLYPYFSYIGNTRDIRLDYALFTAPGVVVQDGQLG 239
Query: 240 YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK 299
YR+LFDAILDAVY+ALEK GGGSL +VISESGWP+AGG T VDNA+TYN+NLIQHVK
Sbjct: 240 YRNLFDAILDAVYSALEKAGGGSLQVVISESGWPSAGGTA--TTVDNAKTYNSNLIQHVK 297
Query: 300 RGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
G+PK+PG PIETY+FAMFDEN K+ PE E+HWGLF+P +QP+Y INFN
Sbjct: 298 GGTPKKPGGPIETYVFAMFDENRKS-PEYEKHWGLFSPNKQPKYPINFN 345
|
Source: Vitis riparia Species: Vitis riparia Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|123243472|gb|ABM74067.1| beta-1,3-glucanase 1 [Prunus avium] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/346 (65%), Positives = 276/346 (79%), Gaps = 12/346 (3%)
Query: 11 PSMAPVVLFLLGLLMATLDT-------TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRR 63
PS+ +V+ L L++A+L T A IGVC GM+G++LP + +V+ALY +NNI R
Sbjct: 12 PSLISIVVLLGQLVVASLATNKHTKVHAGAPIGVCNGMVGDDLPPQAEVVALYKKNNIPR 71
Query: 64 MRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYI 123
MRLYDPN ALEALRGSNI+++LG+PN +L+ IAS+QA AN WVQNNVRN+AN VKF+YI
Sbjct: 72 MRLYDPNPAALEALRGSNIKLLLGVPNENLQYIASSQANANAWVQNNVRNYAN-VKFQYI 130
Query: 124 AVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQ 183
AVGNE KP D+FAQ+LVPAMR IQ I+ AGL +IKVSTAI+TG LGE+FPPS GSFK
Sbjct: 131 AVGNEVKPSDSFAQFLVPAMRKIQKEISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKS 190
Query: 184 DYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQ-ISLDYALFRSQQTVVSDGSLSYRS 242
+Y +L P+IRFL ++SPLL+NLYPYFA +GN Q I LDYALF + VV DG YR+
Sbjct: 191 EYDALLHPIIRFLVNHKSPLLVNLYPYFAYSGNTQDIRLDYALFTAPSIVVQDGKFGYRN 250
Query: 243 LFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGS 302
LFDA+LD VYAALEK GGGSL +VISE+GWP+A G T +DNARTY +NLIQHVK G+
Sbjct: 251 LFDAMLDGVYAALEKAGGGSLKVVISETGWPSAAGTA--TTIDNARTYISNLIQHVKEGT 308
Query: 303 PKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
P+RPGRPIETYIFAMFDEN KT PE+E+HWGLF+PT+QP+YQ +FN
Sbjct: 309 PRRPGRPIETYIFAMFDENRKT-PELEKHWGLFSPTKQPKYQSSFN 353
|
Source: Prunus avium Species: Prunus avium Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720981|ref|NP_001238474.1| glucan endo-1,3-beta-glucosidase precursor [Glycine max] gi|1706546|sp|Q03773.1|E13A_SOYBN RecName: Full=Glucan endo-1,3-beta-glucosidase; AltName: Full=(1->3)-beta-glucan endohydrolase; Short=(1->3)-beta-glucanase; AltName: Full=Beta-1,3-endoglucanase; Flags: Precursor gi|169923|gb|AAA33946.1| beta-1,3-endoglucanase (EC 3.2.1.39) [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/351 (64%), Positives = 282/351 (80%), Gaps = 7/351 (1%)
Query: 1 MAKFFSSLNTPSMAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNN 60
MAK+ SS + SM + FL LL+ TT AQ GVCYG LGNNLP+ ++V+ALYNQ N
Sbjct: 1 MAKYHSSGKSSSMTAIA-FLFILLITYTGTTDAQSGVCYGRLGNNLPTPQEVVALYNQAN 59
Query: 61 IRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKF 120
IRRMR+Y P+ E LEALRGSNIE++L +PN++LR +AS+Q AN WVQ+N++N+ANNV+F
Sbjct: 60 IRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRF 119
Query: 121 KYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGS 180
+Y++VGNE KP +FAQ+LVPA+ NIQ AI+ AGLGNQ+KVSTAI+TGAL ESFPPS+GS
Sbjct: 120 RYVSVGNEVKPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGS 179
Query: 181 FKQDYR-PILDPLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSL 238
FK DYR LD +IRFL N +PL++N+Y YFA N + ISLDYALFRS VV DGSL
Sbjct: 180 FKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALFRSPSVVVQDGSL 239
Query: 239 SYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV 298
YR+LFDA +DAVYAALEK GGGSL IV+SESGWP++GG T++DNARTYN NL+++V
Sbjct: 240 GYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWPSSGGTA--TSLDNARTYNTNLVRNV 297
Query: 299 KRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAP-TRQPRYQINFN 348
K+G+PKRPG P+ETY+FAMFDEN K PE E+ WGLF+P T+QP+Y INFN
Sbjct: 298 KQGTPKRPGAPLETYVFAMFDENQKQ-PEFEKFWGLFSPITKQPKYSINFN 347
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 348 | ||||||
| TAIR|locus:2082518 | 341 | BG3 ""beta-1,3-glucanase 3"" [ | 0.936 | 0.956 | 0.616 | 9.2e-107 | |
| TAIR|locus:2082568 | 340 | BG1 ""beta-1,3-glucanase 1"" [ | 0.954 | 0.976 | 0.590 | 5.1e-106 | |
| TAIR|locus:2082543 | 339 | BGL2 ""beta-1,3-glucanase 2"" | 0.954 | 0.979 | 0.569 | 1.5e-99 | |
| TAIR|locus:2130329 | 344 | AT4G16260 [Arabidopsis thalian | 0.936 | 0.947 | 0.557 | 3e-94 | |
| TAIR|locus:2164991 | 506 | AT5G56590 [Arabidopsis thalian | 0.951 | 0.654 | 0.402 | 9.9e-71 | |
| TAIR|locus:2161710 | 465 | AT5G55180 [Arabidopsis thalian | 0.965 | 0.722 | 0.403 | 2.6e-63 | |
| TAIR|locus:2116327 | 455 | AT4G26830 [Arabidopsis thalian | 0.945 | 0.723 | 0.388 | 6.2e-62 | |
| TAIR|locus:2149209 | 344 | AT5G20390 [Arabidopsis thalian | 0.931 | 0.941 | 0.392 | 6.2e-62 | |
| TAIR|locus:2203206 | 346 | AT1G77790 [Arabidopsis thalian | 0.936 | 0.942 | 0.389 | 1.6e-61 | |
| TAIR|locus:2118339 | 534 | AT4G29360 [Arabidopsis thalian | 0.951 | 0.619 | 0.391 | 2.1e-61 |
| TAIR|locus:2082518 BG3 ""beta-1,3-glucanase 3"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 207/336 (61%), Positives = 255/336 (75%)
Query: 15 PVVLFLLGLLMATL-DTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREA 73
P++L LL ++A+ DT QIGVCYG GNNL +V+ALY Q NIRRMRLYDPN+E
Sbjct: 14 PLLLLLLSFILASFFDTAVGQIGVCYGRNGNNLRPASEVVALYQQRNIRRMRLYDPNQET 73
Query: 74 LEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD 133
L ALRGSNIE++L +PN DL+R+AS+QAEA+TWV+NNVRN+AN V F+YI+VGNE +P D
Sbjct: 74 LNALRGSNIELVLDVPNPDLQRLASSQAEADTWVRNNVRNYAN-VTFRYISVGNEVQPSD 132
Query: 134 NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLI 193
A +++PAM+NI+ A+++ G IKVSTAI+T + FPPS G+F ++R + P+I
Sbjct: 133 QAASFVLPAMQNIERAVSSLG----IKVSTAIDTRGIS-GFPPSSGTFTPEFRSFIAPVI 187
Query: 194 RFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVY 252
FL+ +SPLL+N YPYF+ GN R I LDY LF + TVV+DG YR+LF AILD VY
Sbjct: 188 SFLSSKQSPLLVNNYPYFSYTGNMRDIRLDYTLFTAPSTVVNDGQNQYRNLFHAILDTVY 247
Query: 253 AALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIET 312
A+LEK GGGSL IV+SESGWPTAGG A T VDNARTY NNLIQ VK GSP+RPGR ET
Sbjct: 248 ASLEKAGGGSLEIVVSESGWPTAGG--AATGVDNARTYVNNLIQTVKNGSPRRPGRATET 305
Query: 313 YIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
YIFAMFDEN K GPE E+ WGLF P QP+Y +NFN
Sbjct: 306 YIFAMFDENSKQGPETEKFWGLFLPNLQPKYVVNFN 341
|
|
| TAIR|locus:2082568 BG1 ""beta-1,3-glucanase 1"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 199/337 (59%), Positives = 258/337 (76%)
Query: 13 MAPVVLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNRE 72
+A + L LLGL + T Q+GVCYG GNNLPS + IAL+ Q NI+R+RLY P+ +
Sbjct: 6 LASLTL-LLGLFFVNTNPTGGQVGVCYGRNGNNLPSPAETIALFKQKNIQRVRLYSPDHD 64
Query: 73 ALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 132
L ALRGSNIEV LGLPN+ L+ +AS+Q++AN WVQ V N+AN V+F+YI+VGNE K
Sbjct: 65 VLAALRGSNIEVTLGLPNSYLQSVASSQSQANAWVQTYVMNYANGVRFRYISVGNEVKIS 124
Query: 133 DNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPL 192
D++AQ+LVPAM NI A+ AAGLG +IKVST+++ G L ES+PPS+GSF+ D +++P+
Sbjct: 125 DSYAQFLVPAMENIDRAVLAAGLGGRIKVSTSVDMGVLRESYPPSKGSFRGDVMVVMEPI 184
Query: 193 IRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251
IRFL SPLLLNLY YF+ AGN QI LDYALF + +VSD SY++LFDA+LDA+
Sbjct: 185 IRFLVSKNSPLLLNLYTYFSYAGNVGQIRLDYALFTAPSGIVSDPPRSYQNLFDAMLDAM 244
Query: 252 YAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIE 311
Y+ALEK+GG SL IV++E+GWPT GG TN++NAR YNNNLI+HVK G+PKRPG+ IE
Sbjct: 245 YSALEKSGGASLEIVVAETGWPTGGGTD--TNIENARIYNNNLIKHVKNGTPKRPGKEIE 302
Query: 312 TYIFAMFDENGK-TGPEIERHWGLFAPTRQPRYQINF 347
TY+FA++DEN K T P +E+ WGLF P +QP+Y INF
Sbjct: 303 TYLFAIYDENQKPTPPYVEKFWGLFYPNKQPKYDINF 339
|
|
| TAIR|locus:2082543 BGL2 ""beta-1,3-glucanase 2"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 196/344 (56%), Positives = 262/344 (76%)
Query: 7 SLNTPSMAPVVLFLLGLLMATL-DTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMR 65
SL +P P+++ LL L++A+ + T+ QIGVCYGMLG+ LPS DV+ALY Q NI+RMR
Sbjct: 6 SLASP---PMLMILLSLVIASFFNHTAGQIGVCYGMLGDTLPSPSDVVALYKQQNIQRMR 62
Query: 66 LYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAV 125
LY P+ AL ALRGS+IE++L +P++DL R+AS+Q EA+ WVQ NV+++ + V+F+YI V
Sbjct: 63 LYGPDPGALAALRGSDIELILDVPSSDLERLASSQTEADKWVQENVQSYRDGVRFRYINV 122
Query: 126 GNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDY 185
GNE KP + +L+ AM+NI+NA++ AGL ++KVSTAI T ++ PPS+G F+ +Y
Sbjct: 123 GNEVKP--SVGGFLLQAMQNIENAVSGAGL--EVKVSTAIATDTTTDTSPPSQGRFRDEY 178
Query: 186 RPILDPLIRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLF 244
+ L+P+I FL +SPLL+NLYPYF+ G+ I LDYALF +Q TV +D SY++LF
Sbjct: 179 KSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALFTAQSTVDNDPGYSYQNLF 238
Query: 245 DAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPK 304
DA LD+VYAALEK+GGGSL IV+SE+GWPT G G T+V+NA+TY NNLIQHVK GSP+
Sbjct: 239 DANLDSVYAALEKSGGGSLEIVVSETGWPTEGAVG--TSVENAKTYVNNLIQHVKNGSPR 296
Query: 305 RPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
RPG+ IETYIFAMFDEN K P E+ WGLF P RQ +Y++NFN
Sbjct: 297 RPGKAIETYIFAMFDENKKE-PTYEKFWGLFHPDRQSKYEVNFN 339
|
|
| TAIR|locus:2130329 AT4G16260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 188/337 (55%), Positives = 245/337 (72%)
Query: 18 LFLLGLLMAT--LDTTSAQ-IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREAL 74
LFLL L T L+ TS + +GVCYGM+GNNLPS+ D IAL+ QNNIRR+RLYDPN+ AL
Sbjct: 4 LFLLIALFITTILNPTSGESVGVCYGMMGNNLPSQSDTIALFRQNNIRRVRLYDPNQAAL 63
Query: 75 EALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN 134
ALR + IEV++G+PN DLR + +N + A +W+QNNV N+ V FKYIAVGNE P N
Sbjct: 64 NALRNTGIEVIIGVPNTDLRSL-TNPSSARSWLQNNVLNYYPAVSFKYIAVGNEVSPS-N 121
Query: 135 FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194
++PAMRN+ +A+ A L ++IKVSTAI+ +G SFPPS G F+ D R +DP+I
Sbjct: 122 GGDVVLPAMRNVYDALRGANLQDRIKVSTAIDMTLIGNSFPPSSGEFRGDVRWYIDPVIG 181
Query: 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYA 253
FL S LL N+YPYF+ N R ISL YALF S VV DGS Y++LFDA+LD VY+
Sbjct: 182 FLTSTNSALLANIYPYFSYVDNPRDISLSYALFTSPSVVVWDGSRGYQNLFDALLDVVYS 241
Query: 254 ALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK--RGSPKRPGRPIE 311
A+E++GGGSL +V+SESGWP+ GG+ A + DNAR + NL V+ RG+PKRPGR +E
Sbjct: 242 AVERSGGGSLPVVVSESGWPSNGGNAA--SFDNARAFYTNLASRVRENRGTPKRPGRGVE 299
Query: 312 TYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
TY+FAMFDEN K+ PEIE+++GLF P +QP++ I F+
Sbjct: 300 TYLFAMFDENQKS-PEIEKNFGLFFPNKQPKFPITFS 335
|
|
| TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 137/340 (40%), Positives = 217/340 (63%)
Query: 17 VLFLLGLLMATLDTT-SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALE 75
++F + +L+ LD ++GVCYG ++LP+ V+ L Q+NI+ +R+YD N + L+
Sbjct: 7 LIFSISILLLLLDCCYGGKVGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLK 66
Query: 76 ALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAK--PGD 133
A ++IE+M+G+PN+DL + +Q+ +TW++N+V + K YI VG E+ P
Sbjct: 67 AFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHI 126
Query: 134 NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLI 193
N + ++VPAM+N+ A+ GL +IKVST + G L SFPPS G+F Y L P++
Sbjct: 127 NASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPML 186
Query: 194 RFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGS-LSYRSLFDAILDAV 251
FL EN+SP +++LYPY+A + +SLDY LF S V+ + L Y+++FDA +DA+
Sbjct: 187 EFLAENKSPFMIDLYPYYAYRDSPNNVSLDYVLFESSSEVIDPNTGLLYKNMFDAQVDAL 246
Query: 252 YAALEKTGGGSLGIVISESGWPTAGG--DGALTNVDNARTYNNNLIQHV--KRGSPKRPG 307
Y AL ++ I+++E+GWPT G + A + DNA TYN+N+I+HV +G+P +PG
Sbjct: 247 YYALTALNFRTIKIMVTETGWPTKGSPKEKAAASSDNAETYNSNIIRHVVTNQGTPAKPG 306
Query: 308 RPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
+ YIF++F+EN K G + ER+WGLF P + YQ++F
Sbjct: 307 EAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDF 346
|
|
| TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 140/347 (40%), Positives = 204/347 (58%)
Query: 13 MAPVVLFLLGLL-MATLDTT---SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYD 68
MA VL LL L + + T S IGV YG + +NLP+ V+ L I R++LYD
Sbjct: 1 MAVFVLSLLILSSFSAIPFTYADSGMIGVNYGRIADNLPAPEKVVELLKTQGINRIKLYD 60
Query: 69 PNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNE 128
L AL S I+V++ LPN +L A++Q+ +TWVQ+N++ + + IAVGNE
Sbjct: 61 TETTVLTALANSGIKVVVSLPNENLASAAADQSYTDTWVQDNIKKYIPATDIEAIAVGNE 120
Query: 129 AKPGD-NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDY-R 186
N YLVPAM+N+Q+++ L IK+S+ I AL S+PPS GSFK +
Sbjct: 121 VFVDPRNTTTYLVPAMKNVQSSLVKFNLDKSIKISSPIALSALASSYPPSAGSFKPELIE 180
Query: 187 PILDPLIRFLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGS-LSYRSLF 244
P++ P++ L + S L++N YP+FA A N +ISLDYALF+ V G+ L Y SL
Sbjct: 181 PVIKPMLDLLRKTSSHLMVNAYPFFAYAANADKISLDYALFKENAGNVDSGNGLKYNSLL 240
Query: 245 DAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGAL-TNVDNARTYNNNLIQHVK--RG 301
DA +DAV+AA+ G + +V++E+GWP+AG + + NA YN L++ V G
Sbjct: 241 DAQIDAVFAAMSAVGFNDVKLVVTETGWPSAGDENEIGAGSANAAAYNGGLVKRVLTGNG 300
Query: 302 SPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348
+P +P P+ Y+FA+F+EN KTGP ER++GLF P Y ++ N
Sbjct: 301 TPLKPKEPLNVYLFALFNENQKTGPTSERNYGLFYPNENKVYDVSLN 347
|
|
| TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 130/335 (38%), Positives = 197/335 (58%)
Query: 19 FLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALR 78
FL+ ++ +D S +GV YG + NNLPS V+ L I R++++D ++ L AL
Sbjct: 9 FLILSFLSAIDAHSGMVGVNYGRIANNLPSPEKVVNLLKSQGINRIKIFDTDKNVLTALA 68
Query: 79 GSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQY 138
S I+V++ LPN L AS+Q+ A+ W++ ++ + + + IAVGNE Y
Sbjct: 69 NSKIKVIVALPNELLSSAASHQSFADNWIKTHIMPYFPATEIEAIAVGNEVFVDPTITPY 128
Query: 139 LVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDY-RPILDPLIRFLN 197
LV AM+NI ++ L IK+S+ I AL S+PPS GSFK + P++ P++ L
Sbjct: 129 LVNAMKNIHTSLVKYKLDKAIKISSPIALSALANSYPPSSGSFKPELIEPVVKPMLALLQ 188
Query: 198 ENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGS-LSYRSLFDAILDAVYAAL 255
+ S L++N YP+FA A N +ISLDYALF+ + G+ L Y SLFDA +DAVYAAL
Sbjct: 189 QTSSYLMVNAYPFFAYAANADKISLDYALFKENAGNIDSGTGLKYNSLFDAQIDAVYAAL 248
Query: 256 EKTGGGSLGIVISESGWPTAGGDGAL-TNVDNARTYNNNLIQHVK--RGSPKRPGRPIET 312
G + ++++E+GWP+ G + + + NA YN L++ V +G+P RP P+
Sbjct: 249 SAVGFKGVKVMVTETGWPSVGDENEIGASESNAAAYNAGLVKRVLTGKGTPLRPTEPLNV 308
Query: 313 YIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
Y+FA+F+EN K GP ER++GLF P Y + F
Sbjct: 309 YLFALFNENQKPGPTSERNYGLFYPNEGKVYNVPF 343
|
|
| TAIR|locus:2149209 AT5G20390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 131/334 (39%), Positives = 202/334 (60%)
Query: 17 VLFLLGLLMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEA 76
V FLL + IG+ YG+LG+NLP +VI LY ++ +R++D + L A
Sbjct: 15 VAFLLNYSNVGFVDAATNIGLNYGLLGDNLPPPSEVINLYKSLSVTNIRIFDTTTDVLNA 74
Query: 77 LRGS-NIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNF 135
RG+ NI VM+ + N DL ++ ++ NTW N+ + +V +IAVGNE PG+
Sbjct: 75 FRGNRNIGVMVDVKNQDLEALSVSEEAVNTWFVTNIEPYLADVNITFIAVGNEVIPGE-I 133
Query: 136 AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRF 195
Y++P M+++ N + + L I +ST + LG+S+PPS G F R L P+++F
Sbjct: 134 GSYVLPVMKSLTNIVKSRSL--PILISTTVAMTNLGQSYPPSAGDFMPQAREQLTPVLKF 191
Query: 196 LNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAA 254
L++ +P+L+N+YPYFA A + I LDYA+F + + VV DG L Y ++FD I DA A
Sbjct: 192 LSQTNTPILVNIYPYFAYAADPINIQLDYAIFNTNKVVVQDGPLGYTNMFDVIFDAFVWA 251
Query: 255 LEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK--RGSPKRPGRPIET 312
+EK G L +V++E+GWP+AG +G LT D A YN N ++HV+ +G+PKRP I
Sbjct: 252 MEKEGVKDLPMVVTETGWPSAG-NGNLTTPDIASIYNTNFVKHVESGKGTPKRPKSGISG 310
Query: 313 YIFAMFDENGKTGPEIERHWGLFAPT-RQPRYQI 345
++FA F+EN K E+++GL+ PT +P Y++
Sbjct: 311 FLFATFNENQKPAGT-EQNFGLYNPTDMKPIYKM 343
|
|
| TAIR|locus:2203206 AT1G77790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 131/336 (38%), Positives = 200/336 (59%)
Query: 16 VVLFLLGL-LMATLDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREAL 74
VV+ LL + + T G CYG GNNLP+ D +ALY NNI +R+Y+P + L
Sbjct: 10 VVIMLLSIQIFCTAGVAGDITGDCYGRNGNNLPTPADTVALYKSNNIDAIRMYEPFADML 69
Query: 75 EALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN 134
EALRGS + V G N D++ +A + A A +V + + N+V K+I +GNE PG+
Sbjct: 70 EALRGSGLLVAFGPRNEDIQSLAHDPAAATNFVSTWITPYQNDVAIKWITIGNEVFPGE- 128
Query: 135 FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194
AQ++ A++N+ A+ +G+ I V+T + AL ++PPS +F D I+ +
Sbjct: 129 IAQFVAAAIKNVNVALTNSGVTG-ISVTTVLAMTALTNTYPPSAATFLPDLTEIMTEITS 187
Query: 195 FLNENRSPLLLNLYPYFAIAGNR-QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYA 253
L+E SPL+ N+YPYFA A + ISLDYA F+S VV DG L Y ++F+A++D A
Sbjct: 188 ILSETNSPLMTNIYPYFAYASDPYHISLDYASFKSNTPVVIDGDLYYNNMFEAMVDGFNA 247
Query: 254 ALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLI----QHVKRGSPKRPGRP 309
ALEK ++ ++++E+GWPT G T+VDNA+ YN + ++ +P+R P
Sbjct: 248 ALEKINAANVVVMVAETGWPTEGNPPH-TSVDNAKAYNMGIRTCGRSAERKRTPRRQNTP 306
Query: 310 IETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQI 345
++ ++FAMF EN K GP +E+ +G+FAP P Y +
Sbjct: 307 VDVFLFAMFKENQKDGP-VEQSFGIFAPDMTPVYDL 341
|
|
| TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 133/340 (39%), Positives = 203/340 (59%)
Query: 16 VVLFLLGLLMATLDTTSA-QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREAL 74
+V ++ ++A L+ A +IG+CYG +NLPS V L NI+ +R+YD N + L
Sbjct: 7 LVFWIFVSILAFLNFGMASKIGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVL 66
Query: 75 EALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG-D 133
+A + IE+M+G+PN DL A Q+ +TW+ NN+ + + K I+VG E D
Sbjct: 67 KAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPD 126
Query: 134 NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLI 193
N ++PAMRNI A+ +GL +IK+S++ L SFPPS SF + + L P++
Sbjct: 127 NATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPML 186
Query: 194 RFLNENRSPLLLNLYPYFAIAGNRQ-ISLDYALFRSQQTVVSDGS-LSYRSLFDAILDAV 251
FL EN SP +++LYPY+A + + + L+YALF S VV + L Y ++FDA LDA+
Sbjct: 187 EFLVENESPFMIDLYPYYAYRDSTEKVPLEYALFESSSQVVDPATGLLYSNMFDAQLDAI 246
Query: 252 YAALEKTGGGSLGIVISESGWPTAGG--DGALTNVDNARTYNNNLIQHV--KRGSPKRPG 307
Y AL ++ ++++ESGWP+ G + A T +NA YN NLI+HV G+P +PG
Sbjct: 247 YFALTAMSFKTVKVMVTESGWPSKGSPKETAATP-ENALAYNTNLIRHVIGDPGTPAKPG 305
Query: 308 RPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347
I+ Y+F++F+EN K G E ER+WG+F Y ++F
Sbjct: 306 EEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDF 345
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P23535 | E13B_PHAVU | 3, ., 2, ., 1, ., 3, 9 | 0.5660 | 0.8936 | 0.8936 | N/A | no |
| Q03467 | E13B_PEA | 3, ., 2, ., 1, ., 3, 9 | 0.5482 | 0.9798 | 0.9216 | N/A | no |
| Q01413 | E13B_SOLLC | 3, ., 2, ., 1, ., 3, 9 | 0.6041 | 0.9396 | 0.9083 | N/A | no |
| Q01412 | E13A_SOLLC | 3, ., 2, ., 1, ., 3, 9 | 0.5076 | 0.8994 | 0.9315 | N/A | no |
| P27666 | E13F_TOBAC | 3, ., 2, ., 1, ., 3, 9 | 0.5930 | 0.9626 | 0.9054 | N/A | no |
| Q03773 | E13A_SOYBN | 3, ., 2, ., 1, ., 3, 9 | 0.6438 | 0.9885 | 0.9913 | yes | no |
| P52408 | E13B_PRUPE | 3, ., 2, ., 1, ., 3, 9 | 0.6830 | 0.9195 | 0.9142 | N/A | no |
| P07979 | GUB_NICPL | 3, ., 2, ., 1, ., 7, 3 | 0.6059 | 0.9396 | 0.8837 | N/A | no |
| P52407 | E13B_HEVBR | 3, ., 2, ., 1, ., 3, 9 | 0.5816 | 0.9425 | 0.8770 | N/A | no |
| P52401 | E132_SOLTU | 3, ., 2, ., 1, ., 3, 9 | 0.5982 | 0.9396 | 0.9008 | N/A | no |
| P52400 | E131_SOLTU | 3, ., 2, ., 1, ., 3, 9 | 0.6025 | 0.8879 | 0.9169 | N/A | no |
| P52402 | E133_SOLTU | 3, ., 2, ., 1, ., 3, 9 | 0.6006 | 0.8620 | 0.9146 | N/A | no |
| P23431 | E13B_NICPL | 3, ., 2, ., 1, ., 3, 9 | 0.5872 | 0.9626 | 0.9178 | N/A | no |
| P15797 | E13B_TOBAC | 3, ., 2, ., 1, ., 3, 9 | 0.5959 | 0.9626 | 0.9029 | N/A | no |
| P49236 | E13B_BRACM | 3, ., 2, ., 1, ., 3, 9 | 0.5501 | 0.9051 | 0.9210 | N/A | no |
| P49237 | E13B_MAIZE | 3, ., 2, ., 1, ., 3, 9 | 0.5063 | 0.8735 | 0.9074 | N/A | no |
| P23546 | E13E_TOBAC | 3, ., 2, ., 1, ., 3, 9 | 0.5930 | 0.9626 | 0.9054 | N/A | no |
| P36401 | E13H_TOBAC | 3, ., 2, ., 1, ., 3, 9 | 0.6501 | 0.9109 | 0.9351 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 348 | |||
| pfam00332 | 310 | pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam | 1e-163 | |
| COG5309 | 305 | COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd | 7e-04 |
| >gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 | Back alignment and domain information |
|---|
Score = 457 bits (1178), Expect = e-163
Identities = 191/314 (60%), Positives = 242/314 (77%), Gaps = 5/314 (1%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYG+ GNNLPS DV++LY NNIRRMR+YDP+ +AL+ALRGS I V+LG+PN+DL
Sbjct: 1 IGVCYGVKGNNLPSPSDVVSLYKSNNIRRMRIYDPDTKALKALRGSGINVILGVPNDDLA 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
+A +Q+ A +WVQ+NVR +A VK +YIAVGNE PG +LVPAMRNI+NA+ AAG
Sbjct: 61 ELAGSQSNAASWVQDNVRPYAPKVKIRYIAVGNEVSPGTT-QSFLVPAMRNIRNALTAAG 119
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIA 214
LGN+IKVST++ LG SFPPS GSF+ + R +DP+I FL +PLL N+YPYFA +
Sbjct: 120 LGNKIKVSTSVRFDILGNSFPPSYGSFRVETRSFMDPIIVFLAGTNAPLLANVYPYFAYS 179
Query: 215 GN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273
N R ISL+YALF+ TVV G L Y++LFDA++DAVYAALEK GG S+ +V+SESGWP
Sbjct: 180 NNPRDISLNYALFQPGTTVVDGG-LGYQNLFDAMVDAVYAALEKAGGPSVEVVVSESGWP 238
Query: 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWG 333
+ GG A ++NARTYN NLI HVK+G+PKRPG IETY+FAMFDEN K G +E+H+G
Sbjct: 239 SDGGFAA--TIENARTYNQNLINHVKKGTPKRPGWAIETYVFAMFDENQKPGESVEKHFG 296
Query: 334 LFAPTRQPRYQINF 347
LF P +QP+Y I+F
Sbjct: 297 LFYPNKQPKYPIDF 310
|
Length = 310 |
| >gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 7e-04
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 260 GGSLGIVISESGWPTAGGD--GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAM 317
G + ++E+GWP+ G A+ +V N + V+ + ++F
Sbjct: 229 GTKKTVWVTETGWPSDGRTYGSAVPSVANQKIA-------VQEILNALRSCGYDVFVFEA 281
Query: 318 FDENGKTGPE--IERHWGLF 335
FD++ K +E++WG+
Sbjct: 282 FDDDWKADGSYGVEKYWGVL 301
|
Length = 305 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 348 | |||
| PF00332 | 310 | Glyco_hydro_17: Glycosyl hydrolases family 17; Int | 100.0 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 100.0 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.21 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.82 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 98.43 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 98.35 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 98.04 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 97.95 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 97.58 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 97.05 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 96.82 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 96.61 | |
| PLN02814 | 504 | beta-glucosidase | 94.99 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 92.95 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 89.52 | |
| PRK09936 | 296 | hypothetical protein; Provisional | 88.89 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 88.05 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 84.97 | |
| cd02874 | 313 | GH18_CFLE_spore_hydrolase Cortical fragment-lytic | 84.05 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 83.39 |
| >PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-83 Score=613.49 Aligned_cols=309 Identities=53% Similarity=0.962 Sum_probs=255.4
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||+.++|+|+++++++++|+++|++||||++|+++|+|++++|++|++||+|+++++++.++..|..|+++||.+|
T Consensus 1 iGvnyG~~~~nlp~p~~vv~l~ks~~i~~vri~d~~~~iL~a~a~S~i~v~v~vpN~~l~~la~~~~~A~~Wv~~nv~~~ 80 (310)
T PF00332_consen 1 IGVNYGRVGNNLPSPCKVVSLLKSNGITKVRIYDADPSILRAFAGSGIEVMVGVPNEDLASLASSQSAAGSWVRTNVLPY 80 (310)
T ss_dssp EEEEE---SSS---HHHHHHHHHHTT--EEEESS--HHHHHHHTTS--EEEEEE-GGGHHHHHHHHHHHHHHHHHHTCTC
T ss_pred CeEeccCccCCCCCHHHHHHHHHhcccccEEeecCcHHHHHHHhcCCceeeeccChHHHHHhccCHHHHhhhhhhccccc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
+|..+|+.|+||||++...... .|+++|+++|++|++.||+++|||+|+++++++..+||||+|.|++++.++|+|+++
T Consensus 81 ~~~~~i~~i~VGnEv~~~~~~~-~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~~~~~~~l~ 159 (310)
T PF00332_consen 81 LPAVNIRYIAVGNEVLTGTDNA-YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIASVMDPLLK 159 (310)
T ss_dssp TTTSEEEEEEEEES-TCCSGGG-GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHHHHHHHHHH
T ss_pred CcccceeeeecccccccCccce-eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccchhhhhHHHH
Confidence 9999999999999999864323 899999999999999999988999999999999999999999999998889999999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccC
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWP 273 (348)
||.++++|+++|+||||.+.++ ..++++||+|++.+... |++++|+|+||+|+|++++||+++|+++++|+|+|||||
T Consensus 160 fL~~t~spf~vN~yPyfa~~~~~~~~~l~yAlf~~~~~~~-D~~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~ETGWP 238 (310)
T PF00332_consen 160 FLDGTNSPFMVNVYPYFAYQNNPQNISLDYALFQPNSGVV-DGGLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGETGWP 238 (310)
T ss_dssp HHHHHT--EEEE--HHHHHHHSTTTS-HHHHTT-SSS-SE-ETTEEESSHHHHHHHHHHHHHHTTT-TT--EEEEEE---
T ss_pred HhhccCCCceeccchhhhccCCcccCCccccccccccccc-ccchhhhHHHHHHHHHHHHHHHHhCCCCceeEEeccccc
Confidence 9999999999999999999998 99999999999876656 889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 274 S~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|+|+.+ ++++||+.|++++++++.+|||+||+.++++||||+|||+||+++++|||||||++||++||+|+|
T Consensus 239 s~G~~~--a~~~nA~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~~f 310 (310)
T PF00332_consen 239 SAGDPG--ATPENAQAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDLDF 310 (310)
T ss_dssp SSSSTT--CSHHHHHHHHHHHHHHCCGBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS----
T ss_pred cCCCCC--CCcchhHHHHHHHHHHHhCCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCCCC
Confidence 999977 999999999999999999999999988999999999999999977799999999999999999987
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D. |
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-49 Score=361.07 Aligned_cols=250 Identities=21% Similarity=0.345 Sum_probs=203.3
Q ss_pred CCCeeeEEecCCCCC--CCCHHHHHH---HHhhCCCCeEEEecCC----hHHHHHHhcCCCEEEEecCCCchhhhhhcHH
Q 018955 31 TSAQIGVCYGMLGNN--LPSKRDVIA---LYNQNNIRRMRLYDPN----REALEALRGSNIEVMLGLPNNDLRRIASNQA 101 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~--~~s~~~v~~---ll~~~~~~~VRlY~~d----~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~ 101 (348)
+-+..||||+|+.++ ||+.+++.. +|++. ...||+|++| .+|++|+...|+||.||||..+.-+- +.+
T Consensus 42 a~g~~~f~l~~~n~dGtCKSa~~~~sDLe~l~~~-t~~IR~Y~sDCn~le~v~pAa~~~g~kv~lGiw~tdd~~~--~~~ 118 (305)
T COG5309 42 ASGFLAFTLGPYNDDGTCKSADQVASDLELLASY-THSIRTYGSDCNTLENVLPAAEASGFKVFLGIWPTDDIHD--AVE 118 (305)
T ss_pred cccccceeccccCCCCCCcCHHHHHhHHHHhccC-CceEEEeeccchhhhhhHHHHHhcCceEEEEEeeccchhh--hHH
Confidence 456889999999865 899999864 55555 3499999988 47889999999999999998653331 222
Q ss_pred HHHHHHHhhccccCCCceEEEEEecccccCCCc-chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcc
Q 018955 102 EANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN-FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGS 180 (348)
Q Consensus 102 ~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~-~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~ 180 (348)
+-+..++++++.++.|++|+||||.|+|++ ++++|+.+|..||.+|+.+|++ .||+|+|+|.++.+.
T Consensus 119 ---~til~ay~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~--gpV~T~dsw~~~~~n------- 186 (305)
T COG5309 119 ---KTILSAYLPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYD--GPVTTVDSWNVVINN------- 186 (305)
T ss_pred ---HHHHHHHhccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCC--CceeecccceeeeCC-------
Confidence 124567888888999999999999999987 8999999999999999999996 599999999988751
Q ss_pred cccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCC
Q 018955 181 FKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGG 260 (348)
Q Consensus 181 f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~ 260 (348)
+. ||++.||+|+|.||||+... ...+.+ .++-.|++-++.+ +|
T Consensus 187 ------p~-------l~~~SDfia~N~~aYwd~~~----------------~a~~~~----~f~~~q~e~vqsa---~g- 229 (305)
T COG5309 187 ------PE-------LCQASDFIAANAHAYWDGQT----------------VANAAG----TFLLEQLERVQSA---CG- 229 (305)
T ss_pred ------hH-------Hhhhhhhhhcccchhccccc----------------hhhhhh----HHHHHHHHHHHHh---cC-
Confidence 22 78999999999999999862 122222 4554566666544 34
Q ss_pred CCccEEEeeeccCCCCC-CC-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCC--CCCCceeeec
Q 018955 261 GSLGIVISESGWPTAGG-DG-ALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGP--EIERHWGLFA 336 (348)
Q Consensus 261 ~~~~v~I~ETGWPS~G~-~~-~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~--~~E~~wGl~~ 336 (348)
.+|+++|+||||||.|. .| .+||++||+.|++++++.++ . .|.++|+||+|||+||..+ ++|+|||++.
T Consensus 230 ~~k~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~~~~~------~-~G~d~fvfeAFdd~WK~~~~y~VEkywGv~~ 302 (305)
T COG5309 230 TKKTVWVTETGWPSDGRTYGSAVPSVANQKIAVQEILNALR------S-CGYDVFVFEAFDDDWKADGSYGVEKYWGVLS 302 (305)
T ss_pred CCccEEEeeccCCCCCCccCCcCCChhHHHHHHHHHHhhhh------c-cCccEEEeeeccccccCccccchhhceeeec
Confidence 45999999999999997 33 37999999999999999884 2 4899999999999999764 5999999999
Q ss_pred CCC
Q 018955 337 PTR 339 (348)
Q Consensus 337 ~d~ 339 (348)
.||
T Consensus 303 s~~ 305 (305)
T COG5309 303 SDR 305 (305)
T ss_pred cCC
Confidence 875
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.7e-09 Score=103.94 Aligned_cols=245 Identities=15% Similarity=0.282 Sum_probs=128.2
Q ss_pred HHHHHHHHhhCCCCeEEEe---cC------C-hHHH---HHHhcCCCEEEEecCCCchhh----------hhh-cHHHHH
Q 018955 49 KRDVIALYNQNNIRRMRLY---DP------N-REAL---EALRGSNIEVMLGLPNNDLRR----------IAS-NQAEAN 104 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY---~~------d-~~vl---~A~~~~glkV~lGv~~~~~~~----------~a~-~~~~a~ 104 (348)
..+++++||..|++.||+= ++ | ..++ +.+++.||+|+|-.--+|-.+ ... +.+++.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRvwv~P~~~g~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~aW~~~~~~~l~ 105 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRVWVNPYDGGYNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAAWANLSFDQLA 105 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-SS-TTTTTTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TTCTSSSHHHHH
T ss_pred CCCHHHHHHhcCCCeEEEEeccCCcccccCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCccCCCCCHHHHH
Confidence 4678999999999888875 11 2 2344 456679999999987654211 111 122222
Q ss_pred ----HHHHhhccccC-CCceEEEEEecccccCC-----C--cchHHHHHHHHHHHHHHHHcCCCCceEEeeeeecccccc
Q 018955 105 ----TWVQNNVRNFA-NNVKFKYIAVGNEAKPG-----D--NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGE 172 (348)
Q Consensus 105 ----~wv~~~v~~~~-~~~~I~~I~VGNE~l~~-----~--~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~ 172 (348)
+..++-+.... -+..++.|.||||.-.. + ...+.+...++...+++++.+- +++|-.-. ..
T Consensus 106 ~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p--~~kV~lH~-----~~ 178 (332)
T PF07745_consen 106 KAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDP--NIKVMLHL-----AN 178 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSS--TSEEEEEE-----S-
T ss_pred HHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCC--CCcEEEEE-----CC
Confidence 12111111110 25678899999996442 1 2577788888888888887544 35554321 11
Q ss_pred ccCCCCcccccCccchhhHHHHHHh---hcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHH
Q 018955 173 SFPPSRGSFKQDYRPILDPLIRFLN---ENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILD 249 (348)
Q Consensus 173 s~pPs~~~f~~d~~~~~~~~l~fL~---~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~d 249 (348)
|.. ....+-..+.|. -.-|+++++.||||... -+.+...++
T Consensus 179 ---~~~-------~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~~--------------------------l~~l~~~l~ 222 (332)
T PF07745_consen 179 ---GGD-------NDLYRWFFDNLKAAGVDFDVIGLSYYPFWHGT--------------------------LEDLKNNLN 222 (332)
T ss_dssp ---TTS-------HHHHHHHHHHHHHTTGG-SEEEEEE-STTST---------------------------HHHHHHHHH
T ss_pred ---CCc-------hHHHHHHHHHHHhcCCCcceEEEecCCCCcch--------------------------HHHHHHHHH
Confidence 000 001111222222 24599999999999862 022233333
Q ss_pred HHHHHHHHhCCCCccEEEeeeccCCCCC-----C----------CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEE
Q 018955 250 AVYAALEKTGGGSLGIVISESGWPTAGG-----D----------GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYI 314 (348)
Q Consensus 250 a~~~a~~~~g~~~~~v~I~ETGWPS~G~-----~----------~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~ 314 (348)
.+. ++. +|+|+|.|||||..-. . +.-+|++.|+.|++.+++.+. ..|. +.+..+||
T Consensus 223 ~l~---~ry---~K~V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~-~~p~--~~g~GvfY 293 (332)
T PF07745_consen 223 DLA---SRY---GKPVMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVK-NVPN--GGGLGVFY 293 (332)
T ss_dssp HHH---HHH---T-EEEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHH-TS----TTEEEEEE
T ss_pred HHH---HHh---CCeeEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHH-Hhcc--CCeEEEEe
Confidence 332 333 4799999999999821 0 113689999999999999885 2222 24788888
Q ss_pred EE-eecCCC-----CCCCCCCCceeeecCCCCeeeecc
Q 018955 315 FA-MFDENG-----KTGPEIERHWGLFAPTRQPRYQIN 346 (348)
Q Consensus 315 F~-~fDe~w-----K~~~~~E~~wGl~~~d~~~ky~l~ 346 (348)
-| ..-..+ ..|..+|.. +||+.+|++--+|+
T Consensus 294 WeP~w~~~~~~~~~~~g~~w~n~-~lFD~~g~~l~sl~ 330 (332)
T PF07745_consen 294 WEPAWIPVENGWDWGGGSSWDNQ-ALFDFNGNALPSLD 330 (332)
T ss_dssp E-TT-GGGTTHHHHTTTSSSSBG-SSB-TTSBB-GGGG
T ss_pred eccccccCCcccccCCCCCcccc-ccCCCCCCCchHhh
Confidence 87 222221 122345555 99999999876664
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-07 Score=90.49 Aligned_cols=193 Identities=24% Similarity=0.314 Sum_probs=101.0
Q ss_pred eeeEEecCCCCC--------CCC---HHHHHHHHhhCCCCeEEEecCCh-----HHHHHHhcCCCEEEEecCCCchhhhh
Q 018955 34 QIGVCYGMLGNN--------LPS---KRDVIALYNQNNIRRMRLYDPNR-----EALEALRGSNIEVMLGLPNNDLRRIA 97 (348)
Q Consensus 34 ~~Gi~Y~~~~~~--------~~s---~~~v~~ll~~~~~~~VRlY~~d~-----~vl~A~~~~glkV~lGv~~~~~~~~a 97 (348)
..||.|-|-.+. +-. ..+++.+||+.|++.||+|+.|+ .-..+|+..||-|++.+.... .++.
T Consensus 29 ikGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY~vdp~~nHd~CM~~~~~aGIYvi~Dl~~p~-~sI~ 107 (314)
T PF03198_consen 29 IKGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVYSVDPSKNHDECMSAFADAGIYVILDLNTPN-GSIN 107 (314)
T ss_dssp EEEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES---TTS--HHHHHHHHHTT-EEEEES-BTT-BS--
T ss_pred EeeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEEEeCCCCCHHHHHHHHHhCCCEEEEecCCCC-cccc
Confidence 469999988652 111 13467899999999999998873 467889999999999998652 1111
Q ss_pred h-cH------HHHHHHHHhhccccCCCceEEEEEecccccCCCc---chHHHHHHHHHHHHHHHHcCCCCceEEeeeeec
Q 018955 98 S-NQ------AEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN---FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIET 167 (348)
Q Consensus 98 ~-~~------~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~---~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~ 167 (348)
+ ++ ....+ ..+-|..+..=+++-+..+|||++.... .++.+-.+++.+|+-+++.++. .|||+-+-+-
T Consensus 108 r~~P~~sw~~~l~~~-~~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R-~IPVGYsaaD 185 (314)
T PF03198_consen 108 RSDPAPSWNTDLLDR-YFAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYR-SIPVGYSAAD 185 (314)
T ss_dssp TTS------HHHHHH-HHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EEEEE--
T ss_pred CCCCcCCCCHHHHHH-HHHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCC-CCceeEEccC
Confidence 1 11 11222 2233444433368999999999998642 5888999999999999999986 4999966421
Q ss_pred cccccccCCCCcccccCccchhhHHHHHHh-----hcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhh
Q 018955 168 GALGESFPPSRGSFKQDYRPILDPLIRFLN-----ENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRS 242 (348)
Q Consensus 168 ~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~-----~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n 242 (348)
. .....++.++|. +..|++++|.|-+=.. ..|+. . .|..
T Consensus 186 ~-----------------~~~r~~~a~Yl~Cg~~~~~iDf~g~N~Y~WCg~----------Stf~~-------S--Gy~~ 229 (314)
T PF03198_consen 186 D-----------------AEIRQDLANYLNCGDDDERIDFFGLNSYEWCGD----------STFET-------S--GYDR 229 (314)
T ss_dssp ------------------TTTHHHHHHHTTBTT-----S-EEEEE----SS------------HHH-------H--SHHH
T ss_pred C-----------------hhHHHHHHHHhcCCCcccccceeeeccceecCC----------Ccccc-------c--cHHH
Confidence 1 112234556665 3669999999875321 12221 1 2333
Q ss_pred HHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCC
Q 018955 243 LFDAILDAVYAALEKTGGGSLGIVISESGWPTAG 276 (348)
Q Consensus 243 ~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G 276 (348)
+.+ .. .++ .+||..+|.|.-+..
T Consensus 230 l~~--------~f--~~y-~vPvffSEyGCn~~~ 252 (314)
T PF03198_consen 230 LTK--------EF--SNY-SVPVFFSEYGCNTVT 252 (314)
T ss_dssp HHH--------HH--TT--SS-EEEEEE---SSS
T ss_pred HHH--------Hh--hCC-CCCeEEcccCCCCCC
Confidence 321 11 233 589999999997554
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=1e-05 Score=76.86 Aligned_cols=245 Identities=19% Similarity=0.350 Sum_probs=134.8
Q ss_pred HHHHHHHHhhCCCCeEEEe------cCC--------h---HHH---HHHhcCCCEEEEecCCCchhhhhhcHHHHHHHH-
Q 018955 49 KRDVIALYNQNNIRRMRLY------DPN--------R---EAL---EALRGSNIEVMLGLPNNDLRRIASNQAEANTWV- 107 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY------~~d--------~---~vl---~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv- 107 (348)
..+.+++||..|+++||+- ++| . .++ +.+++.||||++-.-.+|-.+=..-+..-+.|.
T Consensus 65 ~qD~~~iLK~~GvNyvRlRvwndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~kPkaW~~ 144 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRVWNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQKKPKAWEN 144 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEEecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcCCcHHhhh
Confidence 4667899999999988874 333 1 233 345678999999987665322000011111221
Q ss_pred ------Hhhcccc--------C-CCceEEEEEecccccCC-----Cc--chHHHHHHHHHHHHHHHHcCCCCceEEeeee
Q 018955 108 ------QNNVRNF--------A-NNVKFKYIAVGNEAKPG-----DN--FAQYLVPAMRNIQNAINAAGLGNQIKVSTAI 165 (348)
Q Consensus 108 ------~~~v~~~--------~-~~~~I~~I~VGNE~l~~-----~~--~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~ 165 (348)
++.|-.| . -+..+..|-||||.-.. ++ ....+...++.--.+++.. +.+|+|---
T Consensus 145 l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev--~p~ikv~lH- 221 (403)
T COG3867 145 LNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREV--SPTIKVALH- 221 (403)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhhc--CCCceEEEE-
Confidence 1111111 0 24567889999997532 22 2344444444444444442 335776543
Q ss_pred eccccccccCCCCcccccCccchhhHHHHHHhh---cCCcccccccccccccCCCCCCccccccccCCceeccCCcchhh
Q 018955 166 ETGALGESFPPSRGSFKQDYRPILDPLIRFLNE---NRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRS 242 (348)
Q Consensus 166 ~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~---~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n 242 (348)
+.+.-.+| .|+ -+.+.|.+ .-|+++.--||||.+.= . |
T Consensus 222 ----la~g~~n~--~y~--------~~fd~ltk~nvdfDVig~SyYpyWhgtl------------------~-------n 262 (403)
T COG3867 222 ----LAEGENNS--LYR--------WIFDELTKRNVDFDVIGSSYYPYWHGTL------------------N-------N 262 (403)
T ss_pred ----ecCCCCCc--hhh--------HHHHHHHHcCCCceEEeeeccccccCcH------------------H-------H
Confidence 22222221 222 12222333 34889999999999741 1 1
Q ss_pred HHHHHHHHHHHHHHHhCCCCccEEEeeecc--------------CCCCCC-CCCCCHHHHHHHHHHHHHHHHhcCCCCCC
Q 018955 243 LFDAILDAVYAALEKTGGGSLGIVISESGW--------------PTAGGD-GALTNVDNARTYNNNLIQHVKRGSPKRPG 307 (348)
Q Consensus 243 ~~da~~da~~~a~~~~g~~~~~v~I~ETGW--------------PS~G~~-~~vas~~na~~y~~~~~~~~~~gtp~~~~ 307 (348)
+...++.+.. . =+|+|+|.||+. |+.+.. +.-.+++.|.+|.+.+++.+. -.|..
T Consensus 263 -L~~nl~dia~---r---Y~K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~-nvp~~-- 332 (403)
T COG3867 263 -LTTNLNDIAS---R---YHKDVMVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVK-NVPKS-- 332 (403)
T ss_pred -HHhHHHHHHH---H---hcCeEEEEEecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHH-hCCCC--
Confidence 1111222211 1 257999999998 666542 224788999999999999885 22222
Q ss_pred CCccEEEEE-e-----e-------------cCCCCCCCCCCCceeeecCCCCeeeecc
Q 018955 308 RPIETYIFA-M-----F-------------DENGKTGPEIERHWGLFAPTRQPRYQIN 346 (348)
Q Consensus 308 ~~~~~f~F~-~-----f-------------De~wK~~~~~E~~wGl~~~d~~~ky~l~ 346 (348)
.|..+||.| + . .|+|+.+..++.. -||+.+|.|-.+|+
T Consensus 333 ~GlGvFYWEp~wipv~~g~gwat~~~~~y~~e~w~~gsavdNq-aLfdf~G~~LPSl~ 389 (403)
T COG3867 333 NGLGVFYWEPAWIPVVLGSGWATSYAAKYDPENWGEGSAVDNQ-ALFDFNGHPLPSLN 389 (403)
T ss_pred CceEEEEecccceeccCCCccccchhhccCcccccCCCccchh-hhhhccCCcCcchh
Confidence 367777776 1 1 2344443223333 58888888876654
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00012 Score=77.16 Aligned_cols=239 Identities=15% Similarity=0.107 Sum_probs=133.5
Q ss_pred HHHHHhhCCCCeEEEe--cCChHHHHHHhcCCCEEEEecCCC---------------chhhhh------hcHHHHHHHHH
Q 018955 52 VIALYNQNNIRRMRLY--DPNREALEALRGSNIEVMLGLPNN---------------DLRRIA------SNQAEANTWVQ 108 (348)
Q Consensus 52 v~~ll~~~~~~~VRlY--~~d~~vl~A~~~~glkV~lGv~~~---------------~~~~~a------~~~~~a~~wv~ 108 (348)
.++++|..|++.||+- -.++..+.+|-..||-|+.=++.- +.+... +..+...+-++
T Consensus 318 d~~l~K~~G~N~vR~sh~p~~~~~~~~cD~~GllV~~E~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (604)
T PRK10150 318 DHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVGLNLSFGAGLEAGNKPKETYSEEAVNGETQQAHLQAIR 397 (604)
T ss_pred HHHHHHHCCCCEEEeccCCCCHHHHHHHHhcCcEEEEecccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 4678999999999993 235789999999999988544210 000000 01112222244
Q ss_pred hhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccch
Q 018955 109 NNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPI 188 (348)
Q Consensus 109 ~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~ 188 (348)
+.|..+..--.|..=++|||.-...+. ....++.+.+.+++.. +.=+|+.+..+. . +|. . ..
T Consensus 398 ~mv~r~~NHPSIi~Ws~gNE~~~~~~~---~~~~~~~l~~~~k~~D--ptR~vt~~~~~~---~--~~~-----~---~~ 459 (604)
T PRK10150 398 ELIARDKNHPSVVMWSIANEPASREQG---AREYFAPLAELTRKLD--PTRPVTCVNVMF---A--TPD-----T---DT 459 (604)
T ss_pred HHHHhccCCceEEEEeeccCCCccchh---HHHHHHHHHHHHHhhC--CCCceEEEeccc---C--Ccc-----c---cc
Confidence 455555433457799999997533222 2233344444444433 234677654211 0 010 0 00
Q ss_pred hhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEe
Q 018955 189 LDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVIS 268 (348)
Q Consensus 189 ~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ 268 (348)
+.+..|+++.|.|+=|-.... + .. .....++..++.. .++ + +||++++
T Consensus 460 -------~~~~~Dv~~~N~Y~~wy~~~~-~--------------~~----~~~~~~~~~~~~~---~~~--~-~kP~~is 507 (604)
T PRK10150 460 -------VSDLVDVLCLNRYYGWYVDSG-D--------------LE----TAEKVLEKELLAW---QEK--L-HKPIIIT 507 (604)
T ss_pred -------ccCcccEEEEcccceecCCCC-C--------------HH----HHHHHHHHHHHHH---HHh--c-CCCEEEE
Confidence 233459999999863321100 0 00 0012222222211 111 2 7899999
Q ss_pred eeccCCCCC----CCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCC--CCCCceeeecCCCCee
Q 018955 269 ESGWPTAGG----DGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGP--EIERHWGLFAPTRQPR 342 (348)
Q Consensus 269 ETGWPS~G~----~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~--~~E~~wGl~~~d~~~k 342 (348)
|.|+.+.-+ ....-|.+.|..|++...+.++ .+|. -...|+-.+||-.+..+. .-..+.||++.||+||
T Consensus 508 Eyg~~~~~~~h~~~~~~~~ee~q~~~~~~~~~~~~----~~p~-~~G~~iW~~~D~~~~~g~~~~~g~~~Gl~~~dr~~k 582 (604)
T PRK10150 508 EYGADTLAGLHSMYDDMWSEEYQCAFLDMYHRVFD----RVPA-VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPK 582 (604)
T ss_pred ccCCccccccccCCCCCCCHHHHHHHHHHHHHHHh----cCCc-eEEEEEEeeeccCCCCCCcccCCCcceeEcCCCCCh
Confidence 999876322 1113578889999888877765 2453 567889999996554321 1235789999999999
Q ss_pred eec
Q 018955 343 YQI 345 (348)
Q Consensus 343 y~l 345 (348)
-..
T Consensus 583 ~~~ 585 (604)
T PRK10150 583 SAA 585 (604)
T ss_pred HHH
Confidence 654
|
|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00029 Score=65.78 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=77.8
Q ss_pred eeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecC-------------C-------hHHHHHHhcCCCEEEEecCCCc-
Q 018955 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDP-------------N-------REALEALRGSNIEVMLGLPNND- 92 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~-------------d-------~~vl~A~~~~glkV~lGv~~~~- 92 (348)
..|+|-. +.... ..+++++.+++.|++.||+.-. + ..+|+++++.||+|+|.+....
T Consensus 10 ~~G~n~~-w~~~~-~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~~~ 87 (281)
T PF00150_consen 10 WRGFNTH-WYNPS-ITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNAPG 87 (281)
T ss_dssp EEEEEET-TSGGG-SHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEESTT
T ss_pred eeeeecc-cCCCC-CHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccCcc
Confidence 4566655 22111 6788899999999999999711 1 2578888999999999887630
Q ss_pred ---hhhhhhcHHHHHHHHHh---hccccC-CCceEEEEEecccccCCCc-------chHHHHHHHHHHHHHHHHcCCCC
Q 018955 93 ---LRRIASNQAEANTWVQN---NVRNFA-NNVKFKYIAVGNEAKPGDN-------FAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 93 ---~~~~a~~~~~a~~wv~~---~v~~~~-~~~~I~~I~VGNE~l~~~~-------~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
............+|+++ .+...| ....|.++-+.||+..... ....+.+.++.+-+++++.+-..
T Consensus 88 w~~~~~~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~ 166 (281)
T PF00150_consen 88 WANGGDGYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNH 166 (281)
T ss_dssp CSSSTSTTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSS
T ss_pred ccccccccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcc
Confidence 00001111122222222 233322 3445779999999988532 34778899999999999998653
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00082 Score=63.22 Aligned_cols=212 Identities=15% Similarity=0.078 Sum_probs=114.1
Q ss_pred HHHHHHhcCCCEEEE--ecCCCchhhhhh------cHHHHHHHHHhhccccCCCceEEEEEecccccCCCc------chH
Q 018955 72 EALEALRGSNIEVML--GLPNNDLRRIAS------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN------FAQ 137 (348)
Q Consensus 72 ~vl~A~~~~glkV~l--Gv~~~~~~~~a~------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~------~~~ 137 (348)
.+++.+++.||+|-- -+|....+.... ..+...+++++.+..| ...|...-|.||++..+. ...
T Consensus 20 ~~~~~a~~~gi~v~gH~l~W~~~~P~W~~~~~~~~~~~~~~~~i~~v~~ry--~g~i~~wdV~NE~~~~~~~~~~~~~w~ 97 (254)
T smart00633 20 AIVNFAKENGIKVRGHTLVWHSQTPDWVFNLSKETLLARLENHIKTVVGRY--KGKIYAWDVVNEALHDNGSGLRRSVWY 97 (254)
T ss_pred HHHHHHHHCCCEEEEEEEeecccCCHhhhcCCHHHHHHHHHHHHHHHHHHh--CCcceEEEEeeecccCCCcccccchHH
Confidence 466777788888632 256554444332 1345566676666666 356999999999986431 121
Q ss_pred HHH--HHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCccccccccccc
Q 018955 138 YLV--PAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFA 212 (348)
Q Consensus 138 ~Ll--~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~ 212 (348)
..+ .+|+..-+..++.. +++++-.-+ +++.. ++. + ...+..+++.|.+. .|-+++..|-+.+
T Consensus 98 ~~~G~~~i~~af~~ar~~~--P~a~l~~Nd-y~~~~---~~~----k---~~~~~~~v~~l~~~g~~iDgiGlQ~H~~~~ 164 (254)
T smart00633 98 QILGEDYIEKAFRYAREAD--PDAKLFYND-YNTEE---PNA----K---RQAIYELVKKLKAKGVPIDGIGLQSHLSLG 164 (254)
T ss_pred HhcChHHHHHHHHHHHHhC--CCCEEEEec-cCCcC---ccH----H---HHHHHHHHHHHHHCCCccceeeeeeeecCC
Confidence 222 34444444444433 235554432 11111 100 0 11234455555443 3444444332110
Q ss_pred ccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHH
Q 018955 213 IAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNN 292 (348)
Q Consensus 213 ~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~ 292 (348)
. . + .+.+...|++++-.++||+|||.+-|.. ++++.|+.+++
T Consensus 165 ~----------------------~-----~-----~~~~~~~l~~~~~~g~pi~iTE~dv~~~------~~~~~qA~~~~ 206 (254)
T smart00633 165 S----------------------P-----N-----IAEIRAALDRFASLGLEIQITELDISGY------PNPQAQAADYE 206 (254)
T ss_pred C----------------------C-----C-----HHHHHHHHHHHHHcCCceEEEEeecCCC------CcHHHHHHHHH
Confidence 0 0 1 1122333343333478999999999864 34588899999
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEEeecC-CCCCCCCCCCceeeecCCCCeeeec
Q 018955 293 NLIQHVKRGSPKRPGRPIETYIFAMFDE-NGKTGPEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 293 ~~~~~~~~gtp~~~~~~~~~f~F~~fDe-~wK~~~~~E~~wGl~~~d~~~ky~l 345 (348)
.+++.+.+ .|. ...+++....|. .|.+ +.+-|||+.|+++|-.+
T Consensus 207 ~~l~~~~~----~p~-v~gi~~Wg~~d~~~W~~----~~~~~L~d~~~~~kpa~ 251 (254)
T smart00633 207 EVFKACLA----HPA-VTGVTVWGVTDKYSWLD----GGAPLLFDANYQPKPAY 251 (254)
T ss_pred HHHHHHHc----CCC-eeEEEEeCCccCCcccC----CCCceeECCCCCCChhh
Confidence 99888752 232 344555555553 4443 24679999999999754
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0031 Score=58.95 Aligned_cols=164 Identities=13% Similarity=0.126 Sum_probs=98.3
Q ss_pred ceEEEEEecccccCCCc---chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 118 VKFKYIAVGNEAKPGDN---FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 118 ~~I~~I~VGNE~l~~~~---~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
..++.|..=||+=...+ ++++.+...++..+.|+.. .+++..+-.-. ....+|+ -.+.++..++
T Consensus 64 ~~~~~ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~~----~~~l~sPa~~~--~~~~~~~-------g~~Wl~~F~~ 130 (239)
T PF11790_consen 64 PGSKHLLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRSP----GVKLGSPAVAF--TNGGTPG-------GLDWLSQFLS 130 (239)
T ss_pred cCccceeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhcC----CcEEECCeecc--cCCCCCC-------ccHHHHHHHH
Confidence 46888999999876542 6888888888877777743 47777665210 0000011 1234444444
Q ss_pred HHh--hcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeecc
Q 018955 195 FLN--ENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGW 272 (348)
Q Consensus 195 fL~--~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGW 272 (348)
-.. ...|++.+|.| ... . .-|...++.++ ++.| |||+|||.|+
T Consensus 131 ~~~~~~~~D~iavH~Y---~~~------------------~--------~~~~~~i~~~~---~~~~---kPIWITEf~~ 175 (239)
T PF11790_consen 131 ACARGCRVDFIAVHWY---GGD------------------A--------DDFKDYIDDLH---NRYG---KPIWITEFGC 175 (239)
T ss_pred hcccCCCccEEEEecC---CcC------------------H--------HHHHHHHHHHH---HHhC---CCEEEEeecc
Confidence 221 26788887777 110 0 12223344333 3433 7999999998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCe
Q 018955 273 PTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQP 341 (348)
Q Consensus 273 PS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ 341 (348)
.. +... .+.++++.|.+..+.++++ ++. --.++||...+ .+. .....-.|++.+|++
T Consensus 176 ~~-~~~~--~~~~~~~~fl~~~~~~ld~----~~~-VeryawF~~~~-~~~---~~~~~~~L~~~~G~l 232 (239)
T PF11790_consen 176 WN-GGSQ--GSDEQQASFLRQALPWLDS----QPY-VERYAWFGFMN-DGS---GVNPNSALLDADGSL 232 (239)
T ss_pred cC-CCCC--CCHHHHHHHHHHHHHHHhc----CCC-eeEEEeccccc-ccC---CCccccccccCCCCc
Confidence 87 2223 7889999999999999861 222 34688888333 222 245556777777754
|
|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.14 Score=52.02 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=35.3
Q ss_pred HHHHHHHhhCCCCeEEEec------------CC-------hHHHHHHhcCCCEEEEecCCCchh
Q 018955 50 RDVIALYNQNNIRRMRLYD------------PN-------REALEALRGSNIEVMLGLPNNDLR 94 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~------------~d-------~~vl~A~~~~glkV~lGv~~~~~~ 94 (348)
+++++++++.|++++|+=- .+ .++|..+.+.||++++.+..-+++
T Consensus 57 ~eDi~l~~~~G~~~~R~si~Wsri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hfd~P 120 (427)
T TIGR03356 57 EEDVALMKELGVDAYRFSIAWPRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHWDLP 120 (427)
T ss_pred HHHHHHHHHcCCCeEEcccchhhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccCCcc
Confidence 6788999999999998631 12 368899999999999999664444
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0038 Score=63.71 Aligned_cols=280 Identities=19% Similarity=0.245 Sum_probs=132.3
Q ss_pred HHHHHHHhhCCCCeEEEecC-------------C-------hHHHHHHhcCCCEEEEecCCCchhhhhh------cHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP-------------N-------REALEALRGSNIEVMLGLPNNDLRRIAS------NQAEA 103 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~-------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~------~~~~a 103 (348)
+++++|+++.|++..|+==. | .++|..+...||+.++.+..-++|..-. +++.+
T Consensus 61 ~eDi~l~~~lg~~~yRfsi~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~~~P~~l~~~ggw~~~~~~ 140 (455)
T PF00232_consen 61 KEDIALMKELGVNAYRFSISWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHFDLPLWLEDYGGWLNRETV 140 (455)
T ss_dssp HHHHHHHHHHT-SEEEEE--HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS--BHHHHHHTGGGSTHHH
T ss_pred hHHHHHHHhhccceeeeecchhheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeecccccceeecccccCHHHH
Confidence 67899999999999987511 2 3689999999999999999866654221 11211
Q ss_pred HHHHHhh----ccccCCCceEEEEEecccccCC-------C------c-------chHHHHHHHHHHHHHHHHcCCCCce
Q 018955 104 NTWVQNN----VRNFANNVKFKYIAVGNEAKPG-------D------N-------FAQYLVPAMRNIQNAINAAGLGNQI 159 (348)
Q Consensus 104 ~~wv~~~----v~~~~~~~~I~~I~VGNE~l~~-------~------~-------~~~~Ll~~i~~v~~~L~~~gl~~~I 159 (348)
++..+- +..+ ++.|+.-+.=||+..- + . ....++.+-..+.++++..+- +.
T Consensus 141 -~~F~~Ya~~~~~~~--gd~V~~w~T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AHa~A~~~~~~~~~--~~ 215 (455)
T PF00232_consen 141 -DWFARYAEFVFERF--GDRVKYWITFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAHAKAVKAIKEKYP--DG 215 (455)
T ss_dssp -HHHHHHHHHHHHHH--TTTBSEEEEEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHHHHHHHHHHHHTC--TS
T ss_pred -HHHHHHHHHHHHHh--CCCcceEEeccccceeeccccccccccccccccchhhHHHhhHHHHHHHHHHHHhhccc--ce
Confidence 122211 2233 4678888888886531 1 0 122244444445555666553 35
Q ss_pred EEeeeeecccccc--ccCCCC---c----c----------cccCccchhhH--------------HHHHHhhcCCccccc
Q 018955 160 KVSTAIETGALGE--SFPPSR---G----S----------FKQDYRPILDP--------------LIRFLNENRSPLLLN 206 (348)
Q Consensus 160 ~VsT~~~~~~~~~--s~pPs~---~----~----------f~~d~~~~~~~--------------~l~fL~~~~d~~~vN 206 (348)
+|+.+.+.....- ..++.. + . +..++...|+. -++.|....||+++|
T Consensus 216 ~IGi~~~~~~~~P~~~~~~d~~~Aa~~~~~~~n~~f~dpi~~G~YP~~~~~~~~~~~~lp~ft~ed~~~ikg~~DFlGiN 295 (455)
T PF00232_consen 216 KIGIALNFSPFYPLSPSPEDDVAAAERADEFHNGWFLDPIFKGDYPEEMKEYLGERGILPEFTEEDKELIKGSIDFLGIN 295 (455)
T ss_dssp EEEEEEEEEEEEESSSSHHHHHHHHHHHHHHHTHHHHHHHHHSSSEHHHHHHHGGGTSSTTSGHHHHHHHTTTTSEEEEE
T ss_pred EEeccccccccCCCCccchhhHHHHHHHHHHhhcccccCchhhcCChHHhhccccccccccccchhhhcccccchhhhhc
Confidence 7777665433210 000110 0 0 01111111111 223345679999999
Q ss_pred ccccccccCCC--CCCcccc---cccc---CCceeccCCcc-hhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC
Q 018955 207 LYPYFAIAGNR--QISLDYA---LFRS---QQTVVSDGSLS-YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG 277 (348)
Q Consensus 207 ~yPff~~~~~~--~i~~~~a---~f~~---~~~~~~d~~~~-y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~ 277 (348)
-|.=---...+ ..+..+. .+.. +.....+.+.. |..-+-.++.-++ + -++++||+|+|.|++....
T Consensus 296 YYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L~~l~---~--~Y~~~pI~ITENG~~~~~~ 370 (455)
T PF00232_consen 296 YYTSRYVRADPNPSSPPSYDSDAPFGQPYNPGGPTTDWGWEIYPEGLRDVLRYLK---D--RYGNPPIYITENGIGDPDE 370 (455)
T ss_dssp ESEEEEEEESSSSTSSTTHEEEESEEEECETSSEBCTTSTBBETHHHHHHHHHHH---H--HHTSSEEEEEEE---EETT
T ss_pred cccceeeccCccccccccccCCccccccccccccccccCcccccchHhhhhhhhc---c--ccCCCcEEEeccccccccc
Confidence 88632222211 1111111 0100 00011222221 1111111121111 2 2567999999999987764
Q ss_pred C--CCC---CCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC------CCeeeec
Q 018955 278 D--GAL---TNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT------RQPRYQI 345 (348)
Q Consensus 278 ~--~~v---as~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d------~~~ky~l 345 (348)
. +.+ .-..--+.++..+.+.++.|.+. ..+|..++.|- +--..+..+.|||++-| |+||-+.
T Consensus 371 ~~~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V-----~GY~~WSl~Dn-~Ew~~Gy~~rfGl~~VD~~~~~~R~pK~S~ 443 (455)
T PF00232_consen 371 VDDGKVDDDYRIDYLQDHLNQVLKAIEDGVNV-----RGYFAWSLLDN-FEWAEGYKKRFGLVYVDFFDTLKRTPKKSA 443 (455)
T ss_dssp CTTSHBSHHHHHHHHHHHHHHHHHHHHTT-EE-----EEEEEETSB----BGGGGGGSE--SEEEETTTTTEEEEBHHH
T ss_pred ccccCcCcHHHHHHHHHHHHHHHhhhccCCCe-----eeEeeeccccc-cccccCccCccCceEEcCCCCcCeeeccHH
Confidence 2 100 11222344445555555445443 24777777773 33223589999999999 8887654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.14 Score=49.11 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=54.5
Q ss_pred eeeEEecCCCCC---CCCHHH---HHHHHhhCCCCeEEEec--CChHHHHHHhcCCCEEEEecCCCch--hh-h------
Q 018955 34 QIGVCYGMLGNN---LPSKRD---VIALYNQNNIRRMRLYD--PNREALEALRGSNIEVMLGLPNNDL--RR-I------ 96 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~~---v~~ll~~~~~~~VRlY~--~d~~vl~A~~~~glkV~lGv~~~~~--~~-~------ 96 (348)
..|+|+...... .++.++ .++++|+.|++.||+.. .++..+..|...||-|+..++.... .. .
T Consensus 17 l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~~~~~~~~~~~~~~~~ 96 (298)
T PF02836_consen 17 LRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPPSPRFYDLCDELGILVWQEIPLEGHGSWQDFGNCNYD 96 (298)
T ss_dssp EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-BSCTSSSSTSCTSCT
T ss_pred EEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccccCcHHHHHHHhhcCCEEEEeccccccCccccCCccccC
Confidence 469998876433 244443 45688999999999963 3578999999999999987765110 00 0
Q ss_pred ---hhcHHHHHHHHHhhccccCCCceEEEEEecccc
Q 018955 97 ---ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEA 129 (348)
Q Consensus 97 ---a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~ 129 (348)
....+.+.+-+++.|..+..--.|..=.+|||.
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~ 132 (298)
T PF02836_consen 97 ADDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES 132 (298)
T ss_dssp TTSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC
Confidence 011122333344555554332347788899999
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=94.99 E-value=4.9 Score=41.81 Aligned_cols=46 Identities=22% Similarity=0.365 Sum_probs=36.6
Q ss_pred HHHHHHHhhCCCCeEEEe---------c---CC-------hHHHHHHhcCCCEEEEecCCCchhh
Q 018955 50 RDVIALYNQNNIRRMRLY---------D---PN-------REALEALRGSNIEVMLGLPNNDLRR 95 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY---------~---~d-------~~vl~A~~~~glkV~lGv~~~~~~~ 95 (348)
+|+++|+|+.|++.-|+= + .+ .+++.++.+.||+-++.+..-++|.
T Consensus 80 ~EDI~L~k~lG~~ayRfSIsWsRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP~ 144 (504)
T PLN02814 80 KEDVKLMAEMGLESFRFSISWSRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQ 144 (504)
T ss_pred HHHHHHHHHcCCCEEEEeccHhhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCH
Confidence 678999999998877753 1 12 3799999999999999999877664
|
|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=92.95 E-value=5.7 Score=44.93 Aligned_cols=98 Identities=17% Similarity=0.099 Sum_probs=57.3
Q ss_pred eeeEEecCCCC---CCCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCc--------hhhhh
Q 018955 34 QIGVCYGMLGN---NLPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNND--------LRRIA 97 (348)
Q Consensus 34 ~~Gi~Y~~~~~---~~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~--------~~~~a 97 (348)
..|+|+-.... ...+.++ .++++|+.|++.||+-.- ++..+..|-..||-|+--+.... ...+.
T Consensus 336 lrGvnrh~~~p~~G~a~~~e~~~~dl~lmK~~g~NavR~sHyP~~~~fydlcDe~GllV~dE~~~e~~g~~~~~~~~~~~ 415 (1021)
T PRK10340 336 LHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRIT 415 (1021)
T ss_pred EEEeecCCCCcccCccCCHHHHHHHHHHHHHCCCCEEEecCCCCCHHHHHHHHHCCCEEEECCcccccCccccccccccc
Confidence 45777654321 1234443 467899999999998532 46789999999999987542210 00011
Q ss_pred hcH---HHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 98 SNQ---AEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 98 ~~~---~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
.++ ++..+-+++.|.++..--.|..=++|||.-.
T Consensus 416 ~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~ 452 (1021)
T PRK10340 416 DDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGY 452 (1021)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCccc
Confidence 111 1112224445555433345778889999854
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=89.52 E-value=2.9 Score=41.38 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=55.8
Q ss_pred EecCCCCCCCCHHHHHHHHhhCCCCeEEEecC------------C----hHHHHHHhcCCCEEEEecCCCchhhhh----
Q 018955 38 CYGMLGNNLPSKRDVIALYNQNNIRRMRLYDP------------N----REALEALRGSNIEVMLGLPNNDLRRIA---- 97 (348)
Q Consensus 38 ~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~------------d----~~vl~A~~~~glkV~lGv~~~~~~~~a---- 97 (348)
||-|-.-....-++++++++..|++.|||-.. | ..+|..+++.||+|+|+++....+..-
T Consensus 1 dy~pe~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 1 DYYPEQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp E--GGGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCS
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecHHHHHHHHHHHhccCeEEEEecccccccchhhhc
Confidence 34444322233467889999999999997422 1 368888999999999999743211110
Q ss_pred --------------------------hcHHHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 98 --------------------------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 98 --------------------------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
.-++.+.+.+.+-+..|.....|.++.|+||.-.
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~ 140 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGY 140 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTC
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCc
Confidence 0123344444444445544456999999999766
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PRK09936 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.89 E-value=13 Score=35.88 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=68.7
Q ss_pred CeeeEEecCCCCC-CCCHHH---HHHHHhhCCCCeEEEe-----cCC--------hHHHHHHhcCCCEEEEecCCCch--
Q 018955 33 AQIGVCYGMLGNN-LPSKRD---VIALYNQNNIRRMRLY-----DPN--------REALEALRGSNIEVMLGLPNNDL-- 93 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~-~~s~~~---v~~ll~~~~~~~VRlY-----~~d--------~~vl~A~~~~glkV~lGv~~~~~-- 93 (348)
...|+=|-|+..+ --++++ ..+.++..|++.+=+- +.| .+.++++...||+|.+|++.|..
T Consensus 20 a~~g~F~Qp~n~d~~~~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~~~g~La~~l~~A~~~Gl~v~vGL~~Dp~y~ 99 (296)
T PRK09936 20 AMKGIFYQPQNRDSQVTDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGGQRGWLAKRLAAAQQAGLKLVVGLYADPEFF 99 (296)
T ss_pred ccccceeccccccCCCCHHHHHHHHHHHHHcCCcEEEEEeeeccCCCcccchHHHHHHHHHHHHcCCEEEEcccCChHHH
Confidence 3456679999766 456654 5666777888776542 222 47888889999999999998741
Q ss_pred hhhhhcHHHHHHHHHhhcccc---------CCCceEEEEEeccccc-CCCc---chHHHHHHHHHHHHHHH
Q 018955 94 RRIASNQAEANTWVQNNVRNF---------ANNVKFKYIAVGNEAK-PGDN---FAQYLVPAMRNIQNAIN 151 (348)
Q Consensus 94 ~~~a~~~~~a~~wv~~~v~~~---------~~~~~I~~I~VGNE~l-~~~~---~~~~Ll~~i~~v~~~L~ 151 (348)
..+..+..+.+.|++...... .++..+++-.+-=|.= +... --+.|+..++++.+.|.
T Consensus 100 q~~~~d~~~~~~yl~~~l~~~~~qa~~~~~~~~~~v~GWYiP~ElDd~~W~~~~rR~~L~~~L~~~~~~l~ 170 (296)
T PRK09936 100 MHQKQDGAALESYLNRQLGASLQQARLWSAAWGVPVDGWYLPAELDDLNWRDEARRQPLLTWLNAAQRLID 170 (296)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeeeccchhcccCHHHHHHHHHHHHHHHHhCC
Confidence 122223333344443321110 1233455544444543 1222 24557778888877765
|
|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Probab=88.05 E-value=4.3 Score=40.21 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=76.6
Q ss_pred CCeEEEecC-ChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCC-C-cchH
Q 018955 61 IRRMRLYDP-NREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG-D-NFAQ 137 (348)
Q Consensus 61 ~~~VRlY~~-d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~-~-~~~~ 137 (348)
++.|-+|+. ++.++..+.+.|++|++..-.. .+ ...+++...+++++- ..+......++|-+==|-... + ....
T Consensus 56 ~tti~~~~~~~~~~~~~A~~~~v~v~~~~~~~-~~-~l~~~~~R~~fi~si-v~~~~~~gfDGIdIDwE~p~~~~~~d~~ 132 (358)
T cd02875 56 VTTIAIFGDIDDELLCYAHSKGVRLVLKGDVP-LE-QISNPTYRTQWIQQK-VELAKSQFMDGINIDIEQPITKGSPEYY 132 (358)
T ss_pred ceEEEecCCCCHHHHHHHHHcCCEEEEECccC-HH-HcCCHHHHHHHHHHH-HHHHHHhCCCeEEEcccCCCCCCcchHH
Confidence 688888854 6789999999999999864322 22 223444444444433 222222235566665554432 1 2456
Q ss_pred HHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCccccccccccc
Q 018955 138 YLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA 212 (348)
Q Consensus 138 ~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~ 212 (348)
.+...|+++|++|++.+..- .+|.+..+ .|+....+ ..+ +.-|++.+|++.+-.|=|..
T Consensus 133 ~~t~llkelr~~l~~~~~~~--~Lsvav~~-------~p~~~~~~--~yd-----~~~l~~~vD~v~lMtYD~h~ 191 (358)
T cd02875 133 ALTELVKETTKAFKKENPGY--QISFDVAW-------SPSCIDKR--CYD-----YTGIADASDFLVVMDYDEQS 191 (358)
T ss_pred HHHHHHHHHHHHHhhcCCCc--EEEEEEec-------Cccccccc--ccC-----HHHHHhhCCEeeEEeecccC
Confidence 78899999999999876432 34433221 12111100 001 12367888999999998754
|
Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase. |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=84.97 E-value=27 Score=35.96 Aligned_cols=250 Identities=15% Similarity=0.229 Sum_probs=112.9
Q ss_pred HHHHHhhCCCCeEEEecC---C--------------------hHHHHHHhcCCCEEEEecCC--Cchhh-----h-----
Q 018955 52 VIALYNQNNIRRMRLYDP---N--------------------REALEALRGSNIEVMLGLPN--NDLRR-----I----- 96 (348)
Q Consensus 52 v~~ll~~~~~~~VRlY~~---d--------------------~~vl~A~~~~glkV~lGv~~--~~~~~-----~----- 96 (348)
+..+.+..||++||+.+. | ..++..+.+.||+-++-+.. ..+.+ +
T Consensus 45 l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~~~~~~~Ynf~~lD~i~D~l~~~g~~P~vel~f~p~~~~~~~~~~~~~~~~ 124 (486)
T PF01229_consen 45 LRELQEELGFRYVRFHGLFSDDMMVYSESDEDGIPPYNFTYLDQILDFLLENGLKPFVELGFMPMALASGYQTVFWYKGN 124 (486)
T ss_dssp HHHHHCCS--SEEEES-TTSTTTT-EEEEETTEEEEE--HHHHHHHHHHHHCT-EEEEEE-SB-GGGBSS--EETTTTEE
T ss_pred HHHHHhccCceEEEEEeeccCchhhccccccCCCCcCChHHHHHHHHHHHHcCCEEEEEEEechhhhcCCCCccccccCC
Confidence 344445678999998733 1 25788888999997665532 11100 0
Q ss_pred ---hhcH----HHHHHHHHhhccccCCCceEE--EEEecccccCCC----cchHHHHHHHHHHHHHHHHcCCCCceEEee
Q 018955 97 ---ASNQ----AEANTWVQNNVRNFANNVKFK--YIAVGNEAKPGD----NFAQYLVPAMRNIQNAINAAGLGNQIKVST 163 (348)
Q Consensus 97 ---a~~~----~~a~~wv~~~v~~~~~~~~I~--~I~VGNE~l~~~----~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT 163 (348)
.++. +.+.++++.-+.+| +...|+ ..=|=||+=... ....+-...-+.+..+||+.. +.++|+-
T Consensus 125 ~~pp~~~~~W~~lv~~~~~h~~~RY-G~~ev~~W~fEiWNEPd~~~f~~~~~~~ey~~ly~~~~~~iK~~~--p~~~vGG 201 (486)
T PF01229_consen 125 ISPPKDYEKWRDLVRAFARHYIDRY-GIEEVSTWYFEIWNEPDLKDFWWDGTPEEYFELYDATARAIKAVD--PELKVGG 201 (486)
T ss_dssp -S-BS-HHHHHHHHHHHHHHHHHHH-HHHHHTTSEEEESS-TTSTTTSGGG-HHHHHHHHHHHHHHHHHH---TTSEEEE
T ss_pred cCCcccHHHHHHHHHHHHHHHHhhc-CCccccceeEEeCcCCCcccccCCCCHHHHHHHHHHHHHHHHHhC--CCCcccC
Confidence 0111 22333333334333 111111 345689965432 245667788888888888874 3588887
Q ss_pred eeeccccccccCCCCcccccCccchhhHHHHHHhh---cCCcccccccccccccCCCCCCccccccccCCceeccCCcch
Q 018955 164 AIETGALGESFPPSRGSFKQDYRPILDPLIRFLNE---NRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSY 240 (348)
Q Consensus 164 ~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~---~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y 240 (348)
+-. .+. . ...+...++|..+ .-||++.|.||+=.... +.-.. . .... ..
T Consensus 202 p~~--~~~--~-----------~~~~~~~l~~~~~~~~~~DfiS~H~y~~~~~~~---~~~~~--~----~~~~----~~ 253 (486)
T PF01229_consen 202 PAF--AWA--Y-----------DEWCEDFLEFCKGNNCPLDFISFHSYGTDSAED---INENM--Y----ERIE----DS 253 (486)
T ss_dssp EEE--ETT--------------THHHHHHHHHHHHCT---SEEEEEEE-BESESE----SS-E--E----EEB------H
T ss_pred ccc--ccc--H-----------HHHHHHHHHHHhcCCCCCCEEEEEecccccccc---cchhH--H----hhhh----hH
Confidence 611 011 0 1234555565543 45999999999632210 00000 0 0000 01
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCC--CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEE--
Q 018955 241 RSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDG--ALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFA-- 316 (348)
Q Consensus 241 ~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~--~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~-- 316 (348)
..+++ ++.-++..+...+.+++++.++| |.+.-.+. .--|.-+|.-..+++++... ..++.|-+-
T Consensus 254 ~~~~~-~~~~~~~~~~~e~~p~~~~~~tE--~n~~~~~~~~~~dt~~~aA~i~k~lL~~~~--------~~l~~~sywt~ 322 (486)
T PF01229_consen 254 RRLFP-ELKETRPIINDEADPNLPLYITE--WNASISPRNPQHDTCFKAAYIAKNLLSNDG--------AFLDSFSYWTF 322 (486)
T ss_dssp HHHHH-HHHHHHHHHHTSSSTT--EEEEE--EES-SSTT-GGGGSHHHHHHHHH-HHHHGG--------GT-SEEEES-S
T ss_pred HHHHH-HHHHHHHHHhhccCCCCceeecc--cccccCCCcchhccccchhhHHHHHHHhhh--------hhhhhhhccch
Confidence 11222 12223233455577899999999 77655421 01334455555555555541 123433332
Q ss_pred --eecCCCCCCCCCCCceeeecCCCCeee
Q 018955 317 --MFDENGKTGPEIERHWGLFAPTRQPRY 343 (348)
Q Consensus 317 --~fDe~wK~~~~~E~~wGl~~~d~~~ky 343 (348)
.|.|.--+...+-.-|||++.+|-+|-
T Consensus 323 sD~Fee~~~~~~pf~ggfGLlt~~gI~KP 351 (486)
T PF01229_consen 323 SDRFEENGTPRKPFHGGFGLLTKLGIPKP 351 (486)
T ss_dssp BS---TTSS-SSSSSS-S-SEECCCEE-H
T ss_pred hhhhhccCCCCCceecchhhhhccCCCch
Confidence 233332222246666999999987764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination | Back alignment and domain information |
|---|
Probab=84.05 E-value=8.9 Score=36.85 Aligned_cols=125 Identities=16% Similarity=0.233 Sum_probs=69.4
Q ss_pred hHHHHHHhcCCCEEEEecCCCc--------hhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHH
Q 018955 71 REALEALRGSNIEVMLGLPNND--------LRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPA 142 (348)
Q Consensus 71 ~~vl~A~~~~glkV~lGv~~~~--------~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~ 142 (348)
+.++.++++.++||++.|.+.. ...+.++++...+.+ +++..+.....+.+|.+-=|.+. .+........
T Consensus 48 ~~~~~~a~~~~~kv~~~i~~~~~~~~~~~~~~~~l~~~~~r~~fi-~~iv~~l~~~~~DGidiDwE~~~-~~d~~~~~~f 125 (313)
T cd02874 48 ERLIEAAKRRGVKPLLVITNLTNGNFDSELAHAVLSNPEARQRLI-NNILALAKKYGYDGVNIDFENVP-PEDREAYTQF 125 (313)
T ss_pred HHHHHHHHHCCCeEEEEEecCCCCCCCHHHHHHHhcCHHHHHHHH-HHHHHHHHHhCCCcEEEecccCC-HHHHHHHHHH
Confidence 5788888889999998887532 233444444333332 23332222223556666556553 2345678999
Q ss_pred HHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCccc-ccCccchhhHHHHHHhhcCCccccccccccc
Q 018955 143 MRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSF-KQDYRPILDPLIRFLNENRSPLLLNLYPYFA 212 (348)
Q Consensus 143 i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f-~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~ 212 (348)
|+++|++|.+.|+ .++++.. |..... ...+... -+ +.-|++.+|++.+-.|=|..
T Consensus 126 l~~lr~~l~~~~~----~lsv~~~---------p~~~~~~~~~~~~~-~~-~~~l~~~vD~v~lm~YD~~~ 181 (313)
T cd02874 126 LRELSDRLHPAGY----TLSTAVV---------PKTSADQFGNWSGA-YD-YAAIGKIVDFVVLMTYDWHW 181 (313)
T ss_pred HHHHHHHhhhcCc----EEEEEec---------Cccccccccccccc-cC-HHHHHhhCCEEEEEEeccCC
Confidence 9999999987764 3333211 110000 0000000 00 22367888999998887754
|
CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis. |
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=83.39 E-value=4 Score=40.00 Aligned_cols=174 Identities=13% Similarity=0.212 Sum_probs=72.0
Q ss_pred HHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhccc---cC--CCceEEEEEecccccCCC---c-chHHHHHHH
Q 018955 73 ALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRN---FA--NNVKFKYIAVGNEAKPGD---N-FAQYLVPAM 143 (348)
Q Consensus 73 vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~---~~--~~~~I~~I~VGNE~l~~~---~-~~~~Ll~~i 143 (348)
+-+-+.++|++|+.|+.--.-.........-..|=-+|... |- .+-.|.+-=.|||.--.+ . .+.++..-.
T Consensus 114 l~~F~~~tG~~liFgLNAL~g~~~~~~~~~~g~WnssNA~~Ll~Yt~skgy~I~~WELGNEl~g~g~~~~v~a~qyakD~ 193 (319)
T PF03662_consen 114 LNNFAQKTGLKLIFGLNALLGRRQLADRDWDGSWNSSNAQSLLKYTASKGYNIDSWELGNELNGSGVGASVSAEQYAKDF 193 (319)
T ss_dssp HHHHHHHHT-EEEEEE-TTTS-HHHHHHHHHHHHHHH-TTTEEEEEESS-GGG--------HHHHSSSTT--HHHHHHHH
T ss_pred HHHHHHHhCCEEEEEecccCCCCCCCCCCcCCCCChHHHHHHHHHHHHcCCCccccccccccCCCCCCCccCHHHHHHHH
Confidence 44445679999999997421111011123345676666443 21 234688888999965433 1 588899989
Q ss_pred HHHHHHHHHc---CCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhh-cCCcccccccccccccCCCCC
Q 018955 144 RNIQNAINAA---GLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNE-NRSPLLLNLYPYFAIAGNRQI 219 (348)
Q Consensus 144 ~~v~~~L~~~---gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~-~~d~~~vN~yPff~~~~~~~i 219 (348)
.++|+.|+.. .+.+ -.|.-+.. .|. ...+++.|+-.-+ ..|.|.-|.|+. ....++..
T Consensus 194 ~~Lr~il~~iy~~~~~~-P~v~gP~~-------------~~d---~~w~~~FL~~~g~~~vD~vT~H~Y~l-g~g~d~~l 255 (319)
T PF03662_consen 194 IQLRKILNEIYKNALPG-PLVVGPGG-------------FFD---ADWLKEFLKASGPGVVDAVTWHHYNL-GSGRDPAL 255 (319)
T ss_dssp ---HHHHHHHHHH-TT----EEEEEE-------------SS----GGGHHHHHHHTTTT--SEEEEEEEEE---TT-TT-
T ss_pred HHHHHHHHHHHhcCCCC-CeEECCCC-------------CCC---HHHHHHHHHhcCCCccCEEEEEecCC-CCCchHHH
Confidence 8888888763 1111 23444432 111 2344555554444 378899898863 32211110
Q ss_pred CccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC
Q 018955 220 SLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG 277 (348)
Q Consensus 220 ~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~ 277 (348)
.+ . ..+. .|-+.+..++..+...+++.+ ++++++++|||=...|+
T Consensus 256 -~~-~--------~l~p--~~Ld~~~~~~~~~~~~v~~~~-p~~~~WlGEtg~Ay~gG 300 (319)
T PF03662_consen 256 -IE-D--------FLNP--SYLDTLADTFQKLQQVVQEYG-PGKPVWLGETGSAYNGG 300 (319)
T ss_dssp -HH-H--------HTS----HHHHHHHHHHHHH-----HH-H---EEEEEEEEESTT-
T ss_pred -HH-H--------hcCh--hhhhHHHHHHHHHhhhhcccC-CCCCeEEeCcccccCCC
Confidence 00 0 1111 122223333344444444444 78999999999887776
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 348 | ||||
| 3em5_A | 316 | Crystal Structure Of A Native Endo Beta-1,3-Glucana | 1e-106 | ||
| 2cyg_A | 312 | Crystal Structure At 1.45- Resolution Of The Major | 1e-100 | ||
| 3ur7_A | 323 | Higher-density Crystal Structure Of Potato Endo-1,3 | 6e-90 | ||
| 4gzi_A | 323 | Active-site Mutant Of Potato Endo-1,3-beta-glucanas | 3e-89 | ||
| 1aq0_A | 306 | Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G | 6e-76 | ||
| 1ghs_A | 306 | The Three-Dimensional Structures Of Two Plant Beta- | 2e-73 |
| >pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 | Back alignment and structure |
|
| >pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 | Back alignment and structure |
|
| >pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 | Back alignment and structure |
|
| >pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 | Back alignment and structure |
|
| >pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 | Back alignment and structure |
|
| >pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 348 | |||
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 1e-119 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 1e-113 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 1e-113 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 1e-110 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 1e-108 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-07 |
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 | Back alignment and structure |
|---|
Score = 346 bits (888), Expect = e-119
Identities = 178/314 (56%), Positives = 237/314 (75%), Gaps = 3/314 (0%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYGMLGNNLP +V++LY NNI RMRLYDPN+ AL+ALR SNI+V+L +P +D++
Sbjct: 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
+ASN + A W++ NV + +V F+YIAVGNE PG + AQY++PAMRNI NA+++AG
Sbjct: 61 SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAG 120
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA-I 213
L NQIKVSTA++TG LG S+PPS G+F + L P+++FL N +PLL+N+YPYF+
Sbjct: 121 LQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYT 180
Query: 214 AGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273
QISL YALF + VV DG SY++LFDAI+DAV+AALE+ GG ++ +V+SESGWP
Sbjct: 181 GNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240
Query: 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWG 333
+AGG + NA+TYN NLI+HV G+P+RPG+ IE YIF MF+EN K G IE+++G
Sbjct: 241 SAGGGAE-ASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAGG-IEQNFG 298
Query: 334 LFAPTRQPRYQINF 347
LF P +QP YQI+F
Sbjct: 299 LFYPNKQPVYQISF 312
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 | Back alignment and structure |
|---|
Score = 330 bits (846), Expect = e-113
Identities = 147/314 (46%), Positives = 205/314 (65%), Gaps = 9/314 (2%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYGM NNLP+ V++++ N I+ MRLY PN+ AL+A+ G+ I V++G PN+ L
Sbjct: 1 IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLS 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
+A++ A A +WV++N++ + V F+Y+ VGNE + LVPAM+N+ A+ AAG
Sbjct: 61 NLAASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG--GATRNLVPAMKNVHGALVAAG 117
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIA 214
LG IKV+T++ LG PPS GSF + + P+++FL +PL+ N+YPY A A
Sbjct: 118 LG-HIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYLAWA 176
Query: 215 GN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273
N + + YALF + TVV DG+ Y++LFD +DA Y A+ K GG S+ +V+SESGWP
Sbjct: 177 YNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWP 236
Query: 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWG 333
+ GG A NAR YN +LI HV RG+P+ PG IETYIFAMF+EN K +E++WG
Sbjct: 237 SGGGTAA--TPANARFYNQHLINHVGRGTPRHPG-AIETYIFAMFNENQKDSG-VEQNWG 292
Query: 334 LFAPTRQPRYQINF 347
LF P Q Y INF
Sbjct: 293 LFYPNMQHVYPINF 306
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 | Back alignment and structure |
|---|
Score = 330 bits (846), Expect = e-113
Identities = 190/320 (59%), Positives = 243/320 (75%), Gaps = 9/320 (2%)
Query: 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDL 93
++GVCYGM GNNLP +VIALY ++NI RMR+YDPN+ LEALRGSNIE++LG+PN+DL
Sbjct: 1 EVGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDL 60
Query: 94 RRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD----NFAQYLVPAMRNIQNA 149
+ + N + A +WVQ NVR F ++V+F+YIAVGNE P + AQ+++PAMRNI +A
Sbjct: 61 QSLT-NPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDA 119
Query: 150 INAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYP 209
I +AGL +QIKVSTAI+ +G S+PPS G+F+ D R L+P+IRFL+ RSPLL N+YP
Sbjct: 120 IRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYP 179
Query: 210 YFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVIS 268
YF AGN R ISL YALF S VV DG Y++LFDA LDA+Y+ALE+ GGSL +V+S
Sbjct: 180 YFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVS 239
Query: 269 ESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEI 328
ESGWP+AG A DN RTY +NLIQHVKRG+PKRP R IETY+FAMFDEN K PE+
Sbjct: 240 ESGWPSAGAFAA--TFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDENKK-QPEV 296
Query: 329 ERHWGLFAPTRQPRYQINFN 348
E+H+GLF P + +Y +NF+
Sbjct: 297 EKHFGLFFPNKWQKYNLNFS 316
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 | Back alignment and structure |
|---|
Score = 324 bits (830), Expect = e-110
Identities = 158/315 (50%), Positives = 204/315 (64%), Gaps = 11/315 (3%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYG++GNNLPS+ DV+ LY I MR+Y + +AL ALR S I ++L + N+ L
Sbjct: 1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLA 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
IA++ + A +WVQNNVR + V KYIA GNE + Q ++PAMRN+ A++AAG
Sbjct: 61 NIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG--GATQSILPAMRNLNAALSAAG 118
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA-I 213
LG IKVST+I + SFPPS G FK Y + + R L +PLL N+YPYFA
Sbjct: 119 LG-AIKVSTSIRFDEVANSFPPSAGVFKNAY---MTDVARLLASTGAPLLANVYPYFAYR 174
Query: 214 AGNRQISLDYALFRSQQTVV-SDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGW 272
ISL+YA F+ TV + L+Y SLFDA++DAVYAALEK G ++ +V+SESGW
Sbjct: 175 DNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGW 234
Query: 273 PTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHW 332
P+AGG A + NARTYN LI HV G+PK+ +ETYIFAMF+EN KTG ER +
Sbjct: 235 PSAGGFAA--SAGNARTYNQGLINHVGGGTPKKRE-ALETYIFAMFNENQKTGDATERSF 291
Query: 333 GLFAPTRQPRYQINF 347
GLF P + P Y I F
Sbjct: 292 GLFNPDKSPAYNIQF 306
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 | Back alignment and structure |
|---|
Score = 318 bits (816), Expect = e-108
Identities = 165/320 (51%), Positives = 224/320 (70%), Gaps = 13/320 (4%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYG + NNLPS +DVI LYN NNI++MR+Y P+ AL+GSNIE++L +PN DL
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLE 62
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD---NFAQYLVPAMRNIQNAIN 151
+A N + AN WVQ+N+RN +VKFKYIAVGNE PG +A+++ PAM NI NA++
Sbjct: 63 ALA-NPSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALS 121
Query: 152 AAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYF 211
+AGL NQIKVST+ +G L ++PP F+++Y+ ++P+I FL + PLL N+YPYF
Sbjct: 122 SAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLANIYPYF 181
Query: 212 AIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISES 270
N + L YALF Q+ Y++LFDA++D++Y A EK GG ++ I++SES
Sbjct: 182 GHIDNTNAVPLSYALFNQQR----RNDTGYQNLFDALVDSMYFATEKLGGQNIEIIVSES 237
Query: 271 GWPTAGGDGALTNVDNARTYNNNLIQHVKR--GSPKRPGRPIETYIFAMFDENGKTGPEI 328
GWP+ G A + NARTY NLI HVKR G+PK+PG+ IETY+FAMFDEN K G
Sbjct: 238 GWPSEGHPAA--TLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKKGEAS 295
Query: 329 ERHWGLFAPTRQPRYQINFN 348
E+H+GLF P ++P+YQ+NFN
Sbjct: 296 EKHFGLFNPDQRPKYQLNFN 315
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 5e-07
Identities = 43/336 (12%), Positives = 89/336 (26%), Gaps = 107/336 (31%)
Query: 28 LDTTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLG 87
+D + + Y +D+++++ + D L I+ ++
Sbjct: 7 MDFETGEHQYQY----------KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM 56
Query: 88 LPNND--LRRIASNQAEANTWV-----QNNVRNFAN-----NVKFKYIAVGNEAK-P--- 131
+ R+ W + V+ F N KF + E + P
Sbjct: 57 SKDAVSGTLRL--------FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108
Query: 132 ------------GDN--FAQYLVP----------AMRNIQNAINA-----AGLGNQIKVS 162
DN FA+Y V A+ ++ A N G G
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 163 TAIETGALGESFPPSRG----SFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQ 218
+ + + K P + ++ L + LL + P + +
Sbjct: 169 DVCLSYKVQCKMD--FKIFWLNLKNCNSP--ETVLEMLQK----LLYQIDPNWTSRSDHS 220
Query: 219 ISLDYA----------LFRSQQTVVSDGSLSY-RSLFDAILDAVYAA--LEKTGGGSLGI 265
++ L +S+ Y L +L V A +
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKP---------YENCLL--VLLNVQNAKAWNAFNLSCKIL 269
Query: 266 VISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRG 301
+ + +T+ +A T + + H
Sbjct: 270 LTTR--------FKQVTDFLSAATTTHISLDHHSMT 297
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 348 | |||
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 100.0 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 100.0 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 100.0 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 100.0 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 100.0 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.84 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.71 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.68 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.6 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.38 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 98.85 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 98.79 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 98.73 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 98.69 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 98.68 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 98.54 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 98.51 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 98.51 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 98.49 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 98.47 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 98.44 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 98.4 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 98.37 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 98.35 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 98.3 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 98.28 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 98.27 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 98.25 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 98.21 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 98.2 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 98.19 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 98.15 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 98.13 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 98.13 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.09 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 98.08 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 98.07 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 98.06 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 98.03 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 98.03 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 97.99 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 97.98 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 97.97 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 97.97 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 97.95 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 97.93 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 97.89 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 97.89 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 97.83 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 97.78 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 97.72 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 97.7 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 97.68 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 97.68 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 97.62 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 97.61 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 97.57 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 97.5 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 97.47 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 97.45 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 97.36 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 97.35 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 97.34 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 97.21 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 97.17 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 97.14 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 97.13 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 97.05 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 97.05 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 97.04 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 97.01 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 96.97 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 96.95 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 96.91 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 96.87 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 96.84 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 96.84 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 96.7 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 96.68 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 96.56 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 96.5 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 96.46 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 96.43 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 96.12 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 96.1 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 95.94 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 95.89 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 95.77 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 95.47 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 95.22 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 95.16 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 94.97 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 94.63 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 94.3 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 94.13 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 93.66 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 93.34 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 92.77 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 92.13 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 90.8 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 90.11 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 88.53 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 88.28 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 87.42 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 85.63 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 85.59 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 84.79 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 83.54 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 83.22 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 83.1 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 81.65 |
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-94 Score=692.69 Aligned_cols=310 Identities=61% Similarity=1.062 Sum_probs=300.3
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||+.++|+|+|++|+++||++||++||||++|+++|+|++++||+|+|||||+++++++ ++.+|.+||++||.+|
T Consensus 2 iGvnyG~~~~nlp~p~~vv~llks~gi~~VRlYdaD~~vL~Al~~sgi~v~vGV~n~~l~~la-~~~~A~~WV~~nV~~y 80 (316)
T 3em5_A 2 VGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQSLT-NPSNAKSWVQKNVRGF 80 (316)
T ss_dssp CEEECCCCCTTCCCHHHHHHHHHHTTCCEEECSSCCHHHHHHHTTCCCEEEEEECGGGHHHHT-SHHHHHHHHHHHTGGG
T ss_pred eeEEcCcCCCCCCCHHHHHHHHHHcCCCEEEEecCCHHHHHHhhcCCceEEEecccchhhhcc-CHHHHHHHHHHhhhhc
Confidence 799999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred CCCceEEEEEecccccCCCcc----hHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhh
Q 018955 115 ANNVKFKYIAVGNEAKPGDNF----AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILD 190 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~----~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~ 190 (348)
+|+++|++|+||||++++++. +++|+++|++||++|+++||+++|||||++++++|.++||||+|.||+|+.++|+
T Consensus 81 ~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~~~~~ 160 (316)
T 3em5_A 81 WSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLN 160 (316)
T ss_dssp TTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGHHHHH
T ss_pred CCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHHHHHH
Confidence 999999999999999998753 8999999999999999999998899999999999999999999999999999999
Q ss_pred HHHHHHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEee
Q 018955 191 PLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISE 269 (348)
Q Consensus 191 ~~l~fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~E 269 (348)
|+|+||.+++||++||+||||++..+ ++|+++||+|+++++++.|++++|+|+||+|+|++++||+|+|+++++|+|+|
T Consensus 161 pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~V~E 240 (316)
T 3em5_A 161 PIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSE 240 (316)
T ss_dssp HHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCceEecc
Confidence 99999999999999999999999888 89999999999988888999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeecccC
Q 018955 270 SGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINFN 348 (348)
Q Consensus 270 TGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~~ 348 (348)
|||||+|+.+ ||++||++|+++++||+.+|||+||+.++++|||++|||+||+ ++.|+|||||++||+|||+|+|+
T Consensus 241 tGWPs~G~~~--as~~na~~y~~~li~~~~~GTP~rp~~~~~~y~F~lfDe~~K~-~~~E~~~Glf~~d~~~ky~l~~~ 316 (316)
T 3em5_A 241 SGWPSAGAFA--ATFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKHFGLFFPNKWQKYNLNFS 316 (316)
T ss_dssp ECCCSSSSTT--CCHHHHHHHHHHHHHHTTSCCSSSCSSCCCEEESCSBCCTTCS-SGGGGCCCSBCTTSCBSSCCCCC
T ss_pred ccCCCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEEeecCCCCC-CCCCceeeEECCCCCEeecCCCC
Confidence 9999999866 9999999999999999988999999878999999999999999 78999999999999999999985
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-92 Score=682.18 Aligned_cols=308 Identities=53% Similarity=0.985 Sum_probs=295.2
Q ss_pred eeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhccc
Q 018955 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRN 113 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~ 113 (348)
.+|||||+.++|+||+++|+++||+++|++||||++|+.+|+|++++||+|+||||++++.++++ +++|.+||+++|.+
T Consensus 2 ~iGv~yG~~~~nlp~p~~Vv~llks~gi~~VRlY~~D~~vL~Al~~sgi~V~lGV~n~~l~~la~-~~~A~~WV~~nV~~ 80 (323)
T 3ur8_A 2 PIGVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLEALAN-PSNANGWVQDNIRN 80 (323)
T ss_dssp CEEEEECCCSSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTCCCEEEEEECGGGTGGGGS-HHHHHHHHHHHTGG
T ss_pred ceeEEcCcCCCCCCCHHHHHHHHHhCCCCeEEecCCCHHHHHHHHhcCCeEEEeccccchhhhhh-HHHHHHHHHHHHhh
Confidence 58999999999999999999999999999999999999999999999999999999999999887 89999999999999
Q ss_pred cCCCceEEEEEecccccCCCc---chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhh
Q 018955 114 FANNVKFKYIAVGNEAKPGDN---FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILD 190 (348)
Q Consensus 114 ~~~~~~I~~I~VGNE~l~~~~---~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~ 190 (348)
|+|+++|++|+||||+|++++ .+++|+++|++||++|+++||+++|||||++++++|.++||||+|.||+|+.++|+
T Consensus 81 y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~aGl~~~IkVsT~~~~~v~~~s~pPS~g~F~~~~~~~~~ 160 (323)
T 3ur8_A 81 HFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSSAGLQNQIKVSTSTYSGLLTNTYPPRDSIFREEYKSFIN 160 (323)
T ss_dssp GTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGEECCSSGGGCEECGGGHHHHH
T ss_pred hCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHHCCCCCCceeeeeeeccccccCCCCCcceechhHHHHHH
Confidence 999999999999999999874 48999999999999999999998899999999999999999999999999999999
Q ss_pred HHHHHHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEee
Q 018955 191 PLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISE 269 (348)
Q Consensus 191 ~~l~fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~E 269 (348)
|+|+||++++||++||+||||++..+ .+|+++||+|++++ |++++|+|+||+|+|++++||+++|+++++|+|+|
T Consensus 161 pil~fL~~~~sp~~vN~yPyf~~~~~~~~i~l~yAlf~~~~----d~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~vsE 236 (323)
T 3ur8_A 161 PIIGFLARHNLPLLANIYPYFGHIDNTNAVPLSYALFNQQR----RNDTGYQNLFDALVDSMYFATEKLGGQNIEIIVSE 236 (323)
T ss_dssp HHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHHTCCSS----CCTTSCSSHHHHHHHHHHHHHHTTTCTTCCEEEEE
T ss_pred HHHHHHHhcCCeeEEecchhhhhccCCCCCChhhhccccCC----CccchHHHHHHHHHHHHHHHHHHcCCCCceEEecc
Confidence 99999999999999999999999887 89999999998643 78899999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCCHHHHHHHHHHHHHHHH--hcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 270 SGWPTAGGDGALTNVDNARTYNNNLIQHVK--RGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 270 TGWPS~G~~~~vas~~na~~y~~~~~~~~~--~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|||||+|+.+ ||++||++|++++++|+. +|||+||+.++++|||++|||+||++++.|+|||||++||+|||+|+|
T Consensus 237 tGWPs~G~~~--as~~na~~y~~~li~~~~~~~GtP~rp~~~~~~y~F~lfde~~K~g~~~E~~wGlf~~d~~~ky~~~~ 314 (323)
T 3ur8_A 237 SGWPSEGHPA--ATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKKGEASEKHFGLFNPDQRPKYQLNF 314 (323)
T ss_dssp ECCCSSSBTT--BCHHHHHHHHHHHHHHHHHTCBCSSSBTCCCCEEEECSBCCTTCCSSGGGGCCCSBCTTSCBSSCCCC
T ss_pred ccCCCCCCCC--CCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEeecCCCCCCCCcCceeeEECCCCCEeeccce
Confidence 9999999855 999999999999999997 589999988899999999999999977899999999999999999987
Q ss_pred C
Q 018955 348 N 348 (348)
Q Consensus 348 ~ 348 (348)
.
T Consensus 315 ~ 315 (323)
T 3ur8_A 315 N 315 (323)
T ss_dssp S
T ss_pred e
Confidence 4
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-91 Score=674.21 Aligned_cols=311 Identities=58% Similarity=1.042 Sum_probs=297.2
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||+++++|||+++|+++||++||++||||++|+++|+|++++||+|+||||++++.+++++++++.+||+++|.+|
T Consensus 1 iGv~Yg~~~~~~ps~~~vv~llk~~~i~~vRlY~~d~~vl~A~~~tgi~v~lgv~n~~~~~~a~~~~~a~~Wv~~nv~~y 80 (312)
T 2cyg_A 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAY 80 (312)
T ss_dssp CEEECCCCCSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGGG
T ss_pred CeEEccCCCCCCCCHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccccchhhhhhCHHHHHHHHHHHHHhh
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
+|+++|++|+||||+|.++..+++|+++|++||++|+++||+++|||||++++++|..+||||+|.|++|+.++|+|+++
T Consensus 81 ~~~~~i~~I~VGNEvl~~~~~~~~L~~am~~v~~aL~~~gl~~~ikVst~~~~~~~~~s~pPS~g~f~~~~~~~~~p~l~ 160 (312)
T 2cyg_A 81 WPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQ 160 (312)
T ss_dssp TTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHHHHHHHHHH
T ss_pred CCCceEEEEEeccccccCCCCHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCchhhcccCCCCCcccccchHHHHHHHHHH
Confidence 99999999999999998434799999999999999999999988999999999999999999999999999899999999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccC
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWP 273 (348)
||++++|||++|+||||++..+ .+|+++||+|++++.++.|++++|+|+||+|+|++++||+++|+++++|+|+|||||
T Consensus 161 fl~~~~sp~~vN~yPyf~~~~~p~~i~l~yalf~~~~~~v~d~~~~y~n~fda~~Dav~~al~~~g~~~~~ivVsEtGWP 240 (312)
T 2cyg_A 161 FLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240 (312)
T ss_dssp HHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCC
T ss_pred HHHhcCCcceeccCchhhccCCCCCccchhhhccCCCceeccccccchhhHHHHHHHHHHHHHHhCCCCCeEEEEeeeCC
Confidence 9999999999999999999888 799999999998776777888999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 274 S~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|+|+.. +||++||++|++++++|+.+|||+||+.++++|||++|||+||+| ++|||||||++||+|||+|+|
T Consensus 241 S~G~~~-~as~~na~~y~~~li~~~~~GtP~rp~~~~~~yiF~lfdE~~K~G-~~E~~wGlf~~d~~~ky~l~~ 312 (312)
T 2cyg_A 241 SAGGGA-EASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAG-GIEQNFGLFYPNKQPVYQISF 312 (312)
T ss_dssp SSSSST-TSSHHHHHHHHHHHHHHGGGCCSSSCSSCCCEEESCSBCCTTSCS-SGGGCCCSBCTTSCBSSCCCC
T ss_pred CCCCCC-CCCHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEEEECCCCCCC-CCCCceeEECCCCCEecccCC
Confidence 999633 399999999999999999899999997789999999999999986 899999999999999999986
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-91 Score=666.95 Aligned_cols=305 Identities=48% Similarity=0.905 Sum_probs=294.0
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||+.++++|++++|+++||+++|++||||++|+++|+|++++||+|+||||++++.+++++++++.+||+++|.+|
T Consensus 1 iGv~yg~~~~nlp~~~~vv~llk~~~i~~VRlY~~d~~vL~A~~~tgi~v~lgv~n~~~~~~a~~~~~a~~wv~~nv~~y 80 (306)
T 1aq0_A 1 IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNIQAY 80 (306)
T ss_dssp CEEECCCCCSSCCCHHHHHHHHHHHTCCEEEESSCCHHHHHHHTTSCCEEEEEECGGGHHHHHHCHHHHHHHHHHHTTTC
T ss_pred CeEecccCCCCCCCHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEecccchhhHhhhCHHHHHHHHHHhhccC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
|+++|++|+||||+|+ ++ +++|+++|++||++|+++||++ |||||++++++|.++||||+|.|++|+.++|+|+|+
T Consensus 81 -~~~~I~~I~VGNEvl~-g~-~~~L~~am~~v~~aL~~~gl~~-IkVsT~~~~~v~~~s~pPS~g~f~~~~~~~~~p~l~ 156 (306)
T 1aq0_A 81 -PKVSFRYVCVGNEVAG-GA-TRNLVPAMKNVHGALVAAGLGH-IKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQ 156 (306)
T ss_dssp -TTSEEEEEEEEESCCG-GG-GGGHHHHHHHHHHHHHHTTCTT-SEEEEEEEGGGEEECSSGGGCEECHHHHHHHHHHHH
T ss_pred -CCccEEEEEecccccC-CC-HHHHHHHHHHHHHHHHHCCCCc-eeEeccccccccccCCCCcccccchhhHHHHHHHHH
Confidence 9999999999999998 45 9999999999999999999987 999999999999999999999999999889999999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccC
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWP 273 (348)
||++++|||++|+||||++..+ .+|+++||+|++++.++.|++++|+|+||+|+|++++||+++|+++++|+|+|||||
T Consensus 157 fL~~~~~~~~vN~yPyf~~~~~p~~i~l~yalf~~~~~~v~d~~~~y~n~fda~~dav~~al~~~g~~~~~ivVsEtGWP 236 (306)
T 1aq0_A 157 FLARTNAPLMANIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWP 236 (306)
T ss_dssp HHHHHTCCEEEECCHHHHHHHCTTSSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEECCCC
T ss_pred HHHhcCCceeeecchHhhhcCCCccCccchhhcCCCCccccCcchhhhhHHHHHHHHHHHHHHHhCCCCCeEEEeeeecC
Confidence 9999999999999999999888 789999999998777777888999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 274 S~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|+|+.+ ||++||++|++++++|+++|||+||+ ++++|||++|||+|| ++++|||||||++||+|||+|+|
T Consensus 237 S~G~~~--as~~na~~y~~~li~~~~~GtP~rp~-~~~~yiF~lfdE~~K-g~~~E~~wGlf~~d~~~ky~l~~ 306 (306)
T 1aq0_A 237 SGGGTA--ATPANARFYNQHLINHVGRGTPRHPG-AIETYIFAMFNENQK-DSGVEQNWGLFYPNMQHVYPINF 306 (306)
T ss_dssp SSSSTT--CCHHHHHHHHHHHHHHTTTBCSSSBS-CCCBEESCSBCCTTS-CSSGGGCCCSBCTTSCBSSCCCC
T ss_pred cCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCC-CceEEEEEEECCCCC-CCCcCCceeeECCCCCEeCCCCC
Confidence 999876 99999999999999999889999998 999999999999999 67899999999999999999986
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-90 Score=659.70 Aligned_cols=303 Identities=52% Similarity=0.892 Sum_probs=289.7
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||+.++++||+++|+++||+++|++||||++|+++|+|++++||+|+||||++++.+++++++++.+||+++|.+|
T Consensus 1 iGv~yg~~~~nlps~~~vv~llk~~~i~~vRlY~~d~~vL~A~~~tgi~v~lgv~n~~~~~~a~~~~~a~~Wv~~nv~~y 80 (306)
T 1ghs_A 1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPY 80 (306)
T ss_dssp CEEECCCCSSSCCCHHHHHHHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCGGGHHHHHHCHHHHHHHHHHHTTTT
T ss_pred CeEEcccCCCCCcCHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHhcCCEEEEeccccchhhhhhCHHHHHHHHHHHHhhh
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
+|+++|++|+||||+|++ .+++|+++|++||++|+++||+ +|||||++++++|..+||||+|.| ..+.|+|+++
T Consensus 81 ~~~~~i~~I~VGNEvl~~--~~~~L~~am~~v~~aL~~~gl~-~ikVst~~~~~~~~~s~pPs~g~F---~~~~~~p~l~ 154 (306)
T 1ghs_A 81 YPAVNIKYIAAGNEVQGG--ATQSILPAMRNLNAALSAAGLG-AIKVSTSIRFDEVANSFPPSAGVF---KNAYMTDVAR 154 (306)
T ss_dssp TTTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHHTCT-TSEEEEEEEGGGEECCSSGGGCEE---SSTHHHHHHH
T ss_pred CCCceEEEEEEeccccCC--CHHHHHHHHHHHHHHHHHCCCC-ceeEEeccchhhcccCCCCCccch---hhhhhhHHHH
Confidence 999999999999999984 8899999999999999999998 799999999999999999999999 4679999999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCCceeccC--CcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeec
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDG--SLSYRSLFDAILDAVYAALEKTGGGSLGIVISESG 271 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~--~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETG 271 (348)
||++++||+++|+||||++..+ .+|+++||+| .++..+.|+ +++|+|+||+|+|++++||+++|+++++|+|+|||
T Consensus 155 fL~~~~~~~~vN~yPyf~~~~~p~~i~l~yalf-~~~~~v~d~~t~~~y~n~fda~~Dav~~al~~~g~~~~~ivVsEtG 233 (306)
T 1ghs_A 155 LLASTGAPLLANVYPYFAYRDNPGSISLNYATF-QPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESG 233 (306)
T ss_dssp HHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHT-CTTCCEECTTTCCEECCHHHHHHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred HHHhcCCeeEeecChhhcccCCCCccccchhhc-CCCcceeccccccccchHHHHHHHHHHHHHHHcCCCCCeEEEeecc
Confidence 9999999999999999999887 7899999999 556666666 78999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 272 WPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 272 WPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|||+|+.+ ||++||++|++++++|+.+|||+||+ ++++|||++|||+||+++++|||||||++||+|||+|+|
T Consensus 234 WPS~G~~~--as~~na~~y~~~li~~~~~GTP~rp~-~~~~yiF~lfdE~~K~~~~~E~~wGlf~~d~~~ky~l~~ 306 (306)
T 1ghs_A 234 WPSAGGFA--ASAGNARTYNQGLINHVGGGTPKKRE-ALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 306 (306)
T ss_dssp CCSSSSTT--CCHHHHHHHHHHHHTTGGGCCSSCCS-CCCEEEECSBCCTTCCSSGGGGGCCSBCTTSCBSSCCCC
T ss_pred CCCCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCC-CceEEEEEEECCCCCCCCCCCCeeeeECCCCCEecCcCC
Confidence 99999866 99999999999999999899999998 999999999999999877899999999999999999986
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=193.43 Aligned_cols=228 Identities=16% Similarity=0.256 Sum_probs=159.8
Q ss_pred HHHHHHHhhCCCCeEEEecCCh-----HHHHHHhcCCCEEEEecCCCchhhhhhcH---HHHHHHHHhhccccCCCceEE
Q 018955 50 RDVIALYNQNNIRRMRLYDPNR-----EALEALRGSNIEVMLGLPNNDLRRIASNQ---AEANTWVQNNVRNFANNVKFK 121 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~d~-----~vl~A~~~~glkV~lGv~~~~~~~~a~~~---~~a~~wv~~~v~~~~~~~~I~ 121 (348)
.+++++||+.|++.||+|..++ ..++++.+.||.|++++++....-...++ .+..+-+++.|.+|++...|.
T Consensus 90 ~rDi~LmK~~GiN~VRvy~~~P~~~~d~~ldl~~~~GIyVIle~~~p~~~i~~~~P~~~~~~~~r~~~~V~ry~nhP~Vi 169 (555)
T 2w61_A 90 LRDIPFLKMLGVNTLRVYAIDPTKSHDICMEALSAEGMYVLLDLSEPDISINRENPSWDVHIFERYKSVIDAMSSFPNLL 169 (555)
T ss_dssp HHHHHHHHHHTCSEEEECCCCTTSCCHHHHHHHHHTTCEEEEESCBTTBSCCTTSCCCCHHHHHHHHHHHHHHTTCTTEE
T ss_pred HHHHHHHHHcCCCEEEEeccCCCCChHHHHHHHHhcCCEEEEeCCCCCcccccCCHHHHHHHHHHHHHHHHHcCCCCcEE
Confidence 3467899999999999998764 46999999999999998763210011111 222223667788887778899
Q ss_pred EEEecccccCCCc---chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHh-
Q 018955 122 YIAVGNEAKPGDN---FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLN- 197 (348)
Q Consensus 122 ~I~VGNE~l~~~~---~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~- 197 (348)
+..||||+..... ....+.++++.+|+.|++.++. .|||+++.. ++ +.|+ .++++||.
T Consensus 170 ~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R-~IpVgy~~a-d~---------~~~r-------~~la~yl~c 231 (555)
T 2w61_A 170 GYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHR-KIPVGYSTN-DD---------AMTR-------DNLARYFVC 231 (555)
T ss_dssp EEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSC-CCCEEEEEC-CC---------TTTH-------HHHHHHTTB
T ss_pred EEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCC-cceeecccc-cc---------chhh-------HHHHHHhcc
Confidence 9999999997522 4678999999999999999875 499999863 11 1122 35677775
Q ss_pred --hcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCC
Q 018955 198 --ENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTA 275 (348)
Q Consensus 198 --~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~ 275 (348)
+..|++++|.||++.+. .|+. . .|..+++ .. .+ .++||+++|+|||+.
T Consensus 232 ~~~~~D~~~~N~Y~w~g~s----------~f~~-------s--g~~~~~~----~~------~~-~~~Pi~vsEyG~~~~ 281 (555)
T 2w61_A 232 GDVKADFYGINMYEWCGYS----------TYGT-------S--GYRERTK----EF------EG-YPIPVFFSEFGCNLV 281 (555)
T ss_dssp TTCCCSCEEEEECCCCSSC----------CHHH-------H--SHHHHHH----HH------TT-CSSCEEEEEECCCSS
T ss_pred CCCCcCEEEEeCCcccccc----------cccc-------h--hHHHHHH----Hh------hC-CCCCEEEEeCCCccC
Confidence 78999999999976532 1211 0 1223222 11 13 479999999999995
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC--CCeeeeccc
Q 018955 276 GGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT--RQPRYQINF 347 (348)
Q Consensus 276 G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d--~~~ky~l~~ 347 (348)
+ ++ ...++++.|.+++ ... .. .-|+|+.||| |++||||+.| ++.+|..+|
T Consensus 282 ~-pg--~~~E~~a~y~~~m-~~~------~s----GG~Ife~~dE--------~nnyGLv~~d~~~~~~~~~df 333 (555)
T 2w61_A 282 R-PR--PFTEVSALYGNKM-SSV------WS----GGLAYMYFEE--------ENEYGVVKINDNDGVDILPDF 333 (555)
T ss_dssp S-SC--CCTHHHHHTSHHH-HTT------CC----EEEESCSBCC--------TTCCCSEEECTTSCEEECHHH
T ss_pred C-CC--chHHHHHHHhhcc-ccc------cc----ceEEEEEecc--------cCCccceeecCCCceeechhH
Confidence 3 34 5568888887762 221 11 2489999997 7889999999 566666554
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.5e-16 Score=149.33 Aligned_cols=244 Identities=12% Similarity=0.172 Sum_probs=145.6
Q ss_pred HHHHHHHhhCCCCeEEEe--------cCC-hH---HHHHHhcCCCEEEEecCCCch-----------------hhhhhcH
Q 018955 50 RDVIALYNQNNIRRMRLY--------DPN-RE---ALEALRGSNIEVMLGLPNNDL-----------------RRIASNQ 100 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY--------~~d-~~---vl~A~~~~glkV~lGv~~~~~-----------------~~~a~~~ 100 (348)
.+..++|++.|++.||+. ..+ .. +++.+++.||+|++.+..++. +.+....
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~ 109 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKL 109 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHH
T ss_pred ccHHHHHHHCCCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHH
Confidence 467889999999999996 123 34 555588899999999743211 1111111
Q ss_pred -HHHHHHHHhhccccCCCceEEEEEecccccCC-----Cc--chHHHHHHHHHHHHHHHHcCCCCceEEeeeeecccccc
Q 018955 101 -AEANTWVQNNVRNFANNVKFKYIAVGNEAKPG-----DN--FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGE 172 (348)
Q Consensus 101 -~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~-----~~--~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~ 172 (348)
+...+ +.+.+... ...+..|.||||.... +. ..+.+...++...+++++...++.++|..-... ...
T Consensus 110 ~~yt~~-vl~~l~~~--g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~-~~~- 184 (332)
T 1hjs_A 110 YNYTLD-AANKLQNA--GIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN-GWD- 184 (332)
T ss_dssp HHHHHH-HHHHHHHT--TCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC-TTC-
T ss_pred HHHHHH-HHHHHHHc--CCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCC-ccc-
Confidence 01111 11122221 2346679999997752 11 357788888888888887753234555432210 000
Q ss_pred ccCCCCcccccCccchhhHHHHH-------HhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHH
Q 018955 173 SFPPSRGSFKQDYRPILDPLIRF-------LNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFD 245 (348)
Q Consensus 173 s~pPs~~~f~~d~~~~~~~~l~f-------L~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~d 245 (348)
.+..+...+- .++..|++++|.||||..... + .-+.
T Consensus 185 -------------~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~~~---------------------~---~~l~ 227 (332)
T 1hjs_A 185 -------------WGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSAT---------------------L---SALK 227 (332)
T ss_dssp -------------HHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTTCC---------------------H---HHHH
T ss_pred -------------hHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCCCC---------------------H---HHHH
Confidence 0111111111 123679999999999974210 0 1122
Q ss_pred HHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC----------CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEE
Q 018955 246 AILDAVYAALEKTGGGSLGIVISESGWPTAGGD----------GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIF 315 (348)
Q Consensus 246 a~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~----------~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F 315 (348)
..++.+. ++. +|||+|+|||||+.|+. +...|++.|+.|++.+++.+++ .++ +..+||+
T Consensus 228 ~~l~~~~---~ry---gKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~----~~~-~~G~fyW 296 (332)
T 1hjs_A 228 SSLDNMA---KTW---NKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSS----VSR-GVGLFYW 296 (332)
T ss_dssp HHHHHHH---HHH---CCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----STT-EEEEEEE
T ss_pred HHHHHHH---HHH---CCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHh----cCC-eEEEEEE
Confidence 2233222 232 57999999999997641 1246899999999999999862 344 7889999
Q ss_pred EeecCCCCCCCCCCCceeeecCCCCeeeecc
Q 018955 316 AMFDENGKTGPEIERHWGLFAPTRQPRYQIN 346 (348)
Q Consensus 316 ~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~ 346 (348)
+....+++..+..-.+.|||+.+|+|+-.++
T Consensus 297 ep~w~~~~g~g~~~~~~glfd~~g~p~~a~~ 327 (332)
T 1hjs_A 297 EPAWIHNANLGSSCADNTMFSQSGQALSSLS 327 (332)
T ss_dssp CTTCGGGTTTTSSSSBCCSBCTTSBBCGGGG
T ss_pred ccccccCCCCCCcCCCCceECCCCCCcHHHH
Confidence 8544333321222234599999999998775
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-15 Score=145.43 Aligned_cols=248 Identities=14% Similarity=0.209 Sum_probs=148.4
Q ss_pred HHHHHHHhhCCCCeEEEe------c--CC-h---HHHHHHhcCCCEEEEecCCCch---h-------hhhh-cHHHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLY------D--PN-R---EALEALRGSNIEVMLGLPNNDL---R-------RIAS-NQAEANTW 106 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY------~--~d-~---~vl~A~~~~glkV~lGv~~~~~---~-------~~a~-~~~~a~~w 106 (348)
.+..+++++.|++.||+. + .| . .+++.+++.||+|++++..++. + .... +.++..++
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~~~~~~~~ 109 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQ 109 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHHH
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCChHHHHHH
Confidence 467889999999999995 1 12 2 4667788999999999854321 0 1110 11222222
Q ss_pred HHh----hccccC-CCceEEEEEecccccCC-----Cc--chHHHHHHHHHHHHHHHHcCCCCceEEeeeeecccccccc
Q 018955 107 VQN----NVRNFA-NNVKFKYIAVGNEAKPG-----DN--FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESF 174 (348)
Q Consensus 107 v~~----~v~~~~-~~~~I~~I~VGNE~l~~-----~~--~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~ 174 (348)
+.+ .+..+. .+..+..+.||||.... +. ..+.++.+++...+++++...++..+|..- +..
T Consensus 110 ~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h-----~~~-- 182 (334)
T 1fob_A 110 LYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIH-----LDD-- 182 (334)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEE-----ESC--
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEE-----cCC--
Confidence 221 111110 13467889999997542 11 357889999998888888763334455321 111
Q ss_pred CCCCcccccCccchhhHHHH---HHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHH
Q 018955 175 PPSRGSFKQDYRPILDPLIR---FLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251 (348)
Q Consensus 175 pPs~~~f~~d~~~~~~~~l~---fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~ 251 (348)
|.....|+ .....++. ..++..|++++|.||||..... . .-+..+++.+
T Consensus 183 ~~~~~~~~----~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~-----------------------~-~~l~~~l~~~ 234 (334)
T 1fob_A 183 GWSWDQQN----YFYETVLATGELLSTDFDYFGVSYYPFYSASAT-----------------------L-ASLKTSLANL 234 (334)
T ss_dssp TTCHHHHH----HHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCC-----------------------H-HHHHHHHHHH
T ss_pred cCchHHHH----HHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCC-----------------------H-HHHHHHHHHH
Confidence 10000010 01111110 0123569999999999873210 0 1111222222
Q ss_pred HHHHHHhCCCCccEEEeeeccCCCCCC----------CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCC
Q 018955 252 YAALEKTGGGSLGIVISESGWPTAGGD----------GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDEN 321 (348)
Q Consensus 252 ~~a~~~~g~~~~~v~I~ETGWPS~G~~----------~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~ 321 (348)
.++. +|||+|+|||||+.++. +...|++.|+.|++.+++.++++ ++ +..+|+++. .
T Consensus 235 ---~~ry---gKpv~itEtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~----~~-~~G~f~We~---~ 300 (334)
T 1fob_A 235 ---QSTY---DKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEAT----TD-GLGVYYWEP---A 300 (334)
T ss_dssp ---HHHH---CCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTS----TT-EEEEEEECT---T
T ss_pred ---HHHH---CCCEEEEEcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHhc----CC-ceEEEEECc---c
Confidence 2343 57999999999997751 12478999999999999999732 33 678999988 6
Q ss_pred CCCCCC---CCCceeeecCC-CCeeeecc
Q 018955 322 GKTGPE---IERHWGLFAPT-RQPRYQIN 346 (348)
Q Consensus 322 wK~~~~---~E~~wGl~~~d-~~~ky~l~ 346 (348)
|.+.++ .-.+||||+.+ |+|+-++.
T Consensus 301 w~~~~g~g~~~~~~glfd~~t~~~~~s~~ 329 (334)
T 1fob_A 301 WIGNAGLGSSCADNLMVDYTTDEVYESIE 329 (334)
T ss_dssp CTTCTTTTSSSSBCCSBCTTTCBBCTHHH
T ss_pred cccCCCCCCccCCCCcEeCCCCCCcHHHH
Confidence 765222 34799999998 99987654
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.9e-14 Score=139.29 Aligned_cols=246 Identities=14% Similarity=0.245 Sum_probs=146.7
Q ss_pred HHHHHHHHhhCCCCeEEE-------------ec---CC-hH---HHHHHhcCCCEEEEecCCCch---h-------hhhh
Q 018955 49 KRDVIALYNQNNIRRMRL-------------YD---PN-RE---ALEALRGSNIEVMLGLPNNDL---R-------RIAS 98 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRl-------------Y~---~d-~~---vl~A~~~~glkV~lGv~~~~~---~-------~~a~ 98 (348)
..+..++|+..|++.||+ |+ .| .. +++.+++.||+|+|.+..++. + ....
T Consensus 50 ~~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~P~aW~~ 129 (399)
T 1ur4_A 50 KQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWAN 129 (399)
T ss_dssp BCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTT
T ss_pred cchHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccCcccccc
Confidence 456789999999999998 43 22 24 445677899999999754321 0 1111
Q ss_pred -cHHHHHHHHH-------hhccccCCCceEEEEEecccccCC---CcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeec
Q 018955 99 -NQAEANTWVQ-------NNVRNFANNVKFKYIAVGNEAKPG---DNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIET 167 (348)
Q Consensus 99 -~~~~a~~wv~-------~~v~~~~~~~~I~~I~VGNE~l~~---~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~ 167 (348)
+.++..+++. +.+... ...+..|.||||.-.. ....+.|...++...+++|+..- +++|.+-.
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~--g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p--~~~V~ih~-- 203 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAA--GIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDS--NILVALHF-- 203 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCT--TSEEEEEE--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhc--CCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCC--CCeEEEEe--
Confidence 1122222222 222222 3567899999997552 12356777777777777776642 35664422
Q ss_pred cccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHH
Q 018955 168 GALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAI 247 (348)
Q Consensus 168 ~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~ 247 (348)
.. +...+.|+ ..-..+..+....|++++|.||||... . .-+..+
T Consensus 204 ---~~--~~~~~~~~-----~~~d~l~~~g~d~DvIG~syYp~W~~~-------------------------l-~~l~~~ 247 (399)
T 1ur4_A 204 ---TN--PETSGRYA-----WIAETLHRHHVDYDVFASSYYPFWHGT-------------------------L-KNLTSV 247 (399)
T ss_dssp ---CC--TTSTTHHH-----HHHHHHHHTTCCCSEEEEEECTTTSCC-------------------------H-HHHHHH
T ss_pred ---CC--CcchHHHH-----HHHHHHHHcCCCcCeEeEecCccchhh-------------------------H-HHHHHH
Confidence 11 10001110 011222334446899999999998732 0 112222
Q ss_pred HHHHHHHHHHhCCCCccEEEeeeccCCCCCC---------------CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccE
Q 018955 248 LDAVYAALEKTGGGSLGIVISESGWPTAGGD---------------GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIET 312 (348)
Q Consensus 248 ~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~---------------~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~ 312 (348)
++.+. ++. +|||+|+|||||+.+.. +..+|++.|+.|++.+++.+++- .+ .+..+
T Consensus 248 l~~l~---~ry---gKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s~~gQa~~l~~l~~~v~~~---~~-~g~Gv 317 (399)
T 1ur4_A 248 LTSVA---DTY---GKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDV---GE-AGIGV 317 (399)
T ss_dssp HHHHH---HHH---CCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTT---CT-TEEEE
T ss_pred HHHHH---HHh---CCcEEEEEecCCccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhc---cC-ceEEE
Confidence 33322 222 67999999999996421 11368999999999999988621 12 36789
Q ss_pred EEEE--e------------------ecCCCCC---------------CCCCCCceeeecCCCCeeeecc
Q 018955 313 YIFA--M------------------FDENGKT---------------GPEIERHWGLFAPTRQPRYQIN 346 (348)
Q Consensus 313 f~F~--~------------------fDe~wK~---------------~~~~E~~wGl~~~d~~~ky~l~ 346 (348)
||+| . +...|++ ++..-.+.+||+.+|+++-+|.
T Consensus 318 fyWep~w~~~~~~~~~~~n~~~~~~~g~gw~~~~~~~~~p~~~~~~~~g~~~~n~~lfd~~g~~l~sl~ 386 (399)
T 1ur4_A 318 FYWEPAWIPVGPAHRLEKNKALWETYGSGWATSYAAEYDPEDAGKWFGGSAVDNQALFDFKGRPLPSLH 386 (399)
T ss_dssp EEECTTCCCSSCGGGHHHHHHHHHHHCCSSBCGGGTTTCTTTHHHHCBSCSCGGGCSBCTTSCBCGGGG
T ss_pred EEEccceecccccccccccccccccCCCccccccccccCccccccccCCCccccceeECCCCCCchHHH
Confidence 9888 2 3345543 1234467899999999998775
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.4e-11 Score=115.39 Aligned_cols=242 Identities=12% Similarity=0.172 Sum_probs=139.6
Q ss_pred CCeeeEEecCCCCC--CCCH--HHHHHHHhhCCCCeEEEe---------------cC----C----hHHHHHHhcCCCEE
Q 018955 32 SAQIGVCYGMLGNN--LPSK--RDVIALYNQNNIRRMRLY---------------DP----N----REALEALRGSNIEV 84 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~--~~s~--~~v~~ll~~~~~~~VRlY---------------~~----d----~~vl~A~~~~glkV 84 (348)
.-..||+|+++... +.+. .+.+++|++.|++.|||- +. + ..+++.++..||+|
T Consensus 34 ~~i~Gis~~~~~~~~~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V 113 (343)
T 3civ_A 34 GFIRGMTFGFVGQHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKV 113 (343)
T ss_dssp CCEEEEEESTTCBTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEE
T ss_pred cceeeEEeccccCCCCcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEE
Confidence 45679999987533 2332 234668888999999994 11 2 24566677899999
Q ss_pred EE--------ecCCCch----hhhhhcHHHHHHHHH---hhccccC---CCceEEEEEecccccCCCcchHHHHHHHHHH
Q 018955 85 ML--------GLPNNDL----RRIASNQAEANTWVQ---NNVRNFA---NNVKFKYIAVGNEAKPGDNFAQYLVPAMRNI 146 (348)
Q Consensus 85 ~l--------Gv~~~~~----~~~a~~~~~a~~wv~---~~v~~~~---~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v 146 (348)
+| |.|-..+ +.... ..+..+|+. +.+..|. ....|..++||||..........+.+.++.|
T Consensus 114 ~l~p~i~~~~g~w~g~i~~~~~~~~~-~~~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~~~~~~~~~~~~~Li~~v 192 (343)
T 3civ_A 114 CLKPTVNCRDGTWRGEIRFEKEHGPD-LESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRETIARV 192 (343)
T ss_dssp EEEEEEEETTCCCGGGCCCSBSCCTT-SSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTCHHHHHHHHHHH
T ss_pred EEEEEeeccCCcccccccccCcCCcc-hHHHHHHHHHHHHHHHHHHHHccCCCceEEEECCCCCCCCchHHHHHHHHHHH
Confidence 99 5551110 00000 001111111 1111110 1124789999999987644566677777777
Q ss_pred HHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCcccccc
Q 018955 147 QNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALF 226 (348)
Q Consensus 147 ~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f 226 (348)
|+.. ++ |||++..+ +.. ++ .. |.+..|++++|.|+-|+..
T Consensus 193 R~~~-----~g--~VTya~~~--~~~----------~~-~~--------lw~~~DvIgin~Y~~~~~w------------ 232 (343)
T 3civ_A 193 RTEY-----DG--LVTYNCNH--GRE----------EH-VR--------FWDAVDLISSSAYYPIDRW------------ 232 (343)
T ss_dssp HHHC-----CS--EEEEEEET--TCT----------TT-CS--------CGGGSSEEEEECCCCGGGH------------
T ss_pred HhhC-----CC--CEEEEecC--ccc----------cc-cc--------ccccCCEEEEeccCCchhH------------
Confidence 7762 22 88876322 210 00 00 2356699999999754321
Q ss_pred ccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC---------CCCCCHHHHHHHHHHHHHH
Q 018955 227 RSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD---------GALTNVDNARTYNNNLIQH 297 (348)
Q Consensus 227 ~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~---------~~vas~~na~~y~~~~~~~ 297 (348)
.++. ..++.+. ++. +|||+|+|+|||+..+. ....|.+.|+.|++.+++.
T Consensus 233 --------------~~~~-~~l~~~~---~~~---~KPIiitE~G~~s~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~~~ 291 (343)
T 3civ_A 233 --------------RDRV-PVLREVA---EAH---EKPLFFMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFAA 291 (343)
T ss_dssp --------------HHHH-HHHHHHH---HHH---TCCEEEEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHH
T ss_pred --------------HHHH-HHHHHHH---HHh---CCCEEEEeeCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHH
Confidence 1111 2233332 221 68999999999996651 1157899999999999988
Q ss_pred HHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCee
Q 018955 298 VKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPR 342 (348)
Q Consensus 298 ~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~k 342 (348)
+. ..|. ....|+|...|..+-..+ ..+=|.|+.+|+|-
T Consensus 292 ~~----~~~~-~~G~~vW~w~~~~~~r~~--~~~~~~ft~~~KpA 329 (343)
T 3civ_A 292 MP----DEPW-FKGYMLWEWPWKLYPREA--ASEDGSYCIYGKPA 329 (343)
T ss_dssp SC----CCTT-EEEEEEEEECSSCCCGGG--GGGCCSSCCTTSHH
T ss_pred Hh----cCCC-ccEEEEEEECCCCccccC--cccCCCcCCCCChH
Confidence 74 1222 346777777775433211 12234577788763
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=98.85 E-value=4.1e-08 Score=98.37 Aligned_cols=256 Identities=12% Similarity=0.088 Sum_probs=138.9
Q ss_pred HHHHHHhhCCCCeEEEecC-----------------C----hHHHHHHhcCCCEEEEecCCC--c---------------
Q 018955 51 DVIALYNQNNIRRMRLYDP-----------------N----REALEALRGSNIEVMLGLPNN--D--------------- 92 (348)
Q Consensus 51 ~v~~ll~~~~~~~VRlY~~-----------------d----~~vl~A~~~~glkV~lGv~~~--~--------------- 92 (348)
++..+.+..||++||+-+. | ..++..+.+.||++++-+-.. .
T Consensus 46 ~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y~~~~~D~~~d~~~~~G~~p~~~l~~~P~~~~~~~~~~~~~~~~~ 125 (500)
T 4ekj_A 46 QLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVYDWTKIDQLYDALLAKGIKPFIELGFTPEAMKTSDQTIFYWKGNT 125 (500)
T ss_dssp HHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEECCHHHHHHHHHHHHTTCEEEEEECCBCGGGCSSCCEETTTTEEC
T ss_pred HHHHHHHhcCceEEEECCccccccceeecCCCCeecchHHHHHHHHHHHHCCCEEEEEEeCCchhhcCCCCccccccCCC
Confidence 3444556679999996321 1 368889999999988766321 0
Q ss_pred -hhhhhhcHHHHHHHHHhhccccCC-CceEEEEEecccccCCC----cchHHHHHHHHHHHHHHHHcCCCCceEEeeeee
Q 018955 93 -LRRIASNQAEANTWVQNNVRNFAN-NVKFKYIAVGNEAKPGD----NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 93 -~~~~a~~~~~a~~wv~~~v~~~~~-~~~I~~I~VGNE~l~~~----~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~ 166 (348)
.+....-.+.+.++++.-+.+|.. ...+...-|+||+=..+ .++++..+..+.+.+++|+.. ++++|+.+-.
T Consensus 126 ~~~~~~~w~~~~~~~~~~~~~RYg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y~~l~~~~~~aik~~~--P~~~Vgg~~~ 203 (500)
T 4ekj_A 126 SHPKLGPWRDLIDAFVHHLRARYGVEEVRTWFFEVWNEPNLDGFWEKADQAAYFELYDVTARAIKAID--PSLRVGGPAT 203 (500)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEESSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHC--TTSEEEEEEE
T ss_pred CcccHHHHHHHHHHHHHHHHHhhCccccceeEEEEEECCCCccCCCCCCHHHHHHHHHHHHHHHHhhC--CccccccCcc
Confidence 000111112223333333444411 12344678999985432 257778888888888888875 3578875432
Q ss_pred ccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCccccccccCCceeccCCcchhhH
Q 018955 167 TGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSL 243 (348)
Q Consensus 167 ~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~ 243 (348)
. . ...+...++++.+. .|++.+|.|++.....+. ...... .... ....
T Consensus 204 ~----~-------------~~~~~~fl~~~~~~~~~~D~is~H~Y~~~~~~~~~-~~~~~~-------~~~~----~~~~ 254 (500)
T 4ekj_A 204 A----G-------------AAWVPEFLAHVKKSGSAVDFVTTHTYGVDGGFLDE-KGVQDT-------KLSP----SPDA 254 (500)
T ss_dssp G----G-------------GCSHHHHHHHHHHTTCCCSEEEEEEESEEEEEECT-TSCEEE-------EECC----STTT
T ss_pred C----C-------------ccccHHHHHHHHhcCCccceEEeeccCCCCCCccc-cccccc-------cccc----CHHH
Confidence 1 0 01123344444443 588888888754322110 000000 0000 1122
Q ss_pred HHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEe---ecC
Q 018955 244 FDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAM---FDE 320 (348)
Q Consensus 244 ~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~---fDe 320 (348)
+..+++.+...|++.+.+++||+|+|.||++........+...|....+.+.+... . .....++.. |++
T Consensus 255 ~~~~~~~~r~~l~~~~~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~~~~~-----~---~~~~~~w~~~d~~~~ 326 (500)
T 4ekj_A 255 VVGDVRRVREQIEASAFPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLRRVKG-----L---VQAMSYWTYSDLFEE 326 (500)
T ss_dssp THHHHHHHHHHHHTTTSTTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHHHHTT-----T---CSEEEESCSBSCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHHHhhh-----h---CceeeEEEEEeeecc
Confidence 33456677777788888999999999999987653211333444433333333211 1 112223332 333
Q ss_pred CCCCCCCCCCceeeecCCCCeeeec
Q 018955 321 NGKTGPEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 321 ~wK~~~~~E~~wGl~~~d~~~ky~l 345 (348)
..-+....|.+|||++.|+.||-.+
T Consensus 327 ~~~~~~~~~~~fGll~~~~~pKPay 351 (500)
T 4ekj_A 327 PGPPTAPFQGGFGLMNPQGIRKPSW 351 (500)
T ss_dssp TSSCCSSCSSCSCSBCTTSCBCHHH
T ss_pred cCCCcccccCCCCccccCCCcCcHH
Confidence 3222234789999999999998543
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=8.7e-07 Score=91.78 Aligned_cols=257 Identities=14% Similarity=0.058 Sum_probs=147.1
Q ss_pred eeeEEecCCCCC---CCCHHH---HHHHHhhCCCCeEEEe--cCChHHHHHHhcCCCEEEEecCCCch---hhhh-hcHH
Q 018955 34 QIGVCYGMLGNN---LPSKRD---VIALYNQNNIRRMRLY--DPNREALEALRGSNIEVMLGLPNNDL---RRIA-SNQA 101 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~~---v~~ll~~~~~~~VRlY--~~d~~vl~A~~~~glkV~lGv~~~~~---~~~a-~~~~ 101 (348)
..|+|+-+.... ..+.+. .++++|..|++.||+. -.++..+..|...||-|+.-++.-.. .... ...+
T Consensus 325 l~G~~~h~~~~~~g~~~~~~~~~~d~~~~k~~G~N~vR~~h~p~~~~~~~~cD~~Gi~V~~e~~~~~~~~~~~~~~~~~~ 404 (613)
T 3hn3_A 325 FHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLH 404 (613)
T ss_dssp EEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTTSCCCHHHHHHHHHHTCEEEEECSCBCCCSGGGCCHHHHH
T ss_pred eceeeecCCccccCccCCHHHHHHHHHHHHHcCCCEEEccCCCChHHHHHHHHHCCCEEEEeccccccccccccChHHHH
Confidence 468888654321 234443 4678999999999983 34578999999999999987653211 0000 0112
Q ss_pred HHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCccc
Q 018955 102 EANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSF 181 (348)
Q Consensus 102 ~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f 181 (348)
...+-+++.|.++...-.|..-.+|||..... .....+++.+.+.+++..- .-||+++...+ +
T Consensus 405 ~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~~~---~~~~~~~~~l~~~~k~~Dp--tRpv~~~~~~~-~----------- 467 (613)
T 3hn3_A 405 HHMQVMEEVVRRDKNHPAVVMWSVANEPASHL---ESAGYYLKMVIAHTKSLDP--SRPVTFVSNSN-Y----------- 467 (613)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEESCCTTS---HHHHHHHHHHHHHHHHHCT--TSCEEEEECSC-T-----------
T ss_pred HHHHHHHHHHHHhCCCCeEEEEecccCccccc---chHHHHHHHHHHHHHHhCC--CCCEEEEcccC-c-----------
Confidence 22233445555543333577889999986432 2244566666666666543 35777742110 1
Q ss_pred ccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCC
Q 018955 182 KQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGG 261 (348)
Q Consensus 182 ~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~ 261 (348)
..+ . .....|++++|.|+-|-.... . ++ .+..-+...++.. .++.
T Consensus 468 ~~~---~-------~~~~~Dv~~~n~Y~~wy~~~~-~--~~----------------~~~~~l~~~~~~~---~~~~--- 512 (613)
T 3hn3_A 468 AAD---K-------GAPYVDVICLNSYYSWYHDYG-H--LE----------------LIQLQLATQFENW---YKKY--- 512 (613)
T ss_dssp TTC---S-------SGGGCSSEEEECCBTTTBSTT-C--GG----------------GHHHHHHHHHHHH---HHHH---
T ss_pred ccc---c-------cccccceeEEeccccccCCCc-c--HH----------------HHHHHHHHHHHHH---HHhc---
Confidence 000 0 234569999999995532110 0 00 0111111112211 2232
Q ss_pred CccEEEeeeccCCCCCC----CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCC--CCCCceeee
Q 018955 262 SLGIVISESGWPTAGGD----GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGP--EIERHWGLF 335 (348)
Q Consensus 262 ~~~v~I~ETGWPS~G~~----~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~--~~E~~wGl~ 335 (348)
++||+|+|.|+.+..+. ...-|.+.|..|++...+.+.+- .++. -+..++..+||-.-...+ ..+.++||+
T Consensus 513 ~kPi~isE~G~~~~~g~~~~~~~~~seeyQ~~~~~~~~~~~~~~--~~~~-~~G~~~W~~~Df~~~~~~~~~~~n~kGl~ 589 (613)
T 3hn3_A 513 QKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQK--RRKY-VVGELIWNFADFMTEQSPTRVLGNKKGIF 589 (613)
T ss_dssp CSCEEEEECCCCBCTTCCCSSCCTBSHHHHHHHHHHHHHHHHTT--TTTT-EEEEEESCSBCBCCCCBTTBSSSBCCCSB
T ss_pred CCCEEEEeeCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHHHhh--cccc-eEEEEEEEeeecccccCCCcCCCCcCceE
Confidence 57999999999875441 11246788888888777655310 1232 456667777875433221 246899999
Q ss_pred cCCCCeeeec
Q 018955 336 APTRQPRYQI 345 (348)
Q Consensus 336 ~~d~~~ky~l 345 (348)
+.||+||-..
T Consensus 590 ~~dr~pK~aa 599 (613)
T 3hn3_A 590 TRQRQPKSAA 599 (613)
T ss_dssp CTTSCBCHHH
T ss_pred CCCCCCcHHH
Confidence 9999999653
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-06 Score=91.67 Aligned_cols=242 Identities=16% Similarity=0.121 Sum_probs=142.5
Q ss_pred eeeEEecCCCC---CCCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCc-----------hh
Q 018955 34 QIGVCYGMLGN---NLPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNND-----------LR 94 (348)
Q Consensus 34 ~~Gi~Y~~~~~---~~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~-----------~~ 94 (348)
..|+|+.+... ..++++. .++++|..|++.||++.- ++..+.+|...||.|+..++... .+
T Consensus 285 l~G~n~h~~~~~~G~~~~~~~~~~dl~~~k~~G~N~vR~~h~p~~~~~~~~cD~~Gl~V~~e~~~~~~~~~~~~~~~~~~ 364 (667)
T 3cmg_A 285 LHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAIRLAHYPQATYMYDLMDKHGIVTWAEIPFVGPGGYADKGFVDQA 364 (667)
T ss_dssp CEEEECCSCBTTTBTCCCHHHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEEEEECCCBCCTTSSSCSCCCSH
T ss_pred EEEEEcCcCccccccCCCHHHHHHHHHHHHHCCCCEEEecCCCCCHHHHHHHHHCCCEEEEcccccCcCccccccccCCH
Confidence 46899865421 2345544 467889999999999854 46899999999999999887422 11
Q ss_pred hhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeecccccccc
Q 018955 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESF 174 (348)
Q Consensus 95 ~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~ 174 (348)
.+ .+...+.+++.|..+...-.|..-.+|||....++... .+++.+.+.+++.. +.-+|+++.. +..
T Consensus 365 ~~---~~~~~~~~~~~v~r~rNHPSIi~W~~gNE~~~~~~~~~---~~~~~l~~~vk~~D--ptRpvt~~~~---~~~-- 431 (667)
T 3cmg_A 365 SF---RENGKQQLIELIRQHYNHPSICFWGLFNELKEVGDNPV---EYVKELNALAKQED--PTRPTTSASN---QDG-- 431 (667)
T ss_dssp HH---HHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSSSSCCH---HHHHHHHHHHHHHC--TTSCEEEEEC---CCS--
T ss_pred HH---HHHHHHHHHHHHHHcCCCCEEEEEecccCCCccchhHH---HHHHHHHHHHHHHC--CCCcEEEeCC---CCC--
Confidence 11 12233334445554433335778999999865322222 23344444444432 2346766532 110
Q ss_pred CCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHH
Q 018955 175 PPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAA 254 (348)
Q Consensus 175 pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a 254 (348)
. +....|+++.|.||-|-... . ..+...++..
T Consensus 432 ------------~--------~~~~~Dv~~~n~Y~~wy~~~-----------------~--------~~~~~~~~~~--- 463 (667)
T 3cmg_A 432 ------------N--------LNFITENIAWNRYDGWYGST-----------------P--------KTLATFLDRT--- 463 (667)
T ss_dssp ------------G--------GGGSSSSEEEECCTTTSSSC-----------------T--------HHHHHHHHHH---
T ss_pred ------------c--------cccccCEEEeccccccccCc-----------------h--------hhhHHHHHHH---
Confidence 0 23456999999999653210 0 0111112222
Q ss_pred HHHhCCCCccEEEeeeccCCC---------CC-CC-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCC
Q 018955 255 LEKTGGGSLGIVISESGWPTA---------GG-DG-ALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGK 323 (348)
Q Consensus 255 ~~~~g~~~~~v~I~ETGWPS~---------G~-~~-~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK 323 (348)
.+ .++++|++++|.|+++. |+ .+ ...+.+.|..|.+...+.++ .+|. -...|++..||....
T Consensus 464 -~~-~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~~~~~~e~~q~~~~~~~~~~~~----~~~~-~~G~fvW~~~D~~~~ 536 (667)
T 3cmg_A 464 -HK-KHPELRIGISEYGAGASIYHQQDSLKQPSASGWWHPENWQTYYHMENWKIIA----ERPF-VWGTFVWNMFDFGAA 536 (667)
T ss_dssp -HH-HCTTCCEEEEEECCCCBTTCCCSSCCCCCTTSSCCBHHHHHHHHHHHHHHHH----TCTT-CCCEEESCSBCEECT
T ss_pred -HH-HCCCCcEEEEEECCCCCcccccccccccccccccCcHHHHHHHHHHHHHHHh----cCCC-cEEEEEeeeeccCCc
Confidence 11 25789999999999775 21 11 12456677777777777664 2343 456788899987654
Q ss_pred CC--CC--CCCceeeecCCC-Ceee
Q 018955 324 TG--PE--IERHWGLFAPTR-QPRY 343 (348)
Q Consensus 324 ~~--~~--~E~~wGl~~~d~-~~ky 343 (348)
.. ++ ...++||++.|| .+|-
T Consensus 537 ~~~~g~~~~~~~~Gl~~~dr~~~k~ 561 (667)
T 3cmg_A 537 HRTEGDRPGINDKGLVTFDRKVRKD 561 (667)
T ss_dssp TCCCTTSTTEECCCSBCTTSCCBCH
T ss_pred cccCCCCCCcccceeEccCCccCch
Confidence 31 11 224689999999 5554
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=98.69 E-value=5.1e-06 Score=86.03 Aligned_cols=256 Identities=14% Similarity=0.063 Sum_probs=148.9
Q ss_pred eeeEEecCCCCC---CCCH---HHHHHHHhhCCCCeEEEe--cCChHHHHHHhcCCCEEEEecCCCc-------------
Q 018955 34 QIGVCYGMLGNN---LPSK---RDVIALYNQNNIRRMRLY--DPNREALEALRGSNIEVMLGLPNND------------- 92 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~---~~v~~ll~~~~~~~VRlY--~~d~~vl~A~~~~glkV~lGv~~~~------------- 92 (348)
..|+|+-+.... ..+. .+.++++|..|++.||+. -.++..+.+|...||-|+.-++...
T Consensus 292 l~G~~~h~~~~~~g~~~~~~~~~~di~l~k~~g~N~vR~~hyp~~~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~~~~ 371 (605)
T 3lpf_A 292 FTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEAGN 371 (605)
T ss_dssp EEEEEECSCCTTTTTCCCHHHHHHHHHHHHHHTCCEEEECSSCCCHHHHHHHHHHTCEEEEECSCBCCCSSCCCSCCCCC
T ss_pred EEeeecCcCcccccccCCHHHHHHHHHHHHHCCCcEEEecCCCCcHHHHHHHHhcCCEEEEecccccccccccccccccc
Confidence 568998665422 2344 345678999999999994 3457899999999999998775310
Q ss_pred hh--hh------hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeee
Q 018955 93 LR--RI------ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTA 164 (348)
Q Consensus 93 ~~--~~------a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~ 164 (348)
.+ .. ..-.+...+-+++.|.++..--.|..=++|||.-...... ...++.+.+.+++.. +.-+|+.+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~~~~~~---~~~~~~l~~~~k~~D--ptRpvt~~ 446 (605)
T 3lpf_A 372 KPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQGA---REYFAPLAEATRKLD--PTRPITCV 446 (605)
T ss_dssp CCSCSSSTTTSCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCCCSTTH---HHHHHHHHHHHHHHC--SSSCEEEE
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCcccccccchH---HHHHHHHHHHHHHHC--CCCcEEEe
Confidence 00 00 0111223333445555543333577889999986532222 234444444444432 23466654
Q ss_pred eeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHH
Q 018955 165 IETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLF 244 (348)
Q Consensus 165 ~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~ 244 (348)
... +... ..+ . +++..|+++.|.|+=|=.... + .. .....+
T Consensus 447 ~~~--~~~~-------~~d----~-------~~~~~Dvig~N~Y~gwY~~~g-----~----------~~----~~~~~l 487 (605)
T 3lpf_A 447 NVM--FCDA-------HTD----T-------ISDLFDVLCLNRYYGWYVQSG-----D----------LE----TAEKVL 487 (605)
T ss_dssp EET--TSCT-------TTC----S-------SGGGSSSEEEECCBTTTBSTT-----C----------HH----HHHHHH
T ss_pred ccc--cCcc-------ccc----c-------cccccceeeeccccccccCCC-----c----------hH----HHHHHH
Confidence 311 1100 111 1 234459999999985421100 0 00 001122
Q ss_pred HHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC---CC-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecC
Q 018955 245 DAILDAVYAALEKTGGGSLGIVISESGWPTAGG---DG-ALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDE 320 (348)
Q Consensus 245 da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~---~~-~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe 320 (348)
+..+... .++ .+|||+++|.|.-+.-+ .+ ..=|.+.|..|++...+.+. .+|. -+..|+..+||-
T Consensus 488 ~~~~~~w---~~~---~~KPiiisEyGa~~~~g~h~~~~~~~sEeyq~~~~~~~~~~~~----~~~~-~~G~~iW~~~Df 556 (605)
T 3lpf_A 488 EKELLAW---QEK---LHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFD----RVSA-VVGEQVWNFADF 556 (605)
T ss_dssp HHHHHHH---HHH---HCCCEEEEECCCCCCTTCCCSSCCTTSHHHHHHHHHHHHHHHT----TCTT-EEEEEEEEEECB
T ss_pred HHHHHHH---hhc---cCCCeEEEeeCCCCCcCcccCCCCCCCHHHHHHHHHHHHHHHh----cCCc-EEEEEEEEeeee
Confidence 2211111 122 46899999999887543 11 12478889999888888875 2342 567899999998
Q ss_pred CCCCCC--CCCCceeeecCCCCeeee
Q 018955 321 NGKTGP--EIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 321 ~wK~~~--~~E~~wGl~~~d~~~ky~ 344 (348)
....+. .-+.+.|||+.||+||-.
T Consensus 557 ~~~~~~~~~~~n~kGl~t~dr~pK~a 582 (605)
T 3lpf_A 557 ATSQGILRVGGNKKGIFTRDRKPKSA 582 (605)
T ss_dssp CBCCBTTBSSSBCCEEECTTCCBCTH
T ss_pred cCccCCccccCCCCccccCCCCCcHH
Confidence 765432 247899999999999964
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-06 Score=82.37 Aligned_cols=249 Identities=12% Similarity=0.120 Sum_probs=133.0
Q ss_pred CeeeEE--ecCCCCCCCCH---HHHHHHHhhCCCCeEEEecCC---------------------------------hHHH
Q 018955 33 AQIGVC--YGMLGNNLPSK---RDVIALYNQNNIRRMRLYDPN---------------------------------REAL 74 (348)
Q Consensus 33 ~~~Gi~--Y~~~~~~~~s~---~~v~~ll~~~~~~~VRlY~~d---------------------------------~~vl 74 (348)
...|+| |.+.. +++ .+.++++|+.|++.||++... ..++
T Consensus 20 ~~~G~n~~~~~~~---~~~~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i 96 (344)
T 1qnr_A 20 YFAGTNCYWCSFL---TNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVV 96 (344)
T ss_dssp CEEEEECGGGGGC---CCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHH
T ss_pred EEEEEeccccccc---CCHHHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHH
Confidence 356888 44432 234 445678899999999996311 2688
Q ss_pred HHHhcCCCEEEEecCCC-----chh-----------hhhhcH---HHHHHHHHhhccccCCCceEEEEEecccccCCCcc
Q 018955 75 EALRGSNIEVMLGLPNN-----DLR-----------RIASNQ---AEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNF 135 (348)
Q Consensus 75 ~A~~~~glkV~lGv~~~-----~~~-----------~~a~~~---~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~ 135 (348)
..|.+.||+|++.+.+. ..+ .+-.++ +...+.++.-+.+|.....|....+|||+-.....
T Consensus 97 ~~a~~~Gi~vild~~~~w~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~ 176 (344)
T 1qnr_A 97 QSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCS 176 (344)
T ss_dssp HHHHHHTCEEEEESCBSSSTTSHHHHHHHHHCSCTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCC
T ss_pred HHHHHCCCEEEEEeccCccccCCHHHHHHHhCCChhhhcCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCC
Confidence 88999999999998542 011 011121 22233344444455333468889999999753334
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccc---cccCCCCcccccCccchhhHHHHHHhhcCCccccccccccc
Q 018955 136 AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALG---ESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA 212 (348)
Q Consensus 136 ~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~---~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~ 212 (348)
.+.+...++.+.+++++..- +.+|++......+. ..+| -.. + .. .+... ....+..|++.+|.||..-
T Consensus 177 ~~~~~~~~~~~~~~ir~~dp--~~~v~~g~~~~~~~~~~~~~~-~~~-~-~g-~d~~~---~~~~~~~D~~s~h~Y~~~~ 247 (344)
T 1qnr_A 177 TDVIVQWATSVSQYVKSLDS--NHLVTLGDEGLGLSTGDGAYP-YTY-G-EG-TDFAK---NVQIKSLDFGTFHLYPDSW 247 (344)
T ss_dssp THHHHHHHHHHHHHHHHHCS--SSEEECCCCCCCCTTSCCCGG-GSS-S-SS-CCHHH---HHTCTTCCSEEEEECHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCC--CCEEEECCccccCCCCCccCC-ccc-c-cc-CcHHH---HhCCCCCCeEEeeeCCCcc
Confidence 56677788888888887643 35666532110011 0111 000 0 00 01111 1134567999999999531
Q ss_pred ccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHH
Q 018955 213 IAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNN 292 (348)
Q Consensus 213 ~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~ 292 (348)
... . + | ....+....+. .++ .++||+|+|.|++..+. . ..+.|.+
T Consensus 248 ~~~-~----~---~-------------~~~~~~~~~~~----~~~---~~kPv~l~E~G~~~~~~------~-~~~~~~~ 292 (344)
T 1qnr_A 248 GTN-Y----T---W-------------GNGWIQTHAAA----CLA---AGKPCVFEEYGAQQNPC------T-NEAPWQT 292 (344)
T ss_dssp TCC-S----T---H-------------HHHHHHHHHHH----HHH---TTSCEEEEEECCSSCHH------H-HHHHHHH
T ss_pred Ccc-c----h---H-------------HHHHHHHHHHH----HHH---cCCCEEEeecCCCCCCC------c-hHHHHHH
Confidence 110 0 0 0 01222222221 122 36899999999985421 1 2233433
Q ss_pred HHHHHHHhcCCCCCCCCc-cEEEEEeecCCCCCC-CCCCCceeeecCCC
Q 018955 293 NLIQHVKRGSPKRPGRPI-ETYIFAMFDENGKTG-PEIERHWGLFAPTR 339 (348)
Q Consensus 293 ~~~~~~~~gtp~~~~~~~-~~f~F~~fDe~wK~~-~~~E~~wGl~~~d~ 339 (348)
.++ + .+ ++ ..++++.-|. ...+ ......|||+..|+
T Consensus 293 ~~~---~-----~~--~~~g~~~W~~~d~-~~~g~~~~~~~~~i~~~~~ 330 (344)
T 1qnr_A 293 TSL---T-----TR--GMGGDMFWQWGDT-FANGAQSNSDPYTVWYNSS 330 (344)
T ss_dssp HHH---T-----ST--TEEEEEESCEECB-CTTSCBCCCCTTCEETTSH
T ss_pred HHH---h-----cC--CCCceEEEeccCC-CCCCCccCCCCcEEEeCCc
Confidence 322 1 11 33 5566666442 3333 23566799999886
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=8.8e-06 Score=76.95 Aligned_cols=254 Identities=9% Similarity=0.103 Sum_probs=134.8
Q ss_pred eeeEEecCCCCC-------CCCHHHHHHHHhhCCCCeEEE-------------ecCCh-------HHHHHHhcCCCEEEE
Q 018955 34 QIGVCYGMLGNN-------LPSKRDVIALYNQNNIRRMRL-------------YDPNR-------EALEALRGSNIEVML 86 (348)
Q Consensus 34 ~~Gi~Y~~~~~~-------~~s~~~v~~ll~~~~~~~VRl-------------Y~~d~-------~vl~A~~~~glkV~l 86 (348)
..|+|++..-+. .+.-++.++++|+.|++.||+ |..++ .++..+.+.||+|+|
T Consensus 21 ~~G~Nlg~~~~~~~~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vil 100 (320)
T 3nco_A 21 GHGINMGNALEAPVEGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVII 100 (320)
T ss_dssp CEEEECCSSTTSSSTTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCccccCccccCCCCCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 579999754321 122367888999999999998 23332 678889999999999
Q ss_pred ecCCCchhh--hhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeee
Q 018955 87 GLPNNDLRR--IASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTA 164 (348)
Q Consensus 87 Gv~~~~~~~--~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~ 164 (348)
.+......- -....+...+..+.-+..|.....|.+.-++||+... .....+.++++.+-+++++.+-...|-|++.
T Consensus 101 dlh~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~NEP~~~-~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~ 179 (320)
T 3nco_A 101 NCHHFEELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQN-LTPTKWNELYPKVLGEIRKTNPSRIVIIDVP 179 (320)
T ss_dssp ECCCCHHHHHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCTT-SCHHHHHHHHHHHHHHHHHHCSSCCEEEECS
T ss_pred EcCCCcccccCcHHHHHHHHHHHHHHHHHHcCCCceEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCcEEEECCC
Confidence 998643210 0011222222223333334222345589999999754 2455667777777777777765444555433
Q ss_pred eeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCce--ec-cCCcchh
Q 018955 165 IETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTV--VS-DGSLSYR 241 (348)
Q Consensus 165 ~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~--~~-d~~~~y~ 241 (348)
. ++... .+.. + .. .....+.+.+|.|.-|...... +.+..+... .. .+.....
T Consensus 180 ~-~~~~~--------~~~~-~-~~-------~~~~~~v~~~H~Y~~~~~~~~~------~~w~~~~~~~~~~w~g~~~~~ 235 (320)
T 3nco_A 180 N-WSNYS--------YVRE-L-KL-------VDDKNIIVSFHYYEPFNFTHQG------AEWVSPTLPIGVKWEGKDWEV 235 (320)
T ss_dssp G-GGBGG--------GGGG-C-CC-------CSCTTEEEEEEECCSHHHHTTT------CTTSSSCCCSCCCCCCCHHHH
T ss_pred C-cCchh--------HHhc-C-CC-------CCCCCeEEEEEecCCeeeEecc------ccccCCCCCCCCCCCCchhhH
Confidence 2 11110 0000 0 00 0123456777878655432110 000000000 00 0000011
Q ss_pred hHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCC
Q 018955 242 SLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDEN 321 (348)
Q Consensus 242 n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~ 321 (348)
..++..++.+..-.++. ++||+|+|.|-... ...+.+..|++.+++.+++ .++...+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~---g~Pv~igEfG~~~~------~~~~~~~~~~~~~~~~~~~-------~gi~~~~W~~---- 295 (320)
T 3nco_A 236 EQIRNHFKYVSEWAKKN---NVPIFLGEFGAYSK------ADMESRVKWTKTVRRIAEE-------FGFSLAYWEF---- 295 (320)
T ss_dssp HHHHHHHHHHHHHHHHH---TCCEEEEEECCCTT------SCHHHHHHHHHHHHHHHHH-------TTCEEEESCS----
T ss_pred HHHHHHHHHHHHHHHHc---CCCEEEeeeeeecC------CCHHHHHHHHHHHHHHHHH-------cCCeEEEEec----
Confidence 23333444433333343 57999999997643 3456677888888888752 2455544321
Q ss_pred CCCCCCCCCceeeecCCC
Q 018955 322 GKTGPEIERHWGLFAPTR 339 (348)
Q Consensus 322 wK~~~~~E~~wGl~~~d~ 339 (348)
+ ..|||++.+.
T Consensus 296 -~------~~fG~~d~~~ 306 (320)
T 3nco_A 296 -C------AGFGLYDRWT 306 (320)
T ss_dssp -S------GGGCSEETTT
T ss_pred -C------CCcceeeCCC
Confidence 2 2388887654
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.51 E-value=5.3e-06 Score=79.88 Aligned_cols=253 Identities=10% Similarity=0.113 Sum_probs=132.7
Q ss_pred HHHHHHHhhCCCCeEEEecC---------------C-------hHHHHHHhcCCCEEEEecCCC-----ch---hh----
Q 018955 50 RDVIALYNQNNIRRMRLYDP---------------N-------REALEALRGSNIEVMLGLPNN-----DL---RR---- 95 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~---------------d-------~~vl~A~~~~glkV~lGv~~~-----~~---~~---- 95 (348)
.+.++++|+.|++.||++.- + ..+|..|.+.||+|++.+.+. .. +.
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~~ 124 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 124 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHhh
Confidence 44677889999999999621 1 146788889999999987641 11 00
Q ss_pred ----------hhhc---HHHHHHHHHhhccc--------cCCCceEEEEEecccccCCCc-chHHHHHHHHHHHHHHHHc
Q 018955 96 ----------IASN---QAEANTWVQNNVRN--------FANNVKFKYIAVGNEAKPGDN-FAQYLVPAMRNIQNAINAA 153 (348)
Q Consensus 96 ----------~a~~---~~~a~~wv~~~v~~--------~~~~~~I~~I~VGNE~l~~~~-~~~~Ll~~i~~v~~~L~~~ 153 (348)
+-.+ .+...++++.-+.. |.....|.+..++||+-.... ..+.+.++++.+.+++++.
T Consensus 125 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~ 204 (373)
T 1rh9_A 125 RGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSI 204 (373)
T ss_dssp TTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHhh
Confidence 0011 22333344444444 432347889999999976432 3467778888888888876
Q ss_pred CCCCceEEeeeeecccccccc---CCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCC
Q 018955 154 GLGNQIKVSTAIETGALGESF---PPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQ 230 (348)
Q Consensus 154 gl~~~I~VsT~~~~~~~~~s~---pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~ 230 (348)
.- +.+|++.... .+..+. .| +.+... .+.+. .......|++.+|.||..-.. .. + +
T Consensus 205 dp--~~~v~~g~~g-~~~~~~~~~~~--~~~~~~-~d~~~---~~~~~~~D~~s~H~Y~~~~~~-~~----~---~---- 263 (373)
T 1rh9_A 205 DS--NHLLEIGLEG-FYGNDMRQYNP--NSYIFG-TNFIS---NNQVQGIDFTTIHMYPNQWLP-GL----T---Q---- 263 (373)
T ss_dssp CC--SSEEECCCCC-CCCGGGGGGSG--GGCCCS-CCHHH---HHTSTTCCCEEEECCHHHHST-TS----C---H----
T ss_pred CC--CceEEeCccc-ccCCCCCcCCc--cccccc-cchhh---hccCCCcCeEEEeeCCcccCC-CC----C---H----
Confidence 43 4577765321 111100 01 011000 01111 112355799999999832100 00 0 0
Q ss_pred ceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 018955 231 TVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPI 310 (348)
Q Consensus 231 ~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~ 310 (348)
+.. ..+....+.......++. +|||+|+|.|+++.. .+ .+.+.+..|++...+.+.+-. .+.+...
T Consensus 264 ----~~~---~~~~~~~l~~~~~~~~~~---~kP~~i~E~G~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 329 (373)
T 1rh9_A 264 ----EAQ---DKWASQWIQVHIDDSKML---KKPLLIAEFGKSTKT-PG--YTVAKRDNYFEKIYGTIFNCA-KSGGPCG 329 (373)
T ss_dssp ----HHH---HHHHHHHHHHHHHHHHHH---TSCEEEEECCCCTTS-TT--CCHHHHHHHHHHHHHHHHHHH-HTTCSEE
T ss_pred ----HHH---HHHHHHHHHHHHHHHHhc---CCCEEEEecCCCCCC-CC--CCHHHHHHHHHHHHHHHHHHh-hcCCCce
Confidence 000 011111111111111232 579999999998765 34 567778888776554432000 0101124
Q ss_pred cEEEEEeecCCCCCCCCCCCceeeecCCCC
Q 018955 311 ETYIFAMFDENGKTGPEIERHWGLFAPTRQ 340 (348)
Q Consensus 311 ~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~ 340 (348)
.++++++-|+-. +..|..|||+..++.
T Consensus 330 G~~~W~~~~~~~---~~~~d~f~i~~~~~~ 356 (373)
T 1rh9_A 330 GGLFWQVLGQGM---SSFDDGYQVVLQESP 356 (373)
T ss_dssp EEEESCBCCTTC---GGGCCSCCBCGGGCH
T ss_pred eEeeeecCCCCC---CCCCCCcEEEcCCCh
Confidence 455555555421 224667999987643
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1e-05 Score=76.08 Aligned_cols=236 Identities=11% Similarity=0.105 Sum_probs=123.6
Q ss_pred eeeEEec-CCCC----C--CCCHHHHHHHHhhCCCCeEEEe-------------cCC-------hHHHHHHhcCCCEEEE
Q 018955 34 QIGVCYG-MLGN----N--LPSKRDVIALYNQNNIRRMRLY-------------DPN-------REALEALRGSNIEVML 86 (348)
Q Consensus 34 ~~Gi~Y~-~~~~----~--~~s~~~v~~ll~~~~~~~VRlY-------------~~d-------~~vl~A~~~~glkV~l 86 (348)
..|||++ .... . .+-.++.++++++.|++.||+- ..+ ..++..+.+.||+|+|
T Consensus 13 ~~GvN~~~~~~~~~~~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vil 92 (317)
T 3aof_A 13 GRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVI 92 (317)
T ss_dssp CEEEECCSSTTSSSTTTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cccCcccccccCCCCCcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5699998 3321 1 1223667888899999999993 112 2477888899999999
Q ss_pred ecCCCchhhh--hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeee
Q 018955 87 GLPNNDLRRI--ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTA 164 (348)
Q Consensus 87 Gv~~~~~~~~--a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~ 164 (348)
.+.......- ....+...+.++.-+..|.....|.+.-+.||+... .....+.++++.+-+++++.+-..-|-|+..
T Consensus 93 d~h~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~-~~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~ 171 (317)
T 3aof_A 93 NIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNAPHGN-LTPEKWNELLEEALKVIRSIDKKHTIIIGTA 171 (317)
T ss_dssp ECCCCHHHHHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCTT-SCHHHHHHHHHHHHHHHHHHCSSSCEEECCS
T ss_pred EecCCccccCCcHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhhCCCCEEEECCC
Confidence 9876432110 011222223233333344222246689999999753 2456677777777777777654322334322
Q ss_pred eeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHH
Q 018955 165 IETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLF 244 (348)
Q Consensus 165 ~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~ 244 (348)
. |.. . . .+.. +. .| .....+.+.+|.|+.|..... .-+.........+ +.-+...-...+
T Consensus 172 ~----~~~-~-~---~~~~-~~---~p----~~~~~~v~~~H~Y~~~~~~~~-~~~w~~~~~~~~~--~~~g~~~~~~~~ 231 (317)
T 3aof_A 172 E----WGG-I-S---ALEK-LS---VP----KWEKNSIVTIHYYNPFEFTHQ-GAEWVEGSEKWLG--RKWGSPDDQKHL 231 (317)
T ss_dssp G----GGS-S-T---TGGG-CC---CC----TTCCSEEEEEECCCSHHHHTT-TCTTSTTGGGGTT--CCCCCHHHHHHH
T ss_pred C----cCc-H-h---HHhh-Cc---CC----CCCCCEEEEEeccCCcccccC-CCCCcCcccccCC--cCcCcHHHHHHH
Confidence 1 211 0 0 0100 00 00 012356788888865543211 0000000000000 000000011344
Q ss_pred HHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018955 245 DAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVK 299 (348)
Q Consensus 245 da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~ 299 (348)
+.+++.+...+++. ++||+|+|.|+++. .+.+.+..|++.+++.++
T Consensus 232 ~~~~~~~~~~~~~~---g~Pv~igEfG~~~~------~~~~~~~~~~~~~~~~~~ 277 (317)
T 3aof_A 232 IEEFNFIEEWSKKN---KRPIYIGEFGAYRK------ADLESRIKWTSFVVREME 277 (317)
T ss_dssp HHHHHHHHHHHHHH---TCCEEEEECCCCTT------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc---CCCEEEeeccccCC------CCHHHHHHHHHHHHHHHH
Confidence 45555554444443 57999999999864 345667788888888775
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=8.1e-06 Score=82.16 Aligned_cols=254 Identities=13% Similarity=0.097 Sum_probs=136.9
Q ss_pred HHHHHHHh-hCCCCeEEEecC---------------C----------hHHHHHHhcCCCEEEEecCCCchhhhh------
Q 018955 50 RDVIALYN-QNNIRRMRLYDP---------------N----------REALEALRGSNIEVMLGLPNNDLRRIA------ 97 (348)
Q Consensus 50 ~~v~~ll~-~~~~~~VRlY~~---------------d----------~~vl~A~~~~glkV~lGv~~~~~~~~a------ 97 (348)
.+.+++++ ..|++.||+... . ..++..+.+.||++++.+...- ..+.
T Consensus 36 ~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~n~~~~D~~~~~~~~~Gi~p~v~l~~~P-~~~~~~~~~~ 114 (503)
T 1w91_A 36 LDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYNFTYIDRIVDSYLALNIRPFIEFGFMP-KALASGDQTV 114 (503)
T ss_dssp HHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEECCHHHHHHHHHHHHTTCEEEEEECSBC-GGGBSSCCEE
T ss_pred HHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceeeccHHHHHHHHHHHHCCCEEEEEEcCCc-HHHhCCCCce
Confidence 44455565 799999998721 1 2578889999999999876310 0010
Q ss_pred ----------hcHHHHH----HHHHhhccccCCCceEE--EEEecccccCCC---c-chHHHHHHHHHHHHHHHHcCCCC
Q 018955 98 ----------SNQAEAN----TWVQNNVRNFANNVKFK--YIAVGNEAKPGD---N-FAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 98 ----------~~~~~a~----~wv~~~v~~~~~~~~I~--~I~VGNE~l~~~---~-~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
++.+.-. +.++.-..+| +...|+ ...|+||+-..+ . .+++.....+....++++.. +
T Consensus 115 ~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ry-g~~~V~~W~wev~NEp~~~~~~~~~~~~~y~~~~~~~~~~ik~~~--P 191 (503)
T 1w91_A 115 FYWKGNVTPPKDYNKWRDLIVAVVSHFIERY-GIEEVRTWLFEVWNEPNLVNFWKDANKQEYFKLYEVTARAVKSVD--P 191 (503)
T ss_dssp TTTTEECSCBSCHHHHHHHHHHHHHHHHHHH-CHHHHHTSEEEECSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHC--T
T ss_pred eecCCCCCCccCHHHHHHHHHHHHHHHHhhc-CchhhceeeEEEeeCCCCccCCCCCCHHHHHHHHHHHHHHHHHhC--C
Confidence 1112211 1122222333 322288 899999986531 1 45556666666777777653 3
Q ss_pred ceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhh---cCCcccccccccccccCCCCCCccccccccCCceec
Q 018955 158 QIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNE---NRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVS 234 (348)
Q Consensus 158 ~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~---~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~ 234 (348)
+++|+.+-.... . ...+..+++++.+ ..|++++|.|+......+. + ...+.
T Consensus 192 ~~~vggp~~~~~------------~---~~w~~~~l~~~~~~g~~~D~is~H~Y~~~~~~~~~--~--~~~~~------- 245 (503)
T 1w91_A 192 HLQVGGPAICGG------------S---DEWITDFLHFCAERRVPVDFVSRHAYTSKAPHKKT--F--EYYYQ------- 245 (503)
T ss_dssp TCEEEEEEECSS------------C---THHHHHHHHHHHHTTCCCCEEEEEEECBCSCSEEC--S--SCEEC-------
T ss_pred CCeEEeeeccCC------------c---hHHHHHHHHHHHhCCCCCCEEEEeecCCCcccccc--c--ccccc-------
Confidence 477765432110 0 1233455555544 5799999999864320000 0 00000
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHH-HHHHHHHHhcCCCCCCCCcc-E
Q 018955 235 DGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYN-NNLIQHVKRGSPKRPGRPIE-T 312 (348)
Q Consensus 235 d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~-~~~~~~~~~gtp~~~~~~~~-~ 312 (348)
...+...+...+..+...+++.+.+++||+|+|.|+++.+... ......+..|. +.+.++.. .+. +
T Consensus 246 --~~~~~~~~~~~i~~~~~~~~~~~~~~~pi~itE~g~~~~~~~~-~~d~~~~A~~~~~~l~~~~~---------~v~~~ 313 (503)
T 1w91_A 246 --ELEPPEDMLEQFKTVRALIRQSPFPHLPLHITEYNTSYSPINP-VHDTALNAAYIARILSEGGD---------YVDSF 313 (503)
T ss_dssp --CBCCHHHHHHHHHHHHHHHHTSSSTTCCEEEEEEESCSCTTCG-GGGSHHHHHHHHHHHHHGGG---------TCSEE
T ss_pred --ccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEeccCCCCCCCCC-cccHHHhHHHHHHHHHHHhh---------hhheE
Confidence 0012233445566666667776777899999999999865321 11222233443 33433321 122 3
Q ss_pred EEEEeec---CCCCCCCCCCCceeeecCCCCeeeec
Q 018955 313 YIFAMFD---ENGKTGPEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 313 f~F~~fD---e~wK~~~~~E~~wGl~~~d~~~ky~l 345 (348)
.++.+.| +.|.+....+.+|||++.|+.||-..
T Consensus 314 ~~w~~~D~~e~~~~~~~~~~~~fGLl~~~~~pKPay 349 (503)
T 1w91_A 314 SYWTFSDVFEEMDVPKALFHGGFGLVALHSIPKPTF 349 (503)
T ss_dssp EESCSBSCCCTTSSCSSSSSSCCCSEEGGGEECHHH
T ss_pred EEEEEeccccccCCCCccccCCcccCCCCCccChHH
Confidence 3444444 33333223566899999999988643
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.4e-06 Score=78.51 Aligned_cols=265 Identities=12% Similarity=0.094 Sum_probs=136.6
Q ss_pred eeeEE--ecCCCCCCCCHHH---HHHHHhhCCCCeEEEecC---------------------------------------
Q 018955 34 QIGVC--YGMLGNNLPSKRD---VIALYNQNNIRRMRLYDP--------------------------------------- 69 (348)
Q Consensus 34 ~~Gi~--Y~~~~~~~~s~~~---v~~ll~~~~~~~VRlY~~--------------------------------------- 69 (348)
+.|+| |.++ .+.++ .++.+++.|++.||++..
T Consensus 23 ~~G~N~~~~~~----~~~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (387)
T 4awe_A 23 FAGSNAYYFPF----NDQPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTI 98 (387)
T ss_dssp EEEEECTTGGG----SCHHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEE
T ss_pred EEEEccCcCCC----CCHHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchh
Confidence 56888 4333 34444 467888899999999741
Q ss_pred ----ChHHHHHHhcCCCEEEEecCCCch-----------------hhhhhc---HHHHHHHHHhhccccCCCceEEEEEe
Q 018955 70 ----NREALEALRGSNIEVMLGLPNNDL-----------------RRIASN---QAEANTWVQNNVRNFANNVKFKYIAV 125 (348)
Q Consensus 70 ----d~~vl~A~~~~glkV~lGv~~~~~-----------------~~~a~~---~~~a~~wv~~~v~~~~~~~~I~~I~V 125 (348)
...++..+++.||+|++.+++... ..+..+ ++...+.++.-+..+.....|.+..+
T Consensus 99 ~~~~~d~~~~~a~~~gi~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~I~~w~l 178 (387)
T 4awe_A 99 DVSPFDKVVDSATKTGIKLIVALTNNWADYGGMDVYTVNLGGKYHDDFYTVPKIKEAFKRYVKAMVTRYRDSEAILAWEL 178 (387)
T ss_dssp CCGGGHHHHHHHHHHTCEEEEECCBSSSTTCCHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHHHHTTCTTEEEEES
T ss_pred hhhhHHHHHHHHHHcCCEEEEeecccccccCCCcccccccccccccccccCHHHHHHHHHHHHHHHhhcCCCcceeEecc
Confidence 135788899999999999875310 001111 12333344444555543456889999
Q ss_pred cccccCCC------------cchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHH
Q 018955 126 GNEAKPGD------------NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLI 193 (348)
Q Consensus 126 GNE~l~~~------------~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l 193 (348)
|||+-... .....+...++.+.+.+++..- +-+|++.... ......+.+...+.. ........
T Consensus 179 ~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~Dp--~~lv~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~ 253 (387)
T 4awe_A 179 ANEARCGADGTRNLPRSEKGCTTETVTGWIEEMSAYVKSLDG--NHLVTWGGEG-GFNRGEDEEDGFYNG--ADGGDFDR 253 (387)
T ss_dssp CBSCCSCCCTTTSCCCCSSSCCHHHHHHHHHHHHHHHHHHCS--SSEEECCCCC-CCBCCC--CCTTTBT--TTSCCHHH
T ss_pred CCCCCCCCCccccccccccccchHHHHHHHHHHHHHHHHhCC--CCcEEEcccc-cccCCCccccccccc--cccccchh
Confidence 99986531 1356677788888888877643 3467654321 111101110000100 00011122
Q ss_pred HHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccC
Q 018955 194 RFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273 (348)
Q Consensus 194 ~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWP 273 (348)
.......|++.+|.||....... .......+........ .+||++++|.|+|
T Consensus 254 ~~~~~~~D~~~~~~y~~~~~~~~-------------------------~~~~~~~~~~~~~~~~---~~kp~~~~E~g~~ 305 (387)
T 4awe_A 254 ELGLRNVDFGTMHLYPDWWSKSI-------------------------EWSNQWIHDHAASGRA---ANKPVVLEEYGWM 305 (387)
T ss_dssp HHTCTTCCCEEEEECHHHHTCCH-------------------------HHHHHHHHHHHHHHHH---HTCCEEEEEECCC
T ss_pred cccCCccceeeecccccccchhh-------------------------hhhHHHHHHHHHHHHh---cCCCeeecccccc
Confidence 23445678899998885432100 1111111211111122 3579999999999
Q ss_pred CCCC----CCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCee
Q 018955 274 TAGG----DGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPR 342 (348)
Q Consensus 274 S~G~----~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~k 342 (348)
+..+ ... ........+.......... ++ -...++.+..++....+......||+|..|++.+
T Consensus 306 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~-~~G~~~W~~~~~~~~~~~~~~dg~~i~~~d~~~~ 371 (387)
T 4awe_A 306 TDKGRLDQLGQ-VKNETRLEVVGGWQKIAIQ-----EK-LAGDMYWQFGYGGYSYGRNHDDSFTIYLEDDEAK 371 (387)
T ss_dssp CHHHHHHHHSC-CCCSCHHHHHHHHHHHHHH-----HT-CSEEEESCEECSCBTTBSCCCCSCCEETTSTTHH
T ss_pred ccCCCccchhh-hhHHHHHHHHHHHHHHHhC-----CC-CeEEEEEEEcCCCCCCCCccCCCCEEECCCCCHH
Confidence 8654 111 1112223333333333221 11 1234444444433222223445689999887653
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.44 E-value=7.6e-06 Score=86.04 Aligned_cols=246 Identities=14% Similarity=0.102 Sum_probs=142.7
Q ss_pred eeeEEecCCCC---CCCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHH
Q 018955 34 QIGVCYGMLGN---NLPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNNDLRRIASNQAEANT 105 (348)
Q Consensus 34 ~~Gi~Y~~~~~---~~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~ 105 (348)
..|+|+-+... ..++++. .++++|..|++.||+..- ++..+.+|...||-|+.-++.-....-.. .+...+
T Consensus 299 l~G~n~h~~~~~~G~~~~~e~~~~dl~l~k~~G~N~iR~~h~p~~~~~~dlcDe~Gi~V~~E~~~~~~~~~~~-~~~~~~ 377 (692)
T 3fn9_A 299 MYGVTRHQDWWGLGSALKNEHHDFDLAAIMDVGATTVRFAHYQQSDYLYSRCDTLGLIIWAEIPCVNRVTGYE-TENAQS 377 (692)
T ss_dssp CEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEEETTSCCCHHHHHHHHHHTCEEEEECCCBSCCCSSC-HHHHHH
T ss_pred eeccccCCCcccccccccHHHHHHHHHHHHHCCCCEEEecCCCCcHHHHHHHHHCCCEEEEcccccCCCCCHH-HHHHHH
Confidence 56999875432 2345544 467889999999999643 47899999999999998776421100001 233334
Q ss_pred HHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCc
Q 018955 106 WVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDY 185 (348)
Q Consensus 106 wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~ 185 (348)
.+++.|..+...-.|..-.+|||....+ .....+++.+.+.+++.. +.-||+.+..+.....
T Consensus 378 ~~~~~v~r~rNHPSIi~Ws~gNE~~~~~---~~~~~~~~~l~~~~k~~D--ptRpvt~~~~~~~~~~------------- 439 (692)
T 3fn9_A 378 QLRELIRQSFNHPSIYVWGLHNEVYQPH---EYTAALTRSLHDLAKTED--PDRYTVSVNGYGHMDH------------- 439 (692)
T ss_dssp HHHHHHHHHTTCTTEEEEEEEESCCSSH---HHHHHHHHHHHHHHHHHC--TTSEEEEEESSSCTTC-------------
T ss_pred HHHHHHHHhcCCCcceEEEeccccCccc---ccHHHHHHHHHHHHHHHC--CCCCEEEeCCCccccc-------------
Confidence 4555555543333577889999986532 333455566666666543 3457776653211110
Q ss_pred cchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccE
Q 018955 186 RPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGI 265 (348)
Q Consensus 186 ~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v 265 (348)
. +....|+++.|.|+-|-... . .-+...++. +.+ .++++||
T Consensus 440 -~--------~~~~~Dv~~~n~Y~gWY~~~-----------------~--------~~~~~~~~~----~~~-~~p~kPi 480 (692)
T 3fn9_A 440 -P--------VNLNADIQGMNRYFGWYEKK-----------------I--------QDIKPWVEQ----LEK-DYPYQKL 480 (692)
T ss_dssp -T--------TCSSSSEEEEECCBTTTBSC-----------------G--------GGHHHHHHH----HHH-HCTTCCE
T ss_pred -c--------ccccCCcccccccccccCCc-----------------h--------HHHHHHHHH----HHH-HhcCccE
Confidence 0 12345999999998543210 0 001111222 122 2489999
Q ss_pred EEeeeccCCCCC----------C-C-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCC--CCC--CCC
Q 018955 266 VISESGWPTAGG----------D-G-ALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGK--TGP--EIE 329 (348)
Q Consensus 266 ~I~ETGWPS~G~----------~-~-~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK--~~~--~~E 329 (348)
+++|.|+.+.-+ . + ..-+.+.|..|.+...+.+++ +|. -...|+..+||-... ..+ ..-
T Consensus 481 i~sEyG~~~~~g~~~~~~~~~~~~~~~~~see~Q~~~~~~~~~~~~~----~p~-~~G~fvW~~~D~~~~~~~~g~~~g~ 555 (692)
T 3fn9_A 481 MLTEYGADANLAHQTEYLGDALNWGKPFYPETFQTKTHEYQWSIIKD----HPY-IIASYLWNMFDFAVPMWTRGGVPAR 555 (692)
T ss_dssp EEEECCCCCBTTCCCSCCCSCCCSSSSCCBHHHHHHHHHHHHHHHHH----CTT-SCEEEESCSBCEEEEEEEETTEEEE
T ss_pred EEEEEcCCcccccccccccccccccCCCCCHHHHHHHHHHHHHHHhc----CCC-eEEEEEEEeeecCCCccccCCCCCe
Confidence 999999964321 0 1 013566777777777766642 342 456777778875421 101 123
Q ss_pred CceeeecCCCCee
Q 018955 330 RHWGLFAPTRQPR 342 (348)
Q Consensus 330 ~~wGl~~~d~~~k 342 (348)
.+.||++.||++|
T Consensus 556 n~kGl~t~dr~~k 568 (692)
T 3fn9_A 556 NMKGLITFDRKTK 568 (692)
T ss_dssp ECCCSBCTTSCCB
T ss_pred eeeeccccccccc
Confidence 4689999998754
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=7.8e-06 Score=76.99 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=74.9
Q ss_pred eeeEEecCC--CCCCCCHHHHHHHHhhCCCCeEEE--------ecCCh--------HHHHHHhcCCCEEEEecCCCchhh
Q 018955 34 QIGVCYGML--GNNLPSKRDVIALYNQNNIRRMRL--------YDPNR--------EALEALRGSNIEVMLGLPNNDLRR 95 (348)
Q Consensus 34 ~~Gi~Y~~~--~~~~~s~~~v~~ll~~~~~~~VRl--------Y~~d~--------~vl~A~~~~glkV~lGv~~~~~~~ 95 (348)
..|+|+... ....++.+++..+.++.|++.||+ |..++ .++..+.+.||+|+|.+.......
T Consensus 28 l~Gvn~~~~~w~~~~~~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g~ 107 (306)
T 2cks_A 28 LRGMSTHGIQWFDHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGD 107 (306)
T ss_dssp CEEEECCCHHHHGGGCSHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSCC
T ss_pred EEEEecCcccccCcCCCHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 568886421 122345555555666789999999 33443 367888899999999887531100
Q ss_pred hhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEe
Q 018955 96 IASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVS 162 (348)
Q Consensus 96 ~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~Vs 162 (348)
-..+.+...+..+.-+..|.....|- .-++||+... ....+.++++.+-+++++.+-..-|-|.
T Consensus 108 ~~~~~~~~~~~~~~ia~~y~~~~~V~-~el~NEP~~~--~~~~~~~~~~~~~~~IR~~dp~~~i~v~ 171 (306)
T 2cks_A 108 PHYNLDRAKTFFAEIAQRHASKTNVL-YEIANEPNGV--SWASIKSYAEEVIPVIRQRDPDSVIIVG 171 (306)
T ss_dssp GGGGHHHHHHHHHHHHHHHTTCSSEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred cccCHHHHHHHHHHHHHHhCCCCcEE-EEcCCCCCCC--CHHHHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 01123333333333344443333465 9999998642 4456677777777777777654334444
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=7.7e-06 Score=81.11 Aligned_cols=260 Identities=13% Similarity=0.143 Sum_probs=136.0
Q ss_pred HHHHHHHhhCCCCeEEEecC---------------------Ch-------HHHHHHhcCCCEEEEecCCCc-----hh--
Q 018955 50 RDVIALYNQNNIRRMRLYDP---------------------NR-------EALEALRGSNIEVMLGLPNND-----LR-- 94 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~---------------------d~-------~vl~A~~~~glkV~lGv~~~~-----~~-- 94 (348)
.+.++++|+.|++.||++.. ++ .+|..|.+.||+|++.+.+.- .+
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~~ 144 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQY 144 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchhh
Confidence 34577889999999999811 11 578889999999999876321 00
Q ss_pred --------------------------hhhhc---HHHHHHHHHhhccc--------cCCCceEEEEEecccccCCCc---
Q 018955 95 --------------------------RIASN---QAEANTWVQNNVRN--------FANNVKFKYIAVGNEAKPGDN--- 134 (348)
Q Consensus 95 --------------------------~~a~~---~~~a~~wv~~~v~~--------~~~~~~I~~I~VGNE~l~~~~--- 134 (348)
.+-.+ .+...++++.-+.+ |.....|.+..++||+-...+
T Consensus 145 ~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~~ 224 (440)
T 1uuq_A 145 MAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTT 224 (440)
T ss_dssp HHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCC
T ss_pred HHHhccCCCCCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCccc
Confidence 01111 23344455555555 543347999999999976421
Q ss_pred --chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH-HHhhcCCcccccccccc
Q 018955 135 --FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR-FLNENRSPLLLNLYPYF 211 (348)
Q Consensus 135 --~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~-fL~~~~d~~~vN~yPff 211 (348)
....+.+.++.+-+.+++..- +-+|+.... ..+.. + + + .....+ ......|++.+|.||..
T Consensus 225 ~~~~~~~~~~~~~~~~~Ir~~Dp--~~lV~~g~~-g~~~~----~-~----~----~~~~~~~~~~~~iD~~s~H~Y~~~ 288 (440)
T 1uuq_A 225 AEEKQIYIDWVHAAAAYIKTLDA--HHLVSSGSE-GEMGS----V-N----D----MQVFIDAHATPDIDYLTYHMWIRN 288 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCS--SSEEECCCC-SGGGT----T-T----C----HHHHHHHHCSTTCCSEEEEECTTT
T ss_pred ccchHHHHHHHHHHHHHHHhhCC--CCeEEECCc-cccCC----C-C----c----chhhHHhccCCCCCEEEEEeCCCc
Confidence 345667777777777777543 346665321 00110 0 0 0 000111 11345799999999852
Q ss_pred -cccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC---CCCCCCHHHH
Q 018955 212 -AIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG---DGALTNVDNA 287 (348)
Q Consensus 212 -~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~---~~~vas~~na 287 (348)
........+.++ .. ...+....++......++ .+|||+++|-|.++... ++ .|.+++
T Consensus 289 w~~~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~a~~---~~kPvil~EfG~~~~~~~~~~~--~s~~~~ 349 (440)
T 1uuq_A 289 WSWFDKTKPAETW----------PS----AWEKAQNYMRAHIDVAKQ---LNKPLVLEEFGLDRDMGSYAMD--STTEYR 349 (440)
T ss_dssp TTSSCTTSHHHHH----------HH----HHHHHHHHHHHHHHHHHH---HTCCEEEEEECCCCGGGCCCTT--SCCHHH
T ss_pred cccCCCccccccH----------HH----HHHHHHHHHHHHHHHHHH---hCCCEEEEeCCCCCCCCccCcC--CChHHH
Confidence 211000000000 00 001111111111111122 36799999999998642 23 567888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccEEEEEeecC--C------CCCC-----CCCCCceeeecCCCCeeeec
Q 018955 288 RTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDE--N------GKTG-----PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 288 ~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe--~------wK~~-----~~~E~~wGl~~~d~~~ky~l 345 (348)
..|++.+...+.+-.-..+. -...++.+.-|. + |..| ...+..+||+..++++|.++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~-~~G~~~W~~~d~~~~~~~~~~~~~g~d~~~d~~~~~~G~~~~~~~~~~~~ 419 (440)
T 1uuq_A 350 DNYFRGVFELMLASLEQGEP-SAGYNIWAWNGYGRTTRANYWWQEGDDFMGDPPQEEQGMYGVFDTDTSTI 419 (440)
T ss_dssp HHHHHHHHHHHHHHHHTTCS-EEEEEESCEEETCCCCCTTCCCCTTSCCCSSCTTSCTTSSCEETTCHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCC-ceeEEEeeecCCCCcccccccccCCccccCCcccccCCcccccCCChHHH
Confidence 88988765443210000110 122333333221 1 3222 12456789999999998654
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-05 Score=80.94 Aligned_cols=267 Identities=10% Similarity=0.077 Sum_probs=138.6
Q ss_pred eeEEecCCCCCC-CCHHHHHHHHh-hCCCCeEEEec--C-------------C----------hHHHHHHhcCCCEEEEe
Q 018955 35 IGVCYGMLGNNL-PSKRDVIALYN-QNNIRRMRLYD--P-------------N----------REALEALRGSNIEVMLG 87 (348)
Q Consensus 35 ~Gi~Y~~~~~~~-~s~~~v~~ll~-~~~~~~VRlY~--~-------------d----------~~vl~A~~~~glkV~lG 87 (348)
+|+|..... + ....+.+++++ ..|++.||+.. . . ..++..+.+.||++++-
T Consensus 22 ~g~~~~~~~--~~~~~~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~~~~~~Gi~p~v~ 99 (500)
T 1uhv_A 22 VGTGRLGLA--LQKEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVE 99 (500)
T ss_dssp EECSCGGGG--GBHHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCHHHHHHHHHHHHHTCEECEE
T ss_pred cccccchhh--hCHHHHHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCceEEehhHHHHHHHHHHHCCCEEEEE
Confidence 455554332 2 22345566776 88999999972 1 1 25788889999998887
Q ss_pred cCCCchhhhh----------------hcHHHHHHHHH----hhccccCCCceEE--EEEecccccCCC---c-chHHHHH
Q 018955 88 LPNNDLRRIA----------------SNQAEANTWVQ----NNVRNFANNVKFK--YIAVGNEAKPGD---N-FAQYLVP 141 (348)
Q Consensus 88 v~~~~~~~~a----------------~~~~~a~~wv~----~~v~~~~~~~~I~--~I~VGNE~l~~~---~-~~~~Ll~ 141 (348)
+...-. .+. .+.....+.+. .-..+| +...|+ .+.++||+-..+ . .+++...
T Consensus 100 l~~~P~-~~~~~~~~~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~ry-g~~~V~~W~~~~~NEpn~~~~~~~~~~~~y~~ 177 (500)
T 1uhv_A 100 IGFMPK-KLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRY-GIEEVLKWPFEIWNEPNLKEFWKDADEKEYFK 177 (500)
T ss_dssp ECCCCT-TTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHH-CHHHHTTCCEEESSCTTSTTTSGGGCHHHHHH
T ss_pred EccChH-HHhCCCCceeecCCCCCCCcCHHHHHHHHHHHHHHHHHhc-CccceeeeeEEEeeCCCCcccCCCCCHHHHHH
Confidence 653100 000 01111111111 122233 222377 789999986421 1 4455556
Q ss_pred HHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhh---cCCcccccccccccccCCCC
Q 018955 142 AMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNE---NRSPLLLNLYPYFAIAGNRQ 218 (348)
Q Consensus 142 ~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~---~~d~~~vN~yPff~~~~~~~ 218 (348)
..+....++++.. ++++|+-+-... .. ...+..+++++.+ ..|++++|.|+.......
T Consensus 178 ~~~~~~~~ik~~~--P~~~vggp~~~~------------~~---~~w~~~~l~~~~~~~~~~D~is~H~Y~~~~~~~~-- 238 (500)
T 1uhv_A 178 LYKVTAKAIKEVN--ENLKVGGPAICG------------GA---DYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYT-- 238 (500)
T ss_dssp HHHHHHHHHHHHC--TTSCEEEEEECT------------TC---THHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCC--
T ss_pred HHHHHHHHHHHhC--CCCEEECcccCC------------Cc---hHHHHHHHHHHHhCCCCCcEEEEeecCCCccccc--
Confidence 6666666666653 346776433211 00 1233455555543 479999999986542110
Q ss_pred CCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 018955 219 ISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV 298 (348)
Q Consensus 219 i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~ 298 (348)
+ +. . ... ..+ . ..+...+..+...+++.+.+++||+|+|.||++..... ......+..|....+...
T Consensus 239 -~-~~-~----~~~--~~~--~-~~~~~~i~~~~~~l~~~~~~~~pi~iTE~g~~~~~~~~-~~d~~~~a~~l~~~l~~~ 305 (500)
T 1uhv_A 239 -P-HL-I----YQE--IMP--S-EYMLNEFKTVREIIKNSHFPNLPFHITEYNTSYSPQNP-VHDTPFNAAYIARILSEG 305 (500)
T ss_dssp -S-SC-C----CCC--BCC--H-HHHHHHHHHHHHHHHTSSCTTCCEEEEEEESCSCTTCG-GGGSHHHHHHHHHHHHHG
T ss_pred -c-cc-c----ccc--cCC--H-HHHHHHHHHHHHHHHhcCCCCCcEEEecCcccCCCCCC-cCcHHHHHHHHHHHHHHH
Confidence 0 00 0 000 001 1 22233444555556666767899999999999864421 122233334443322222
Q ss_pred HhcCCCCCCCCcc-EEEEEeec---CCCCCCCCCCCceeeecCCCCeeeec
Q 018955 299 KRGSPKRPGRPIE-TYIFAMFD---ENGKTGPEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 299 ~~gtp~~~~~~~~-~f~F~~fD---e~wK~~~~~E~~wGl~~~d~~~ky~l 345 (348)
. + .+. +.++.+.| +.|.+....+.+|||++.|++||-..
T Consensus 306 ~-~-------~v~~~~~W~l~D~~e~~~~~~~~~~~~fGL~~~d~~pKPay 348 (500)
T 1uhv_A 306 G-D-------YVDSFSYWTFSDVFEERDVPRSQFHGGFGLVALNMIPKPTF 348 (500)
T ss_dssp G-G-------TCSEEEESCSBSCCCTTSSCCSSCSCCSCSEETTTEECHHH
T ss_pred H-h-------hhhheeeeEEechhhccCCCCccccCCcccCCCCCCcCcHH
Confidence 1 1 122 33444444 33433223566899999999998643
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.7e-05 Score=76.56 Aligned_cols=130 Identities=8% Similarity=-0.038 Sum_probs=84.4
Q ss_pred eeeEEecCCCC---CCCCHHHHHHHHhhCCCCeEEEecCC---------------hHHHHHHhcCCCEEEEecCCCc---
Q 018955 34 QIGVCYGMLGN---NLPSKRDVIALYNQNNIRRMRLYDPN---------------REALEALRGSNIEVMLGLPNND--- 92 (348)
Q Consensus 34 ~~Gi~Y~~~~~---~~~s~~~v~~ll~~~~~~~VRlY~~d---------------~~vl~A~~~~glkV~lGv~~~~--- 92 (348)
..|||+..... ...-.++.++++|+.|++.||+.-.. ..++..|.+.||.|+|.+....
T Consensus 69 l~Gvn~~~~~~~~~~g~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~ 148 (359)
T 4hty_A 69 FRGVNISDPDKIDKDKRFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLK 148 (359)
T ss_dssp CEEEEECCHHHHHHTTCCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETT
T ss_pred EEEEecCCcccCCCCCCcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCC
Confidence 56999863110 01112567788999999999997221 3688899999999999876421
Q ss_pred -----hhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cchHHHHHHHHHHHHHHHHcCCCCceEEe
Q 018955 93 -----LRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NFAQYLVPAMRNIQNAINAAGLGNQIKVS 162 (348)
Q Consensus 93 -----~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~~~~Ll~~i~~v~~~L~~~gl~~~I~Vs 162 (348)
.+......+...+.++.-+.+|.....|..+-++||+.... ...+.+.++++.+.+++++.+-..-|-|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~ 228 (359)
T 4hty_A 149 SEMFQNNSYHTTKGETFDFWRRVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVA 228 (359)
T ss_dssp TTEESSGGGCCCHHHHHHHHHHHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred cccccCCcchhHHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEc
Confidence 01111123444444444555554456788999999997531 24678888999999999988765434444
Q ss_pred e
Q 018955 163 T 163 (348)
Q Consensus 163 T 163 (348)
+
T Consensus 229 g 229 (359)
T 4hty_A 229 G 229 (359)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=8.6e-06 Score=79.88 Aligned_cols=224 Identities=15% Similarity=0.153 Sum_probs=121.1
Q ss_pred CCeeeEE--ecCCCCCCCCHH---HHHHHHhhCCCCeEEEecCC------------------------------------
Q 018955 32 SAQIGVC--YGMLGNNLPSKR---DVIALYNQNNIRRMRLYDPN------------------------------------ 70 (348)
Q Consensus 32 ~~~~Gi~--Y~~~~~~~~s~~---~v~~ll~~~~~~~VRlY~~d------------------------------------ 70 (348)
-.+.|.| |.++ ++.+ ++++.+++.|++.||++.-.
T Consensus 27 ~~f~G~N~y~~~~----~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~L 102 (383)
T 3pzg_A 27 FRFIGSNNYYMHY----KSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERL 102 (383)
T ss_dssp CCEEEEECSCTTT----SCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHH
T ss_pred EEEEEEEeccccc----CCHHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHH
Confidence 3467888 4444 3443 45778889999999998421
Q ss_pred hHHHHHHhcCCCEEEEecCCC-----chhh------------hhhcH---HHHHHHHHhhccc--------cCCCceEEE
Q 018955 71 REALEALRGSNIEVMLGLPNN-----DLRR------------IASNQ---AEANTWVQNNVRN--------FANNVKFKY 122 (348)
Q Consensus 71 ~~vl~A~~~~glkV~lGv~~~-----~~~~------------~a~~~---~~a~~wv~~~v~~--------~~~~~~I~~ 122 (348)
..+|..|++.||+|+|.+.+. ..+. +-.++ +...+.++.-+.. |.....|.+
T Consensus 103 D~~i~~A~k~GI~viL~l~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~ 182 (383)
T 3pzg_A 103 DYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMA 182 (383)
T ss_dssp HHHHHHHHHHTCEEEEECCBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEE
T ss_pred HHHHHHHHHCCCEEEEEccccccccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEE
Confidence 147888899999999998652 1110 01121 2333344444444 433357999
Q ss_pred EEecccccCCCc-chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccC----CCCcccc----cCccchhhHHH
Q 018955 123 IAVGNEAKPGDN-FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFP----PSRGSFK----QDYRPILDPLI 193 (348)
Q Consensus 123 I~VGNE~l~~~~-~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~p----Ps~~~f~----~d~~~~~~~~l 193 (348)
.-++||+-.... ..+.+...++++-+.+++..- +-+|++.... .+..+.| |+.+.+. ++ .+. ...+
T Consensus 183 w~l~NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp--~~lVt~G~~g-~~~~~~~~~~~~~~~~~~~~~~~g-~df-~~~~ 257 (383)
T 3pzg_A 183 WELANELRCETDKSGNTLVEWVKEMSSYIKSLDP--NHLVAVGDEG-FFSNYEGFKPYGGEAEWAYNGWSG-VDW-KKLL 257 (383)
T ss_dssp EESCBTCCCTTCTTSHHHHHHHHHHHHHHHHHCS--SSEEECCCCC-CCBCCTTCCCGGGTTGGGTBTTTS-CCH-HHHH
T ss_pred EEecCCCCcccCccHHHHHHHHHHHHHHHHhhCC--CceEEEcccc-cccccccccccCCCCccccccccC-CCh-Hhhc
Confidence 999999976432 345566667777777776543 4567665421 1111100 0001110 00 011 1111
Q ss_pred HHHhhcCCcccccccccccccCCCCCCccc-cccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeecc
Q 018955 194 RFLNENRSPLLLNLYPYFAIAGNRQISLDY-ALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGW 272 (348)
Q Consensus 194 ~fL~~~~d~~~vN~yPff~~~~~~~i~~~~-a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGW 272 (348)
.+...||..+|+||.. +..+ .+. .-| -..++++.++.. +++ +|||+++|.||
T Consensus 258 --~~~~iD~~t~H~Yp~~-w~~~----~~~~~~~-------------~~~wi~~h~~~a----~~~---gKPvv~eEfG~ 310 (383)
T 3pzg_A 258 --SIETVDFGTFHLYPSH-WGVS----PENYAQW-------------GAKWIEDHIKIA----KEI---GKPVVLEEYGI 310 (383)
T ss_dssp --TCTTCCSEEEEECHHH-HTCC----GGGHHHH-------------HHHHHHHHHHHH----HHH---TCCEEEEEECC
T ss_pred --CCCCCCEEEEEecccc-cCcC----hHHHHHH-------------HHHHHHHHHHHH----Hhc---CCCEEEEecCC
Confidence 3457799999999963 2111 000 000 013333333322 233 57999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHH
Q 018955 273 PTAGGDGALTNVDNARTYNNNLIQHV 298 (348)
Q Consensus 273 PS~G~~~~vas~~na~~y~~~~~~~~ 298 (348)
++.+. .+...|++.+.+.+
T Consensus 311 ~~~~~-------~~r~~~~~~~~~~~ 329 (383)
T 3pzg_A 311 PKSAP-------VNRTAIYRLWNDLV 329 (383)
T ss_dssp CTTSS-------SCHHHHHHHHHHHH
T ss_pred CCCCh-------hHHHHHHHHHHHHH
Confidence 97532 22445666666555
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=2.5e-05 Score=73.21 Aligned_cols=127 Identities=16% Similarity=0.153 Sum_probs=78.4
Q ss_pred eeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe-------cCC-----hHHHHHHhcCCCEEEEecCCCchh---hhhh
Q 018955 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY-------DPN-----REALEALRGSNIEVMLGLPNNDLR---RIAS 98 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY-------~~d-----~~vl~A~~~~glkV~lGv~~~~~~---~~a~ 98 (348)
..|+|+.... .|...+.++.+|+.|++.||+. ..+ ..++..+.+.||+|+|.+...... .-..
T Consensus 21 l~Gvn~~~~w--~~~~~~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~~~~~ 98 (302)
T 1bqc_A 21 IRGVSHPHNW--YPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSGAS 98 (302)
T ss_dssp CEEEEECTTT--CTTCTTHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTTCC
T ss_pred EEEeeccccc--CcchHHHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCCCchh
Confidence 5699985321 2333477888999999999995 222 578888999999999998753100 0011
Q ss_pred cHHHHHHHHHhhccccCCCceEEEEEecccccCCCcc-hHHHHHHHHHHHHHHHHcCCCCceEEe
Q 018955 99 NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNF-AQYLVPAMRNIQNAINAAGLGNQIKVS 162 (348)
Q Consensus 99 ~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~-~~~Ll~~i~~v~~~L~~~gl~~~I~Vs 162 (348)
..+...++.+.-+..|.....|..+-++||+...... ......+++.+-+++++.+-..-|-|+
T Consensus 99 ~~~~~~~~w~~ia~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~ 163 (302)
T 1bqc_A 99 TLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVD 163 (302)
T ss_dssp CHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred hHHHHHHHHHHHHHHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 2344444334334444322356699999998643211 223567788888888887654434443
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.25 E-value=6.5e-05 Score=72.84 Aligned_cols=248 Identities=15% Similarity=0.167 Sum_probs=125.9
Q ss_pred HHHHHHHhhCCCCeEEEe---c-----C----C-------hHHHHHHhcCCCEEEEecCCCchh--------hhhhcHHH
Q 018955 50 RDVIALYNQNNIRRMRLY---D-----P----N-------REALEALRGSNIEVMLGLPNNDLR--------RIASNQAE 102 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY---~-----~----d-------~~vl~A~~~~glkV~lGv~~~~~~--------~~a~~~~~ 102 (348)
++.++.+++.|++.||+- . . + ..++..+.+.||+|+|-+...... .-....+.
T Consensus 64 ~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~~~~~~~~~~~~~ 143 (380)
T 1edg_A 64 KQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKK 143 (380)
T ss_dssp HHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCCCCccccHHHHHH
Confidence 567888899999999984 1 1 1 247788889999999998764310 00111222
Q ss_pred H-HHHHHhhccccCCCceEEEEEecccccCCCc--ch-------------HHHHHHHHHHHHHHHHcCC---CCceEEee
Q 018955 103 A-NTWVQNNVRNFANNVKFKYIAVGNEAKPGDN--FA-------------QYLVPAMRNIQNAINAAGL---GNQIKVST 163 (348)
Q Consensus 103 a-~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~--~~-------------~~Ll~~i~~v~~~L~~~gl---~~~I~VsT 163 (348)
. .+..+.-...|.....+..+-+.||+...+. .. +.|.++++.+-+++++.|- ..-|-|..
T Consensus 144 ~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~~~~~~~~~~IR~~g~~np~~~Iiv~g 223 (380)
T 1edg_A 144 YITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPG 223 (380)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCceEEECC
Confidence 2 2222222233322235679999999976321 11 5678889999999998862 22244433
Q ss_pred eeeccccccccCCCCcccccCccchhh-HHHHHHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchh
Q 018955 164 AIETGALGESFPPSRGSFKQDYRPILD-PLIRFLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYR 241 (348)
Q Consensus 164 ~~~~~~~~~s~pPs~~~f~~d~~~~~~-~~l~fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~ 241 (348)
.. ++....... .|.. +.-. + ......+.+|.|+.|..... ..-+ ....|.. ......
T Consensus 224 ~~-~~~~~~~~~----~~~~---p~d~~~-----~~~n~v~s~H~Y~~~~f~~~~~~~~-g~~~w~~-------~~~~~~ 282 (380)
T 1edg_A 224 YV-ASPDGATND----YFRM---PNDISG-----NNNKIIVSVHAYCPWNFAGLAMADG-GTNAWNI-------NDSKDQ 282 (380)
T ss_dssp GG-GCHHHHHST----TCCC---CCCCTT-----CCSCEEEEEECCCSHHHHTSCGGGT-CCCCCCT-------TCHHHH
T ss_pred Cc-CCccccccc----cccC---CCCCcc-----ccCcEEEEEeecCCcccccccccCC-CCCccCC-------CchhhH
Confidence 22 111000000 0100 0000 0 00134677788876543221 0000 0000100 000011
Q ss_pred hHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCC
Q 018955 242 SLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDEN 321 (348)
Q Consensus 242 n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~ 321 (348)
..++..++.+...+.+ .++||+|+|.|.+..+ +.+....|.+.+++.+++ .++..++-+. . +
T Consensus 283 ~~i~~~~~~~~~~~~~---~g~Pv~igEfG~~~~~------~~~~~~~~~~~~~~~~~~-------~gig~~~W~~-g-~ 344 (380)
T 1edg_A 283 SEVTWFMDNIYNKYTS---RGIPVIIGECGAVDKN------NLKTRVEYMSYYVAQAKA-------RGILCILWDN-N-N 344 (380)
T ss_dssp HHHHHHHHHHHHHTGG---GTCCEEEEEECCCCSS------CHHHHHHHHHHHHHHHHH-------TTCEEEECCC-C-C
T ss_pred HHHHHHHHHHHHHHHH---cCCCEEEEeccCCCCC------ChHHHHHHHHHHHHHHHH-------CCCceEEECC-C-C
Confidence 3333444443322222 3679999999998652 234566788888887752 2455543332 2 2
Q ss_pred CCCCCCCCCceeeecCCC
Q 018955 322 GKTGPEIERHWGLFAPTR 339 (348)
Q Consensus 322 wK~~~~~E~~wGl~~~d~ 339 (348)
++. -+..|||++.+.
T Consensus 345 ~~g---~~e~~g~~~~~~ 359 (380)
T 1edg_A 345 FSG---TGELFGFFDRRS 359 (380)
T ss_dssp CSS---SSCCCCCEETTT
T ss_pred CCC---CCcceeEEECCC
Confidence 221 133699998653
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00021 Score=68.12 Aligned_cols=123 Identities=11% Similarity=0.036 Sum_probs=77.8
Q ss_pred eeeEEecCCCCC--------CCCHHHHHHHHhhCCCCeEEEecC------C------------------------hHHHH
Q 018955 34 QIGVCYGMLGNN--------LPSKRDVIALYNQNNIRRMRLYDP------N------------------------REALE 75 (348)
Q Consensus 34 ~~Gi~Y~~~~~~--------~~s~~~v~~ll~~~~~~~VRlY~~------d------------------------~~vl~ 75 (348)
..|+|+...... ..+.+++++.+++.|++.||+--. + ..++.
T Consensus 23 l~GvN~~g~~~~~~~~~g~~~~~~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~ 102 (358)
T 1ece_A 23 IAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVA 102 (358)
T ss_dssp CEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHH
T ss_pred EEEEecCCcCccccCccchhhchHHHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHH
Confidence 579998543211 123477889999999999999721 1 23788
Q ss_pred HHhcCCCEEEEecCCCch----hhh---hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cchHHHHHHH
Q 018955 76 ALRGSNIEVMLGLPNNDL----RRI---ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NFAQYLVPAM 143 (348)
Q Consensus 76 A~~~~glkV~lGv~~~~~----~~~---a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~~~~Ll~~i 143 (348)
.+.+.||+|+|.+..... ..+ ....+...+.++.-+..|.....|.+.-+.||+.... .....+.+++
T Consensus 103 ~a~~~Gi~vild~h~~~~~~~~~~w~~~~~~~~~~~~~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~ 182 (358)
T 1ece_A 103 YAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAA 182 (358)
T ss_dssp HHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHH
T ss_pred HHHHCCCEEEEecCCCCCCCCCCCCcCCCccHHHHHHHHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHH
Confidence 888999999998864110 000 1123333333343344443335688999999997532 1345677778
Q ss_pred HHHHHHHHHcCCC
Q 018955 144 RNIQNAINAAGLG 156 (348)
Q Consensus 144 ~~v~~~L~~~gl~ 156 (348)
+.+.+++++.+-.
T Consensus 183 ~~~~~~Ir~~dp~ 195 (358)
T 1ece_A 183 ERAGNAVLSVNPN 195 (358)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHhhCCC
Confidence 8888888877643
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=98.20 E-value=5.2e-05 Score=72.46 Aligned_cols=128 Identities=19% Similarity=0.180 Sum_probs=76.9
Q ss_pred eeeEEecCCC--CCCCCHHHHHHHHhhCCCCeEEEe--------cCC-------hHHHHHHhcCCCEEEEecCCCchhhh
Q 018955 34 QIGVCYGMLG--NNLPSKRDVIALYNQNNIRRMRLY--------DPN-------REALEALRGSNIEVMLGLPNNDLRRI 96 (348)
Q Consensus 34 ~~Gi~Y~~~~--~~~~s~~~v~~ll~~~~~~~VRlY--------~~d-------~~vl~A~~~~glkV~lGv~~~~~~~~ 96 (348)
..|||..... ...-+.+++..++++.|++.||+- -.| ..+++.|.+.||.|+|-+.......-
T Consensus 54 l~Gvn~h~~~~~~~~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~~~ 133 (327)
T 3pzt_A 54 LKGISSHGLQWYGEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGNP 133 (327)
T ss_dssp CEEEEESCHHHHGGGCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSCST
T ss_pred EEEEcCCchhhcCCCCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc
Confidence 4588843210 122345556566678999999993 223 35788889999999998875321000
Q ss_pred hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEe
Q 018955 97 ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVS 162 (348)
Q Consensus 97 a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~Vs 162 (348)
....+...++.+.-+..|.....|. +-++||+.........+.++++.+-+++++.+-..-|-|+
T Consensus 134 ~~~~~~~~~~w~~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~ 198 (327)
T 3pzt_A 134 NQNKEKAKEFFKEMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVG 198 (327)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEEC
T ss_pred hHHHHHHHHHHHHHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 1123334444444445553334566 9999999753222346777788888888887754334444
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=98.15 E-value=0.00016 Score=67.38 Aligned_cols=126 Identities=13% Similarity=0.163 Sum_probs=76.9
Q ss_pred eeeEEec-CCCCCCCCHHHHHHHHhhCCCCeEEE-------ecCC-----hHHHHHHhcCCCEEEEecCCCchhhhhhcH
Q 018955 34 QIGVCYG-MLGNNLPSKRDVIALYNQNNIRRMRL-------YDPN-----REALEALRGSNIEVMLGLPNNDLRRIASNQ 100 (348)
Q Consensus 34 ~~Gi~Y~-~~~~~~~s~~~v~~ll~~~~~~~VRl-------Y~~d-----~~vl~A~~~~glkV~lGv~~~~~~~~a~~~ 100 (348)
..|||++ .+.. +-.++.++.+++.|++.||+ |..+ ..++..+.+.||.|+|-+.......-....
T Consensus 19 lrGvn~~~~w~~--~~~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~ 96 (294)
T 2whl_A 19 MRGINHGHAWYK--DTASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDSRSDL 96 (294)
T ss_dssp CEEEEECGGGCG--GGHHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCCHHHH
T ss_pred EEEeecccccCC--cchHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCcchhH
Confidence 5699985 2221 11356788899999999999 5444 378899999999999988763210000112
Q ss_pred HHHHHHHHhhccccCCC-ceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEee
Q 018955 101 AEANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVST 163 (348)
Q Consensus 101 ~~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT 163 (348)
+...+..+.-+..|... ..| .+-++||+... -.........+.+-+++++.+-..-|-|..
T Consensus 97 ~~~~~~w~~ia~~y~~~~~~v-~~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~ 158 (294)
T 2whl_A 97 NRAVDYWIEMKDALIGKEDTV-IINIANEWYGS-WDGSAWADGYIDVIPKLRDAGLTHTLMVDA 158 (294)
T ss_dssp HHHHHHHHHTHHHHTTCTTTE-EEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCeE-EEEecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 33333223333344222 345 68999999742 133456666777888888877544344443
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=5.4e-06 Score=78.94 Aligned_cols=256 Identities=11% Similarity=-0.019 Sum_probs=137.3
Q ss_pred CCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe---------------cCC--hHHHHHHhcCCCEEEEe--cCCCc
Q 018955 32 SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY---------------DPN--REALEALRGSNIEVMLG--LPNND 92 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY---------------~~d--~~vl~A~~~~glkV~lG--v~~~~ 92 (348)
+-.+|.||.+.. ++ .++..+++++ +|+.|+.= +-. ..++..+.+.||+|... +|...
T Consensus 12 ~~~~G~a~~~~~--~~-~~~~~~~~~~-~fn~~t~en~~kW~~~ep~~g~~~~~~~D~~~~~a~~~gi~v~ghtl~W~~~ 87 (315)
T 3cui_A 12 GRDFGFALDPNR--LS-EAQYKAIADS-EFNLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWHSQ 87 (315)
T ss_dssp TCEEEEEECGGG--GG-SHHHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEEEESSS
T ss_pred CCeEEEEcChhh--cC-CHHHHHHHHh-cCCEEEECCcccHHHhCCCCCcCChHHHHHHHHHHHHCCCEEEEEeeecCCC
Confidence 467899998754 33 2344455554 58888882 111 36888888999998654 46555
Q ss_pred hhhhhh------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC-c-----chHHH--HHHHHHHHHHHHHcCCCCc
Q 018955 93 LRRIAS------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-N-----FAQYL--VPAMRNIQNAINAAGLGNQ 158 (348)
Q Consensus 93 ~~~~a~------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-~-----~~~~L--l~~i~~v~~~L~~~gl~~~ 158 (348)
.+.... -.+...+++++-+..| + ..|...-|.||++... . ..... -.+++..-+..++. +++
T Consensus 88 ~P~W~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~--dP~ 163 (315)
T 3cui_A 88 LPDWAKNLNGSAFESAMVNHVTKVADHF-E-GKVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAA--DPT 163 (315)
T ss_dssp CCHHHHTCCHHHHHHHHHHHHHHHHHHH-T-TTCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHH--CSS
T ss_pred CCHHHhcCCHHHHHHHHHHHHHHHHHHc-C-CceEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhh--CCC
Confidence 444221 1244556666666666 3 3699999999998743 1 11111 12333333333332 234
Q ss_pred eEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCccccccccCCceecc
Q 018955 159 IKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSD 235 (348)
Q Consensus 159 I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d 235 (348)
.+|-.-+ +++. .++ .- ...+..+++.|.+. .|.+++..|......
T Consensus 164 a~l~~nd-y~~~---~~~---~k----~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~--------------------- 211 (315)
T 3cui_A 164 AKLCIND-YNVE---GIN---AK----SNSLYDLVKDFKARGVPLDCVGFQSHLIVGQV--------------------- 211 (315)
T ss_dssp SEEEEEE-SSCS---SSS---HH----HHHHHHHHHHHHHHTCCCCEEEECCEEETTCC---------------------
T ss_pred CEEEECC-cccc---Ccc---hH----HHHHHHHHHHHHHCCCcccEEEeeeecCCCCC---------------------
Confidence 6665432 1111 111 00 12234455555443 366665555422110
Q ss_pred CCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEE
Q 018955 236 GSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIF 315 (348)
Q Consensus 236 ~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F 315 (348)
. ..+.+.++.. . -.++||+|||.|+++.-... ..+.+.|..|++.+++.+.+ .|. -..+.+-
T Consensus 212 -~----~~~~~~l~~~----a---~~g~pv~iTE~di~~~~~~~-~~~~~~qa~~~~~~~~~~~~----~~~-v~git~W 273 (315)
T 3cui_A 212 -P----GDFRQNLQRF----A---DLGVDVRITELDIRMRTPSD-ATKLATQAADYKKVVQACMQ----VTR-CQGVTVW 273 (315)
T ss_dssp -C----TTHHHHHHHH----H---TTTCEEEEEEEEEEEESSCC-HHHHHHHHHHHHHHHHHHHT----STT-EEEEEES
T ss_pred -H----HHHHHHHHHH----H---hcCCceEEEecccccCCCCC-hHHHHHHHHHHHHHHHHHHh----CCC-ceEEEEE
Confidence 0 1122223322 2 24689999999998632111 13556788899999887752 231 1334444
Q ss_pred EeecC-CCCCC-CCCCCceeeecCCCCeeeec
Q 018955 316 AMFDE-NGKTG-PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 316 ~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~l 345 (348)
.+-|. .|.++ ...+.+.|||+.|++||-..
T Consensus 274 g~~D~~sW~~~~~~~~~~~~Lfd~d~~pKpA~ 305 (315)
T 3cui_A 274 GITDKYSWVPDVFPGEGAALVWDASYAKKPAY 305 (315)
T ss_dssp CSBTTTCSHHHHSTTEECCSSBCTTSCBCHHH
T ss_pred eCCCCCccCCCCCCCCCCceeECCCCCCCHHH
Confidence 44443 56642 12245689999999999654
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.6e-05 Score=73.68 Aligned_cols=246 Identities=9% Similarity=-0.002 Sum_probs=138.1
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe-cC------------C----hHHHHHHhcCCCEEEEe--cCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY-DP------------N----REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY-~~------------d----~~vl~A~~~~glkV~lG--v~~~ 91 (348)
.+-.+|.||.+.. ++ .++..+++++ +|+.|++= .. + ..++..+++.||+|..+ +|..
T Consensus 11 ~~~~~G~a~~~~~--~~-~~~~~~~~~~-~fn~~t~en~~kW~~~ep~~g~~~~~~~D~~v~~a~~~gi~v~gh~lvW~~ 86 (302)
T 1nq6_A 11 KGRYFGAAVAANH--LG-EAAYASTLDA-QFGSVTPENEMKWDAVESSRNSFSFSAADRIVSHAQSKGMKVRGHTLVWHS 86 (302)
T ss_dssp TTCEEEEEECGGG--TT-SHHHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEEEEST
T ss_pred cCCEEEEEcChhh--cC-CHHHHHHHHh-cCCeEEEcCceeeccccCCCCcCCcHHHHHHHHHHHHCCCEEEEEecccCC
Confidence 3467899998754 33 2344455554 58888872 11 1 36888888999999744 4654
Q ss_pred chhhhh------hcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-------cchHHH--HHHHHHHHHHHHHcCCC
Q 018955 92 DLRRIA------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-------NFAQYL--VPAMRNIQNAINAAGLG 156 (348)
Q Consensus 92 ~~~~~a------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-------~~~~~L--l~~i~~v~~~L~~~gl~ 156 (348)
..+..- .-.+...+++++-+..| + ..|...-|.||++... ...... ..+++..-+..++. +
T Consensus 87 ~~P~W~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~--d 162 (302)
T 1nq6_A 87 QLPGWVSPLAATDLRSAMNNHITQVMTHY-K-GKIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTV--D 162 (302)
T ss_dssp TCCTTTTTSCHHHHHHHHHHHHHHHHHHT-T-TSCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHH--C
T ss_pred CCChhhhcCCHHHHHHHHHHHHHHHHHHc-C-CceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHh--C
Confidence 444322 12345566666656566 3 4789999999998642 111111 12344443333333 2
Q ss_pred CceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCccccccccCCcee
Q 018955 157 NQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVV 233 (348)
Q Consensus 157 ~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~ 233 (348)
++.++-..+ ++.. .+|. . ...+..+++.|.+. .|.++++.|.+..... .
T Consensus 163 P~a~L~~Nd-y~~~---~~~~--k-----~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~~~-----------------~ 214 (302)
T 1nq6_A 163 ADAKLCYND-YNTD---GQNA--K-----SNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSPV-----------------P 214 (302)
T ss_dssp TTSEEEEEE-SSCS---SSSH--H-----HHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCC-----------------C
T ss_pred CCCEEEecc-cccc---cCch--H-----HHHHHHHHHHHHHCCCCcceEEEEEeecCCCCC-----------------H
Confidence 345555443 1111 1110 0 11122344444433 5999998888643210 0
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEE
Q 018955 234 SDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETY 313 (348)
Q Consensus 234 ~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f 313 (348)
.-+...++.. .. .++||+|||.|+++ +.+.|..|++.++..+.+ .++ -..++
T Consensus 215 --------~~~~~~l~~~----a~---~g~pi~iTE~di~~--------~~~~qa~~~~~~~~~~~~----~~~-v~git 266 (302)
T 1nq6_A 215 --------SDFQANLQRF----AD---LGVDVQITELDIEG--------SGSAQAANYTKVVNACLA----VTR-CTGIT 266 (302)
T ss_dssp --------TTHHHHHHHH----HT---TTCEEEEEEEEECC--------CHHHHHHHHHHHHHHHHT----STT-EEEEE
T ss_pred --------HHHHHHHHHH----Hh---cCCcEEEeeCCCCC--------chHHHHHHHHHHHHHHHh----CCC-ceEEE
Confidence 1112222221 22 46799999999993 346688888998887752 221 24466
Q ss_pred EEEeecC-CCCCCCCCCCceeeecCCCCeeee
Q 018955 314 IFAMFDE-NGKTGPEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 314 ~F~~fDe-~wK~~~~~E~~wGl~~~d~~~ky~ 344 (348)
+..+.|. .|.++ .+=|||+.|++||-.
T Consensus 267 ~Wg~~D~~sW~~~----~~~ll~d~~~~pKpA 294 (302)
T 1nq6_A 267 VWGVTDKYSWRSG----GTPLLFDGDYNKKPA 294 (302)
T ss_dssp ESCSCGGGCTTGG----GCCSSBCTTSCBCHH
T ss_pred EEcCCCCCCcCCC----CCCccCCCCCCCCHH
Confidence 6666664 57753 223689999999964
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=5.6e-05 Score=73.96 Aligned_cols=257 Identities=12% Similarity=0.035 Sum_probs=139.1
Q ss_pred CCeeeEEecCCCCCCC-CHHHHHHHHhhCCCCeEEEe---------------cCC--hHHHHHHhcCCCEEEEe--cCCC
Q 018955 32 SAQIGVCYGMLGNNLP-SKRDVIALYNQNNIRRMRLY---------------DPN--REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~-s~~~v~~ll~~~~~~~VRlY---------------~~d--~~vl~A~~~~glkV~lG--v~~~ 91 (348)
.-.+|.||.+.. ++ .-.+..+++++ +|+.|+.= +-+ ..++.-+++.||+|... +|..
T Consensus 34 ~f~~G~a~~~~~--~~~~~~~~~~l~~~-~fn~vt~eN~~kW~~~ep~~G~~~f~~~D~~v~~a~~~gi~vrgHtlvW~~ 110 (378)
T 1ur1_A 34 NFLIGAALNATI--ASGADERLNTLIAK-EFNSITPENCMKWGVLRDAQGQWNWKDADAFVAFGTKHNLHMVGHTLVWHS 110 (378)
T ss_dssp TCEEEEEECHHH--HTTCCHHHHHHHHH-HCSEEEESSTTSHHHHBCTTCCBCCHHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred CCEEEEEeCHHH--hCcCCHHHHHHHHc-cCCeEEECCcccHHHhcCCCCccCchHHHHHHHHHHHCCCEEEeecccccc
Confidence 457899998753 22 13456677754 58999882 111 36888888999999765 5766
Q ss_pred chhhhhh------------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cchHHHH--HHHHHHHHHHHH
Q 018955 92 DLRRIAS------------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NFAQYLV--PAMRNIQNAINA 152 (348)
Q Consensus 92 ~~~~~a~------------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~~~~Ll--~~i~~v~~~L~~ 152 (348)
..+.... -.+...++|++-+..| + .+|...-|.||++..+ ....+.+ .+|...-+.-++
T Consensus 111 q~P~W~~~d~~g~~~~~~~~~~~~~~~I~~v~~rY-~-g~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~ 188 (378)
T 1ur1_A 111 QIHDEVFKNADGSYISKAALQKKMEEHITTLAGRY-K-GKLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANE 188 (378)
T ss_dssp SSCGGGTBCTTSCBCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred cCchhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-C-CcceEEEeecccccCCCCccCChhhhhccHHHHHHHHHHHHH
Confidence 5544221 1345566776666666 3 4899999999999742 1112221 344433333333
Q ss_pred cCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCccccccccC
Q 018955 153 AGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLDYALFRSQ 229 (348)
Q Consensus 153 ~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~~a~f~~~ 229 (348)
+. ++.++-.-+ +++. . | + + ...+..+++-|.+.+ |-+++..|--..+ +
T Consensus 189 ~d--P~a~L~~Nd-yn~~---~-~--~--k---~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~---------------p 239 (378)
T 1ur1_A 189 VD--PKAHLMYND-YNIE---R-T--G--K---REATVEMIERLQKRGMPIHGLGIQGHLGIDT---------------P 239 (378)
T ss_dssp HC--TTSEEEEEE-SSTT---S-T--T--H---HHHHHHHHHHHHHTTCCCCEEEECCEEESSC---------------S
T ss_pred hC--CCCEEEecc-cccc---c-c--c--h---hHHHHHHHHHHHHCCCCcceEEecCcCCCCC---------------C
Confidence 32 234554433 1100 0 1 0 0 112234555454443 5555544421000 0
Q ss_pred CceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC----CC-----------------CCC---HH
Q 018955 230 QTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD----GA-----------------LTN---VD 285 (348)
Q Consensus 230 ~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~----~~-----------------vas---~~ 285 (348)
+ .+.+..+|++++--+++|.|||.++++...+ |. ..+ .+
T Consensus 240 ------------~-----~~~i~~~l~~~a~~Gl~i~iTElDi~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 302 (378)
T 1ur1_A 240 ------------P-----IAEIEKSIIAFAKLGLRVHFTSLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQD 302 (378)
T ss_dssp ------------C-----HHHHHHHHHHHHTTTCEEEEEEEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHH
T ss_pred ------------C-----HHHHHHHHHHHHhcCCeEEEEecccCCCCccccccccccccccccccccccccCCCCHHHHH
Confidence 0 1122233343433567999999999986420 00 012 45
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCcc-EEEEEeecC-CCCCC-C--CCCCceeeecCCCCeeee
Q 018955 286 NARTYNNNLIQHVKRGSPKRPGRPIE-TYIFAMFDE-NGKTG-P--EIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 286 na~~y~~~~~~~~~~gtp~~~~~~~~-~f~F~~fDe-~wK~~-~--~~E~~wGl~~~d~~~ky~ 344 (348)
.|+.+++.+++.+.+ .|. .+. +.+..+-|. .|+++ + +...+-+||+.|.+||..
T Consensus 303 ~QA~~y~~~~~~~~~----~~~-~V~git~WG~~D~~sW~~~~p~~g~~~~plLfd~~~~pKpA 361 (378)
T 1ur1_A 303 KLAKRYEDLFKLFIK----HSD-KIDRATFWGVSDDASWLNGFPIPGRTNYPLLFDRKLQPKDA 361 (378)
T ss_dssp HHHHHHHHHHHHHHH----TTT-TEEEEEESCSBGGGCGGGTSSSTTCCCCCSSBCTTSCBCHH
T ss_pred HHHHHHHHHHHHHHh----ccC-ceeEEEEECCccCCCcCCCCCCCCCCCcceeECCCCCCCHH
Confidence 678888888887752 221 255 444444443 68864 2 223345799999999964
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=98.08 E-value=0.00014 Score=72.76 Aligned_cols=127 Identities=12% Similarity=0.114 Sum_probs=77.9
Q ss_pred CeeeEEecC-CCCCCCCHHHHHHHHhhCCCCeEEE-------ecCC-----hHHHHHHhcCCCEEEEecCCCchhhhhhc
Q 018955 33 AQIGVCYGM-LGNNLPSKRDVIALYNQNNIRRMRL-------YDPN-----REALEALRGSNIEVMLGLPNNDLRRIASN 99 (348)
Q Consensus 33 ~~~Gi~Y~~-~~~~~~s~~~v~~ll~~~~~~~VRl-------Y~~d-----~~vl~A~~~~glkV~lGv~~~~~~~~a~~ 99 (348)
...|||++. +.. +-.++.++.+++.|++.||+ |..+ ..++..|.+.||.|+|-+.......-...
T Consensus 26 ~lrGvN~~~~W~~--~~~~~di~~ik~~G~N~VRipv~~g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~~~~~~ 103 (464)
T 1wky_A 26 VMRGINHGHAWYK--DQATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDSIAS 103 (464)
T ss_dssp CCEEEEECGGGCG--GGHHHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCCHHH
T ss_pred EEEEEEeCcccCC--cchHHHHHHHHHCCCCEEEEEcCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCChHH
Confidence 357999852 221 11356778889999999999 4433 37888899999999998875321000012
Q ss_pred HHHHHHHHHhhccccCCC-ceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEee
Q 018955 100 QAEANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVST 163 (348)
Q Consensus 100 ~~~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT 163 (348)
.+...+..+.-..+|... ..| .+-++||+... -.+......++.+-+++++.+-..-|-|..
T Consensus 104 ~~~~~~~w~~iA~ryk~~~~~V-i~eL~NEP~~~-~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g 166 (464)
T 1wky_A 104 LNRAVDYWIEMRSALIGKEDTV-IINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDA 166 (464)
T ss_dssp HHHHHHHHHHTGGGTTTCTTTE-EEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCeE-EEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 233333223333444322 456 68999999753 134456667777888888877654355543
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00018 Score=69.38 Aligned_cols=128 Identities=14% Similarity=0.125 Sum_probs=80.6
Q ss_pred CeeeEEec-CCCCCCCCHHHHHHHHhhCCCCeEEEec-------CC-----hHHHHHHhcCCCEEEEecCCCchhhhhhc
Q 018955 33 AQIGVCYG-MLGNNLPSKRDVIALYNQNNIRRMRLYD-------PN-----REALEALRGSNIEVMLGLPNNDLRRIASN 99 (348)
Q Consensus 33 ~~~Gi~Y~-~~~~~~~s~~~v~~ll~~~~~~~VRlY~-------~d-----~~vl~A~~~~glkV~lGv~~~~~~~~a~~ 99 (348)
...||||. .+. .+..++.++.+++.|++.||++- .+ ..++..+.+.||+|+|-+....-..-...
T Consensus 41 ~lrGvn~~~~~~--~~~~~~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~~~~~ 118 (345)
T 3jug_A 41 VMKGINHGHAWY--KDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRDSRSD 118 (345)
T ss_dssp CCEEEEECGGGC--GGGHHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCCHHH
T ss_pred EEeccccccccc--ChHHHHHHHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCcHHH
Confidence 36799984 111 11224678888999999999972 22 36889999999999999886321000011
Q ss_pred HHHHHHHHHhhccccCCC-ceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeee
Q 018955 100 QAEANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTA 164 (348)
Q Consensus 100 ~~~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~ 164 (348)
.+...++.++-+..|... ..| .+-++||+.... .......+++.+-+++++.+-..-|-|+..
T Consensus 119 ~~~~~~~w~~iA~ryk~~~~~V-i~el~NEP~~~~-~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~ 182 (345)
T 3jug_A 119 LDRAVDYWIEMKDALIGKEDTV-IINIANEWYGSW-DGAAWADGYIDVIPKLRDAGLTHTLMVDAA 182 (345)
T ss_dssp HHHHHHHHHHTHHHHTTCTTTE-EEECCTTCCCSS-CHHHHHHHHHHHHHHHHHTTCCSCEEEECB
T ss_pred HHHHHHHHHHHHHHHcCCCCeE-EEEecCCCCCCC-CHHHHHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 233334334444455332 456 599999997621 345566777888888888876544555554
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=98.06 E-value=0.00011 Score=69.72 Aligned_cols=126 Identities=12% Similarity=0.022 Sum_probs=74.3
Q ss_pred eeeEEecCCCCC-C-C--------CHHHHHHHHhhCCCCeEEEe------cC-------C-------hHHHHHHhcCCCE
Q 018955 34 QIGVCYGMLGNN-L-P--------SKRDVIALYNQNNIRRMRLY------DP-------N-------REALEALRGSNIE 83 (348)
Q Consensus 34 ~~Gi~Y~~~~~~-~-~--------s~~~v~~ll~~~~~~~VRlY------~~-------d-------~~vl~A~~~~glk 83 (348)
..|+|++..-+. . + ..++.++.+++.|++.||+- .. + ..++..+.+.||+
T Consensus 5 ~~G~Nlg~~~~~~~~~~~~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~ 84 (343)
T 1ceo_A 5 KAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLG 84 (343)
T ss_dssp SEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCE
T ss_pred cceeehhhhhccCCccchhhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCE
Confidence 579999865332 1 1 11456788899999999984 11 1 2577888899999
Q ss_pred EEEecCCCchh--------hhhhc---HHHHHHHHHhhccccCCC-ceEEEEEecccccCCCcchHHHHHHHHHHHHHHH
Q 018955 84 VMLGLPNNDLR--------RIASN---QAEANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAIN 151 (348)
Q Consensus 84 V~lGv~~~~~~--------~~a~~---~~~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~ 151 (348)
|+|.+...... .+-.+ .+...+..+ .|...+.+ ..|.++-+.||+... ....+.++++.+-++++
T Consensus 85 vildlh~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~ia~~~~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~IR 161 (343)
T 1ceo_A 85 LVLDMHHAPGYRFQDFKTSTLFEDPNQQKRFVDIWR-FLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIR 161 (343)
T ss_dssp EEEEEEECCC--------CCTTTCHHHHHHHHHHHH-HHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCccccCCCCcccCcCCHHHHHHHHHHHH-HHHHHhcCCCCeEEEEeccCCCCc--chHHHHHHHHHHHHHHH
Confidence 99987653100 00011 222222222 23332332 356799999999754 24556667777777777
Q ss_pred HcCCCCceEEe
Q 018955 152 AAGLGNQIKVS 162 (348)
Q Consensus 152 ~~gl~~~I~Vs 162 (348)
+.+-..-|-|+
T Consensus 162 ~~~p~~~i~v~ 172 (343)
T 1ceo_A 162 EIDSTMWLYIG 172 (343)
T ss_dssp HHCSSCCEEEE
T ss_pred hhCCCCEEEEe
Confidence 76543324443
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00092 Score=62.12 Aligned_cols=118 Identities=12% Similarity=0.142 Sum_probs=73.2
Q ss_pred CeeeEEecCCCCC-----CCCHHHHHHHHh-hCCCCeEEEe-cC----------Ch--------HHHHHHhcCCCEEEEe
Q 018955 33 AQIGVCYGMLGNN-----LPSKRDVIALYN-QNNIRRMRLY-DP----------NR--------EALEALRGSNIEVMLG 87 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~-----~~s~~~v~~ll~-~~~~~~VRlY-~~----------d~--------~vl~A~~~~glkV~lG 87 (348)
...|+|+.-.... ..+ ++.++.++ ..|++.||+- .. ++ .++..|.+.||+|+|.
T Consensus 20 ~l~Gvn~~~~~~~~~~~~~~~-~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild 98 (293)
T 1tvn_A 20 SFAGPSLFWSNTGWGAEKFYT-AETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIID 98 (293)
T ss_dssp CCEEEEECCCCTTSSCGGGCS-HHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeeeecccccccCCCCCCC-HHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3569998632211 123 45667777 4899999994 11 32 4788889999999999
Q ss_pred cCCCchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCC
Q 018955 88 LPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLG 156 (348)
Q Consensus 88 v~~~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~ 156 (348)
+....... ..+...+..+.-+.+|.....|- .-++||+.... ....+.++++.+-+++++.+-.
T Consensus 99 ~h~~~~~~---~~~~~~~~~~~~a~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~ 162 (293)
T 1tvn_A 99 FHSHEAHT---DQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQIS-WVNDIKPYAETVIDKIRAIDPD 162 (293)
T ss_dssp EECSCGGG---CHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHTTCCS
T ss_pred cCCCCccc---cHHHHHHHHHHHHHHhCCCCeEE-EEccCCCCCCc-hHHHHHHHHHHHHHHHHhhCCC
Confidence 87643221 12333333333344443223465 99999986531 1246777888888888887654
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00052 Score=63.70 Aligned_cols=123 Identities=18% Similarity=0.206 Sum_probs=73.4
Q ss_pred CeeeEEecCCCC-----CCCCHHHHHHHHh-hCCCCeEEEec---------CCh--------HHHHHHhcCCCEEEEecC
Q 018955 33 AQIGVCYGMLGN-----NLPSKRDVIALYN-QNNIRRMRLYD---------PNR--------EALEALRGSNIEVMLGLP 89 (348)
Q Consensus 33 ~~~Gi~Y~~~~~-----~~~s~~~v~~ll~-~~~~~~VRlY~---------~d~--------~vl~A~~~~glkV~lGv~ 89 (348)
...|+|+.-... ...+ ++.++.++ +.|++.||+-- .++ .++..+.+.||+|++.+.
T Consensus 20 ~l~Gvn~~~~~~~~~~~~~~~-~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h 98 (291)
T 1egz_A 20 SFAGNSLFWSNNGWGGEKFYT-ADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDMYAIIGWH 98 (291)
T ss_dssp CCEEEEEEECCTTSSGGGGCS-HHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEeecccccccCCCccCC-HHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 356888762211 1122 45666677 89999999941 132 478888999999999987
Q ss_pred CCchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEE
Q 018955 90 NNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKV 161 (348)
Q Consensus 90 ~~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~V 161 (348)
....+. ..+...+..+.-+..|.....|- .-++||+-... ..+.+.++++.+-+++++.+-..-|-|
T Consensus 99 ~~~~~~---~~~~~~~~~~~ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v 165 (291)
T 1egz_A 99 SHSAEN---NRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIV 165 (291)
T ss_dssp CSCGGG---GHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEE
T ss_pred CCCcch---hHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 643222 22333333333344443223465 99999997531 224566777777777777764432333
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00013 Score=70.00 Aligned_cols=254 Identities=14% Similarity=0.068 Sum_probs=134.9
Q ss_pred CCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe-cC------------C----hHHHHHHhcCCCEEEEe--cCCCc
Q 018955 32 SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY-DP------------N----REALEALRGSNIEVMLG--LPNND 92 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY-~~------------d----~~vl~A~~~~glkV~lG--v~~~~ 92 (348)
.-.+|.||.+.. -.+..+++++ +|+.|+.= .. + ..++..+++.||+|... +|...
T Consensus 15 ~~~~G~a~~~~~-----~~~~~~~~~~-~fn~vt~eN~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~q 88 (331)
T 1n82_A 15 DFRIGAAVNPVT-----IEMQKQLLID-HVNSITAENHMKFEHLQPEEGKFTFQEADRIVDFACSHRMAVRGHTLVWHNQ 88 (331)
T ss_dssp TCEEEEEECHHH-----HHHTHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEEESSS
T ss_pred cCEEEEEcChhh-----CHHHHHHHHh-cCCEEEECCcccHHHhCCCCCccChHHHHHHHHHHHHCCCEEEEEeeecCCC
Confidence 457899998764 2345667754 58888882 11 1 36888888999999765 46655
Q ss_pred hhhhhh------------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC-------cchHHH--HHHHHHHHHHHH
Q 018955 93 LRRIAS------------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-------NFAQYL--VPAMRNIQNAIN 151 (348)
Q Consensus 93 ~~~~a~------------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-------~~~~~L--l~~i~~v~~~L~ 151 (348)
.+..-. -.+...+++++-+..| + ..|...-|.||++... ....+. -.+|+..-+..+
T Consensus 89 ~P~W~~~~~~g~~~~~~~~~~~~~~~i~~v~~rY-~-g~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i~~af~~Ar 166 (331)
T 1n82_A 89 TPDWVFQDGQGHFVSRDVLLERMKCHISTVVRRY-K-GKIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAY 166 (331)
T ss_dssp CCGGGGBCSSSSBCCHHHHHHHHHHHHHHHHHHH-T-TTCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHH
T ss_pred CChhhccCCCCCCCCHHHHHHHHHHHHHHHHHHh-c-CCceEEeeecccccCCCccccccchHHHhcCHHHHHHHHHHHH
Confidence 444221 1244556666666666 3 3799999999998632 111111 123333333333
Q ss_pred HcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCcccccccc
Q 018955 152 AAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLDYALFRS 228 (348)
Q Consensus 152 ~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~~a~f~~ 228 (348)
++ +++.++-.-+ +++.. | + + ...+..+++.|.+.+ |-+++..|- ...
T Consensus 167 ~~--dP~a~L~~Nd-yn~~~----~--~--k---~~~~~~~v~~l~~~g~~idgiG~Q~H~--~~~-------------- 216 (331)
T 1n82_A 167 EA--DPDALLFYND-YNECF----P--E--K---REKIFALVKSLRDKGIPIHGIGMQAHW--SLT-------------- 216 (331)
T ss_dssp HH--CTTSEEEEEE-SSTTS----H--H--H---HHHHHHHHHHHHHTTCCCCEEEECCEE--ESS--------------
T ss_pred HH--CCCCEEEEec-ccCCC----c--h--h---HHHHHHHHHHHHHCCCccceEEeceec--CCC--------------
Confidence 32 2335554333 11110 1 0 0 112233444444433 444433332 100
Q ss_pred CCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC-CC--C--CC---HHHHHHHHHHHHHHHHh
Q 018955 229 QQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD-GA--L--TN---VDNARTYNNNLIQHVKR 300 (348)
Q Consensus 229 ~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~-~~--v--as---~~na~~y~~~~~~~~~~ 300 (348)
|.+ .+.+..+|+++.-.++||+|||.++++.... +. . ++ .+.|+.+++.++..+.+
T Consensus 217 -----------~~~-----~~~~~~~l~~~a~~G~pi~iTEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~ 280 (331)
T 1n82_A 217 -----------RPS-----LDEIRAAIERYASLGVVLHITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKE 280 (331)
T ss_dssp -----------SSC-----HHHHHHHHHHHHTTTCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------CCC-----HHHHHHHHHHHHhcCCeEEEEeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 000 1112222333333467999999999986431 10 0 12 45678888888887742
Q ss_pred cCCCCCCCCcc-EEEEEeecC-CCCCC-CC--CCCceeeecCCCCeeee
Q 018955 301 GSPKRPGRPIE-TYIFAMFDE-NGKTG-PE--IERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 301 gtp~~~~~~~~-~f~F~~fDe-~wK~~-~~--~E~~wGl~~~d~~~ky~ 344 (348)
.|. .+. +.+-.+-|. .|+++ +. ...+.|||+.|++||..
T Consensus 281 ----~~~-~v~git~Wg~~D~~sW~~~~p~~g~~~~~~Lfd~~~~pKpA 324 (331)
T 1n82_A 281 ----YRD-VIQSVTFWGIADDHTWLDNFPVHGRKNWPLLFDEQHKPKPA 324 (331)
T ss_dssp ----TTT-TEEEEEESCSBTTSCGGGTSSSTTCCCCCSSBCTTSCBCHH
T ss_pred ----CcC-cccEEEEECCCCCCccCCCCCCCCCCCccccCCCCCCCCHH
Confidence 221 255 444445553 68764 21 23446999999999964
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00013 Score=67.10 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=78.0
Q ss_pred CeeeEEecC--CCCCCC------CH---HHHHHHHhhCCCCeEEEecC----------------------C-----hHHH
Q 018955 33 AQIGVCYGM--LGNNLP------SK---RDVIALYNQNNIRRMRLYDP----------------------N-----REAL 74 (348)
Q Consensus 33 ~~~Gi~Y~~--~~~~~~------s~---~~v~~ll~~~~~~~VRlY~~----------------------d-----~~vl 74 (348)
-+.|+|+.. ++.+.+ ++ ++.++++|+.|++.||++.. + ..++
T Consensus 17 ~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 96 (351)
T 3vup_A 17 FLSGGNLPWMSYAYDFGDGQWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLL 96 (351)
T ss_dssp CEEEEECCCSSTTCSSSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHH
T ss_pred EEEEEecCccccccccCcccCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHH
Confidence 367999853 333332 12 34567889999999999621 1 3578
Q ss_pred HHHhcCCCEEEEecCCCch--------hhhhhcHH----HHHHHHHhhccccCCCceEEEEEecccccCCC---------
Q 018955 75 EALRGSNIEVMLGLPNNDL--------RRIASNQA----EANTWVQNNVRNFANNVKFKYIAVGNEAKPGD--------- 133 (348)
Q Consensus 75 ~A~~~~glkV~lGv~~~~~--------~~~a~~~~----~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~--------- 133 (348)
..|.+.||+|++-+++... .....+.. ...+.++..+.+|.....|....+|||+....
T Consensus 97 ~~a~~~Gi~vil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~ 176 (351)
T 3vup_A 97 DTAKKYNILVFPCLWNAAVNQDSHNRLDGLIKDQHKLQSYIDKALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEK 176 (351)
T ss_dssp HHHHHTTCEEEEEEEECSSCCCGGGHHHHHHHCHHHHHHHHHHTHHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSG
T ss_pred HHHHHCCCeEEEEecccccccCCCCccccccCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEeccccccccccccccccc
Confidence 8899999999998875421 01111111 12222344455554345677899999974310
Q ss_pred ------------------cchHHHHHHHHHHHHHHHHcCCCCceEEee
Q 018955 134 ------------------NFAQYLVPAMRNIQNAINAAGLGNQIKVST 163 (348)
Q Consensus 134 ------------------~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT 163 (348)
...+.+...++.+.+.+++..-. .+|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~dp~--~lv~~ 222 (351)
T 3vup_A 177 CYDTTALKNSGAGWAGNKYLYQDILRFLNWQADAIKTTDPG--ALVTM 222 (351)
T ss_dssp GGCCGGGTTSSTTTTCSCBCHHHHHHHHHHHHHHHHHHSTT--CCEEE
T ss_pred ccccchhhcccccccccccchhhHHHHHHHHHHHhhccCCC--CeeEe
Confidence 12456777788888888876543 34543
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00016 Score=72.45 Aligned_cols=254 Identities=17% Similarity=0.181 Sum_probs=133.1
Q ss_pred eeeEEecCCCC----CCC-CHHHHH-HHHhhCCCCeEEEecC-----------C-------hHHHHHHhcCCCEEEEecC
Q 018955 34 QIGVCYGMLGN----NLP-SKRDVI-ALYNQNNIRRMRLYDP-----------N-------REALEALRGSNIEVMLGLP 89 (348)
Q Consensus 34 ~~Gi~Y~~~~~----~~~-s~~~v~-~ll~~~~~~~VRlY~~-----------d-------~~vl~A~~~~glkV~lGv~ 89 (348)
..|+|+..... ..+ .-++.+ +.+++.|++.||+.-. | ..+++.+++.||+|+|.+.
T Consensus 47 l~GvN~~~~~~~~~~g~~~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~Gi~vildlH 126 (481)
T 2osx_A 47 LRGFNTASSAKSAPDGMPQFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERGYKVMLDMH 126 (481)
T ss_dssp CEEEEECGGGGTCTTSCCSCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eeeEecCCCCCCCCCCCccccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 56999876421 112 124455 8899999999999621 1 2477888899999999864
Q ss_pred CC----c-----------------hhhh--------------------------------------hhcHHHHHHHHHhh
Q 018955 90 NN----D-----------------LRRI--------------------------------------ASNQAEANTWVQNN 110 (348)
Q Consensus 90 ~~----~-----------------~~~~--------------------------------------a~~~~~a~~wv~~~ 110 (348)
.+ . .+.. ....+...+.++.-
T Consensus 127 ~d~~~~~~~P~~~~~ng~~~gg~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~l 206 (481)
T 2osx_A 127 QDVYSGAITPEGNSGNGAGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAV 206 (481)
T ss_dssp CBSSCGGGSTTTCSBTTBCSSSBSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCCCCCccceeccCCCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHH
Confidence 31 0 0000 00122333333333
Q ss_pred ccccCCCceEEEEEecccccCCCc-----chHHHHHHHHHHHHHHHHcCCCCceEEeeeee-cc-ccccccCCCCccccc
Q 018955 111 VRNFANNVKFKYIAVGNEAKPGDN-----FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIE-TG-ALGESFPPSRGSFKQ 183 (348)
Q Consensus 111 v~~~~~~~~I~~I~VGNE~l~~~~-----~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~-~~-~~~~s~pPs~~~f~~ 183 (348)
...|.....|.+.-+.||+..... ..+.+.++++.+-+++++.+-. .+|..... ++ .|. ++ ..+.
T Consensus 207 a~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aIR~~dp~--~~I~v~~~~~~~~~~--~~---~~l~- 278 (481)
T 2osx_A 207 ADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQD--TWVCVAPQAIGVNQG--LP---SGLT- 278 (481)
T ss_dssp HHHHTTCTTEEEEECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHHTTTCSS--SEEEECCCSTTGGGT--CC---CCCC-
T ss_pred HHHhcCCCcEEEEEeecCCCCCCCCCccccHHHHHHHHHHHHHHHHhhCCC--cEEEEcCcccccccC--CC---CCCc-
Confidence 444433456999999999976421 2466788888888888887643 34443321 11 111 00 0111
Q ss_pred CccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCc
Q 018955 184 DYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSL 263 (348)
Q Consensus 184 d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~ 263 (348)
..-.|. .....+++.+|.|+++..... +| .+ . . ...+...++..++.+...+++. +++
T Consensus 279 ---~~~~p~---~~~~~~v~s~H~Y~~~~~~~~-----~~---~~--~--~--~~~~~~~~~~~~~~~~~~~~~~--~g~ 336 (481)
T 2osx_A 279 ---KIDDPR---AGQQRIAYCPHLYPLPLDIGD-----GH---EG--L--A--RTLTDVTIDAWRANTAHTARVL--GDV 336 (481)
T ss_dssp ---CCCCCS---SSSCCEEECCBCCCHHHHHTT-----SS---SH--H--H--HHHHHHHHHHHHHHHHHHHHHT--TSC
T ss_pred ---ccCCCc---ccCCCEEEEEEecCcccccCC-----cc---Cc--c--c--hhhHHHHHHHHHHHHHHHHHHh--cCC
Confidence 000010 012346778888876421100 01 00 0 0 0001122333333333333443 267
Q ss_pred cEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCee
Q 018955 264 GIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPR 342 (348)
Q Consensus 264 ~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~k 342 (348)
||+|+|.|++.. . + .+..|.+.+++.+++ .++..+ |..++ ++ .||+++.||+++
T Consensus 337 Pv~igEfG~~~~---~--~---~~~~~~~~~~~~~~~-------~~ig~~-~W~~~----~g-----~~G~~~~~g~~~ 390 (481)
T 2osx_A 337 PIILGSFGLDTT---L--P---GARDYIERVYGTARE-------MGAGVS-YWSSD----PG-----PWGPYLPDGTQT 390 (481)
T ss_dssp CBEECBCCCCTT---S--T---THHHHHHHHHHHHHH-------HTCEEE-ESCCS----SS-----TTSSBCTTSCBC
T ss_pred CEEEeccCCCCC---c--h---HHHHHHHHHHHHHHH-------cCCCeE-EECCC----CC-----CCCccCCCCcch
Confidence 999999997642 1 2 356777888777642 134433 33332 21 289999888654
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00019 Score=68.24 Aligned_cols=132 Identities=10% Similarity=-0.065 Sum_probs=80.5
Q ss_pred CCCeeeEEecCCCCCC---CCHHHHHHHHhhCCCCeEEEe------cC-------C-------hHHHHHHhcCCCEEEEe
Q 018955 31 TSAQIGVCYGMLGNNL---PSKRDVIALYNQNNIRRMRLY------DP-------N-------REALEALRGSNIEVMLG 87 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~---~s~~~v~~ll~~~~~~~VRlY------~~-------d-------~~vl~A~~~~glkV~lG 87 (348)
..-..|+|++..-... ...++.++.+++.|++.||+- .. + ..++..+.+.||+|+|.
T Consensus 17 ~~~~~GvNlg~~~~~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vild 96 (341)
T 1vjz_A 17 IPRWRGFNLLEAFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICIS 96 (341)
T ss_dssp CCCCEEEECCTTSSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEE
T ss_pred ccccceecccccccCCCCCCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 4557899998654321 234677888999999999994 11 1 26788888999999996
Q ss_pred cCCCch-----------hhh--hhcHHHHHHHHHhhccccCCC-ceEEEEEecccccCCCc---chHHHHHHHHHHHHHH
Q 018955 88 LPNNDL-----------RRI--ASNQAEANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDN---FAQYLVPAMRNIQNAI 150 (348)
Q Consensus 88 v~~~~~-----------~~~--a~~~~~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~---~~~~Ll~~i~~v~~~L 150 (348)
+..... ... ....+...+..+.-...|... ..|.++-+.||+..... ....+.++++.+-+++
T Consensus 97 lh~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~I 176 (341)
T 1vjz_A 97 LHRAPGYSVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEI 176 (341)
T ss_dssp EEEETTEESCTTSCCSSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHH
T ss_pred ecCCCCcccccCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 643100 000 011223333233333344222 45679999999876421 3477788888888888
Q ss_pred HHcCCCCceEEe
Q 018955 151 NAAGLGNQIKVS 162 (348)
Q Consensus 151 ~~~gl~~~I~Vs 162 (348)
++.+-..-|-|+
T Consensus 177 R~~~~~~~I~v~ 188 (341)
T 1vjz_A 177 RKIDPERLIIID 188 (341)
T ss_dssp HHHCTTCCEEEE
T ss_pred HhhCCCcEEEEc
Confidence 877643324444
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00044 Score=64.94 Aligned_cols=129 Identities=17% Similarity=0.147 Sum_probs=77.2
Q ss_pred CeeeEEecCCC--CCCCCHHHHHHHHhhCCCCeEEE--------ecCC-------hHHHHHHhcCCCEEEEecCCCchhh
Q 018955 33 AQIGVCYGMLG--NNLPSKRDVIALYNQNNIRRMRL--------YDPN-------REALEALRGSNIEVMLGLPNNDLRR 95 (348)
Q Consensus 33 ~~~Gi~Y~~~~--~~~~s~~~v~~ll~~~~~~~VRl--------Y~~d-------~~vl~A~~~~glkV~lGv~~~~~~~ 95 (348)
...|||..... ...-+.+++..|.++.|++.||+ |-.+ ..++..|.+.||+|+|-+.......
T Consensus 28 ~lrGvn~~~~~~~~~~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~ 107 (303)
T 7a3h_A 28 QLKGMSSHGLQWYGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDND 107 (303)
T ss_dssp CCEEEEESCHHHHGGGCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCS
T ss_pred EEEEeccCccccccccCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCCC
Confidence 45688864211 11233444444545789999999 3223 2468888899999999988632100
Q ss_pred hhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcc-hHHHHHHHHHHHHHHHHcCCCCceEEe
Q 018955 96 IASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNF-AQYLVPAMRNIQNAINAAGLGNQIKVS 162 (348)
Q Consensus 96 ~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~-~~~Ll~~i~~v~~~L~~~gl~~~I~Vs 162 (348)
-....+.+.++.+.-+..|.....|. +-++||+...... ...+.++++.+-+++++.+-..-|-|+
T Consensus 108 ~~~~~~~~~~~w~~ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~ 174 (303)
T 7a3h_A 108 PNIYKEEAKDFFDEMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVG 174 (303)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEEC
T ss_pred chHHHHHHHHHHHHHHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 01112333343344444453334566 9999999864322 246778888888888888754434444
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=97.93 E-value=0.0005 Score=66.41 Aligned_cols=261 Identities=13% Similarity=0.050 Sum_probs=145.7
Q ss_pred CCCeeeEEecCCC---CCCCCHHHHHHHHhhCCCCeEEE--------------ecCC--hHHHHHHhcCCCEEEEe--cC
Q 018955 31 TSAQIGVCYGMLG---NNLPSKRDVIALYNQNNIRRMRL--------------YDPN--REALEALRGSNIEVMLG--LP 89 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~---~~~~s~~~v~~ll~~~~~~~VRl--------------Y~~d--~~vl~A~~~~glkV~lG--v~ 89 (348)
..-.+|.||.+.. ..++.+ +..+++++ .|+.|++ |+-. ..++.-+++.||+|... +|
T Consensus 7 ~~f~~G~a~~~~~~~~~~~~~~-~~~~~~~~-~fn~vt~en~~kW~~~ep~~G~~f~~~D~~v~~a~~~gi~v~ghtl~W 84 (348)
T 1w32_A 7 ADFPIGVAVAASGGNADIFTSS-ARQNIVRA-EFNQITAENIMKMSYMYSGSNFSFTNSDRLVSWAAQNGQTVHGHALVW 84 (348)
T ss_dssp CSSCEEEEEBCSSSTTBTTTCH-HHHHHHHH-HCSEEEESSTTSGGGGEETTEECCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCeEEEEccCcccchhhcCcH-HHHHHHHh-hCCeEEECCccchhhhccCCCCCchHHHHHHHHHHHCCCEEEEEeeec
Confidence 3457899998832 224443 66777754 4899988 2222 36888899999999877 67
Q ss_pred CC--chhhhhh-----cHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----------c----c-hHHH--HHHHH
Q 018955 90 NN--DLRRIAS-----NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----------N----F-AQYL--VPAMR 144 (348)
Q Consensus 90 ~~--~~~~~a~-----~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----------~----~-~~~L--l~~i~ 144 (348)
.. ..+.... -.+.+.++|++-+..| + ..|..--|.||.+..+ . . ...| ..+|+
T Consensus 85 ~~~~q~P~W~~~~~~~~~~~~~~~i~~v~~rY-~-g~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~lgG~~~i~ 162 (348)
T 1w32_A 85 HPSYQLPNWASDSNANFRQDFARHIDTVAAHF-A-GQVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYID 162 (348)
T ss_dssp CCGGGCCTTCSTTCTTHHHHHHHHHHHHHHHT-T-TTCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHH
T ss_pred CccccCchhhhcCCHHHHHHHHHHHHHHHHHh-C-CceeEEEeecccccCCccccCCcccccccccchHHHhcCchHHHH
Confidence 66 4444221 2456677777777776 3 4799999999998642 1 1 1222 24554
Q ss_pred HHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCc
Q 018955 145 NIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISL 221 (348)
Q Consensus 145 ~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~ 221 (348)
..-+.-+++. ++.++-.-+ +++.. .|. -...+..+++.|.+.+ |-+++..|-...+
T Consensus 163 ~aF~~Ar~ad--P~a~L~~ND-yn~~~---~~~-------k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~-------- 221 (348)
T 1w32_A 163 EAFRRARAAD--PTAELYYND-FNTEE---NGA-------KTTALVNLVQRLLNNGVPIDGVGFQMHVMNDY-------- 221 (348)
T ss_dssp HHHHHHHHHC--TTSEEEEEE-SSTTS---CSH-------HHHHHHHHHHHHHHTTCCCCEEEECCEEESSS--------
T ss_pred HHHHHHHHhC--CCCEEEecc-ccccc---CCc-------hHHHHHHHHHHHHHCCCcccEEEeccccCCCC--------
Confidence 4444444432 335554332 11110 010 0122344555555544 5555444431110
Q ss_pred cccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhC--CCCccEEEeeeccCCCCC------CCC--CC-------CH
Q 018955 222 DYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTG--GGSLGIVISESGWPTAGG------DGA--LT-------NV 284 (348)
Q Consensus 222 ~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g--~~~~~v~I~ETGWPS~G~------~~~--va-------s~ 284 (348)
.+ .+.+..+|+++. ..+++|.|||-++++... +.. .+ ..
T Consensus 222 -------------------p~-----~~~~~~~l~~~a~~~~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~ 277 (348)
T 1w32_A 222 -------------------PS-----IANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGL 277 (348)
T ss_dssp -------------------SC-----HHHHHHHHHHHHTTCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHH
T ss_pred -------------------CC-----HHHHHHHHHHHhcccCCCeEEEEeCcccCCCcccccccccccCCCccccchhHH
Confidence 00 122334445555 567899999999997642 110 01 14
Q ss_pred HHHHHHHHHHHHHHH--hcCCCCCCCCccEEEEE-eec-CCCCCC-CCCCCceeeecCCCCeeeec
Q 018955 285 DNARTYNNNLIQHVK--RGSPKRPGRPIETYIFA-MFD-ENGKTG-PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 285 ~na~~y~~~~~~~~~--~gtp~~~~~~~~~f~F~-~fD-e~wK~~-~~~E~~wGl~~~d~~~ky~l 345 (348)
+.|+.+++.+++.+. +- .+ .+.-+.+. +-| ..|.+. .+.+.+=+||+.|++||...
T Consensus 278 ~~QA~~y~~~~~~~~~~~~---~~--~v~git~WG~~D~~sW~~p~~g~~~~plLfd~~~~pKpAy 338 (348)
T 1w32_A 278 DRQKARYKEIVQAYLEVVP---PG--RRGGITVWGIADPDSWLYTHQNLPDWPLLFNDNLQPKPAY 338 (348)
T ss_dssp HHHHHHHHHHHHHHHHHSC---TT--CEEEEEESCSBGGGSTTSEETTEECCCSSBCTTSCBCHHH
T ss_pred HHHHHHHHHHHHHHhcccc---CC--ceEEEEEECCccCCccCCCcCCCCCCCeeECCCCCCCHHH
Confidence 567778888888774 10 12 35434444 444 368761 12245568999999999643
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00074 Score=70.18 Aligned_cols=154 Identities=19% Similarity=0.213 Sum_probs=99.9
Q ss_pred eeEEecCCCCCCCC--HHHHHHHHhhCCCCeEEEec-------CC---------hHHHHHHhcCCCEEEEecCCCchhhh
Q 018955 35 IGVCYGMLGNNLPS--KRDVIALYNQNNIRRMRLYD-------PN---------REALEALRGSNIEVMLGLPNNDLRRI 96 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s--~~~v~~ll~~~~~~~VRlY~-------~d---------~~vl~A~~~~glkV~lGv~~~~~~~~ 96 (348)
+|+||-|-+ .|. -+++++++|..|++.||++- +. ..++..+.+.||+|+++++....+..
T Consensus 2 ~G~~y~pe~--w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~~ld~~ld~a~~~Gi~vil~~~~~~~P~W 79 (645)
T 1kwg_A 2 LGVCYYPEH--WPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKW 79 (645)
T ss_dssp EEEECCGGG--SCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTTSCCHH
T ss_pred CCCcCCccc--CCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCCccChHHHHHHHHHHHHCCCEEEEeCCCCCCChh
Confidence 699998876 332 25567899999999999952 11 26899999999999998843221110
Q ss_pred ----------------------------h--hcHHHHHHHHHhhccccCCCceEEEEEecccccCCC---c---------
Q 018955 97 ----------------------------A--SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD---N--------- 134 (348)
Q Consensus 97 ----------------------------a--~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~---~--------- 134 (348)
. .-.+.+.+++++-+..|.....|.+..++||.-... .
T Consensus 80 l~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~NE~~~~~~~~~y~~~~~~~f 159 (645)
T 1kwg_A 80 LVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAF 159 (645)
T ss_dssp HHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTTTTSCCCSHHHHHHH
T ss_pred HhhcCCceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcCCCCCCCCcCCHHHHHHH
Confidence 0 112344455554455553335799999999986420 0
Q ss_pred ------------------------------------------------------chHHHHHHHHHHHHHHHHcCCCCceE
Q 018955 135 ------------------------------------------------------FAQYLVPAMRNIQNAINAAGLGNQIK 160 (348)
Q Consensus 135 ------------------------------------------------------~~~~Ll~~i~~v~~~L~~~gl~~~I~ 160 (348)
....+..+++.+.+++++.+- ++|
T Consensus 160 ~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~~~~~~~ir~~~p--~~p 237 (645)
T 1kwg_A 160 RGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAP--GKF 237 (645)
T ss_dssp HHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST--TCE
T ss_pred HHHHHHHhcCHHHHHHHhCccccccccCcHhhcCCCCccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCc
Confidence 013478889999999999853 479
Q ss_pred EeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccc
Q 018955 161 VSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYF 211 (348)
Q Consensus 161 VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff 211 (348)
|++.. +.. ++ .. +. .-+++..|+++.|.||.+
T Consensus 238 vt~n~----~~~-~~--------~~-d~-----~~~a~~lDv~~~d~Y~~~ 269 (645)
T 1kwg_A 238 VTHNF----MGF-FT--------DL-DA-----FALAQDLDFASWDSYPLG 269 (645)
T ss_dssp EECEE----CTT-CC--------SS-CH-----HHHGGGSSSEEEEECHHH
T ss_pred EEEeE----CcC-CC--------Cc-CH-----HHHHhcCcEEEECCCCcc
Confidence 99764 111 11 00 11 115677899999999974
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0016 Score=62.50 Aligned_cols=257 Identities=19% Similarity=0.209 Sum_probs=136.1
Q ss_pred CeeeEEecCCCCCC--------C-CHHHHHHHHhhCCCCeEEEe---c----C------C-------hHHHHHHhcCCCE
Q 018955 33 AQIGVCYGMLGNNL--------P-SKRDVIALYNQNNIRRMRLY---D----P------N-------REALEALRGSNIE 83 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~~--------~-s~~~v~~ll~~~~~~~VRlY---~----~------d-------~~vl~A~~~~glk 83 (348)
-..|+|.|-.-+.. | .-++.++.+++.|++.||+- . . + ..++..+.+.||+
T Consensus 19 m~~G~nlgn~~d~~~~e~~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~ 98 (345)
T 3ndz_A 19 MKVGWNLGNTMDAIGGETNWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMY 98 (345)
T ss_dssp HCSEEEETTSTTSTTSTTTTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCE
T ss_pred hCCCEeeCcCcCCCCCCCCCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCE
Confidence 35688888543221 1 23677888899999999984 1 1 1 2578888999999
Q ss_pred EEEecCCCchh------hhhhcHHHHHHHHHhhccccCCC-ceEEEEEecccccCCCc----------chHHHHHHHHHH
Q 018955 84 VMLGLPNNDLR------RIASNQAEANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDN----------FAQYLVPAMRNI 146 (348)
Q Consensus 84 V~lGv~~~~~~------~~a~~~~~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~----------~~~~Ll~~i~~v 146 (348)
|+|-+...... ......+...+ +.+.|...+.+ ..+..+-+-||+...+. ....|.++.+.+
T Consensus 99 vildlH~~~~w~~~~~~~~~~~~~~~~~-~w~~iA~~y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~ 177 (345)
T 3ndz_A 99 VIINLHHENEWLKPFYANEAQVKAQLTK-VWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTA 177 (345)
T ss_dssp EEECCCSCTTTCCCSTTTHHHHHHHHHH-HHHHHHHHTTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHHHHHHHHHH
T ss_pred EEEecCCccccccccccchHHHHHHHHH-HHHHHHHHHcCCCCceEEEeccCCCCCCcccccCCCCchhHHHHHHHHHHH
Confidence 99998764310 01111222222 22344444443 23558888999985321 235677888999
Q ss_pred HHHHHHcCCC---CceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccc
Q 018955 147 QNAINAAGLG---NQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDY 223 (348)
Q Consensus 147 ~~~L~~~gl~---~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~ 223 (348)
-+++++.|-. .-|-|.+.. |... ...+..+..-+....-.+.+|.|.-|....+
T Consensus 178 i~aIR~~g~~np~~~Iiv~g~~----~~~~------------~~~~~~~~~P~~~~n~v~s~H~Y~p~~f~~~------- 234 (345)
T 3ndz_A 178 VNAIRATGGNNATRYIMVPTLA----ASAM------------STTINDLVIPNNDSKVIVSLHMYSPYFFAMD------- 234 (345)
T ss_dssp HHHHHHTCGGGGTSCEEEECGG----GCCS------------HHHHHHCCCGGGCTTEEEEEECCCSHHHHTC-------
T ss_pred HHHHHhcCCCCCCcEEEECCCc----cCcc------------cchhhcccCCCCCCcEEEEEEecCchhcccC-------
Confidence 9999988632 235555432 2110 0000000000012233456666654332111
Q ss_pred cccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 018955 224 ALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSP 303 (348)
Q Consensus 224 a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp 303 (348)
..+... .......+.++..++.+...+.+ .++||+|+|.|-... .+.+....|++.+++.++
T Consensus 235 ----~~g~~~-w~~~~~~~~~~~~~~~~~~~~~~---~g~pv~iGEfG~~~~------~~~~~~~~~~~~~~~~~~---- 296 (345)
T 3ndz_A 235 ----INGTSS-WGSDYDKSSLDSEFDAVYNKFVK---NGRAVVIGEMGSINK------NNTAARVTHAEYYAKSAK---- 296 (345)
T ss_dssp ----TTSCSC-CCSHHHHHHHHHHHHHHHHHTGG---GTCCEEEEEECCCCS------SCHHHHHHHHHHHHHHHH----
T ss_pred ----CCCCcC-CCCcccHHHHHHHHHHHHHHHHH---cCCcEEEEeecCCCC------CCHHHHHHHHHHHHHHHH----
Confidence 000000 00000123444445544433333 457999999998744 334455678888888775
Q ss_pred CCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC
Q 018955 304 KRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT 338 (348)
Q Consensus 304 ~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d 338 (348)
+ .++..++-+. . ++. .+.+..||||+.+
T Consensus 297 -~--~gi~~~~W~~-g-~~~--~~~~~~fG~~dr~ 324 (345)
T 3ndz_A 297 -A--RGLTPIWWDN-G-YSV--AGKAETFGIFNRS 324 (345)
T ss_dssp -T--TTCEEEEEEC-S-CCC--TTSTTCCCCEETT
T ss_pred -H--CCCeEEEECC-C-CCC--CCCCcccceEECC
Confidence 2 2676654442 2 110 1225569999865
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0012 Score=64.09 Aligned_cols=276 Identities=13% Similarity=0.186 Sum_probs=138.8
Q ss_pred CeeeEEecCCCC----------CC--C-CHHHHHHHHhhCCCCeEEE---ec----C------C-------hHHHHHHhc
Q 018955 33 AQIGVCYGMLGN----------NL--P-SKRDVIALYNQNNIRRMRL---YD----P------N-------REALEALRG 79 (348)
Q Consensus 33 ~~~Gi~Y~~~~~----------~~--~-s~~~v~~ll~~~~~~~VRl---Y~----~------d-------~~vl~A~~~ 79 (348)
...|+|.+..-+ .. | .-+++++.+++.|++.||+ |. . + ..++..+.+
T Consensus 42 ~g~G~nlg~~~~~~~~~~~~~~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~ 121 (395)
T 2jep_A 42 MGAGWNLGNQLEAAVNGTPNETAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYN 121 (395)
T ss_dssp HCSEEEECSSTTCEETTEECTTTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHT
T ss_pred cCCceeeCcccccCCCCCCcccccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHH
Confidence 467999964321 11 1 1366788889999999998 32 1 1 246778889
Q ss_pred CCCEEEEecCCCchh----h--h------hhcHHHHHHHHHhhccccCC-CceEEEEEecccccCCC----c--chHHHH
Q 018955 80 SNIEVMLGLPNNDLR----R--I------ASNQAEANTWVQNNVRNFAN-NVKFKYIAVGNEAKPGD----N--FAQYLV 140 (348)
Q Consensus 80 ~glkV~lGv~~~~~~----~--~------a~~~~~a~~wv~~~v~~~~~-~~~I~~I~VGNE~l~~~----~--~~~~Ll 140 (348)
.||+|+|-+...... . . ....+...+.. +.|...+. ...|.++-+.||+.... . ....+.
T Consensus 122 ~Gi~vild~h~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~-~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~ 200 (395)
T 2jep_A 122 EGLYVIINIHGDGYNSVQGGWLLVNGGNQTAIKEKYKKVW-QQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLN 200 (395)
T ss_dssp TTCEEEECCCGGGCTTSTTCCCCTTCSCHHHHHHHHHHHH-HHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHH
T ss_pred CCCEEEEECCCccccCCCCccccCCcccHHHHHHHHHHHH-HHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHH
Confidence 999999988764110 0 0 00112222222 23333333 23566999999987531 1 235788
Q ss_pred HHHHHHHHHHHHcCC---CCceEEeeeeecc-cc--cc-cc-CCCCcccccCccchhhHHHHHHhhcCCccccccccccc
Q 018955 141 PAMRNIQNAINAAGL---GNQIKVSTAIETG-AL--GE-SF-PPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFA 212 (348)
Q Consensus 141 ~~i~~v~~~L~~~gl---~~~I~VsT~~~~~-~~--~~-s~-pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~ 212 (348)
++++.+-+++++.|- ..-|-|.... ++ .+ .+ .+ .|... +. +.++- -......+.+|.|+.|.
T Consensus 201 ~~~~~~~~aIR~~~~~np~~~I~v~g~~-~~~~~~~~~~~~~~p~d~-----~~--~~~i~--~~~~~~v~s~H~Y~~~~ 270 (395)
T 2jep_A 201 AYNQIFVDTVRQTGGNNNARWLLVPGWN-TNIDYTVGNYGFTLPTDN-----YR--SSAIP--SSQKRIMISAHYYSPWD 270 (395)
T ss_dssp HHHHHHHHHHHTSSGGGGTSCEEEECGG-GCHHHHHSSSSCCCCCCT-----TS--CTTSC--TTCCCEEEEEEECCSHH
T ss_pred HHHHHHHHHHHHhCCCCCCcEEEECCCc-cCcccccccccccCCCCc-----cc--cccCC--CCCCCEEEEEEecCCcc
Confidence 899999999998853 1124443321 11 01 00 01 01100 00 00000 00123366778887655
Q ss_pred ccCC-CCCCccccccccCCc-eeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHH
Q 018955 213 IAGN-RQISLDYALFRSQQT-VVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTY 290 (348)
Q Consensus 213 ~~~~-~~i~~~~a~f~~~~~-~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y 290 (348)
.... ... +..+...+. +.......-...++..++.+...+.+ .++||+|+|.|.+..+..+ ..+.+....|
T Consensus 271 ~~~~~~~~---~~~W~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~g~Pv~igEfG~~~~~~~~-~~~~~~~~~~ 343 (395)
T 2jep_A 271 FAGEENGN---ITQWGATSTNPAKKSTWGQEDYLESQFKSMYDKFVT---QGYPVVIGEFGSIDKTSYD-SSNNVYRAAY 343 (395)
T ss_dssp HHTCSSSS---CCBCSTTCSCGGGBCSSCSHHHHHHHHHHHHHHTGG---GTCCEEEEEECCCCCTTTC-TTHHHHHHHH
T ss_pred ccCccccc---ccccccccCCcccccccCcHHHHHHHHHHHHHHHHH---cCCCEEEeeccccCCCCcc-CCChHHHHHH
Confidence 3321 000 000100000 00000000012344444444333333 3579999999999876533 1344566688
Q ss_pred HHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCC
Q 018955 291 NNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQ 340 (348)
Q Consensus 291 ~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~ 340 (348)
.+.+++.+++ .++..+ |-.+... .+-.|||++.+..
T Consensus 344 ~~~~~~~~~~-------~~i~~~-~W~~~~~------~~~~~gl~~~~~~ 379 (395)
T 2jep_A 344 AKAVTAKAKK-------YKMVPV-YWDNGHN------GQHGFALFNRSNN 379 (395)
T ss_dssp HHHHHHHHHH-------TTCEEE-EEECSCC------STTCCCSEETTTT
T ss_pred HHHHHHHHHH-------CCCeEE-EECCCCC------CCCCcceeeCCCC
Confidence 8888888752 145544 3333321 1445899987643
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00077 Score=64.95 Aligned_cols=124 Identities=18% Similarity=0.193 Sum_probs=74.0
Q ss_pred eeeEEecCC--CCCCCCHHHHHHHHhhCCCCeEEE--------ecCC-------hHHHHHHhcCCCEEEEecCCCc--hh
Q 018955 34 QIGVCYGML--GNNLPSKRDVIALYNQNNIRRMRL--------YDPN-------REALEALRGSNIEVMLGLPNND--LR 94 (348)
Q Consensus 34 ~~Gi~Y~~~--~~~~~s~~~v~~ll~~~~~~~VRl--------Y~~d-------~~vl~A~~~~glkV~lGv~~~~--~~ 94 (348)
..|||+... ....-+.+++..+.++.|++.||+ |..+ ..++..+.+.||+|+|-+.... .+
T Consensus 39 lrGvn~~~~~~~~~~~~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g~~ 118 (364)
T 1g01_A 39 LRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDP 118 (364)
T ss_dssp CEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCT
T ss_pred EEEEecCcccccCCccCHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCC
Confidence 468987532 111223344444446899999999 3333 2578888999999999877631 11
Q ss_pred --hhhhcHHHHHHHHHhhccccC---CCceEEEEEecccccCCC--------c--chHHHHHHHHHHHHHHHHcCCCCce
Q 018955 95 --RIASNQAEANTWVQNNVRNFA---NNVKFKYIAVGNEAKPGD--------N--FAQYLVPAMRNIQNAINAAGLGNQI 159 (348)
Q Consensus 95 --~~a~~~~~a~~wv~~~v~~~~---~~~~I~~I~VGNE~l~~~--------~--~~~~Ll~~i~~v~~~L~~~gl~~~I 159 (348)
..-+ ....-| +.-...|. ....|- +-+.||+.... + ....+.++++.+-+++++.+ ..-|
T Consensus 119 ~~~~~~--~~~~~w-~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I 193 (364)
T 1g01_A 119 RADVYS--GAYDFF-EEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMI 193 (364)
T ss_dssp TSGGGT--THHHHH-HHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCE
T ss_pred ChHHHH--HHHHHH-HHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEE
Confidence 1101 112222 22233342 224674 99999997531 1 23567888999999999988 6545
Q ss_pred EEe
Q 018955 160 KVS 162 (348)
Q Consensus 160 ~Vs 162 (348)
-|+
T Consensus 194 ~v~ 196 (364)
T 1g01_A 194 LVG 196 (364)
T ss_dssp EEC
T ss_pred EEC
Confidence 444
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00064 Score=65.81 Aligned_cols=257 Identities=14% Similarity=0.094 Sum_probs=136.5
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEE-ecC--------------C--hHHHHHHhcCCCEEEEe--cCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRL-YDP--------------N--REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRl-Y~~--------------d--~~vl~A~~~~glkV~lG--v~~~ 91 (348)
..-.+|.||.+.. ++ .+..++++ .+|+.|++ ... + ..++.-+++.||+|... ||..
T Consensus 14 ~~f~~G~a~~~~~--~~--~~~~~l~~-~~fn~vt~en~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~ 88 (356)
T 2dep_A 14 DYFPIGAAIEPGY--TT--GQIAELYK-KHVNMLVAENAMKPASLQPTEGNFQWADADRIVQFAKENGMELRFHTLVWHN 88 (356)
T ss_dssp TTCCEEEEECGGG--SS--HHHHHHHH-HHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEEESS
T ss_pred hCCEEEEEcchhh--cC--HHHHHHHH-hhCCEEEECCcccHHHhcCCCCccCchHHHHHHHHHHHCCCEEEEeeccccc
Confidence 3457899998765 33 35677775 45999998 221 1 36888889999999765 4655
Q ss_pred chhhhhh-----------------------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC--c-----chHHH--
Q 018955 92 DLRRIAS-----------------------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD--N-----FAQYL-- 139 (348)
Q Consensus 92 ~~~~~a~-----------------------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~--~-----~~~~L-- 139 (348)
..+.... -.+.+.++|++-+..| + ..|...-|.||.+..+ . ...+.
T Consensus 89 q~P~W~~~~~~g~~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY-~-g~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G 166 (356)
T 2dep_A 89 QTPDWFFLDKEGKPMVEETDPQKREENRKLLLQRLENYIRAVVLRY-K-DDIKSWDVVNEVIEPNDPGGMRNSPWYQITG 166 (356)
T ss_dssp SCCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TTCCEEEEEECCBCTTSGGGBCCCHHHHHHT
T ss_pred cCchhhhccCcCCccccccccccCCCCHHHHHHHHHHHHHHHHHHh-C-CceeEEEeecccccCCCCCCccCChHHHhcc
Confidence 4433221 1234556666656666 3 3799999999998643 1 11111
Q ss_pred HHHHHHHHHHHHH-cCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccC
Q 018955 140 VPAMRNIQNAINA-AGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAG 215 (348)
Q Consensus 140 l~~i~~v~~~L~~-~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~ 215 (348)
-.+|+..-+..++ + +++.++-.-+ +++. . | . + ...+..+++.|.+. .|-+++..|-..++
T Consensus 167 ~~~i~~af~~Ar~~~--dP~a~L~~Nd-yn~~---~-~---~-k---~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~-- 230 (356)
T 2dep_A 167 TEYIEVAFRATREAG--GSDIKLYIND-YNTD---D-P---V-K---RDILYELVKNLLEKGVPIDGVGHQTHIDIYN-- 230 (356)
T ss_dssp THHHHHHHHHHHHHH--CSSSEEEEEE-SCTT---S-H---H-H---HHHHHHHHHHHHHTTCCCCEEEECCEEESSC--
T ss_pred HHHHHHHHHHHHHhc--CCCcEEEecc-cccc---C-c---c-h---HHHHHHHHHHHHHCCCCccEEEeeeeecCCC--
Confidence 1344444444333 2 2235554433 1110 0 0 0 0 11233455545444 34444433321110
Q ss_pred CCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC----CC-CCC---HHHH
Q 018955 216 NRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD----GA-LTN---VDNA 287 (348)
Q Consensus 216 ~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~----~~-vas---~~na 287 (348)
.+ .+.+..+|++++--+++|.|||.++.+.... .. .++ .+.|
T Consensus 231 -------------------------p~-----~~~~~~~l~~~a~~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~Q 280 (356)
T 2dep_A 231 -------------------------PP-----VERIIESIKKFAGLGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQ 280 (356)
T ss_dssp -------------------------SC-----HHHHHHHHHHHHTTTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHH
T ss_pred -------------------------CC-----HHHHHHHHHHHHhCCCeEEEeeceecCCCccccccccCCCCHHHHHHH
Confidence 00 1112222333333467999999999976421 10 022 3457
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcc-EEEEEeec-CCCCCC-CCCCCcee-eecCCCCeeeec
Q 018955 288 RTYNNNLIQHVKRGSPKRPGRPIE-TYIFAMFD-ENGKTG-PEIERHWG-LFAPTRQPRYQI 345 (348)
Q Consensus 288 ~~y~~~~~~~~~~gtp~~~~~~~~-~f~F~~fD-e~wK~~-~~~E~~wG-l~~~d~~~ky~l 345 (348)
+.+++.+++.+.+ ..+ .+. +.+...-| ..|+++ +.-+..++ ||+.|++||...
T Consensus 281 A~~y~~~~~~~~~---~~~--~v~gvt~Wg~~D~~sW~~~~p~g~~~~plLfd~~~~pKpAy 337 (356)
T 2dep_A 281 AKRYQELFDALKE---NKD--IVSAVVFWGISDKYSWLNGFPVKRTNAPLLFDRNFMPKPAF 337 (356)
T ss_dssp HHHHHHHHHHHHT---TGG--GEEEEEESCSBTTSCGGGTSSSSSCCCCSSBCTTSCBCHHH
T ss_pred HHHHHHHHHHHHh---hcC--CeeEEEEecCccCCCcccCCCCCCCCcceeECCCCCCCHHH
Confidence 7888888887751 011 343 33333444 357763 22224554 899999999643
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00017 Score=69.56 Aligned_cols=261 Identities=9% Similarity=0.007 Sum_probs=132.7
Q ss_pred CCeeeEEecCCCCCCCC-HHHHHHHHhhCCCCeEEE-ecC--------------C--hHHHHHHhcCCCEEEE--ecCCC
Q 018955 32 SAQIGVCYGMLGNNLPS-KRDVIALYNQNNIRRMRL-YDP--------------N--REALEALRGSNIEVML--GLPNN 91 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s-~~~v~~ll~~~~~~~VRl-Y~~--------------d--~~vl~A~~~~glkV~l--Gv~~~ 91 (348)
+-.+|.||.+.. ++. .++..++++ .+|+.|+. -.. . ..++.-+++.||+|.. -+|..
T Consensus 36 ~~~~G~a~~~~~--~~~~~~~~~~~~~-~~fn~vt~en~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~ 112 (347)
T 1xyz_A 36 GIKIGTCVNYPF--YNNSDPTYNSILQ-REFSMVVCENEMKFDALQPRQNVFDFSKGDQLLAFAERNGMQMRGHTLIWHN 112 (347)
T ss_dssp TCEEEEEECTHH--HHTCCHHHHHHHH-HHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred CCEEEEEcCHHH--cCcchHHHHHHHH-hcCCEEEECCcccHHHhcCCCCcCChHHHHHHHHHHHHCCCEEEEEeeeccc
Confidence 447999998753 221 133445555 45899988 111 1 3688888999999974 44665
Q ss_pred chhhhhh--------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC------cchHHH--HHHHHHHHHHHHHcCC
Q 018955 92 DLRRIAS--------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD------NFAQYL--VPAMRNIQNAINAAGL 155 (348)
Q Consensus 92 ~~~~~a~--------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~------~~~~~L--l~~i~~v~~~L~~~gl 155 (348)
..+..-. -.+...+++++-+..| + ..|...-|.||++... ....+. -.+|+..-+..+++
T Consensus 113 q~P~W~~~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~-- 188 (347)
T 1xyz_A 113 QNPSWLTNGNWNRDSLLAVMKNHITTVMTHY-K-GKIVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREA-- 188 (347)
T ss_dssp SCCHHHHTSCCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHH--
T ss_pred cCcHHHhcCCCCHHHHHHHHHHHHHHHHHHh-C-CeeEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhh--
Confidence 5444321 1344555666555565 3 4588999999998642 111111 13444433333333
Q ss_pred CCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCccccccccCCce
Q 018955 156 GNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLDYALFRSQQTV 232 (348)
Q Consensus 156 ~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~ 232 (348)
+++.++-.-+ +++. .++ . + ...+..+++.|.+.+ |-+++..|-. ..
T Consensus 189 dP~a~L~~Nd-yn~~---~~~---~-k---~~~~~~~v~~l~~~G~~idgiG~Q~H~~--~~------------------ 237 (347)
T 1xyz_A 189 DPDALLFYND-YNIE---DLG---P-K---SNAVFNMIKSMKERGVPIDGVGFQCHFI--NG------------------ 237 (347)
T ss_dssp CTTSEEEEEE-SSCS---SSS---H-H---HHHHHHHHHHHHHTTCCCCEEEECCEEE--SS------------------
T ss_pred CCCCEEEecc-Cccc---ccc---c-h---HHHHHHHHHHHHHCCCCcceEEEeeecC--CC------------------
Confidence 2335554332 1110 000 0 0 122334554444443 3344332321 00
Q ss_pred eccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccE
Q 018955 233 VSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIET 312 (348)
Q Consensus 233 ~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~ 312 (348)
| . .. .++.+...|+++.-.+++|+|||.|+++........+.+.|..+++.+++.+.+ .|+ -..+
T Consensus 238 -------~-~-~~-~~~~~~~~l~~~a~~G~pi~iTEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~----~~~-v~gi 302 (347)
T 1xyz_A 238 -------M-S-PE-YLASIDQNIKRYAEIGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLA----NPN-CNTF 302 (347)
T ss_dssp -------C-C-HH-HHHHHHHHHHHHHHTTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHH----CTT-EEEE
T ss_pred -------C-C-ch-hHHHHHHHHHHHHhcCCceEEEeccccCCCCCCchhHHHHHHHHHHHHHHHHHh----cCC-eeEE
Confidence 0 0 00 001122222222223579999999998742211001145788888998887752 232 2334
Q ss_pred EEEEeecC-CCCCC-CCCCCceeeecCCCCeeeec
Q 018955 313 YIFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 313 f~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~l 345 (348)
.+..+-|. .|+++ -..+.+-|||+.|++||-..
T Consensus 303 t~Wg~~D~~sW~~~~~~~~~~~llfd~d~~pKpAy 337 (347)
T 1xyz_A 303 VMWGFTDKYTWIPGTFPGYGNPLIYDSNYNPKPAY 337 (347)
T ss_dssp EESCSBTTSCSHHHHSTTEECCSSBCTTSCBCHHH
T ss_pred EEecCccCCccccCcCCCCCCceeECCCCCCCHHH
Confidence 44444443 47642 11244567999999999643
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00092 Score=63.25 Aligned_cols=113 Identities=14% Similarity=0.116 Sum_probs=72.5
Q ss_pred HHHHHHhhCCCCeEEEe-cCC------------------------hHHHHHHhcCCCEEEEecCCCc-----h---hhhh
Q 018955 51 DVIALYNQNNIRRMRLY-DPN------------------------REALEALRGSNIEVMLGLPNND-----L---RRIA 97 (348)
Q Consensus 51 ~v~~ll~~~~~~~VRlY-~~d------------------------~~vl~A~~~~glkV~lGv~~~~-----~---~~~a 97 (348)
+.++++|+.|++.||+. ..+ ..++..|.+.||+|++.+|+.. . ..+-
T Consensus 49 ~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~~~~~~g~~~~~~~~ 128 (353)
T 2c0h_A 49 STLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLM 128 (353)
T ss_dssp HHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEccCccccCCCcccccceE
Confidence 45778899999999996 111 3588889999999999987421 0 0111
Q ss_pred hcHHHHHHHH----HhhccccCCCceEEEEEecccccCC-------------------------C-c-chHHHHHHHHHH
Q 018955 98 SNQAEANTWV----QNNVRNFANNVKFKYIAVGNEAKPG-------------------------D-N-FAQYLVPAMRNI 146 (348)
Q Consensus 98 ~~~~~a~~wv----~~~v~~~~~~~~I~~I~VGNE~l~~-------------------------~-~-~~~~Ll~~i~~v 146 (348)
.+.+...+++ ++-+.+|.....|.+..++||+-.. + . ....+.++++.+
T Consensus 129 ~~~~~~~~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 208 (353)
T 2c0h_A 129 VDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQ 208 (353)
T ss_dssp HCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHHHHHHHHHH
Confidence 2223333333 3444455433468899999998753 0 0 236788888888
Q ss_pred HHHHHHcCCCCceEEeeee
Q 018955 147 QNAINAAGLGNQIKVSTAI 165 (348)
Q Consensus 147 ~~~L~~~gl~~~I~VsT~~ 165 (348)
.+++++..- +.+|++..
T Consensus 209 ~~~Ir~~dp--~~~V~~~~ 225 (353)
T 2c0h_A 209 AAAIKEVDP--GAMVTVGS 225 (353)
T ss_dssp HHHHHHHCT--TCCEEEEE
T ss_pred HHHHHhhCC--CCeEEECC
Confidence 888887643 35666543
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0061 Score=58.84 Aligned_cols=243 Identities=11% Similarity=0.140 Sum_probs=123.7
Q ss_pred HHHHHHHHhhCCCCeEEE---ecC----------C-------hHHHHHHhcCCCEEEEecCCCc-----hhhhhhcHHHH
Q 018955 49 KRDVIALYNQNNIRRMRL---YDP----------N-------REALEALRGSNIEVMLGLPNND-----LRRIASNQAEA 103 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRl---Y~~----------d-------~~vl~A~~~~glkV~lGv~~~~-----~~~~a~~~~~a 103 (348)
-+++++++++.|++.||+ |.. + ..++..+.+.||+|+|-+.... ........+..
T Consensus 64 ~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~~~~~~~~~~~~~~~~~~~ 143 (376)
T 3ayr_A 64 TEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHHETWNHAFSETLDTAKEIL 143 (376)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSCSSCCSCTTTHHHHHHHH
T ss_pred cHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcccccccccchHHHHHHH
Confidence 367788899999999999 321 1 2577888899999999987631 01111111222
Q ss_pred HHHHHhhccccCCC-ceEEEEEecccccCCCc----------chHHHHHHHHHHHHHHHHcCCCC---ceEEeeeeeccc
Q 018955 104 NTWVQNNVRNFANN-VKFKYIAVGNEAKPGDN----------FAQYLVPAMRNIQNAINAAGLGN---QIKVSTAIETGA 169 (348)
Q Consensus 104 ~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~----------~~~~Ll~~i~~v~~~L~~~gl~~---~I~VsT~~~~~~ 169 (348)
.+.. +.|...+.+ ..+..+-+-||+..... ....+.++++.+-+++++.|-.. -|-|... .++
T Consensus 144 ~~~w-~~ia~~~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~~~aIR~~g~~np~~~Iiv~g~-~~~- 220 (376)
T 3ayr_A 144 EKIW-SQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLKTVRSAGGNNPKRHLMIPPY-AAA- 220 (376)
T ss_dssp HHHH-HHHHHHTTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHHHHHHHHHHHTSSTTGGGCCEEECCG-GGB-
T ss_pred HHHH-HHHHHHHcCCCceeeEEeecCCCcCCCccccCCccHHHHHHHHHHHHHHHHHHHHcCCCCCCcEEEECCC-ccC-
Confidence 1111 333333332 34568999999976421 23467788888888888876421 1333321 100
Q ss_pred cccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHH
Q 018955 170 LGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILD 249 (348)
Q Consensus 170 ~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~d 249 (348)
.. + ..+. ....| +......+.+|.|+.|.......-+. ...|. . ...+-++...+
T Consensus 221 --~~--~--~~~~----~~~~p----~~~~n~v~s~H~Y~~~~~~~~~~~~~-~~~~~--------~--~~~~~~~~~~~ 275 (376)
T 3ayr_A 221 --CN--E--NSFN----NFIFP----EDDDKVIASVHAYAPYNFALNNGEGA-VDKFD--------A--AGKRDLEWNIN 275 (376)
T ss_dssp --CS--H--HHHH----TCCCC----TTCTTEEEEEECCCSHHHHTCCSTTC-CSSCC--------H--HHHHHHHHHHH
T ss_pred --cc--c--cccc----cccCC----CCCCCEEEEEeecCchhccccCCCCc-ccccC--------h--hhhhHHHHHHH
Confidence 00 0 0000 00001 00123367778887665432100000 00000 0 00111222233
Q ss_pred HHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCC
Q 018955 250 AVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIE 329 (348)
Q Consensus 250 a~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E 329 (348)
.+...+.+ .++||+|||.|.... .+.+....|.+.+++.++ + .++..++-+ +. +|.. .+
T Consensus 276 ~~~~~~~~---~g~Pv~igEfG~~~~------~~~~~~~~w~~~~~~~~~-----~--~~ig~~~W~-~g-~~~g---~~ 334 (376)
T 3ayr_A 276 LMKKRFVD---QGIPMILGEYGAMNR------DNEEDRATWAEFYMEKVT-----A--MGVPQIWWD-NG-VFEG---TG 334 (376)
T ss_dssp HHHHHTGG---GTCCEEEEEECCCCS------SCHHHHHHHHHHHHHHHH-----T--TTCCEEEEE-CS-CCSS---SS
T ss_pred HHHHHHHH---cCCcEEEEccccCCC------CCcHHHHHHHHHHHHHHH-----H--CCCcEEEEC-CC-CCCC---CC
Confidence 33222222 367999999998864 334556677888887775 1 256554333 43 2332 13
Q ss_pred CceeeecCCCC
Q 018955 330 RHWGLFAPTRQ 340 (348)
Q Consensus 330 ~~wGl~~~d~~ 340 (348)
-.|||++.+..
T Consensus 335 ~~~g~~d~~~~ 345 (376)
T 3ayr_A 335 ERFGLLDRKNL 345 (376)
T ss_dssp CCCCCEETTTT
T ss_pred ccceeEeCCCC
Confidence 45899987643
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00042 Score=67.19 Aligned_cols=256 Identities=13% Similarity=0.052 Sum_probs=135.1
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEE-ecC--------------C--hHHHHHHhcCCCEEEEe--cCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRL-YDP--------------N--REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRl-Y~~--------------d--~~vl~A~~~~glkV~lG--v~~~ 91 (348)
..-.+|.||.+.. ++. +..+++++ +|+.|++ -.. + ..++.-+++.||+|..+ ||..
T Consensus 17 ~~f~~G~a~~~~~--~~~--~~~~l~~~-~fn~vt~en~~kW~~~ep~~G~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~ 91 (356)
T 2uwf_A 17 EQFDIGAAVEPYQ--LEG--RQAQILKH-HYNSLVAENAMKPVSLQPREGEWNWEGADKIVEFARKHNMELRFHTLVWHS 91 (356)
T ss_dssp TTCEEEEEECGGG--SSH--HHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEECCSEESS
T ss_pred hcCeEEEEechhh--cCH--HHHHHHHh-cCCEEEECCcccHHHhcCCCCccCchHHHHHHHHHHHCCCEEEEeeccccc
Confidence 3457899998764 443 67777754 5999998 211 1 36888889999999876 4554
Q ss_pred chhhhhh-----------------------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cchHHHH--H
Q 018955 92 DLRRIAS-----------------------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NFAQYLV--P 141 (348)
Q Consensus 92 ~~~~~a~-----------------------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~~~~Ll--~ 141 (348)
..+.... -.+.+.++|++-+..| + ..|...-|.||.+..+ ....+.+ .
T Consensus 92 q~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY-~-g~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~ 169 (356)
T 2uwf_A 92 QVPEWFFIDENGNRMVDETDPEKRKANKQLLLERMENHIKTVVERY-K-DDVTSWDVVNEVIDDDGGLRESEWYQITGTD 169 (356)
T ss_dssp SCCGGGGBCTTSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TTCSEEEEEESCBCTTSSBCCCHHHHHHTTH
T ss_pred cCchhHhcCCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHHc-C-CcceEEEeecccccCCCCcccchHHhhccHH
Confidence 4433221 1234566666656566 3 4899999999999742 1111111 2
Q ss_pred HHHHHHHHHHH-cCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCC
Q 018955 142 AMRNIQNAINA-AGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNR 217 (348)
Q Consensus 142 ~i~~v~~~L~~-~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~ 217 (348)
+|...-+.-++ +. ++.++-.-+ +++. . | + + ...+..+++.|.+.+ |-+++..|....+.
T Consensus 170 ~i~~af~~Ar~~~d--P~a~L~~Nd-yn~~-~---~--~--k---~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p--- 232 (356)
T 2uwf_A 170 YIKVAFETARKYGG--EEAKLYIND-YNTE-V---P--S--K---RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWP--- 232 (356)
T ss_dssp HHHHHHHHHHHHHC--TTCCEEEEE-SCTT-S---H--H--H---HHHHHHHHHHHHHTTCCCCEEEECCEEESSCS---
T ss_pred HHHHHHHHHHhhCC--CCCEEEecc-cccc-c---c--c--h---hHHHHHHHHHHHHCCCcccEEEEEEecCCCCC---
Confidence 33333333333 21 223443322 1100 0 0 0 0 112334555555544 44554444311100
Q ss_pred CCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC---------C-CCCCHHHH
Q 018955 218 QISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD---------G-ALTNVDNA 287 (348)
Q Consensus 218 ~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~---------~-~vas~~na 287 (348)
+ .+.+..+|++++--+++|.|||.++.+.... . ...+.+.|
T Consensus 233 ------------------------~-----~~~~~~~l~~~a~~Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~Q 283 (356)
T 2uwf_A 233 ------------------------S-----IEDTRASFEKFTSLGLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQ 283 (356)
T ss_dssp ------------------------C-----HHHHHHHHHHHHTTTCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHH
T ss_pred ------------------------C-----HHHHHHHHHHHHhcCCcEEEEeccccCCCCccccccccccCCChHHHHHH
Confidence 0 1112233333333467999999999875421 1 00124567
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccEEEE-EeecC-CCCCC-----C--CCCCceeeecCCCCeeee
Q 018955 288 RTYNNNLIQHVKRGSPKRPGRPIETYIF-AMFDE-NGKTG-----P--EIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 288 ~~y~~~~~~~~~~gtp~~~~~~~~~f~F-~~fDe-~wK~~-----~--~~E~~wGl~~~d~~~ky~ 344 (348)
+.+++.++..+.+ ..+ .+.-+.+ .+-|. .|+++ + +-+.+=|||+.|.+||..
T Consensus 284 A~~y~~~~~~~~~---~~~--~v~git~WG~~D~~sW~~~~~~~~p~~g~~~~plLfd~~~~pKpA 344 (356)
T 2uwf_A 284 ADRYDQLFELYEE---LSA--TISSVTFWGIADNHTWLDDRAREYNNGVGVDAPFVFDHNYRVKPA 344 (356)
T ss_dssp HHHHHHHHHHHHH---TGG--GEEEEEESSSSTTSCHHHHHHHHHTTTCCCCCCSSBCTTSBBCHH
T ss_pred HHHHHHHHHHHHh---ccC--CEEEEEEECCCCCCccccCccccCCCCCCCCCCeeECCCCCCCHH
Confidence 7888888887742 011 3333333 34443 46532 1 123445999999999964
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0014 Score=62.38 Aligned_cols=241 Identities=9% Similarity=0.003 Sum_probs=129.9
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe---------------cCC--hHHHHHHhcCCCEEEEe--cCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY---------------DPN--REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY---------------~~d--~~vl~A~~~~glkV~lG--v~~~ 91 (348)
.+-.+|.+|.+.. ++. ++..+++++ +|+.|+.= +-. ..++.-+++.||+|... +|..
T Consensus 12 ~g~~~G~a~~~~~--~~~-~~~~~~~~~-~fn~vt~eN~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~ 87 (313)
T 1v0l_A 12 SGRYFGTAIASGR--LSD-STYTSIAGR-EFNMVTAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHTLAWHS 87 (313)
T ss_dssp TTCEEEEEECGGG--TTC-HHHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred cCCEEEEEeChhh--cCC-HHHHHHHHh-cCCEEEECCcccHHHhCCCCCccCchHHHHHHHHHHHCCCEEEEEeecCcC
Confidence 4567899998754 332 445556654 58999872 111 36788888999998533 5776
Q ss_pred chhhhhh------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC------cc------hHHHHHHHHHHHHHHHHc
Q 018955 92 DLRRIAS------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD------NF------AQYLVPAMRNIQNAINAA 153 (348)
Q Consensus 92 ~~~~~a~------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~------~~------~~~Ll~~i~~v~~~L~~~ 153 (348)
..+.... -.+...+++++-+..| + .+|...-|.||.+..+ .. .+.+..+.+.+|++
T Consensus 88 q~P~W~~~~~~~~~~~~~~~~i~~v~~ry-~-g~i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~~---- 161 (313)
T 1v0l_A 88 QQPGWMQSLSGSALRQAMIDHINGVMAHY-K-GKIVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAA---- 161 (313)
T ss_dssp SCCHHHHTCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHH----
T ss_pred cCchhhhcCCHHHHHHHHHHHHHHHHHHc-C-CcceEEeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHhh----
Confidence 5554321 1345556666555565 3 4688999999999632 11 23334444444443
Q ss_pred CCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCccccccccCC
Q 018955 154 GLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLDYALFRSQQ 230 (348)
Q Consensus 154 gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~~a~f~~~~ 230 (348)
+++.++-.-+ +++... ++ .- ...+..+++.|.+.+ |-+++..|-.-...
T Consensus 162 --dP~a~L~~Nd-yn~~~~--~~---~k----~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~---------------- 213 (313)
T 1v0l_A 162 --DPSAKLCYND-YNVENW--TW---AK----TQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSP---------------- 213 (313)
T ss_dssp --CTTSEEEEEE-SSCCST--TS---HH----HHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC----------------
T ss_pred --CCCCEEEEec-cccccC--Ch---HH----HHHHHHHHHHHHHCCCCcceEEEeEEccCCCC----------------
Confidence 2345555433 111110 00 00 112234454444443 55555444211100
Q ss_pred ceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 018955 231 TVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPI 310 (348)
Q Consensus 231 ~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~ 310 (348)
.. .-+.+.++.+ .. -+++|+|||.+++. .|..+++.+++.+. ..|+ -.
T Consensus 214 ----~~-----~~~~~~l~~~----a~---~G~pv~iTEldi~~-----------~qa~~y~~~~~~~~----~~~~-v~ 261 (313)
T 1v0l_A 214 ----YN-----SNFRTTLQNF----AA---LGVDVAITELDIQG-----------APASTYANVTNDCL----AVSR-CL 261 (313)
T ss_dssp ----CC-----TTHHHHHHHH----HT---TTCEEEEEEEEETT-----------CCHHHHHHHHHHHH----TCTT-EE
T ss_pred ----CH-----HHHHHHHHHH----Hh---cCCeEEEEeCCccH-----------HHHHHHHHHHHHHH----hcCC-ce
Confidence 00 1122233332 23 35799999999981 14456777777664 1232 23
Q ss_pred cEEEEEeecC-CCCCCCCCCCceeeecCCCCeeeec
Q 018955 311 ETYIFAMFDE-NGKTGPEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 311 ~~f~F~~fDe-~wK~~~~~E~~wGl~~~d~~~ky~l 345 (348)
.+.+..+-|. .|+++ .+-|||+.|++||...
T Consensus 262 git~Wg~~D~~sW~~~----~~~~L~d~d~~pKpAy 293 (313)
T 1v0l_A 262 GITVWGVRDSDSWRSE----QTPLLFNNDGSKKAAY 293 (313)
T ss_dssp EEEESCSBGGGSTTGG----GCCSSBCTTSCBCHHH
T ss_pred EEEEECCCCCCCccCC----CCceeECCCCCCCHHH
Confidence 4555555554 47753 2349999999999653
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00087 Score=65.49 Aligned_cols=95 Identities=12% Similarity=0.175 Sum_probs=63.5
Q ss_pred CCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe---cC------------C--hHHHHHHhcCCCEEEEe--cCCCc
Q 018955 32 SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY---DP------------N--REALEALRGSNIEVMLG--LPNND 92 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY---~~------------d--~~vl~A~~~~glkV~lG--v~~~~ 92 (348)
.-.+|.||.+.. ++. ++..+++++ +|+.|++= .. + ..++.-+++.||+|..+ ||...
T Consensus 27 ~f~~G~a~~~~~--~~~-~~~~~l~~~-~fn~vt~eNe~kW~~~ep~~G~~~f~~~D~~v~~a~~~gi~vrghtlvW~~q 102 (379)
T 1r85_A 27 EFTIGAAVEPYQ--LQN-EKDVQMLKR-HFNSIVAENVMKPISIQPEEGKFNFEQADRIVKFAKANGMDIRFHTLVWHSQ 102 (379)
T ss_dssp TCEEEEEECGGG--GGC-HHHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEECSCCSTT
T ss_pred cCEEEEEcChhh--cCC-HHHHHHHHh-hCCeEEECCcccHHHhcCCCCccCchhHHHHHHHHHHCCCEEEEeccccccc
Confidence 457899998764 333 366777754 59999982 11 1 36888889999999877 45554
Q ss_pred hhhhhh-----------------------cHHHHHHHHHhhccccCCCceEEEEEecccccCC
Q 018955 93 LRRIAS-----------------------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 132 (348)
Q Consensus 93 ~~~~a~-----------------------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~ 132 (348)
.+.... -.+.+.++|++-+..| + ..|...-|.||.+..
T Consensus 103 ~P~W~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY-~-g~i~~wdV~NE~~~~ 163 (379)
T 1r85_A 103 VPQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERY-K-DDIKYWDVVNEVVGD 163 (379)
T ss_dssp CCGGGGBCTTSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TTCCEEEEEESCBCT
T ss_pred CchhhhcCcCCccccccccccccCCCHHHHHHHHHHHHHHHHHHh-C-CCceEEEeecccccC
Confidence 443221 1234556666656666 3 389999999999974
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0021 Score=63.63 Aligned_cols=240 Identities=9% Similarity=-0.010 Sum_probs=131.2
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe-cC--------------C--hHHHHHHhcCCCEEEEe--cCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY-DP--------------N--REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY-~~--------------d--~~vl~A~~~~glkV~lG--v~~~ 91 (348)
.+-.+|.+|.+.. ++. ++..+++++ +|+.|++= .. . ..++.-+++.||+|... +|..
T Consensus 12 ~~~~~G~a~~~~~--~~~-~~~~~~~~~-~fn~~t~en~~kw~~~ep~~g~~~f~~~D~~~~~a~~~gi~v~ghtlvW~~ 87 (436)
T 2d1z_A 12 SGRYFGTAIASGK--LGD-SAYTTIASR-EFNMVTAENEMKIDATEPQRGQFNFSAGDRVYNWAVQNGKQVRGHTLAWHS 87 (436)
T ss_dssp TTCEEEEEECGGG--TTC-HHHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEECST
T ss_pred cCCEEEEEeChhh--cCC-HHHHHHHHH-hCCeeeeccccccccccCCCCccChHHHHHHHHHHHHCCCEEEEEEEEeCC
Confidence 4567899998754 332 445556654 58999872 11 1 35788888999998543 5765
Q ss_pred chhhhhh------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC------c-----c-hHHHHHHHHHHHHHHHHc
Q 018955 92 DLRRIAS------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD------N-----F-AQYLVPAMRNIQNAINAA 153 (348)
Q Consensus 92 ~~~~~a~------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~------~-----~-~~~Ll~~i~~v~~~L~~~ 153 (348)
..+.... -.+...+++++-+..| + ..|...-|+||++..+ . . .+.+..+.+.+|++
T Consensus 88 q~P~W~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af~~Ar~~---- 161 (436)
T 2d1z_A 88 QQPGWMQSLSGSTLRQAMIDHINGVMGHY-K-GKIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAA---- 161 (436)
T ss_dssp TCCHHHHTCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHHHHHHHH----
T ss_pred CCchhhhcCCHHHHHHHHHHHHHHHHHhc-C-CceEEEEeecccccCCCCccccCchhhhcchHHHHHHHHHHHhh----
Confidence 5554321 1344555666555565 4 4788889999998532 1 1 23444444555543
Q ss_pred CCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCccccccccCC
Q 018955 154 GLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISLDYALFRSQQ 230 (348)
Q Consensus 154 gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~ 230 (348)
+++.++-.-+ +++... ++ .- ...+..+++.|.+. .|-+++..|.......
T Consensus 162 --dP~a~l~~Nd-yn~~~~--~~---~k----~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~--------------- 214 (436)
T 2d1z_A 162 --DPAAKLCYND-YNIENW--TW---AK----TQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPY--------------- 214 (436)
T ss_dssp --CTTSEEEEEE-SSCCST--TS---HH----HHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCC---------------
T ss_pred --CCCCEEEEec-cccccC--Ch---hH----HHHHHHHHHHHHhCCCcccEEEEeeEEcCCCCC---------------
Confidence 2345654432 111110 00 00 11223445445444 5777877776432110
Q ss_pred ceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 018955 231 TVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPI 310 (348)
Q Consensus 231 ~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~ 310 (348)
. .-+.+.++.+ .. -++||+|||.+++. .|+.+++.+++.+.+ .|. -.
T Consensus 215 --~--------~~~~~~l~~~----a~---~g~~v~iTEldv~~-----------~qa~~y~~~~~~~~~----~~~-~~ 261 (436)
T 2d1z_A 215 --N--------SNFRTTLQNF----AA---LGVDVAITELDIQG-----------ASSSTYAAVTNDCLA----VSR-CL 261 (436)
T ss_dssp --C--------TTHHHHHHHH----HT---TTCEEEEEEEEETT-----------CCHHHHHHHHHHHHT----CTT-EE
T ss_pred --H--------HHHHHHHHHH----HH---cCCeEEEeecchhH-----------HHHHHHHHHHHHHHh----cCC-ce
Confidence 0 1122233322 23 35799999999981 134566777776641 232 23
Q ss_pred cEEEEEeecC-CCCCCCCCCCceeeecCCCCeeee
Q 018955 311 ETYIFAMFDE-NGKTGPEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 311 ~~f~F~~fDe-~wK~~~~~E~~wGl~~~d~~~ky~ 344 (348)
.+++..+-|. .|+++ .+-+||+.|+++|-.
T Consensus 262 gvt~Wg~~d~~sW~~~----~~~~L~d~~g~~kpa 292 (436)
T 2d1z_A 262 GITVWGVRDTDSWRSG----DTPLLFNGDGSKKAA 292 (436)
T ss_dssp EEEESCSBGGGCTTGG----GCCSSBCTTSCBCHH
T ss_pred EEEeccccCCcccccc----ccccccccCCCcchH
Confidence 4555555553 46653 234899999998853
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.023 Score=53.04 Aligned_cols=111 Identities=16% Similarity=0.157 Sum_probs=71.5
Q ss_pred HHHHHHHhhCCCCeEEEec------C-------C-------hHHHHHHhcCCCEEEEecCCCch--hhhhhcHHHHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYD------P-------N-------REALEALRGSNIEVMLGLPNNDL--RRIASNQAEANTWV 107 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~------~-------d-------~~vl~A~~~~glkV~lGv~~~~~--~~~a~~~~~a~~wv 107 (348)
+++++.+++.|++.||+-= . + ..++..+.+.||+|+|.+..... .....+.+...+..
T Consensus 34 ~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~~g~~~~~~~~~~~~~ 113 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYNSIISSPSDFETFW 113 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETTEECCCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccccccCCcCCcHHHHHHHH
Confidence 5677888999999999841 1 1 24788888999999999876421 00001233333322
Q ss_pred HhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCC-CCceEEee
Q 018955 108 QNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGL-GNQIKVST 163 (348)
Q Consensus 108 ~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl-~~~I~VsT 163 (348)
+.-...|.....| ..-+-||+... ....+.++++.+-+++++.+- ..-|-|..
T Consensus 114 ~~ia~~~~~~~~V-~~~l~NEP~~~--~~~~w~~~~~~~~~~IR~~~~~~~~I~v~g 167 (305)
T 1h1n_A 114 KTVASQFASNPLV-IFDTDNEYHDM--DQTLVLNLNQAAIDGIRSAGATSQYIFVEG 167 (305)
T ss_dssp HHHHHTSTTCTTE-EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEEC
T ss_pred HHHHHHhCCCCeE-EEeccCCCCCC--CHHHHHHHHHHHHHHHHhcCCCccEEEEcc
Confidence 2223333223478 99999999653 467788888998889988876 43344443
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0012 Score=62.47 Aligned_cols=242 Identities=14% Similarity=0.042 Sum_probs=129.1
Q ss_pred CeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEE-ecC--------------C--hHHHHHHhcCCCEEEEe--cCCCch
Q 018955 33 AQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRL-YDP--------------N--REALEALRGSNIEVMLG--LPNNDL 93 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRl-Y~~--------------d--~~vl~A~~~~glkV~lG--v~~~~~ 93 (348)
-.+|.||.+.. ++. +...+++++ +|+.|+. -.. + ..++.-+++.||+|... +|....
T Consensus 15 ~~~G~a~~~~~--~~~-~~~~~~~~~-~fn~vt~en~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~ 90 (303)
T 1ta3_B 15 SYFGTCSDQAL--LQN-SQNEAIVAS-QFGVITPENSMKWDALEPSQGNFGWSGADYLVDYATQHNKKVRGHTLVWHSQL 90 (303)
T ss_dssp SEEEEEECHHH--HHS-HHHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEECSSSC
T ss_pred CEEEEEcChhh--cCC-HHHHHHHHh-hCCEEEECccccHHHhCCCCCccCchHHHHHHHHHHHCCCEEEEeeccccCCC
Confidence 47899998653 222 235666754 5899998 211 1 36888888999998755 576655
Q ss_pred hhhhh---c----HHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cchHHH--HHHHHHHHHHHHHcCCCCce
Q 018955 94 RRIAS---N----QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NFAQYL--VPAMRNIQNAINAAGLGNQI 159 (348)
Q Consensus 94 ~~~a~---~----~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~~~~L--l~~i~~v~~~L~~~gl~~~I 159 (348)
+.... + .+...+++++-+..| + .+|...-|.||++..+ ...... -.+|+..-+..+++. ++.
T Consensus 91 P~W~~~~~~~~~~~~~~~~~i~~v~~rY-~-g~v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~d--P~a 166 (303)
T 1ta3_B 91 PSWVSSIGDANTLRSVMTNHINEVVGRY-K-GKIMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAAD--PDA 166 (303)
T ss_dssp CHHHHTCCCHHHHHHHHHHHHHHHHHHT-T-TSCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHC--TTS
T ss_pred ChhhhcCCCHHHHHHHHHHHHHHHHHhc-C-CcceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHHHC--CCC
Confidence 54221 1 244556666555565 4 4688999999998642 111111 134444444444432 345
Q ss_pred EEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCccccccccCCceeccC
Q 018955 160 KVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDG 236 (348)
Q Consensus 160 ~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~ 236 (348)
++-.-+ +++. . |... -...+..+++.|.+.+ |-+++..|..-... + .
T Consensus 167 ~L~~Nd-yn~~---~-~~~~-----k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~-----~------------~--- 216 (303)
T 1ta3_B 167 KLYIND-YNLD---S-ASYA-----KTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHW-----S------------S--- 216 (303)
T ss_dssp EEEEEE-SCCC---C-TTSH-----HHHHHHHHHHHHHHTTCCCCEEEECCEECTTCC-----C------------G---
T ss_pred EEEecc-cccc---C-CchH-----HHHHHHHHHHHHHHCCCCcceEEEeeecCCCCC-----C------------H---
Confidence 665543 1111 0 1000 0112334555454443 56665555321110 0 0
Q ss_pred CcchhhHHHHHHHHHHHHHHHhCCCCc-cEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEE
Q 018955 237 SLSYRSLFDAILDAVYAALEKTGGGSL-GIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIF 315 (348)
Q Consensus 237 ~~~y~n~~da~~da~~~a~~~~g~~~~-~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F 315 (348)
..+.+.++.+ .. -++ ||+|||.+++.. |..+++.+++.+.+ .|. -..+.+.
T Consensus 217 -----~~~~~~l~~~----a~---~G~~pi~iTEldi~~~-----------qa~~y~~~~~~~~~----~~~-v~git~W 268 (303)
T 1ta3_B 217 -----TEAAGALSSL----AN---TGVSEVAITELDIAGA-----------ASSDYLNLLNACLN----EQK-CVGITVW 268 (303)
T ss_dssp -----GGHHHHHHHH----HT---TCCSEEEEEEEEETTC-----------CHHHHHHHHHHHHT----CTT-EEEEEES
T ss_pred -----HHHHHHHHHH----HH---CCCCeEEEeeCCcChh-----------HHHHHHHHHHHHHh----CCC-ceEEEEe
Confidence 1122233322 33 356 999999999821 23445666666541 232 2345455
Q ss_pred EeecC-CCCCCCCCCCceeeecCCCCeeee
Q 018955 316 AMFDE-NGKTGPEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 316 ~~fDe-~wK~~~~~E~~wGl~~~d~~~ky~ 344 (348)
.+-|. .|++. .+.|||+.|++||..
T Consensus 269 g~~D~~sW~~~----~~~~l~d~~~~pKpA 294 (303)
T 1ta3_B 269 GVSDKDSWRAS----DSPLLFDGNYQPKDA 294 (303)
T ss_dssp CSBGGGSTTGG----GCCSSBCTTSCBCHH
T ss_pred cCCcCCCccCC----CcceeECCCCCCCHH
Confidence 55553 57652 357999999999964
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.013 Score=58.51 Aligned_cols=131 Identities=15% Similarity=0.011 Sum_probs=80.2
Q ss_pred eeeEEecCCCC--------CCCCHHHHHHHHhhCCCCeEEEe-c----------------CCh------------HHHHH
Q 018955 34 QIGVCYGMLGN--------NLPSKRDVIALYNQNNIRRMRLY-D----------------PNR------------EALEA 76 (348)
Q Consensus 34 ~~Gi~Y~~~~~--------~~~s~~~v~~ll~~~~~~~VRlY-~----------------~d~------------~vl~A 76 (348)
..|||+..... ...+.+++++.+++.|++.||+= + .++ .++..
T Consensus 63 l~GVN~~G~e~~~~~~~Gl~~~~~~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~ 142 (458)
T 3qho_A 63 LFGVNWFGFETPNHVVHGLWKRNWEDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKK 142 (458)
T ss_dssp CEEEECCCTTSTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHH
T ss_pred EEEEecCcccccccccCCCCCCCHHHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHH
Confidence 56888743311 11345788899999999999992 1 111 37888
Q ss_pred HhcCCCEEEEecCCCch----hhh---hhcHHHHHHHHHhhccccCCCceEEEEEecccccCC---------------C-
Q 018955 77 LRGSNIEVMLGLPNNDL----RRI---ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG---------------D- 133 (348)
Q Consensus 77 ~~~~glkV~lGv~~~~~----~~~---a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~---------------~- 133 (348)
+.+.||+|+|-+.+... +.+ ....+...+..+.-..+|.....|.++-+.||+... +
T Consensus 143 a~~~Gi~VIldlH~~~~~~~~~~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~ 222 (458)
T 3qho_A 143 AGDLGIFVLLDYHRIGCTHIEPLWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGM 222 (458)
T ss_dssp HHHTTCEEEEEEEESSSSSCCSSSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSS
T ss_pred HHHCCCEEEEecccCCCccCCCccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCC
Confidence 89999999998875321 000 011233333223333344334578899999999852 0
Q ss_pred -cchHHHHHHHHHHHHHHHHcCCCCceEEeee
Q 018955 134 -NFAQYLVPAMRNIQNAINAAGLGNQIKVSTA 164 (348)
Q Consensus 134 -~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~ 164 (348)
.....+.++++.+-+++++.+-..-|-|+..
T Consensus 223 ~~~~~~w~~~~~~ai~aIRa~dp~~lIiv~G~ 254 (458)
T 3qho_A 223 GNPATDWNLAAERIGKAILKVAPHWLIFVEGT 254 (458)
T ss_dssp SCTTTBHHHHHHHHHHHHHHHCTTCEEEECCB
T ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCEEEEcCC
Confidence 1235677788888888888875443444443
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0052 Score=62.44 Aligned_cols=262 Identities=10% Similarity=0.002 Sum_probs=140.6
Q ss_pred CCeeeEEecCCCC----CCCCHHHHHHHHhhCCCCeEEEe---cC------------C--hHHHHHHhcCCCEEEEe--c
Q 018955 32 SAQIGVCYGMLGN----NLPSKRDVIALYNQNNIRRMRLY---DP------------N--REALEALRGSNIEVMLG--L 88 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~----~~~s~~~v~~ll~~~~~~~VRlY---~~------------d--~~vl~A~~~~glkV~lG--v 88 (348)
.-.+|.||.+..- .+..+ +..+++++ +|+.|++= .. + ..++.-+++.||+|... +
T Consensus 174 ~f~~G~a~~~~~w~~~~~l~~~-~~~~l~~~-~FN~vT~eNemKW~~iEP~~G~~~f~~~D~ivd~a~~nGi~VrgHtLv 251 (530)
T 1us2_A 174 DFPIGVAVSNTDSATYNLLTNS-REQAVVKK-HFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWATENNMTVHGHALV 251 (530)
T ss_dssp SCCEEEEEBCTTCTTTBTTTCH-HHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeccccccchhhcCCH-HHHHHHHh-hCCeEEECCcccHHHhcCCCCccCchHHHHHHHHHHHCCCEEEEeccc
Confidence 4578999998732 23322 56677754 58999882 11 1 36888889999999877 5
Q ss_pred CCC--chhhhhh----c----HHHHHHHHHhhccccCCCceEEEEEecccccCCC--------c-chHHHH----HHHHH
Q 018955 89 PNN--DLRRIAS----N----QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD--------N-FAQYLV----PAMRN 145 (348)
Q Consensus 89 ~~~--~~~~~a~----~----~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~--------~-~~~~Ll----~~i~~ 145 (348)
|.. ..+.... + .+.+.++|++-+..|.....|..--|.||.+..+ . ...+.+ .+|+.
T Consensus 252 Whs~~q~P~Wv~~~~Gs~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~i~~ 331 (530)
T 1us2_A 252 WHSDYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIER 331 (530)
T ss_dssp CCCGGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHHHHH
T ss_pred ccccccCchHHhcCCCCHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHHHHH
Confidence 766 4444322 1 3445666666666663114799999999988632 1 111122 44444
Q ss_pred HHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCcc
Q 018955 146 IQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLD 222 (348)
Q Consensus 146 v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~ 222 (348)
.-+..+++. ++.++-.-+ +++... |. -...+..+++.|.+.+ |-+++..|-...+
T Consensus 332 AF~~Ar~aD--P~AkL~~ND-Yn~~~~---~~-------k~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~--------- 389 (530)
T 1us2_A 332 AFQTARAAD--PAVILYYND-YNIEQN---NA-------KTTKMVDMVKDFQARSIPIDGVGFQMHVCMNY--------- 389 (530)
T ss_dssp HHHHHHHHC--TTSEEEEEE-SSTTSC---SH-------HHHHHHHHHHHHHHTTCCCCEEEECCEEESSC---------
T ss_pred HHHHHHHHC--CCCEEEecc-cccccc---cc-------hhHHHHHHHHHHHHCCCceeEEEEeeecCCCC---------
Confidence 444444432 235554332 111110 10 0112334555554443 5555544431110
Q ss_pred ccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC-------CCC-CCC---HHHHHHHH
Q 018955 223 YALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG-------DGA-LTN---VDNARTYN 291 (348)
Q Consensus 223 ~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~-------~~~-vas---~~na~~y~ 291 (348)
+ + .+.+..+|+++.--++||.|||-++++... +.. ..+ .+.|+.++
T Consensus 390 ------p------------~-----~~~i~~~L~~~a~lGlpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y 446 (530)
T 1us2_A 390 ------P------------S-----IANISAAMKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRY 446 (530)
T ss_dssp ------S------------C-----HHHHHHHHHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHH
T ss_pred ------C------------C-----HHHHHHHHHHHHhcCCeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHH
Confidence 0 0 112233334444356899999999987641 110 022 45678888
Q ss_pred HHHHHHH--HhcCCCCCCCCccEEEEE-eecC-CCCCC-C------CCCCceeeecCCCCeeeec
Q 018955 292 NNLIQHV--KRGSPKRPGRPIETYIFA-MFDE-NGKTG-P------EIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 292 ~~~~~~~--~~gtp~~~~~~~~~f~F~-~fDe-~wK~~-~------~~E~~wGl~~~d~~~ky~l 345 (348)
+.+++.+ .+- .| .+.-+.+. +-|. .|+++ + +.+.+-+||+.|++||...
T Consensus 447 ~~~~~~~l~~~~---~~--~v~GIT~WG~~D~~SW~~~~P~~~~~~g~~~~plLfD~d~~pKPAy 506 (530)
T 1us2_A 447 CDVVKAYLDTVP---VN--QRGGISVWGTTDANTWLDGLYREQFEDEKISWPLLFDNNYNDKPAL 506 (530)
T ss_dssp HHHHHHHHHHSC---GG--GEEEEEESCSBGGGCHHHHHTTTTTTTCCCCCCSSBCTTSCBCHHH
T ss_pred HHHHHHHhhhcc---CC--ceEEEEEEcCcCCCccCCCCCcccccccCCCCceeECCCCCCCHHH
Confidence 8888877 210 11 33333444 4443 57642 1 2356678999999999643
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0028 Score=59.81 Aligned_cols=94 Identities=13% Similarity=0.047 Sum_probs=60.1
Q ss_pred CeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEE-ecC--------------C--hHHHHHHhcCCCEEEEe--cCCCch
Q 018955 33 AQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRL-YDP--------------N--REALEALRGSNIEVMLG--LPNNDL 93 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRl-Y~~--------------d--~~vl~A~~~~glkV~lG--v~~~~~ 93 (348)
-.+|.+|.+.. ++. +...+++++ +|+.|+. ... + ..++..+++.||+|... +|.+..
T Consensus 16 ~~~G~a~~~~~--~~~-~~~~~~~~~-~fn~vt~en~~kW~~~ep~~g~~~f~~~D~~v~~a~~~gi~v~ghtl~W~~q~ 91 (303)
T 1i1w_A 16 VYFGVATDQNR--LTT-GKNAAIIQA-NFGQVTPENSMKWDATEPSQGNFNFAGADYLVNWAQQNGKLIRGHTLVWHSQL 91 (303)
T ss_dssp SEEEEEECHHH--HTS-TTHHHHHHH-HCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEEECSTTC
T ss_pred CEEEEEcChhh--cCC-HHHHHHHHh-hCCEEEECccccHHHhCCCCCccChhhHHHHHHHHHHCCCEEEEeeccccCCC
Confidence 47899998754 221 135566654 5899988 221 1 36888888999998654 576655
Q ss_pred hhhhh---c----HHHHHHHHHhhccccCCCceEEEEEecccccCC
Q 018955 94 RRIAS---N----QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 132 (348)
Q Consensus 94 ~~~a~---~----~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~ 132 (348)
+.... + .+...+++++-+..| + .+|...-|.||++..
T Consensus 92 P~W~~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~WdV~NE~~~~ 135 (303)
T 1i1w_A 92 PSWVSSITDKNTLTNVMKNHITTLMTRY-K-GKIRAWDVVNEAFNE 135 (303)
T ss_dssp CHHHHTCCCHHHHHHHHHHHHHHHHHHT-T-TSCSEEEEEESCBCT
T ss_pred ChHHhcCCCHHHHHHHHHHHHHHHHHhc-C-CceeEEEeecCccCC
Confidence 54321 1 234555666555565 4 469999999999864
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=97.14 E-value=0.012 Score=58.86 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=50.8
Q ss_pred HHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhhhh------hcHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRRIA------SNQAEAN 104 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~a------~~~~~a~ 104 (348)
++++++++..|++.+|+=-. + .+++..+.+.||++++.+..-+++... .+++.+.
T Consensus 84 ~eDi~lm~~~G~~~~R~si~W~Ri~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~~ggw~~~~~~~ 163 (468)
T 2j78_A 84 KEDIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLKGGWANREIAD 163 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSTTHHH
T ss_pred HHHHHHHHHcCCCEEEeccCHHHhCCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccCCCCchhhhhcCCCCChHHHH
Confidence 67889999999999998621 2 258889999999999999765443211 0111111
Q ss_pred HH--HHhhccccCCCceEEEEEeccccc
Q 018955 105 TW--VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 105 ~w--v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
.+ ..+.+...+. +.|+.-..=||+.
T Consensus 164 ~F~~ya~~~~~~~g-d~V~~W~t~NEp~ 190 (468)
T 2j78_A 164 WFAEYSRVLFENFG-DRVKNWITLNEPW 190 (468)
T ss_dssp HHHHHHHHHHHHHT-TTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHhC-CccceEEEccccc
Confidence 11 1122222233 4788888889974
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0081 Score=59.45 Aligned_cols=79 Identities=20% Similarity=0.140 Sum_probs=52.4
Q ss_pred HHHHHHHHhhCCCCeEEEecC-----------C-------hHHHHHHhcCCCEEEEecCCCchhhhhh------c---HH
Q 018955 49 KRDVIALYNQNNIRRMRLYDP-----------N-------REALEALRGSNIEVMLGLPNNDLRRIAS------N---QA 101 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~~-----------d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~------~---~~ 101 (348)
-++++++++..|++.+|+=-. + .+++..+.+.||++++.++.-+++.... + .+
T Consensus 52 ~~eDi~lm~~~G~~~~R~si~W~ri~P~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~~ggw~~~~~~~ 131 (423)
T 1vff_A 52 YRDDIQLMTSLGYNAYRFSIEWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMKKGGFLREENLK 131 (423)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTTGGGSGGGHH
T ss_pred cHHHHHHHHHcCCCEEEeecCHHHhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEccCCcccHHHHhcCCCCCHHHHH
Confidence 367889999999999998632 2 3588899999999999998655432111 1 11
Q ss_pred HHHHHHHhhccccCCCceEEEEEeccccc
Q 018955 102 EANTWVQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 102 ~a~~wv~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
...+ ..+.+...+++ |+.-.+=||+.
T Consensus 132 ~f~~-ya~~~~~r~gd--V~~W~t~NEp~ 157 (423)
T 1vff_A 132 HWEK-YIEKVAELLEK--VKLVATFNEPM 157 (423)
T ss_dssp HHHH-HHHHHHHHTTT--CCEEEEEECHH
T ss_pred HHHH-HHHHHHHHhCC--CceEEEecCcc
Confidence 2222 22333334454 88888999974
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.067 Score=51.20 Aligned_cols=112 Identities=12% Similarity=0.134 Sum_probs=72.3
Q ss_pred HHHHHHHHhhCCCCeEEEec------C-------C-------hHHHHHHhcCCCEEEEecCCCchh--hh----hhcHHH
Q 018955 49 KRDVIALYNQNNIRRMRLYD------P-------N-------REALEALRGSNIEVMLGLPNNDLR--RI----ASNQAE 102 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~------~-------d-------~~vl~A~~~~glkV~lGv~~~~~~--~~----a~~~~~ 102 (348)
..|+.+++++.|++.||+== . + ..++..+.+.||+|+|-+...... .. ....+.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~~g~~~~~~~~~~~~ 124 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARWNGGIIGQGGPTNAQ 124 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEETTEETTTTSSCHHH
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcccCCcccCCCHHHHHH
Confidence 46678899999999999851 1 1 257888889999999998864310 00 012233
Q ss_pred HHHHHHhhccccCC-CceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCC-CceEEeee
Q 018955 103 ANTWVQNNVRNFAN-NVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLG-NQIKVSTA 164 (348)
Q Consensus 103 a~~wv~~~v~~~~~-~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~-~~I~VsT~ 164 (348)
..+.. +.|...+. ...| .+-+-||+... ....+.++++.+-+++++.+-. .-|-|...
T Consensus 125 ~~~~w-~~iA~ryk~~~~V-i~el~NEP~~~--~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~ 184 (340)
T 3qr3_A 125 FTSLW-SQLASKYASQSRV-WFGIMNEPHDV--NINTWAATVQEVVTAIRNAGATSQFISLPGN 184 (340)
T ss_dssp HHHHH-HHHHHHHTTCTTE-EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECS
T ss_pred HHHHH-HHHHHHhCCCCcE-EEEecCCCCCC--CHHHHHHHHHHHHHHHHhhCCCccEEEEeCC
Confidence 33322 33333332 3456 38899999753 4677888889999999998765 33555543
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.036 Score=55.19 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=52.4
Q ss_pred HHHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhh-hh-----hcHHHH
Q 018955 49 KRDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRR-IA-----SNQAEA 103 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a-----~~~~~a 103 (348)
.++++++++..|++.+|+=-+ + .+++..|.+.||++++.+..-+++. +. .+++.+
T Consensus 60 y~eDi~lm~~~G~~~~R~si~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~l~~~ggw~~r~~~ 139 (447)
T 1e4i_A 60 YEEDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDAGGWGNRRTI 139 (447)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTTTTSSTHHH
T ss_pred cHHHHHHHHHcCCCeEEecCcHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHHHHhcCCCCCchhH
Confidence 367899999999999998621 2 3688999999999999997654443 21 111222
Q ss_pred HHH--HHhhccccCCCceEEEEEeccccc
Q 018955 104 NTW--VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 104 ~~w--v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
..+ ..+.+...++ ++|+.-+.=||+.
T Consensus 140 ~~F~~ya~~~~~~~g-d~V~~W~t~NEp~ 167 (447)
T 1e4i_A 140 QAFVQFAETMFREFH-GKIQHWLTFNEPW 167 (447)
T ss_dssp HHHHHHHHHHHHHTB-TTBCEEEEEECHH
T ss_pred HHHHHHHHHHHHHhC-CcceeEEEecCcc
Confidence 111 1122222233 4688989999975
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.019 Score=57.29 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=52.1
Q ss_pred HHHHHHHhhCCCCeEEEecC-----------C-------hHHHHHHhcCCCEEEEecCCCchhh-hh-----hcHHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP-----------N-------REALEALRGSNIEVMLGLPNNDLRR-IA-----SNQAEANT 105 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~-----------d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a-----~~~~~a~~ 105 (348)
++++++++..|++.+|+=-+ + .+++..|.+.||++++++..-+++. +. .+++.+..
T Consensus 70 ~eDi~lm~~~G~~~~R~sisWsRi~P~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~ggw~~r~~~~~ 149 (454)
T 2o9p_A 70 KEDVQLMKQLGFLHYRFSVAWPRIMPAAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDEGGWTQRETIQH 149 (454)
T ss_dssp HHHHHHHHTTTCCEEEEECCHHHHCSSTTCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHHHHTTGGGSTHHHHH
T ss_pred HHHHHHHHhcCCceEEecccHHhhCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHHHHhcCCCCCcchHHH
Confidence 67889999999999998622 2 3688899999999999998654443 21 11222211
Q ss_pred H--HHhhccccCCCceEEEEEeccccc
Q 018955 106 W--VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 106 w--v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+ ..+.+...+ ++.|+.-.+=||+.
T Consensus 150 F~~ya~~~~~~~-gd~V~~W~t~NEp~ 175 (454)
T 2o9p_A 150 FKTYASVIMDRF-GERINWWNTINEPY 175 (454)
T ss_dssp HHHHHHHHHHHS-SSSCSEEEEEECHH
T ss_pred HHHHHHHHHHHh-CCcceeEEEecCcc
Confidence 1 112222223 35688889999975
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.047 Score=54.36 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=52.8
Q ss_pred CHHHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhhh-h-----hcHHH
Q 018955 48 SKRDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRRI-A-----SNQAE 102 (348)
Q Consensus 48 s~~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~-a-----~~~~~ 102 (348)
--++++++++..|++.+|+=-+ + .+++..+.+.||++++++..-+++.. . .+++.
T Consensus 59 ~~~eDi~lm~~~G~~~~R~si~W~ri~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h~d~P~~l~~~ggw~~r~~ 138 (449)
T 1qox_A 59 RVEEDVQLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQGGWGSRIT 138 (449)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSTHH
T ss_pred hhHHHHHHHHhcCCCeEEecCcHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHhcCCCCCchH
Confidence 3588899999999999998621 1 36889999999999999976544421 1 11121
Q ss_pred HHHH---HHhhccccCCCceEEEEEeccccc
Q 018955 103 ANTW---VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 103 a~~w---v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+..+ .+.-...| +++|+.-.+=||+.
T Consensus 139 ~~~f~~ya~~~~~~~--gd~V~~W~t~NEp~ 167 (449)
T 1qox_A 139 IDAFAEYAELMFKEL--GGKIKQWITFNEPW 167 (449)
T ss_dssp HHHHHHHHHHHHHHH--TTTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHHHh--CCCCceEEEccCCc
Confidence 1111 11112233 35688888999975
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.014 Score=63.80 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=62.9
Q ss_pred eeeEEecCCCCC---CCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCch--------hhhh
Q 018955 34 QIGVCYGMLGNN---LPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNNDL--------RRIA 97 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~~--------~~~a 97 (348)
..|+||-+.... ..+++. .++++|+.|++.||++.- ++..+..|...||.|+..++.... ....
T Consensus 330 l~Gvn~h~~~p~~G~~~~~e~~~~dl~lmK~~G~N~VR~~hyp~~~~fydlcDe~Gi~V~~E~~~~~~g~~~~~w~~~~~ 409 (1024)
T 1yq2_A 330 FHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDLETHGFEAGGWVENPS 409 (1024)
T ss_dssp EEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEEEEECSCBCGGGTTTTTTTCGG
T ss_pred EEEEEccCCccccccCCCHHHHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCEEEEcCCcccCCcccccccccCC
Confidence 569998655322 245544 567899999999999843 468999999999999987643110 0011
Q ss_pred ---hcHHHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 98 ---SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 98 ---~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
.-.++..+-+++.|.++...-.|..-.+|||.-.
T Consensus 410 ~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~ 446 (1024)
T 1yq2_A 410 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGT 446 (1024)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEEECCcCcch
Confidence 1122233334555555543345888999999864
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.025 Score=61.75 Aligned_cols=98 Identities=15% Similarity=-0.014 Sum_probs=62.3
Q ss_pred eeeEEecCCCCC--CCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCch------hhhh---
Q 018955 34 QIGVCYGMLGNN--LPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNNDL------RRIA--- 97 (348)
Q Consensus 34 ~~Gi~Y~~~~~~--~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~~------~~~a--- 97 (348)
..|+|+-+.... ..+.+. .++++|+.|++.||+..- ++..+..|...||.|+.-++.... ....
T Consensus 354 lrGvn~h~~~~~G~~~~~e~~~~dl~lmK~~G~N~IR~~hyp~~~~~ydlcDe~Gi~V~~E~~~~~~g~~~~~~~~~~~~ 433 (1010)
T 3bga_A 354 VKGTNRHEHSQLGRTVSKELMEQDIRLMKQHNINMVRNSHYPTHPYWYQLCDRYGLYMIDEANIESHGMGYGPASLAKDS 433 (1010)
T ss_dssp EEEEEECCCBTTBSCCCHHHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEEEEECSCBCGGGCSSTTCTTTCG
T ss_pred EECcccCCcccccCcCCHHHHHHHHHHHHHCCCCEEEeCCCCCCHHHHHHHHHCCCEEEEccCccccCccccCCcCCCCH
Confidence 569999776411 245544 467899999999999743 468999999999999987643110 0001
Q ss_pred hcHHHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 98 SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 98 ~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
.-.++..+-+++.|.++..--.|..=++|||.-.
T Consensus 434 ~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~ 467 (1010)
T 3bga_A 434 TWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGN 467 (1010)
T ss_dssp GGHHHHHHHHHHHHHHHTTCTTEEEEECCSSSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEECccCcCc
Confidence 1112223334455555433345778899999864
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.059 Score=53.73 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=52.1
Q ss_pred HHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhhh-h-----hcHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRRI-A-----SNQAEAN 104 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~-a-----~~~~~a~ 104 (348)
++++++++..|++.+|+=-+ + .+++..|.+.||++++++..-+++.. . .+++.+.
T Consensus 62 ~eDi~lm~~~G~~~~R~si~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h~d~P~~l~~~ggw~~r~~~~ 141 (453)
T 3ahx_A 62 KEDVQLLKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKLQDIGGWANPQVAD 141 (453)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSHHHHH
T ss_pred HHHHHHHHHhCCCeEecccCHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHhHhhCCCCCCchHHH
Confidence 67899999999999998621 2 36889999999999999976554431 1 1222222
Q ss_pred HH---HHhhccccCCCceEEEEEeccccc
Q 018955 105 TW---VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 105 ~w---v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
.+ .+.-...| ++.|+.-.+-||+.
T Consensus 142 ~f~~ya~~~~~~~--gd~V~~W~t~NEp~ 168 (453)
T 3ahx_A 142 YYVDYANLLFREF--GDRVKTWITHNEPW 168 (453)
T ss_dssp HHHHHHHHHHHHH--TTTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHh--CCccceEEEccCcc
Confidence 21 11112233 35688888999975
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.16 Score=50.23 Aligned_cols=269 Identities=16% Similarity=0.178 Sum_probs=131.7
Q ss_pred HHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhhhhh------cHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRRIAS------NQAEAN 104 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~------~~~~a~ 104 (348)
++++++++..|++.+|+=-. + .+++..+.+.||++++.+..-+++.... +++.+.
T Consensus 60 ~eDi~lm~~~G~~~~R~si~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~l~~~ggw~~~~~~~ 139 (431)
T 1ug6_A 60 EEDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETAF 139 (431)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSHHHHH
T ss_pred HHHHHHHHHcCCCEEEcccCHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcchhhcCCCCChHHHH
Confidence 67889999999999998621 1 3688899999999999998655433211 122221
Q ss_pred H---HHHhhccccCCCceEEEEEecccccC------------CC-cc--------hHHHHHHHHHHHHHHHHcCCCCceE
Q 018955 105 T---WVQNNVRNFANNVKFKYIAVGNEAKP------------GD-NF--------AQYLVPAMRNIQNAINAAGLGNQIK 160 (348)
Q Consensus 105 ~---wv~~~v~~~~~~~~I~~I~VGNE~l~------------~~-~~--------~~~Ll~~i~~v~~~L~~~gl~~~I~ 160 (348)
. ..+.-...| + +.|+.-..=||+.. -+ .. ...|+...+-+ +++++ .- +-+
T Consensus 140 ~F~~ya~~~~~~~-g-d~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av-~~~r~-~~--~~~ 213 (431)
T 1ug6_A 140 AFAEYAEAVARAL-A-DRVPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAV-EALRA-AG--ARR 213 (431)
T ss_dssp HHHHHHHHHHHHH-T-TTCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHH-HHHHH-TT--CSE
T ss_pred HHHHHHHHHHHHh-c-CCCceEEEecCcchhhccccccccCCCCccchHHHHHHHHHHHHHHHHHH-HHHHh-cC--CCe
Confidence 1 111222333 3 46888889999753 01 01 11233223323 33444 32 246
Q ss_pred Eeeeeecccc------------------------ccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCC
Q 018955 161 VSTAIETGAL------------------------GESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN 216 (348)
Q Consensus 161 VsT~~~~~~~------------------------~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~ 216 (348)
|+.+.+.... ...||+..-.+. +..+.-..-++.+....||+++|-|.=.--...
T Consensus 214 iG~~~~~~~~~P~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~-~~~p~~~~d~~~i~~~~DfiGinyY~~~~v~~~ 292 (431)
T 1ug6_A 214 VGIVLNFAPAYGEDPEAVDVADRYHNRFFLDPILGKGYPESPFRDP-PPVPILSRDLELVARPLDFLGVNYYAPVRVAPG 292 (431)
T ss_dssp EEEEEEECCEECSCHHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSC-CCCCCCTTHHHHHTCCCSEEEEEESCCEEEEEC
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHHhhhHHHhCCCCCHHHHHhc-ccCCCCHHHHHHhccCCCEEEEeccccceeccC
Confidence 6666543221 112333211100 000100112344667789999998863322111
Q ss_pred CCCCccccccccCCceeccCCcc-hhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC---CCCCCC---HHHHHH
Q 018955 217 RQISLDYALFRSQQTVVSDGSLS-YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG---DGALTN---VDNART 289 (348)
Q Consensus 217 ~~i~~~~a~f~~~~~~~~d~~~~-y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~---~~~vas---~~na~~ 289 (348)
.. +.... ...+.....+.+.. |-.=+-.++..++ ++ +++ ||+|||.|+..... .+.+-. .+--+.
T Consensus 293 ~~-~~~~~-~~~~~~~~t~~gW~i~P~gl~~~L~~~~---~r--Y~~-Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~ 364 (431)
T 1ug6_A 293 TG-TLPVR-YLPPEGPATAMGWEVYPEGLYHLLKRLG---RE--VPW-PLYVTENGAAYPDLWTGEAVVEDPERVAYLEA 364 (431)
T ss_dssp CS-SSCEE-ECCCSSCBCTTCCBCCHHHHHHHHHHHH---HH--CSS-CEEEEEECCCCCCCCSSCSSBCCHHHHHHHHH
T ss_pred CC-CCccc-cCCCCCCcCCCCCccChHHHHHHHHHHH---HH--hCC-CEEEEeccCCcCCCcCCCCccCCHHHHHHHHH
Confidence 00 00000 01111111122221 1111111222221 23 555 99999999987543 121111 122333
Q ss_pred HHHHHHHHHHhcCCCCCCCCccEEEEEeecC-CCCCCCCCCCceeeecCCCC
Q 018955 290 YNNNLIQHVKRGSPKRPGRPIETYIFAMFDE-NGKTGPEIERHWGLFAPTRQ 340 (348)
Q Consensus 290 y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe-~wK~~~~~E~~wGl~~~d~~ 340 (348)
+.+.+.+.++.|.+.+ .+|+.++.|- +|- .+..+.|||++-|..
T Consensus 365 hl~~~~~Ai~dGv~v~-----GY~~Wsl~Dn~eW~--~gy~~RfGl~~VD~~ 409 (431)
T 1ug6_A 365 HVEAALRAREEGVDLR-----GYFVWSLMDNFEWA--FGYTRRFGLYYVDFP 409 (431)
T ss_dssp HHHHHHHHHHHTCCEE-----EEEEECSBCCCCGG--GGGGSCCCSEEEETT
T ss_pred HHHHHHHHHHCCCCEE-----EEEEecCccccccc--cCCCCCccEEEecCC
Confidence 4444444444565543 4788888773 344 357889999998654
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.09 Score=52.76 Aligned_cols=80 Identities=19% Similarity=0.146 Sum_probs=51.8
Q ss_pred HHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhhh-hh-----cHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRRI-AS-----NQAEAN 104 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~-a~-----~~~~a~ 104 (348)
+++++|++..|++.+|+=-+ + .+++..|.+.||+.++.+..-+++.. .. +++.+.
T Consensus 74 ~eDi~lm~~lG~~~yRfsIsWsRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~GGw~~r~~v~ 153 (479)
T 1gnx_A 74 REDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAGGWPERATAE 153 (479)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTTCTTSTHHHH
T ss_pred HHHHHHHHHcCCCEEEecccHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHHHHhcCCCCCHHHHH
Confidence 67899999999999998622 2 36899999999999999986554432 11 112111
Q ss_pred HH--HHhhccccCCCceEEEEEeccccc
Q 018955 105 TW--VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 105 ~w--v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
.+ ..+.+...+ +++|+.-+.=||+.
T Consensus 154 ~F~~ya~~~~~~~-gd~V~~W~t~NEp~ 180 (479)
T 1gnx_A 154 RFAEYAAIAADAL-GDRVKTWTTLNEPW 180 (479)
T ss_dssp HHHHHHHHHHHHH-TTTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHh-CCcceeEEEecCcc
Confidence 11 111222222 35788888899975
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.022 Score=55.88 Aligned_cols=105 Identities=13% Similarity=0.021 Sum_probs=67.6
Q ss_pred HHHHHHHhhCCCCeEEEe----c----------CC------hHHHHHHhcCCCEEEEecCCC-------chh------hh
Q 018955 50 RDVIALYNQNNIRRMRLY----D----------PN------REALEALRGSNIEVMLGLPNN-------DLR------RI 96 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY----~----------~d------~~vl~A~~~~glkV~lGv~~~-------~~~------~~ 96 (348)
+++++.+++.|++.|||- . .+ ..++..+++.||+|+|.+... +.. ..
T Consensus 76 e~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~~~~~w 155 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKF 155 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCT
T ss_pred HHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCCCCCCC
Confidence 445678889999999993 1 01 257788889999999977631 000 00
Q ss_pred --hhcHHHHHHHHHhhccccCCC----ceEEEEEecccccCCCcchHHHH-HHHHHHHHHHHHc-CC
Q 018955 97 --ASNQAEANTWVQNNVRNFANN----VKFKYIAVGNEAKPGDNFAQYLV-PAMRNIQNAINAA-GL 155 (348)
Q Consensus 97 --a~~~~~a~~wv~~~v~~~~~~----~~I~~I~VGNE~l~~~~~~~~Ll-~~i~~v~~~L~~~-gl 155 (348)
....+...+.+ +.|...|.+ ..|.++-+.||+.........+. ++++.+-+++++. +-
T Consensus 156 ~~~~~~~~~~~~w-~~ia~ry~~~~y~~~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~~~~ 221 (408)
T 1h4p_A 156 LEDSNLAVTINVL-NYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKS 221 (408)
T ss_dssp TSHHHHHHHHHHH-HHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHH-HHHHHHHcccCCCCeEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 01223333322 334444444 57999999999975333467787 8888888888887 43
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.048 Score=54.83 Aligned_cols=143 Identities=14% Similarity=0.129 Sum_probs=90.1
Q ss_pred HHHHHHHHhhCCCCeEEEe-cC------------------------------C----hHHHHHHhcCCCEEEEecCCCch
Q 018955 49 KRDVIALYNQNNIRRMRLY-DP------------------------------N----REALEALRGSNIEVMLGLPNNDL 93 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY-~~------------------------------d----~~vl~A~~~~glkV~lGv~~~~~ 93 (348)
+.+++++++..++..||.- ++ + ...++-+...|++.++.++...
T Consensus 53 R~d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g~- 131 (502)
T 1qw9_A 53 RQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGT- 131 (502)
T ss_dssp BHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSS-
T ss_pred HHHHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCCC-
Confidence 4789999999999999983 11 0 2467778889999999998752
Q ss_pred hhhhhcHHHHHHHHHhhccc------------c-CC-CceEEEEEecccccCC---Cc-chHHHHHHHHHHHHHHHHcCC
Q 018955 94 RRIASNQAEANTWVQNNVRN------------F-AN-NVKFKYIAVGNEAKPG---DN-FAQYLVPAMRNIQNAINAAGL 155 (348)
Q Consensus 94 ~~~a~~~~~a~~wv~~~v~~------------~-~~-~~~I~~I~VGNE~l~~---~~-~~~~Ll~~i~~v~~~L~~~gl 155 (348)
..++++.+|+. .+.. + ++ .-.|+.+-||||.--. +. ++++-....+...+++|+.
T Consensus 132 ----~~~~~a~~~ve-y~n~~~~t~~~~lR~~~G~~ep~~v~yweiGNE~~g~w~~g~~t~~~Y~~~~~~~a~aik~~-- 204 (502)
T 1qw9_A 132 ----RGIDAARNLVE-YCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIACEAAKVMKWV-- 204 (502)
T ss_dssp ----CCHHHHHHHHH-HHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHHHHHHHHHHH--
T ss_pred ----CCHHHHHHHHH-HhCCCCCCcHHHHHHHcCCCCCCCCeEEEEeCCCCCCcCCCCcCHHHHHHHHHHHHHHHHHh--
Confidence 13455666654 2211 0 01 1378999999997522 21 5666666667777777766
Q ss_pred CCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCccccccccc
Q 018955 156 GNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPY 210 (348)
Q Consensus 156 ~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPf 210 (348)
.++|+|.-.-... . .. | +.......+++...+..|++.+|.||.
T Consensus 205 dP~i~via~G~~~--~-~~-p-------~~~~W~~~~l~~~~~~vD~is~H~Y~~ 248 (502)
T 1qw9_A 205 DPTIELVVCGSSN--R-NM-P-------TFAEWEATVLDHTYDHVDYISLHQYYG 248 (502)
T ss_dssp CTTCEEEECCCSC--T-TS-T-------TTTHHHHHHHHHHGGGCSEEEEEEEEC
T ss_pred CCCeEEEEeCCCc--c-cC-c-------ccCchHHHHHHhcccCCCEEEEeeCCC
Confidence 2357766321100 0 00 1 112334566777777899999999974
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.044 Score=54.88 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=76.6
Q ss_pred eeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe----c--------CC--------hHHHHHHhcCCCEEEEecCCCch
Q 018955 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY----D--------PN--------REALEALRGSNIEVMLGLPNNDL 93 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY----~--------~d--------~~vl~A~~~~glkV~lGv~~~~~ 93 (348)
..|+++.....+.+ ..+.++.+++.|++.||++ + .+ ..++..+.+.||+|+|-+.....
T Consensus 27 lrGv~~~~~w~~~~-~~~d~~~i~~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~~~ 105 (491)
T 2y8k_A 27 LRGPYTSTEWTAAA-PYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGLYLVITIGNGAN 105 (491)
T ss_dssp CEEEEEECSSSCCC-CHHHHGGGGGGTCCEEEEEEEECCTTTTSTTCCCTTTTHHHHHHHHHHHHHHTCEEEEEEECTTC
T ss_pred eecccccCCcCCCC-CHHHHHHHHHcCCCEEEECceeecccccCCCccChhHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Confidence 67885554433333 3566788899999999996 1 12 24677888999999998765321
Q ss_pred hhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-cchH------HHHHHHHHHHHHHHHcCCCCceEEe
Q 018955 94 RRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-NFAQ------YLVPAMRNIQNAINAAGLGNQIKVS 162 (348)
Q Consensus 94 ~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-~~~~------~Ll~~i~~v~~~L~~~gl~~~I~Vs 162 (348)
. ...+.+.+.+..+.-..+|.....|. +-+.||+.... .... .+.++++.+-+++++.+-..-|-|.
T Consensus 106 ~-~~~~~~~~~~~w~~iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~ 179 (491)
T 2y8k_A 106 N-GNHNAQWARDFWKFYAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLF 179 (491)
T ss_dssp T-TCCCHHHHHHHHHHHHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred C-ccccHHHHHHHHHHHHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEEe
Confidence 0 11223444443333334443333465 99999997422 1222 2788888888888887754434444
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.03 Score=56.19 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=44.5
Q ss_pred cEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecC-CCCCCCCCCCceeeecCCC
Q 018955 264 GIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDE-NGKTGPEIERHWGLFAPTR 339 (348)
Q Consensus 264 ~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe-~wK~~~~~E~~wGl~~~d~ 339 (348)
||+|||.|++...+ . --+.--+.+.+.+.+.++.|.+.+ .||..++.|- +|- .+..+.|||++-|.
T Consensus 368 Pi~ITENG~~~~~D-~--~Ri~yl~~hl~~~~~Ai~dGv~V~-----GY~~WSl~Dn~EW~--~Gy~~RfGL~~VD~ 434 (473)
T 3apg_A 368 PMIITENGMADAAD-R--YRPHYLVSHLKAVYNAMKEGADVR-----GYLHWSLTDNYEWA--QGFRMRFGLVYVDF 434 (473)
T ss_dssp CEEEEECCCCCTTC-S--SHHHHHHHHHHHHHHHHTTTCCEE-----EEEESCSBCCCCGG--GGGGSCCCSEEECT
T ss_pred eEEEEecCCCCCCc-h--HHHHHHHHHHHHHHHHHHcCCCEE-----EEEEecccccCccc--ccccCcCCeEEecC
Confidence 99999999986522 1 334556667777666665555432 4777777773 244 34788999999874
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.069 Score=53.87 Aligned_cols=143 Identities=14% Similarity=0.180 Sum_probs=90.1
Q ss_pred HHHHHHHHhhCCCCeEEEe-cC------------------------------C----hHHHHHHhcCCCEEEEecCCCch
Q 018955 49 KRDVIALYNQNNIRRMRLY-DP------------------------------N----REALEALRGSNIEVMLGLPNNDL 93 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY-~~------------------------------d----~~vl~A~~~~glkV~lGv~~~~~ 93 (348)
+.+++++++..++..||.= ++ + ...++-+...|++.+++++...
T Consensus 61 R~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g~- 139 (513)
T 2c7f_A 61 RKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGT- 139 (513)
T ss_dssp BHHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCSS-
T ss_pred HHHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCCC-
Confidence 4688999999999999983 11 0 2577788889999999999752
Q ss_pred hhhhhcHHHHHHHHHhhccc------------c-CC-CceEEEEEecccccCC---Cc-chHHHHHHHHHHHHHHHHcCC
Q 018955 94 RRIASNQAEANTWVQNNVRN------------F-AN-NVKFKYIAVGNEAKPG---DN-FAQYLVPAMRNIQNAINAAGL 155 (348)
Q Consensus 94 ~~~a~~~~~a~~wv~~~v~~------------~-~~-~~~I~~I~VGNE~l~~---~~-~~~~Ll~~i~~v~~~L~~~gl 155 (348)
..++++.+|+. .+.. + ++ .-.|+.+-||||.--. +. ++++-....+...+++++..
T Consensus 140 ----~~~~~a~~~ve-y~n~~~~t~~~~lR~~~G~~ep~~vkyweiGNE~~g~w~~g~~t~~~Y~~~~~~~a~a~k~~d- 213 (513)
T 2c7f_A 140 ----RGISDACNLLE-YCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMID- 213 (513)
T ss_dssp ----CCHHHHHHHHH-HHHCCSSSHHHHHHHHTTCCSCCCCCEEEESCCCCCTTSTTCCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ----CCHHHHHHHHH-HhCCCCCChHHHHHHHcCCCCCCCceEEEeccCcccccccCCCCHHHHHHHHHHHHHHHHHhC-
Confidence 23455666654 2211 0 01 1368999999997521 22 56666666677777777662
Q ss_pred CCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCccccccccc
Q 018955 156 GNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPY 210 (348)
Q Consensus 156 ~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPf 210 (348)
++|+|.-.-... . .. |. .......+++...+..|++.+|.||.
T Consensus 214 -P~i~via~G~~~--~-~~-~~-------~~~W~~~~l~~~~~~vD~is~H~Y~~ 256 (513)
T 2c7f_A 214 -PSIELVACGSSS--K-DM-PT-------FPQWEATVLDYAYDYVDYISLHQYYG 256 (513)
T ss_dssp -TTCEEEECCCSC--T-TS-TT-------TTHHHHHHHHHHTTTCCEEEEEEEEC
T ss_pred -CCcEEEEeCCCC--C-CC-cc-------cCchHHHHHHhcccCCCEEEEeecCC
Confidence 357766321100 0 00 10 11234556676767889999999974
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.062 Score=55.52 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=71.8
Q ss_pred HHHHHHHhhCCCCeEEEec------CC------------hHHHHHHhcCCCEEEEecC--------CCchhhhh------
Q 018955 50 RDVIALYNQNNIRRMRLYD------PN------------REALEALRGSNIEVMLGLP--------NNDLRRIA------ 97 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~------~d------------~~vl~A~~~~glkV~lGv~--------~~~~~~~a------ 97 (348)
.++++++|+.|++.||+|- +. ...++.|++.||+|++... ....+...
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~ 119 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDI 119 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTC
T ss_pred HHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecCcccccccccCCCchhhccCCCc
Confidence 5678899999999999992 11 3448999999999999874 11111110
Q ss_pred -------hcHHHHHHHHHhhccccCC-----CceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeee
Q 018955 98 -------SNQAEANTWVQNNVRNFAN-----NVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAI 165 (348)
Q Consensus 98 -------~~~~~a~~wv~~~v~~~~~-----~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~ 165 (348)
.-.++..+|+++-+..+.+ ...|..+.||||.=.-++ --.+++.+++.+++.|+.. ++.-|.+
T Consensus 120 ~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg~----~~~y~~~l~~~l~~~g~~~-vp~~~~~ 194 (612)
T 3d3a_A 120 KLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFGI----DKPYISEIRDMVKQAGFTG-VPLFQCD 194 (612)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTCC----CHHHHHHHHHHHHHHTCCS-SCEEEEE
T ss_pred eecCCCHHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccCc----hHHHHHHHHHHHHHcCCCc-hhheecc
Confidence 1123445555544444432 356889999999842111 2357888889999988743 7765554
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.34 Score=48.55 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=51.5
Q ss_pred HHHHHHHhhCCCCeEEEecC-------------C-------hHHHHHHhcCCCEEEEecCCCchhh-hhh------cHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP-------------N-------REALEALRGSNIEVMLGLPNNDLRR-IAS------NQAE 102 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~-------------d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a~------~~~~ 102 (348)
++++++++..|++.+|+=-. + .+++..+.+.||++++.+..-+++. +.. ++..
T Consensus 74 ~eDi~lm~~~G~~~~R~sisW~Ri~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~~~ggw~~~~~ 153 (479)
T 2xhy_A 74 KEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKV 153 (479)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHHSCGGGSTHH
T ss_pred HHHHHHHHHcCCCEEEeeCCHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCHHHHhhcCCCCCHHH
Confidence 56788999999999998621 1 2588999999999999998654432 111 1111
Q ss_pred HHHH--HHhhccccCCCceEEEEEeccccc
Q 018955 103 ANTW--VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 103 a~~w--v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+..+ ..+.+...++ +.|+.-..-||+.
T Consensus 154 ~~~F~~ya~~~~~~~g-d~V~~w~t~NEp~ 182 (479)
T 2xhy_A 154 VDFFVRFAEVVFERYK-HKVKYWMTFNEIN 182 (479)
T ss_dssp HHHHHHHHHHHHHHTT-TTCCEEEEETTTT
T ss_pred HHHHHHHHHHHHHHhC-CCCCcEEEecCcc
Confidence 1111 1223333333 4788888999974
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.094 Score=51.32 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=67.5
Q ss_pred HHHHHHhhCCCCeEEEe------cC---C----------hHHHHHHhcCCCEEEEecCCC---c---h-hh------h--
Q 018955 51 DVIALYNQNNIRRMRLY------DP---N----------REALEALRGSNIEVMLGLPNN---D---L-RR------I-- 96 (348)
Q Consensus 51 ~v~~ll~~~~~~~VRlY------~~---d----------~~vl~A~~~~glkV~lGv~~~---~---~-~~------~-- 96 (348)
+.++.|++.|++.|||= .. + ..++..+.+.||+|+|.+... . . .. .
T Consensus 77 ~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~pG~qng~~~sG~~~~~~w~~ 156 (399)
T 3n9k_A 77 QDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQN 156 (399)
T ss_dssp HHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTS
T ss_pred HHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEecCCCcccccccCCCCCCCCCCCC
Confidence 45677889999999992 11 1 257788889999999986421 0 0 00 0
Q ss_pred hhcHHHHHHHHHhhccccCCC---ceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCC
Q 018955 97 ASNQAEANTWVQNNVRNFANN---VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLG 156 (348)
Q Consensus 97 a~~~~~a~~wv~~~v~~~~~~---~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~ 156 (348)
....+...+.++.-...|... ..|.++-+-||+...+.....+.++.+.+-+++++.+-.
T Consensus 157 ~~~~~~~~~~w~~iA~ry~~~~y~~~V~~~el~NEP~~~~~~~~~~~~~~~~a~~~IR~~~p~ 219 (399)
T 3n9k_A 157 GDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSV 219 (399)
T ss_dssp TTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCceEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHhcCCC
Confidence 012333333333223333222 568999999999864334677888888888888888643
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.057 Score=51.84 Aligned_cols=255 Identities=15% Similarity=0.087 Sum_probs=132.1
Q ss_pred CCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe-c--------------CC--hHHHHHHhcCCCEEE--EecCCCc
Q 018955 32 SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY-D--------------PN--REALEALRGSNIEVM--LGLPNND 92 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY-~--------------~d--~~vl~A~~~~glkV~--lGv~~~~ 92 (348)
.-.+|.+-+.....+.+-.+..+++++. |+.|..= + -. ..++.-+++.||+|. .-+|..+
T Consensus 30 ~f~~G~Av~~~~~~~~~~~~y~~~~~~~-Fn~~t~eN~mKW~~iep~~G~~~f~~~D~~v~~a~~~gi~vrgHtLvWh~q 108 (341)
T 3niy_A 30 NIYIGFAAINNFWSLSDEEKYMEVARRE-FNILTPENQMKWDTIHPERDRYNFTPAEKHVEFAEENNMIVHGHTLVWHNQ 108 (341)
T ss_dssp TCEEEEEECTTGGGSTTHHHHHHHHHHH-CSEEEESSTTSHHHHCCBTTEEECHHHHHHHHHHHHTTCEEEEEEEECSSS
T ss_pred CCeEEEEeccCchhccCCHHHHHHHHHh-CCEEEECcccchHHhcCCCCccChHHHHHHHHHHHHCCCeEEeeecccccc
Confidence 4467888732212233344555666654 7777661 1 11 368888889999986 3468765
Q ss_pred hhhhhh--------cHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cc------hHHHHHHHHHHHHHHHHc
Q 018955 93 LRRIAS--------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NF------AQYLVPAMRNIQNAINAA 153 (348)
Q Consensus 93 ~~~~a~--------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~------~~~Ll~~i~~v~~~L~~~ 153 (348)
.+..-. -.+...+++++-+..| + .+|...-|-||++..+ .. .+.+..+.+..|++
T Consensus 109 ~P~W~~~~~~~~~~~~~~~~~~i~~v~~rY-~-g~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~---- 182 (341)
T 3niy_A 109 LPGWITGREWTKEELLNVLEDHIKTVVSHF-K-GRVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEA---- 182 (341)
T ss_dssp CCHHHHTSCCCHHHHHHHHHHHHHHHHHHT-T-TTCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHH----
T ss_pred CchhhhcCCCCHHHHHHHHHHHHHHHHHHc-C-CCccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHH----
Confidence 554322 1234556666666666 3 5799999999999642 11 23334444444443
Q ss_pred CCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCC---cccccccccccccCCCCCCccccccccCC
Q 018955 154 GLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRS---PLLLNLYPYFAIAGNRQISLDYALFRSQQ 230 (348)
Q Consensus 154 gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d---~~~vN~yPff~~~~~~~i~~~~a~f~~~~ 230 (348)
+++.++-.-| +++. .++ .- ...+..+++.|.+.+- =+++-.| |...
T Consensus 183 --dP~a~L~~ND-yn~e---~~~---~k----~~~~~~lv~~l~~~GvpIdgIG~Q~H--~~~~---------------- 231 (341)
T 3niy_A 183 --DPDAILIYND-YSIE---EIN---AK----SNFVYNMIKELKEKGVPVDGIGFQMH--IDYR---------------- 231 (341)
T ss_dssp --CTTSEEEEEE-SSCS---SSS---HH----HHHHHHHHHHHHHTTCCCCEEEECCE--EETT----------------
T ss_pred --CCCceEEeec-cccc---cCc---hH----HHHHHHHHHHHHHCCCCcceEeeeee--cCCC----------------
Confidence 2235554433 1111 010 00 1223445555655442 2222222 1110
Q ss_pred ceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 018955 231 TVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPI 310 (348)
Q Consensus 231 ~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~ 310 (348)
...+ .-+.+.++. +.. -+++|.|||.+-+.........+.+.|+.+++++++.+.+ .| .+
T Consensus 232 ------~~~~-~~~~~~l~~----~a~---lGl~v~iTElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~----~~--~v 291 (341)
T 3niy_A 232 ------GLNY-DSFRRNLER----FAK---LGLQIYITEMDVRIPLSGSEDYYLKKQAEICAKIFDICLD----NP--AV 291 (341)
T ss_dssp ------CCCH-HHHHHHHHH----HHH---TTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHT----CT--TE
T ss_pred ------CCCH-HHHHHHHHH----HHH---cCCeEEEEeccccCCCCCChhHHHHHHHHHHHHHHHHHhc----CC--Ce
Confidence 0001 112222232 233 4579999998754311100002356788899999988752 23 33
Q ss_pred c-EEEEEeecC-CCCCC-CCCCCceeeecCCCCeeee
Q 018955 311 E-TYIFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 311 ~-~f~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~ 344 (348)
. +.+...-|. .|+++ ...+.+-|||+.|.+||..
T Consensus 292 ~git~Wg~~D~~sW~~~~~~~~~~plLfd~~~~pKpA 328 (341)
T 3niy_A 292 KAIQFWGFTDKYSWVPGFFKGYGKALLFDENYNPKPC 328 (341)
T ss_dssp EEEEESCSBTTSCSHHHHSTTEECCSSBCTTSCBCHH
T ss_pred EEEEEECCccCCccCCCCCCCCCCCccCCCCcCCCHH
Confidence 3 444445554 37653 1235667999999999964
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.48 Score=47.31 Aligned_cols=80 Identities=13% Similarity=0.080 Sum_probs=52.7
Q ss_pred HHHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhhh-h-----hcHHHH
Q 018955 49 KRDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRRI-A-----SNQAEA 103 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~~-a-----~~~~~a 103 (348)
.+++++|++..|++.+|+=-+ + .+++..|.+.||++++++..-+++.. . .+++.+
T Consensus 56 y~eDi~lm~~~G~~~~R~sisWsRi~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~ggw~~r~~~ 135 (468)
T 1pbg_A 56 YPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNRENI 135 (468)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHHHHTTGGGSTHHH
T ss_pred CHHHHHHHHHhCCCEEEeccCHhhhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCccCHHHHhcCCCCChHHH
Confidence 367899999999999998622 1 36889999999999999987555431 1 011211
Q ss_pred HHH--HHhhccccCCCceEEEEEeccccc
Q 018955 104 NTW--VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 104 ~~w--v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
... ..+.+...++ + |+.-+.-||+.
T Consensus 136 ~~F~~ya~~~~~~~g-d-V~~W~t~NEp~ 162 (468)
T 1pbg_A 136 EHFIDYAAFCFEEFP-E-VNYWTTFNEIG 162 (468)
T ss_dssp HHHHHHHHHHHHHCT-T-CCEEEEESCHH
T ss_pred HHHHHHHHHHHHHhC-C-CCEEEEecCch
Confidence 111 1122333344 4 99999999974
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.12 Score=54.93 Aligned_cols=96 Identities=11% Similarity=0.011 Sum_probs=58.3
Q ss_pred eeeEEecCCCCC---CCCHH---HHHHHHhhCCCCeEEEe--cCChHHHHHHhcCCCEEEEecCCC---c-h-hhhhh-c
Q 018955 34 QIGVCYGMLGNN---LPSKR---DVIALYNQNNIRRMRLY--DPNREALEALRGSNIEVMLGLPNN---D-L-RRIAS-N 99 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~---~v~~ll~~~~~~~VRlY--~~d~~vl~A~~~~glkV~lGv~~~---~-~-~~~a~-~ 99 (348)
..|+|+-+.... ..+.+ +.++++|..|++.||+. -.++..+.+|...||-|+.-+... . . ..... .
T Consensus 288 lkGvn~h~d~~~~G~a~~~~~~~~dl~~~K~~G~N~iR~~h~p~~~~~~dlcDe~GilV~~E~~~~w~~~~~~~~~~~~~ 367 (801)
T 3gm8_A 288 IKGVCDHHTVGAVGAAVPDDLLHYRLKLLKDMGCNAIRTSHNPFSPAFYNLCDTMGIMVLNEGLDGWNQPKAADDYGNYF 367 (801)
T ss_dssp EEEEEECSCCGGGTTCCCHHHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEEEEECCSSSSSCSSTTSGGGTH
T ss_pred EEccCcCCCCcccCccCCHHHHHHHHHHHHHCCCcEEEecCCCCcHHHHHHHHHCCCEEEECCchhhcCCCCcccccHHH
Confidence 568998654321 23444 35678999999999995 345789999999999999887321 0 0 00000 0
Q ss_pred HHHHHHHHHhhccccCCCceEEEEEecccc
Q 018955 100 QAEANTWVQNNVRNFANNVKFKYIAVGNEA 129 (348)
Q Consensus 100 ~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~ 129 (348)
.+...+.+++.|.++...-.|..-.+|||.
T Consensus 368 ~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~ 397 (801)
T 3gm8_A 368 DEWWQKDMTDFIKRDRNHPSIIMWSIGNEV 397 (801)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECccCC
Confidence 111122233444443322347778999999
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.68 Score=45.92 Aligned_cols=45 Identities=27% Similarity=0.285 Sum_probs=36.0
Q ss_pred HHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchh
Q 018955 50 RDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLR 94 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~ 94 (348)
++++++++..|++.+|+=-. + .+++..+.+.||++++.+..-+++
T Consensus 61 ~eDi~l~~~lG~~~~R~si~W~Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H~dlP 124 (444)
T 4hz8_A 61 EQDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP 124 (444)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCB
T ss_pred HHHHHHHHhcCCCEEEEeccHHHcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 67899999999999998411 2 368899999999999999764443
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.3 Score=49.99 Aligned_cols=144 Identities=15% Similarity=0.184 Sum_probs=90.3
Q ss_pred HHHHHHHHhhCCCCeEEE--------ecCC---------------------------hHHHHHHhcCCCEEEEecCCCch
Q 018955 49 KRDVIALYNQNNIRRMRL--------YDPN---------------------------REALEALRGSNIEVMLGLPNNDL 93 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRl--------Y~~d---------------------------~~vl~A~~~~glkV~lGv~~~~~ 93 (348)
+.+++++++..++..||. |... ...++-+...|++.++.++...
T Consensus 93 R~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G~- 171 (574)
T 2y2w_A 93 RQDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMGT- 171 (574)
T ss_dssp BHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCSS-
T ss_pred HHHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCCC-
Confidence 468999999999999999 4210 1567778889999999999742
Q ss_pred hhhhhcHHHHHHHHHhhccc-----------c-CC-CceEEEEEecccccCC---Cc-chHHHHHHHHHHHHHHHHcCCC
Q 018955 94 RRIASNQAEANTWVQNNVRN-----------F-AN-NVKFKYIAVGNEAKPG---DN-FAQYLVPAMRNIQNAINAAGLG 156 (348)
Q Consensus 94 ~~~a~~~~~a~~wv~~~v~~-----------~-~~-~~~I~~I~VGNE~l~~---~~-~~~~Ll~~i~~v~~~L~~~gl~ 156 (348)
...+++.+|+.=.-.+ + ++ .-.|+++-||||.--. +. ++++-....+...+++|+. +
T Consensus 172 ----~~~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIGNE~~g~W~~G~~t~e~Y~~~~~~~a~AiK~v--d 245 (574)
T 2y2w_A 172 ----RGLKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIGNEMDGPWQVGHMSPEEYAGAVDKVAHAMKLA--E 245 (574)
T ss_dssp ----CCHHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEESSCTTSTTSTTCCCHHHHHHHHHHHHHHHHHH--C
T ss_pred ----CCHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEeccccccccccCCCCHHHHHHHHHHHHHHHHHh--C
Confidence 2345566675411110 0 01 1369999999997421 22 4556666666677777766 2
Q ss_pred CceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCccccccccc
Q 018955 157 NQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPY 210 (348)
Q Consensus 157 ~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPf 210 (348)
++|+|.-.-... .. . | +.......+++++.+..|++.+|.|+.
T Consensus 246 P~i~via~G~~~-~~--~-p-------~~~~W~~~~l~~~~~~vD~vs~H~Y~~ 288 (574)
T 2y2w_A 246 SGLELVACGSSG-AY--M-P-------TFGTWEKTVLTKAYENLDFVSCHAYYF 288 (574)
T ss_dssp TTCEEEEECCSC-TT--S-T-------TTTHHHHHHHHHHGGGCCEEEEEEEEC
T ss_pred CCeEEEEecCCc-cc--C-c-------cccchHHHHHHhcccCCCEEEEeecCC
Confidence 357766331100 00 0 1 111344567777778899999999974
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.067 Score=58.09 Aligned_cols=129 Identities=11% Similarity=0.035 Sum_probs=86.2
Q ss_pred eeeEEecCCCCCCCCH---HHHHHHHhhCCCCeEEEecC-------------C-----hHHHHHHhcCCCEEEEecC---
Q 018955 34 QIGVCYGMLGNNLPSK---RDVIALYNQNNIRRMRLYDP-------------N-----REALEALRGSNIEVMLGLP--- 89 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~---~~v~~ll~~~~~~~VRlY~~-------------d-----~~vl~A~~~~glkV~lGv~--- 89 (348)
.+|-+|-+.+ .|++ .++++++|..|++.|++|-. + ...|+.+++.||.|+|...
T Consensus 22 l~sG~~hy~r--~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~GPyi 99 (971)
T 1tg7_A 22 IFSGEVHPYR--LPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYI 99 (971)
T ss_dssp EEEEECCGGG--SCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCC
T ss_pred EEEEEECccc--CCchHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecCCcc
Confidence 3455666555 4533 67788999999999999832 1 4688899999999999875
Q ss_pred -----CCchhhhhh------------cHHHHHHHHHhhcc---ccC--CCceEEEEEecccccCCC--cchHHHHHHHHH
Q 018955 90 -----NNDLRRIAS------------NQAEANTWVQNNVR---NFA--NNVKFKYIAVGNEAKPGD--NFAQYLVPAMRN 145 (348)
Q Consensus 90 -----~~~~~~~a~------------~~~~a~~wv~~~v~---~~~--~~~~I~~I~VGNE~l~~~--~~~~~Ll~~i~~ 145 (348)
+...+..-. -.+++.+|+.+-+. ++. ....|..+-|.||.=... +.......||+.
T Consensus 100 ~aE~~~GG~P~WL~~~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~ 179 (971)
T 1tg7_A 100 NAEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQY 179 (971)
T ss_dssp CTTBGGGGCCGGGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHH
T ss_pred cceecCCCcceeecccCCEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHH
Confidence 222222111 13455556543333 221 234699999999984321 112348899999
Q ss_pred HHHHHHHcCCCCceEEeeeee
Q 018955 146 IQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 146 v~~~L~~~gl~~~I~VsT~~~ 166 (348)
+++.+++.|. .||++|.+-
T Consensus 180 l~~~~r~~g~--~vPl~tn~~ 198 (971)
T 1tg7_A 180 IEDHARDAGI--VVPFISNDA 198 (971)
T ss_dssp HHHHHHHTTC--CSCBBCCBS
T ss_pred HHHHHHHhCC--CeeEEEecC
Confidence 9999999987 489999863
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.8 Score=47.51 Aligned_cols=111 Identities=16% Similarity=0.144 Sum_probs=72.0
Q ss_pred HHHHHHHhhCCCCeEEEecC-------------C-----hHHHHHHhcCCCEEEEec--------CCCchhhhh------
Q 018955 50 RDVIALYNQNNIRRMRLYDP-------------N-----REALEALRGSNIEVMLGL--------PNNDLRRIA------ 97 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~-------------d-----~~vl~A~~~~glkV~lGv--------~~~~~~~~a------ 97 (348)
.++++.+|..|++.||+|-. + ...|+.+++.||.|+|.. .+..++.+-
T Consensus 43 ~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i 122 (654)
T 3thd_A 43 KDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESI 122 (654)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTC
T ss_pred HHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccCCccccccCCCcCChHHhcCCCc
Confidence 56788999999999999833 1 368888999999999987 111111100
Q ss_pred ----h---cHHHHHHHHHhh---ccc--cCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHc-CCCCceEEeee
Q 018955 98 ----S---NQAEANTWVQNN---VRN--FANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAA-GLGNQIKVSTA 164 (348)
Q Consensus 98 ----~---~~~~a~~wv~~~---v~~--~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~-gl~~~I~VsT~ 164 (348)
. -.+++.+|+.+- +.+ |-....|..+-|.||.=.-+. .=-.||+.+++.+++. |.. ++.-|.
T Consensus 123 ~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~---~d~~Ym~~l~~~~~~~~Gi~--v~l~t~ 197 (654)
T 3thd_A 123 LLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFA---CDFDYLRFLQKRFRHHLGDD--VVLFTT 197 (654)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSC---CCHHHHHHHHHHHHHHHCSS--SEEEEE
T ss_pred eEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccc---ccHHHHHHHHHHHHHhcCCc--eeeEee
Confidence 1 124555665433 333 223467889999999742111 0136899999988886 774 666666
Q ss_pred e
Q 018955 165 I 165 (348)
Q Consensus 165 ~ 165 (348)
|
T Consensus 198 D 198 (654)
T 3thd_A 198 D 198 (654)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.15 Score=48.52 Aligned_cols=224 Identities=12% Similarity=0.022 Sum_probs=116.7
Q ss_pred HHHHHHhcCCCEEEE--ecCCCchhhhhh----c----HHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cc-
Q 018955 72 EALEALRGSNIEVML--GLPNNDLRRIAS----N----QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NF- 135 (348)
Q Consensus 72 ~vl~A~~~~glkV~l--Gv~~~~~~~~a~----~----~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~- 135 (348)
.++.-++..||+|.- -||....+.... + .+...++|++-+..| + .+|..--|.||++... ..
T Consensus 67 ~~v~~a~~~gi~vrGHtLvWh~q~P~W~~~~~~~~~~l~~~~~~~I~~v~~rY-~-g~i~~WDVvNE~~~~~g~~r~~~~ 144 (327)
T 3u7b_A 67 QHAAAATSRGYELRCHTLVWHSQLPSWVANGNWNNQTLQAVMRDHINAVMGRY-R-GKCTHWDVVNEALNEDGTYRDSVF 144 (327)
T ss_dssp HHHHHHHTTTCEEEEEEEEESTTCCHHHHTCCCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEECCBCTTSSBCCCHH
T ss_pred HHHHHHHHCCCEEEEeeeecCCcCcHHHhcCCCCHHHHHHHHHHHHHHHHHHh-C-CCceEEEEeccccCCCCCccccch
Confidence 578888899999863 467665544221 1 234566676666666 3 5799999999999742 11
Q ss_pred -----hHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---Ccccccc
Q 018955 136 -----AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNL 207 (348)
Q Consensus 136 -----~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~ 207 (348)
.+.+..+.+..|++ +++.++-.-| +++. +++ .- ...+..+++.|.+.+ |=+++..
T Consensus 145 ~~~~G~~~i~~af~~Ar~~------dP~a~L~~Nd-yn~e---~~~---~k----~~~~~~~v~~l~~~GvpidgiG~Q~ 207 (327)
T 3u7b_A 145 LRVIGEAYIPIAFRMALAA------DPTTKLYYND-YNLE---YGN---AK----TEGAKRIARLVKSYGLRIDGIGLQA 207 (327)
T ss_dssp HHHHCTTHHHHHHHHHHHH------CTTSEEEEEE-SSCT---TCS---HH----HHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred hhhccHHHHHHHHHHHHhH------CCCCeEEecc-cccc---CCc---hh----hHHHHHHHHHHHHCCCCcceEEEcc
Confidence 23333444444443 2335555443 1110 110 00 112345666665544 3344444
Q ss_pred cccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHH
Q 018955 208 YPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNA 287 (348)
Q Consensus 208 yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na 287 (348)
|-.-+... ...+. +.+ ++.+..+|+++.--+++|.|||.+=+...... ..+.+.|
T Consensus 208 H~~~~~~~-----------------~~~~~--~p~-----~~~~~~~l~~~a~lGl~v~iTElDv~~~~p~~-~~~~~~Q 262 (327)
T 3u7b_A 208 HMTSESTP-----------------TQNTP--TPS-----RAKLASVLQGLADLGVDVAYTELDIRMNTPAT-QQKLQTN 262 (327)
T ss_dssp EEESSCCS-----------------SCCSC--CCC-----HHHHHHHHHHHHTTTCEEEEEEEEEEEESSCC-HHHHHHH
T ss_pred cccccccc-----------------cccCC--CCC-----HHHHHHHHHHHHhcCCceEEEecccccCCCCC-HHHHHHH
Confidence 43211100 00000 001 11222333433345689999998766421111 1335677
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCccEEEEEeecC-CCCCC-CCCCCceeeecCCCCeeee
Q 018955 288 RTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 288 ~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~ 344 (348)
+.+++.+++.+.+ .|. -..+.+...-|. .|+++ -..+.+-+||+.|.+||..
T Consensus 263 a~~y~~~~~~~~~----~~~-v~gIt~WG~~D~~sW~~~~f~~~~~~lLfD~~~~pKpA 316 (327)
T 3u7b_A 263 ADAYARIVGSCMD----VKR-CVGITVWGISDKYSWVPGTFPGEGSALLWNDNFQKKPS 316 (327)
T ss_dssp HHHHHHHHHHHHH----CTT-EEEEEESCSBGGGCSHHHHSTTEECCSSBCTTSCBCHH
T ss_pred HHHHHHHHHHHHh----CCC-ceEEEEEccCcCCcccCCcCCCCCCCCCCCCCCCCCHH
Confidence 8888988887742 232 223445555565 57653 1235578999999999964
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=1.6 Score=43.58 Aligned_cols=228 Identities=11% Similarity=0.106 Sum_probs=125.0
Q ss_pred CCCeeeEEecCCC--C-CC--CCHHHHHHHHhhCCC-CeEEE---------ecC-------------Ch-----------
Q 018955 31 TSAQIGVCYGMLG--N-NL--PSKRDVIALYNQNNI-RRMRL---------YDP-------------NR----------- 71 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~--~-~~--~s~~~v~~ll~~~~~-~~VRl---------Y~~-------------d~----------- 71 (348)
...++|+++.+.. + +. ++-.++++++|..+. ..||+ |.. ++
T Consensus 36 ~~~f~g~~~e~s~i~~~~~~~~~~~~v~~l~k~L~~~~~lR~GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~ 115 (488)
T 3vny_A 36 PPDYTGLSYEQAQMANPNYFSGANTQLAGFLRTLGRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREV 115 (488)
T ss_dssp CTTCCEEEEEGGGGGCTTTSSTTCHHHHHHHHHHCSSCEEEEESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEE
T ss_pred CccceEeeeeHhhccCccccCcCCHHHHHHHHHhCCCeEEEeCccccceEEEcCCCCCcccCcccccCcchhhccccCce
Confidence 5678888885432 2 11 233678999999899 99997 221 00
Q ss_pred -------HHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccc-cC-----C-Cc-ch
Q 018955 72 -------EALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEA-KP-----G-DN-FA 136 (348)
Q Consensus 72 -------~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~-l~-----~-~~-~~ 136 (348)
....-++..|.++++|+.... .+++++.+|++-...+-. +..|+.+-+|||+ ++ + +. ++
T Consensus 116 ~~~~~~def~~f~~~~G~~~~~~lN~g~-----~~~~~a~~~v~y~~~~~~-~~~l~~welGNEpd~~~~~G~~~~~~t~ 189 (488)
T 3vny_A 116 ITPEAVNNLSEFLDKTGWKLIYGLNLGK-----GTPENAADEAAYVMETIG-ADRLLAFQLGNEPDLFYRNGIRPASYDF 189 (488)
T ss_dssp ECHHHHHHHHHHHHHHCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHC-TTTEEEEEESSCGGGHHHHSSSCTTCCH
T ss_pred eCHHHHHHHHHHHHHhCCEEEEEEeCCC-----CCHHHHHHHHHHHhhccc-CCceeEEEecCcccccccCCccCCCCCH
Confidence 022334457999999999643 234566677763332111 2479999999996 33 1 11 45
Q ss_pred HHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCC
Q 018955 137 QYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGN 216 (348)
Q Consensus 137 ~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~ 216 (348)
++-....++..++++..- . .+++.-+... .+ ....+++++-.....|++..|.||. ....+
T Consensus 190 ~~Y~~~~~~~a~a~k~~~-p-~~~l~gp~~~------~~----------~~w~~~~l~~~~~~vd~vS~H~Y~~-g~~~~ 250 (488)
T 3vny_A 190 AAYAGDWQRFFTAIRKRV-P-NAPFAGPDTA------YN----------TKWLVPFADKFKHDVKFISSHYYAE-GPPTD 250 (488)
T ss_dssp HHHHHHHHHHHHHHHHHC-T-TCCEEEEEES------SC----------GGGHHHHHHHTGGGCSEEEEEEEEE-CCTTC
T ss_pred HHHHHHHHHHHHHHHhhC-C-CCeEEeCCCC------CC----------chhhHHHHHhcCccCCEEEEeeCCC-CCCCC
Confidence 555555555666666542 1 2443322210 01 1223445554556789999999983 10111
Q ss_pred CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC-CCCCCCHHHHHHHHHHHH
Q 018955 217 RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG-DGALTNVDNARTYNNNLI 295 (348)
Q Consensus 217 ~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~-~~~vas~~na~~y~~~~~ 295 (348)
+...++- +. + .+..++..++.+..+.+. +++|++++||+--+.|+ ++...+-.++=-+.+.+.
T Consensus 251 ~~~t~~~-ll--------~----~~~~l~~~~~~~~~~~~~---~g~p~~lgEtnsa~~~G~~~vs~tf~aalw~~D~~~ 314 (488)
T 3vny_A 251 PSMTIER-LM--------K----PNPRLLGETAGLKQVEAD---TGLPFRLTETNSCYQGGKQGVSDTFAAALWAGDLMY 314 (488)
T ss_dssp TTCCHHH-HT--------S----CCHHHHHHHHHHHHHHHH---HCCCEEEEEEEEESTTCCTTTTTSTHHHHHHHHHHH
T ss_pred CCcCHHH-Hc--------C----chHHHHHHHHHHHHHHhc---CCCCEEEeccccCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 1111110 10 1 112344445555444443 35699999999988765 442234445555555555
Q ss_pred HHHH
Q 018955 296 QHVK 299 (348)
Q Consensus 296 ~~~~ 299 (348)
..++
T Consensus 315 ~~a~ 318 (488)
T 3vny_A 315 QQAA 318 (488)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=94.30 E-value=1.1 Score=45.78 Aligned_cols=216 Identities=19% Similarity=0.225 Sum_probs=126.0
Q ss_pred HHHHHHHhhCCCCeEEEe-cCChHHH------------HHHhc-CC-CEEEEecCCC-chhhhhhcHHHHHHHHHhhccc
Q 018955 50 RDVIALYNQNNIRRMRLY-DPNREAL------------EALRG-SN-IEVMLGLPNN-DLRRIASNQAEANTWVQNNVRN 113 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY-~~d~~vl------------~A~~~-~g-lkV~lGv~~~-~~~~~a~~~~~a~~wv~~~v~~ 113 (348)
++..+++...++..=|-| +.-.... .+.++ .+ =.++++-+.. +-..+....+++.+|..+-+..
T Consensus 54 ~d~~~~~~~~~~~~GR~f~g~~~~~~~~d~~~~~ypd~~~~~~~~~~~~~v~t~hP~~~~~~w~~~~~a~a~~~a~~~~~ 133 (591)
T 4aw7_A 54 KDVGKFLADYQVGLGRKFWGPYSYAYNKTHEVGKYPQMKPYSGNISVKRYIATEHPYVQHIQGGIDVQAAGAWSAEYYSN 133 (591)
T ss_dssp HHHHHHHHHHTCEECEEECSHHHHHHHHHCSTTCCCCCCCCCSCCEEEEEEEECCCCTTTCCTTCCHHHHHHHHHHHHHT
T ss_pred cchhhhhhhcCceeccccCCccchhcccCCCCCCCCChhHHhhccCcCcEEEccCCchhhhhhhhhHHHHHHHHHHHhcc
Confidence 667778888888877874 3211111 01111 11 1255555543 2223444566777776666552
Q ss_pred cCCCceEEEEEecccccCC--C-----c---chHHHHHHHHHHHHHHHHcC-CCCceEEeeeeeccccccccCCCCccc-
Q 018955 114 FANNVKFKYIAVGNEAKPG--D-----N---FAQYLVPAMRNIQNAINAAG-LGNQIKVSTAIETGALGESFPPSRGSF- 181 (348)
Q Consensus 114 ~~~~~~I~~I~VGNE~l~~--~-----~---~~~~Ll~~i~~v~~~L~~~g-l~~~I~VsT~~~~~~~~~s~pPs~~~f- 181 (348)
...+.+..=|=||+... . + ...++.+.-+.+-+++++.. +..+|+|+=.-+ +| | .|
T Consensus 134 --~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVGGpas--A~----p----~~e 201 (591)
T 4aw7_A 134 --SELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVIGYAA--AY----P----AWE 201 (591)
T ss_dssp --CSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEEEEEE--SC----C----CTT
T ss_pred --CCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEecccc--cc----c----ccc
Confidence 35778999999999843 2 1 35678888888888888764 545688885432 12 1 12
Q ss_pred ccCccchhhHHHHHHh---hcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHH-HH
Q 018955 182 KQDYRPILDPLIRFLN---ENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAAL-EK 257 (348)
Q Consensus 182 ~~d~~~~~~~~l~fL~---~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~-~~ 257 (348)
..|+......+..|+. ..-|+++.|.|.+. .. +++ .... | .-++|.+|.+.+.. .+
T Consensus 202 ~~nF~~W~~~~k~Fmd~ag~~mDf~S~H~Yd~~-~~-~~~-------------~~rs-G----sn~EA~LDmie~Ys~~k 261 (591)
T 4aw7_A 202 DGNFNYWNTRMKMFIDRAGAYMDGFSVHLYDGI-VT-GTD-------------TKRS-G----SNSEAVLDMVEAYSYIK 261 (591)
T ss_dssp TTTTHHHHHTHHHHHHHHGGGCSEEEEEEEEEC--------------------CCCT-T----HHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHHhcCCCcCEEEEeecCCc-cc-CCC-------------cccc-C----ccHhHHHHHHHHHHHHH
Confidence 1222223333444444 36699999999986 22 110 0111 1 45688888887776 57
Q ss_pred hCCCCccEEEeeec-----cCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018955 258 TGGGSLGIVISESG-----WPTAGGDGALTNVDNARTYNNNLIQHVK 299 (348)
Q Consensus 258 ~g~~~~~v~I~ETG-----WPS~G~~~~vas~~na~~y~~~~~~~~~ 299 (348)
.| .-||++|+|.| ||..+-.. .-+...-+.|+.-+++.+.
T Consensus 262 ~G-~vKP~~ISEYG~~~~~~~~~~ys~-~~~~~~l~s~N~~lm~fMd 306 (591)
T 4aw7_A 262 FG-HVKPLAISEFGGIDNSKPDDSYDD-ISSVRSVSSFNHFLFNLME 306 (591)
T ss_dssp HS-SCCCEEEEEEEEECC-CCSCBCCT-TTTTTHHHHHHHHHHHHHT
T ss_pred hC-CCcceEEeccCCccCCCCCCCCch-hHhHHHHHHHHHHHHHHhc
Confidence 77 57899999987 55322111 1333556788888888885
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=94.13 E-value=1.5 Score=44.44 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=47.4
Q ss_pred CCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHh--cCCCCCCCCccEEEEE-eec-CCCCCCCCCCCce-eee
Q 018955 261 GSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKR--GSPKRPGRPIETYIFA-MFD-ENGKTGPEIERHW-GLF 335 (348)
Q Consensus 261 ~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~--gtp~~~~~~~~~f~F~-~fD-e~wK~~~~~E~~w-Gl~ 335 (348)
-+++|.|||.+...... . .+.+.|+.+++.+++.+.+ .+..++ .+.-+.+. +-| ..|+++ ..+ +||
T Consensus 441 ~Gl~i~iTElDi~~~~~-~--~~~~~QA~~y~~~~~~~~~~~~~~~~~--~v~git~WG~~D~~sW~~~----~~~plLf 511 (540)
T 2w5f_A 441 IGCDVQITELDISTENG-K--FSLQQQADKYKAVFQAAVDINRTSSKG--KVTAVCVWGPNDANTWLGS----QNAPLLF 511 (540)
T ss_dssp TTSEEEEEEEEEECTTT-T--SCHHHHHHHHHHHHHHHHHHHHHCCSS--CEEEEEESSSSTTSCTTCG----GGCCSSB
T ss_pred cCCcEEEEeeeecCCCC-C--chHHHHHHHHHHHHHHHHhhhccccCC--ceeEEEEEcCCCCCcccCC----CCceeeE
Confidence 46799999999986532 2 4677888888998887631 000112 34444444 333 357642 123 699
Q ss_pred cCCCCeeeec
Q 018955 336 APTRQPRYQI 345 (348)
Q Consensus 336 ~~d~~~ky~l 345 (348)
+.|++||...
T Consensus 512 d~~~~pKpAy 521 (540)
T 2w5f_A 512 NANNQPKPAY 521 (540)
T ss_dssp CTTSCBCHHH
T ss_pred CCCCCCCHHH
Confidence 9999999643
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=93.66 E-value=0.12 Score=53.95 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=66.8
Q ss_pred CCeeeEEecCCCCCCCC--HHHHHHHHhhCCCCeEEEec-C------C---------hHHHHHHhcCCCEEEEecCCCch
Q 018955 32 SAQIGVCYGMLGNNLPS--KRDVIALYNQNNIRRMRLYD-P------N---------REALEALRGSNIEVMLGLPNNDL 93 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s--~~~v~~ll~~~~~~~VRlY~-~------d---------~~vl~A~~~~glkV~lGv~~~~~ 93 (348)
.-.+|.||-|-+- |. -++.++++|..|++.||++- . . ..++..+.+.||+|+|++.....
T Consensus 8 ~~~~G~~y~pe~w--~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~~ld~~i~~~~~~Gi~vil~~~~~~~ 85 (675)
T 3tty_A 8 KIWYGGDYNPEQW--DKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFTWLDDIIERLTKENIYLCLATSTGAH 85 (675)
T ss_dssp SCEEEEECCGGGS--CHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred CceEeeeCChhhC--CHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCCccCHHHHHHHHHHHHHCCCEEEEeCCCCCC
Confidence 4467999988763 32 25678899999999999963 1 1 26899999999999999875332
Q ss_pred hhhh------------------------------hcHHHHHHHHHhhccccCCCceEEEEEeccccc
Q 018955 94 RRIA------------------------------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 94 ~~~a------------------------------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+... .-.+...+++++-+..|.....|.+..|+||.-
T Consensus 86 P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~NE~g 152 (675)
T 3tty_A 86 PAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVSNEYG 152 (675)
T ss_dssp CHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECSSSCC
T ss_pred ChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEccccC
Confidence 2110 012445555655555564444799999999985
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=93.34 E-value=1.4 Score=41.98 Aligned_cols=249 Identities=14% Similarity=0.106 Sum_probs=129.0
Q ss_pred CCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEE-ecC--------------C--hHHHHHHhcCCCEEEEe--cCCCc
Q 018955 32 SAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRL-YDP--------------N--REALEALRGSNIEVMLG--LPNND 92 (348)
Q Consensus 32 ~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRl-Y~~--------------d--~~vl~A~~~~glkV~lG--v~~~~ 92 (348)
.=.+|.|..+.. +.+ + .+++++. |+.|.. -+. . ..++.-+++.||+|... ||...
T Consensus 14 ~F~~G~av~~~~--l~~--~-~~~~~~~-Fn~~t~eN~mKW~~iep~~G~~~f~~~D~~v~~a~~~gi~vrgHtLvWh~q 87 (331)
T 3emz_A 14 SFKIGAAVHTRM--LQT--E-GEFIAKH-YNSVTAENQMKFEEVHPREHEYTFEAADEIVDFAVARGIGVRGHTLVWHNQ 87 (331)
T ss_dssp TCEEEEEECHHH--HHH--H-HHHHHHH-CSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEECCSBCSSS
T ss_pred CCeEEEEcChhh--cCc--H-HHHHHHh-CCEEEECcccchhhhcCCCCccChhHHHHHHHHHHHCCCEEeeeeeecccc
Confidence 345677776543 211 1 5556544 777776 111 1 36778888999998654 67655
Q ss_pred hhhhhh--------c----HHHHHHHHHhhccccCCCceEEEEEecccccCCC-------cc------hHHHHHHHHHHH
Q 018955 93 LRRIAS--------N----QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-------NF------AQYLVPAMRNIQ 147 (348)
Q Consensus 93 ~~~~a~--------~----~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-------~~------~~~Ll~~i~~v~ 147 (348)
.+..-. + .+...++|++-+..| + .+|..--|.||++... .. .+.+..+.+..|
T Consensus 88 ~P~W~~~~~~g~~~~~~~l~~~~~~~I~~v~~rY-k-g~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar 165 (331)
T 3emz_A 88 TPAWMFEDASGGTASREMMLSRLKQHIDTVVGRY-K-DQIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAH 165 (331)
T ss_dssp CCGGGGBCTTSSBCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHH
T ss_pred CcHhHhccccCCCCCHHHHHHHHHHHHHHHHHHh-C-CCceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHHHHH
Confidence 544321 1 234456666656665 3 5899999999998632 11 233444444454
Q ss_pred HHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcC---CcccccccccccccCCCCCCcccc
Q 018955 148 NAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENR---SPLLLNLYPYFAIAGNRQISLDYA 224 (348)
Q Consensus 148 ~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~---d~~~vN~yPff~~~~~~~i~~~~a 224 (348)
++ +++.++-.-| |......- ...+..+++.|.+.+ |=+++..| |...
T Consensus 166 ~a------dP~a~L~~ND--------yn~~~~~k----~~~~~~~v~~l~~~GvpidgiG~Q~H--~~~~---------- 215 (331)
T 3emz_A 166 EA------DPNALLFYND--------YNETDPVK----REKIYNLVRSLLDQGAPVHGIGMQGH--WNIH---------- 215 (331)
T ss_dssp HH------CTTSEEEEEE--------SSCSSHHH----HHHHHHHHHHHHHHTCCCCEEEECCE--EETT----------
T ss_pred hh------CCCceEEecc--------ccccChHH----HHHHHHHHHHHHHCCCccceEEECce--ecCC----------
Confidence 43 2334544333 11110000 112234555554443 33333322 1110
Q ss_pred ccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCC-----CC--CCCCCCH---HHHHHHHHHH
Q 018955 225 LFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTA-----GG--DGALTNV---DNARTYNNNL 294 (348)
Q Consensus 225 ~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~-----G~--~~~vas~---~na~~y~~~~ 294 (348)
+.+ .+.+..+|+++.--+++|.|||..=... +. .+ ++. +.|+.+++.+
T Consensus 216 ---------------~p~-----~~~~~~~l~~~a~lGl~v~iTElDi~~~~~~~~~~~~~~--~t~~~~~~Qa~~y~~~ 273 (331)
T 3emz_A 216 ---------------GPS-----MDEIRQAIERYASLDVQLHVTELDLSVFRHEDQRTDLTE--PTAEMAELQQKRYEDI 273 (331)
T ss_dssp ---------------BSC-----HHHHHHHHHHHHTTSCEEEEEEEEEESSCTTCCCCCCSS--CCHHHHHHHHHHHHHH
T ss_pred ---------------CCC-----HHHHHHHHHHHHHcCCcEEEeecccCCccccccccccCC--CCHHHHHHHHHHHHHH
Confidence 001 1122233344434568999999654332 11 12 454 4577788888
Q ss_pred HHHHHhcCCCCCCCCccEEEEE-eecC-CCCCC-C--CCCCceeeecCCCCeeeec
Q 018955 295 IQHVKRGSPKRPGRPIETYIFA-MFDE-NGKTG-P--EIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 295 ~~~~~~gtp~~~~~~~~~f~F~-~fDe-~wK~~-~--~~E~~wGl~~~d~~~ky~l 345 (348)
++.+.+- .+ .+.-+.+. .-|. .|+++ + +.+.+-+||+.|.+||...
T Consensus 274 ~~~~~~~---~~--~v~giT~WG~~D~~sW~~~~p~~g~~~~pllfd~~~~pKpAy 324 (331)
T 3emz_A 274 FGLFREY---RS--NITSVTFWGVADNYTWLDNFPVRGRKNWPFVFDTELQPKDSF 324 (331)
T ss_dssp HHHHHHT---TT--TEEEEEESSSSTTCCGGGSSSSTTCCCCCSSBCTTSCBCHHH
T ss_pred HHHHHhc---CC--CeeEEEEECCCCCCccCCCCCCCCCCCCCCCcCCCcCCCHHH
Confidence 8877421 12 34334444 4443 57764 1 2356778999999999643
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=92.77 E-value=1.5 Score=43.96 Aligned_cols=141 Identities=21% Similarity=0.232 Sum_probs=85.6
Q ss_pred HHHHHHHHhhCCCCeEEE--------ec------------------------CC----hHHHHHHhcCCCEEEEecCCCc
Q 018955 49 KRDVIALYNQNNIRRMRL--------YD------------------------PN----REALEALRGSNIEVMLGLPNND 92 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRl--------Y~------------------------~d----~~vl~A~~~~glkV~lGv~~~~ 92 (348)
+.+++++||..++..||. |. ++ ...++-+...|.+.+++++...
T Consensus 53 R~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~e~n~fG~~Ef~~~~~~~gaep~~~vn~g~ 132 (496)
T 2vrq_A 53 RNDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHFGTHEFMMLCELLGCEPYISGNVGS 132 (496)
T ss_dssp EHHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEETTTTSEECCCCSCHHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccCCCCCcccccCccCHHHHHHHHHHcCCeEEEEEECCC
Confidence 478999999999999997 21 00 2456778889999999999742
Q ss_pred hhhhhhcHHHHHHHHHhhccc-------------cCCCceEEEEEecccccCC-Cc-chHHHHHHHHHHHHHHHHcCCCC
Q 018955 93 LRRIASNQAEANTWVQNNVRN-------------FANNVKFKYIAVGNEAKPG-DN-FAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 93 ~~~~a~~~~~a~~wv~~~v~~-------------~~~~~~I~~I~VGNE~l~~-~~-~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
..++++.+||.=.-.+ +-.+-.|+++-||||.--. +. ++++-....+...+++++.. ++
T Consensus 133 -----g~~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiGNE~~g~~g~~~~~~Y~~~~~~~a~a~k~~~-dp 206 (496)
T 2vrq_A 133 -----GTVQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNQNWGCGGNMRAEYYADLYRQFQTYLRNYG-DN 206 (496)
T ss_dssp -----CCHHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEECSCTTTTTTCCCHHHHHHHHHHHHHTCCCCT-TC
T ss_pred -----CcHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEcCcccccCCCCCHHHHHHHHHHHHHHHHhCC-CC
Confidence 1345566666421100 0012369999999998432 22 45555555566666666542 23
Q ss_pred ceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCccccccccc
Q 018955 158 QIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPY 210 (348)
Q Consensus 158 ~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPf 210 (348)
+|++-..-. + ..+ ......+++.+.+..|++..|.|+.
T Consensus 207 ~i~~ia~G~----------~----~~~-~~W~~~~l~~~~~~~D~vs~H~Y~~ 244 (496)
T 2vrq_A 207 KLHKIACGA----------N----TAD-YHWTEVLMKQAAPFMHGLSLHYYTV 244 (496)
T ss_dssp CCEEEEEEE----------E----TTC-HHHHHHHHHHHGGGCSEEEEEEEEC
T ss_pred CeEEEEeCC----------C----CCC-cchHHHHHHhCCCCCCEEEEeecCC
Confidence 465532110 0 000 1234556666767799999999964
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=92.13 E-value=1.9 Score=41.03 Aligned_cols=261 Identities=15% Similarity=0.080 Sum_probs=135.7
Q ss_pred eeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe------cC---------C--hHHHHHHhcCCCEEEE--ecCCCchh
Q 018955 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY------DP---------N--REALEALRGSNIEVML--GLPNNDLR 94 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY------~~---------d--~~vl~A~~~~glkV~l--Gv~~~~~~ 94 (348)
.+|.+-.+..-...+-.+..+++++. |+.+..= .. . ..++.-++..||+|.- -||....+
T Consensus 15 ~fG~A~~~~~~~~~~~~~y~~~~~~~-Fn~~t~eN~mKW~~~ep~~G~~~f~~aD~~v~~a~~~gi~vrGHtLvWh~q~P 93 (335)
T 4f8x_A 15 WFGTAADIPGTAETTDAAYLKVLKQN-FGEITPANAMKFMYTETEQNVFNFTEGEQFLEVAERFGSKVRCHNLVWASQVS 93 (335)
T ss_dssp EEEEEECTTTSGGGGCHHHHHHHHHH-CSEEEESSTTSGGGTEEETTEECCHHHHHHHHHHHHTTCEEEEEEEECSSSCC
T ss_pred eEEEEecCccccccCCHHHHHHHHHh-CCEEEECCccchHHhCCCCCccCcchhHHHHHHHHHCCCEEEEeeecccccCc
Confidence 57888776521111123344555543 5555541 11 1 2577888889998863 46876555
Q ss_pred hhhh----c----HHHHHHHHHhhccccCCCceEEEEEecccccCCC-----c------chHHHHHHHHHHHHHHHHcCC
Q 018955 95 RIAS----N----QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----N------FAQYLVPAMRNIQNAINAAGL 155 (348)
Q Consensus 95 ~~a~----~----~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~------~~~~Ll~~i~~v~~~L~~~gl 155 (348)
..-. + .+...++|++-+..| ..+|..--|.||++..+ . -.+.+..+.+..|+++...+-
T Consensus 94 ~W~~~~~~~~~~l~~~~~~~I~~v~~rY--~g~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~d 171 (335)
T 4f8x_A 94 DFVTSKTWTAKELTAVMKNHIFKTVQHF--GRRCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGA 171 (335)
T ss_dssp HHHHTSCCCHHHHHHHHHHHHHHHHHHH--GGGCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHh--CCCceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCC
Confidence 4322 1 244566676666666 35799999999999642 1 135667777888888766553
Q ss_pred CCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCc---ccccccccccccCCCCCCccccccccCCce
Q 018955 156 GNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSP---LLLNLYPYFAIAGNRQISLDYALFRSQQTV 232 (348)
Q Consensus 156 ~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~---~~vN~yPff~~~~~~~i~~~~a~f~~~~~~ 232 (348)
++.++-.-| +++. .+. .- ...+..+++.|.+.+=+ +++-.| |...
T Consensus 172 -P~a~L~~ND-Yn~e---~~~---~k----~~~~~~lv~~l~~~gvpidgiG~Q~H--~~~~------------------ 219 (335)
T 4f8x_A 172 -NDVKLYYND-YGIE---NPG---TK----STAVLQLVSNLRKRGIRIDGVGLESH--FIVG------------------ 219 (335)
T ss_dssp -TTSEEEEEE-SSCS---SSS---HH----HHHHHHHHHHHHHTTCCCCEEEECCE--EETT------------------
T ss_pred -CCcEEEEec-cccc---CCc---Hh----HHHHHHHHHHHHHCCCCcceeeeeee--ecCC------------------
Confidence 346655443 1111 110 00 12344566666554322 222222 1100
Q ss_pred eccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCC-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCc-
Q 018955 233 VSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDG-ALTNVDNARTYNNNLIQHVKRGSPKRPGRPI- 310 (348)
Q Consensus 233 ~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~-~vas~~na~~y~~~~~~~~~~gtp~~~~~~~- 310 (348)
.... . .-+.+.++. +.. -+++|.|||..=.....+. .....+.|+.+++.++..+.+ .+. .+
T Consensus 220 -~~p~--~-~~~~~~l~~----~a~---lGl~v~iTElDi~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~----~~~-~v~ 283 (335)
T 4f8x_A 220 -ETPS--L-ADQLATKQA----YIK---ANLDVAVTELDVRFSTVPYYTAAAQKQQAEDYYVSVASCMN----AGP-RCI 283 (335)
T ss_dssp -CCCC--H-HHHHHHHHH----HHH---TTCEEEEEEEEEEBSSSCCSSHHHHHHHHHHHHHHHHHHHH----TCT-TEE
T ss_pred -CCCC--H-HHHHHHHHH----HHH---cCCeeEEeeccccccCCCCCCHHHHHHHHHHHHHHHHHHHh----CcC-Cee
Confidence 0000 0 111122222 233 3579999997665432111 002345667788888877642 221 23
Q ss_pred cEEEEEeecC-CCCCC-CCCCCceeeecCCCCeeeec
Q 018955 311 ETYIFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 311 ~~f~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~l 345 (348)
.+-+...-|. .|.++ -..+.+-+||+.|.+||...
T Consensus 284 git~WG~~D~~sW~~~~~p~~~~plLfd~~~~pKpAy 320 (335)
T 4f8x_A 284 GVVVWDFDDAYSWVPSAFAGQGGACLFNNTLEAKPAY 320 (335)
T ss_dssp EEEESCSBGGGCSHHHHSTTCBCCSSBCTTCCBCHHH
T ss_pred EEEEEcCccCCccCCCCCCCCCCCccCCCCCCCCHHH
Confidence 3334445554 47642 11245678999999999643
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=90.80 E-value=0.62 Score=46.77 Aligned_cols=73 Identities=14% Similarity=0.224 Sum_probs=46.1
Q ss_pred CCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHH-HhcCCCCCCCCccEEEEEeecC-CCCCCCCCCCceeeecC
Q 018955 260 GGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHV-KRGSPKRPGRPIETYIFAMFDE-NGKTGPEIERHWGLFAP 337 (348)
Q Consensus 260 ~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~-~~gtp~~~~~~~~~f~F~~fDe-~wK~~~~~E~~wGl~~~ 337 (348)
++++||+|+|.|+...|.....-=.+--+.+.+.+.+.+ +.|.+.+ .||.-++.|- +|.. +..+.|||++-
T Consensus 374 Y~~~Pi~ITENG~~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~v~-----GY~~WSl~DnfeW~~--Gy~~RfGlvyV 446 (487)
T 3vii_A 374 YNNPPVFITENGFSDYGGLNDTGRVHYYTEHLKEMLKAIHEDGVNVI-----GYTAWSLMDNFEWLR--GYSEKFGIYAV 446 (487)
T ss_dssp HTSCCEEEEECCCCBSSCSCCHHHHHHHHHHHHHHHHHHHTTCCCEE-----EEEEECSBCCCCGGG--TTSSBCCSEEE
T ss_pred cCCCCEEEecCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHcCCeEE-----EEEEeeccccchhhc--ccccccCeEEE
Confidence 456799999999986654110012344556666666666 4565543 4777777772 2433 48899999987
Q ss_pred CC
Q 018955 338 TR 339 (348)
Q Consensus 338 d~ 339 (348)
|.
T Consensus 447 D~ 448 (487)
T 3vii_A 447 DF 448 (487)
T ss_dssp CT
T ss_pred cC
Confidence 64
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=90.11 E-value=1.6 Score=43.31 Aligned_cols=79 Identities=25% Similarity=0.325 Sum_probs=51.1
Q ss_pred HHHHHHHhhCCCCeEEEecC------------C-------hHHHHHHhcCCCEEEEecCCCchhh-hh-----hcHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYDP------------N-------REALEALRGSNIEVMLGLPNNDLRR-IA-----SNQAEAN 104 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~------------d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a-----~~~~~a~ 104 (348)
+|+++|++..|++..|+=-+ + .+++..|.+.||+.++.+..-++|. +. .+++.+.
T Consensus 69 ~eDi~Lm~elG~~~yRfSIsWsRI~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H~dlP~~L~~~GGW~nr~~v~ 148 (458)
T 3ta9_A 69 REDIELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQDKGGWTNRDTAK 148 (458)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCcHHHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHhHHhcCCCCCHHHHH
Confidence 67899999999999997411 2 3689999999999999998655443 22 1222222
Q ss_pred HHH---HhhccccCCCceEEEEEeccccc
Q 018955 105 TWV---QNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 105 ~wv---~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
... +.-...| +++|+.-+.=||+.
T Consensus 149 ~F~~YA~~~f~~f--gdrVk~W~T~NEP~ 175 (458)
T 3ta9_A 149 YFAEYARLMFEEF--NGLVDLWVTHNEPW 175 (458)
T ss_dssp HHHHHHHHHHHHT--TTTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHh--cCcCCEEEEecCcc
Confidence 211 1112233 35788877778864
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=88.53 E-value=2.6 Score=46.03 Aligned_cols=95 Identities=18% Similarity=0.052 Sum_probs=61.3
Q ss_pred eeeEEecCCCC---CCCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCC-----------chh
Q 018955 34 QIGVCYGMLGN---NLPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNN-----------DLR 94 (348)
Q Consensus 34 ~~Gi~Y~~~~~---~~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~-----------~~~ 94 (348)
..|+||-+... ...+.+. .++++|+.|++.||+..- ++..+..|...||.|+..++.. +.+
T Consensus 351 lrGvn~h~~~p~~G~~~~~e~~~~dl~lmK~~g~N~vR~~hyp~~~~~~dlcDe~Gi~V~~E~~~~~~g~~~~~~~~~~p 430 (1023)
T 1jz7_A 351 IRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDP 430 (1023)
T ss_dssp EEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCEEEEECSCBCTTSSSTTTTTTCG
T ss_pred EEEeeccccCcccccCCCHHHHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCEEEECCCcccCCccccCcCCCCH
Confidence 56999865432 1245544 467899999999999643 4689999999999999876431 111
Q ss_pred hhhhcHHHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 95 ~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
.. .+...+-+++.|.++...-.|..=.+|||.-.
T Consensus 431 ~~---~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~ 464 (1023)
T 1jz7_A 431 RW---LPAMSERVTRMVQRDRNHPSVIIWSLGNESGH 464 (1023)
T ss_dssp GG---HHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC
T ss_pred HH---HHHHHHHHHHHHHHhCCCCEEEEEECccCCcc
Confidence 11 12222334455555433335778899999864
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=88.28 E-value=0.81 Score=45.26 Aligned_cols=49 Identities=8% Similarity=0.106 Sum_probs=40.1
Q ss_pred CceEEEEEecccccCCC--c----chHHHHHHHH-HHHHHHHHcCCCCceEEeeeee
Q 018955 117 NVKFKYIAVGNEAKPGD--N----FAQYLVPAMR-NIQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 117 ~~~I~~I~VGNE~l~~~--~----~~~~Ll~~i~-~v~~~L~~~gl~~~I~VsT~~~ 166 (348)
+-.|.+|.+.||+.... + ++++....|+ .++.+|++.|+.+ ++|-..|.
T Consensus 185 Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~-~kI~~~D~ 240 (447)
T 2wnw_A 185 GINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDE-MEIYIWDH 240 (447)
T ss_dssp TCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTT-CEEEEEEE
T ss_pred CCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCC-ceEEEeCC
Confidence 56799999999999753 1 5888999998 8999999999964 77776664
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=87.42 E-value=21 Score=34.17 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=60.5
Q ss_pred HHHhh----CCCCeEEEe-cC-------ChHHHHHHhcCCCEEEEecCCCc-----hh------hhh-hcHHHHHHHHHh
Q 018955 54 ALYNQ----NNIRRMRLY-DP-------NREALEALRGSNIEVMLGLPNND-----LR------RIA-SNQAEANTWVQN 109 (348)
Q Consensus 54 ~ll~~----~~~~~VRlY-~~-------d~~vl~A~~~~glkV~lGv~~~~-----~~------~~a-~~~~~a~~wv~~ 109 (348)
.+... .|++.+|+- +. +-.+++.+++.|++|+..-|.-- .. .+. ...++-.+.+.+
T Consensus 36 ~lF~~~~G~~g~s~~R~~ig~~~~~~~~~~~~~k~A~~~~~~i~aspWSpP~wMk~n~~~~~~g~L~~~~~~~yA~Yl~k 115 (383)
T 2y24_A 36 TAYGSGVGQIGLSIMRVRIDPDSSKWNIQLPSARQAVSLGAKIMATPWSPPAYMKSNNSLINGGRLLPANYSAYTSHLLD 115 (383)
T ss_dssp HHHCCSTTCCCCCEEEEEECSSGGGGGGGHHHHHHHHHTTCEEEEEESCCCGGGBTTSSSBSCCBBCGGGHHHHHHHHHH
T ss_pred cccCCCCCcccceEEEEecCCcccccccchHHHHHHHhcCCeEEEecCCCcHHHhCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 46654 468889885 22 23466666778999999887320 00 010 111211222333
Q ss_pred hccccC-CCceEEEEEecccccCCCc------chHHHHHHHHHHHHHHHHcCCCCceEEeeeee
Q 018955 110 NVRNFA-NNVKFKYIAVGNEAKPGDN------FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 110 ~v~~~~-~~~~I~~I~VGNE~l~~~~------~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~ 166 (348)
-|+.|. .+-.|.+|.+.||+..... +++++...|++.... +. +++|-..|+
T Consensus 116 ~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~-----~~-~~kI~~~d~ 173 (383)
T 2y24_A 116 FSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSK-----FG-SLKVIVAES 173 (383)
T ss_dssp HHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGG-----ST-TSEEEEEEE
T ss_pred HHHHHHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhh-----hc-CCEEEeecc
Confidence 333321 1456999999999997531 478888888865432 33 266665554
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=85.63 E-value=12 Score=34.34 Aligned_cols=219 Identities=15% Similarity=0.196 Sum_probs=108.5
Q ss_pred CCCCCCCCHHHHHHHHhhC--CCCeEEEec---CCh----HHHHHHhcCCCEEEEecCCC--chhhhhhcH--HHHHHHH
Q 018955 41 MLGNNLPSKRDVIALYNQN--NIRRMRLYD---PNR----EALEALRGSNIEVMLGLPNN--DLRRIASNQ--AEANTWV 107 (348)
Q Consensus 41 ~~~~~~~s~~~v~~ll~~~--~~~~VRlY~---~d~----~vl~A~~~~glkV~lGv~~~--~~~~~a~~~--~~a~~wv 107 (348)
.+-...|..+++..+-+.. ....+-+|. .+. ..++++.+.|--++|..... ....++... +.+.+ +
T Consensus 13 a~~g~~p~~~~~~~~~~~~G~~~~i~~~y~~w~~~~~~~~~~~~~~~~~G~i~~isw~P~~~~~~~i~~G~~d~~i~~-~ 91 (283)
T 2v3g_A 13 AWVGTQPSESAIKSFQELQGRKLDIVHQFINWSTDFSWVRPYADAVYNNGSILMITWEPWEYNTVDIKNGKADAYITR-M 91 (283)
T ss_dssp EECSSCCCHHHHHHHHHHHTSCCSEEEEEEETTCCHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHTTTTHHHHHH-H
T ss_pred eecCCCCCHHHHHHHHHHhCCCceEEEEecCCCCcchHHHHHHHHHHhCCCEEEEEeCCCCCCHHHhcCCchHHHHHH-H
Confidence 3333346666765544443 356666662 121 34445556776666665422 222222110 11111 2
Q ss_pred HhhccccCCCceEEEEEecccccCC----C-------cchHHHHHHHHHHHHHHHHcCCCCceEEeeeeec-----cccc
Q 018955 108 QNNVRNFANNVKFKYIAVGNEAKPG----D-------NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIET-----GALG 171 (348)
Q Consensus 108 ~~~v~~~~~~~~I~~I~VGNE~l~~----~-------~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~-----~~~~ 171 (348)
.+.+..+ +.. ..+-.+.|.=-. + ..++.-..+-+.+...|++.|++.-+-|=++... .-+.
T Consensus 92 A~~l~~~--g~p-V~~R~~hE~nG~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~vw~p~~~~~~~~~~~~ 168 (283)
T 2v3g_A 92 AQDMKAY--GKE-IWLRPLHEANGDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYL 168 (283)
T ss_dssp HHHHHHH--CSC-EEEEESCCTTSSSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSS
T ss_pred HHHHHhc--CCc-EEEEeccccCCCcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCccchh
Confidence 2233332 111 245556665321 1 1477889999999999999988752232222210 0111
Q ss_pred cccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHH
Q 018955 172 ESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251 (348)
Q Consensus 172 ~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~ 251 (348)
.-|| . .+-+|.+++.+|....... + +.. . .-|+.+++..
T Consensus 169 ~~YP--------G------------DdyVDivG~D~Y~~~~~~~----------~--------~~~--~-~~f~~~~~~~ 207 (283)
T 2v3g_A 169 GHYP--------G------------DNYVDYTSIDGYNWGTTQS----------W--------GSQ--W-QSFDQVFSRA 207 (283)
T ss_dssp TTCC--------C------------GGGCSBEEEEEEECTTCCT----------T--------TCC--C-CCHHHHHHHH
T ss_pred hhCC--------C------------CCEEEEEEEEccCCCCccc----------c--------cch--h-HhHHHHHHHH
Confidence 1222 0 1345999999998533210 0 000 0 1244455544
Q ss_pred HHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCC
Q 018955 252 YAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENG 322 (348)
Q Consensus 252 ~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~w 322 (348)
+..++ ..+|+|.|+|+|=-..| + ....+++.+...+.+. .| .++.+.-||.++
T Consensus 208 ~~~~~---~~~Kpi~i~E~G~~~~g--g------dk~~W~~~~~~~~~~~---~p----~~~~~~wfn~~~ 260 (283)
T 2v3g_A 208 YQALA---SINKPIIIAEFASAEIG--G------NKARWITEAYNSIRTS---YN----KVIAAVWFHENK 260 (283)
T ss_dssp HHHHT---TSSSCEEEEEEEECSTT--S------CHHHHHHHHHHHHHHH---CT----TEEEEEEECCBS
T ss_pred HHHHH---hCCCcEEEEeecCCCCC--C------chHHHHHHHHHHHHHh---CC----ceEEEEEccCCC
Confidence 44432 26899999999944322 2 1345777776665321 12 255666677653
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=85.59 E-value=7 Score=39.02 Aligned_cols=133 Identities=11% Similarity=0.069 Sum_probs=78.8
Q ss_pred CceEEEEEecccccCC------Cc----chHHHHHHHH-HHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCc
Q 018955 117 NVKFKYIAVGNEAKPG------DN----FAQYLVPAMR-NIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDY 185 (348)
Q Consensus 117 ~~~I~~I~VGNE~l~~------~~----~~~~Ll~~i~-~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~ 185 (348)
+-.|.+|.+-||+... .+ ++++....|+ .++.+|++.|+.+ ++|-..|....-..
T Consensus 224 Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L~~~gl~~-~kI~~~D~n~~~~~------------- 289 (497)
T 2nt0_A 224 KLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHN-VRLLMLDDQRLLLP------------- 289 (497)
T ss_dssp TCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTSTTTT-SEEEEEEEEGGGTT-------------
T ss_pred CCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcCCCC-ceEEEecCCCCcch-------------
Confidence 5679999999999873 11 5888999999 7999999999954 77777764211000
Q ss_pred cchhhHHHH--HHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCc
Q 018955 186 RPILDPLIR--FLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSL 263 (348)
Q Consensus 186 ~~~~~~~l~--fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~ 263 (348)
.....++. -..+..|-+.+|.|. .... + . ..+++.+. ++ +++|
T Consensus 290 -~~~~~~l~d~~a~~~v~~ia~H~Y~--~~~~---------------------~----~--~~~l~~~~---~~--~p~k 334 (497)
T 2nt0_A 290 -HWAKVVLTDPEAAKYVHGIAVHWYL--DFLA---------------------P----A--KATLGETH---RL--FPNT 334 (497)
T ss_dssp -HHHHHHHTSHHHHTTCCEEEEEEET--TSCC---------------------C----H--HHHHHHHH---HH--CTTS
T ss_pred -hHHHHHhcChhhHhhcceEEEEecC--CCCC---------------------C----h--HHHHHHHH---HH--CCCC
Confidence 11112221 133445666666664 2110 0 0 01122222 22 5899
Q ss_pred cEEEeeecc---CCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018955 264 GIVISESGW---PTAGGDGALTNVDNARTYNNNLIQHVK 299 (348)
Q Consensus 264 ~v~I~ETGW---PS~G~~~~vas~~na~~y~~~~~~~~~ 299 (348)
+++.||.+= +.....+ ..+-..+..|-+.++..++
T Consensus 335 ~lw~TE~~~~~~~~~~~~~-~~~w~~a~~~a~~ii~~l~ 372 (497)
T 2nt0_A 335 MLFASEACVGSKFWEQSVR-LGSWDRGMQYSHSIITNLL 372 (497)
T ss_dssp EEEEEEEECCCSTTSCSCC-TTCHHHHHHHHHHHHHHHH
T ss_pred cEEEecccCCCCCccCCCC-cCcHHHHHHHHHHHHHHHh
Confidence 999999752 2221122 1456777788888888775
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=84.79 E-value=12 Score=38.24 Aligned_cols=110 Identities=10% Similarity=0.061 Sum_probs=74.3
Q ss_pred HHHHHHHhhCCCCeEEEecC-----------------C-hHHHHHHhcCCCEEEEecC--------CCchhhhh------
Q 018955 50 RDVIALYNQNNIRRMRLYDP-----------------N-REALEALRGSNIEVMLGLP--------NNDLRRIA------ 97 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~-----------------d-~~vl~A~~~~glkV~lGv~--------~~~~~~~a------ 97 (348)
.+.++.+|..|++.||+|-. | ...|+.+++.||.|+|... +..++.+-
T Consensus 35 ~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p~~ 114 (595)
T 4e8d_A 35 YHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSPFICAEWEFGGLPAWLLTKNMR 114 (595)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSSSC
T ss_pred HHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecCCceecccCCCcCChhhccCCce
Confidence 56788999999999999833 1 3678889999999999811 11222111
Q ss_pred ------hcHHHHHHHHH---hhccccC--CCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeee
Q 018955 98 ------SNQAEANTWVQ---NNVRNFA--NNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAI 165 (348)
Q Consensus 98 ------~~~~~a~~wv~---~~v~~~~--~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~ 165 (348)
.-.++..+|+. ..+.++. .+..|..+-|-||.=.-+. =-.||+.+++.++++|+. ||.-|.+
T Consensus 115 lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~~----~~~Y~~~l~~~~~~~Gi~--vpl~t~d 187 (595)
T 4e8d_A 115 IRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYGE----DKAYLRAIRQLMEECGVT--CPLFTSD 187 (595)
T ss_dssp SSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTCC----CHHHHHHHHHHHHHTTCC--SCEEEEE
T ss_pred eccCCHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccCC----cHHHHHHHHHHHHHcCCc--EEEEEcc
Confidence 11345566644 3344432 2356889999999743221 247999999999999984 8888876
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=83.54 E-value=6.9 Score=39.10 Aligned_cols=48 Identities=19% Similarity=0.183 Sum_probs=38.9
Q ss_pred CceEEEEEecccc--cCC---C-c----chHHHHHHHHHHHHHHHHcCCCCceEEeeeee
Q 018955 117 NVKFKYIAVGNEA--KPG---D-N----FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 117 ~~~I~~I~VGNE~--l~~---~-~----~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~ 166 (348)
+-.|.+|.+.||+ .+. . + ++++....|+.++.+|++.|+. +||-..|+
T Consensus 175 Gi~i~~is~qNEP~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~--~kI~~~d~ 232 (507)
T 3clw_A 175 GFHVNYISPNNEPNGQWHANSFQEGSFATKADLYRMVEELDKAISEAQID--TKILIPEV 232 (507)
T ss_dssp TCCEEEEECCSCTTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCS--CEEEEEEE
T ss_pred CCceeEeeeecCCccccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCC--ceEEEecc
Confidence 5679999999999 763 1 1 6889999999999999999993 67666654
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=83.22 E-value=0.63 Score=46.63 Aligned_cols=68 Identities=10% Similarity=0.197 Sum_probs=44.7
Q ss_pred CccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecC-CCCCCCCCCCceeeecCCC
Q 018955 262 SLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDE-NGKTGPEIERHWGLFAPTR 339 (348)
Q Consensus 262 ~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe-~wK~~~~~E~~wGl~~~d~ 339 (348)
++||+|||.|+....+. -=+.--+.+.+.+.+.++.|.+.+ .||.-++.|- +|-. +..+.|||++-|.
T Consensus 379 ~~Pi~ITENG~~~~~D~---~Ri~Yl~~hl~~~~~Ai~dGv~v~-----GY~~WSl~Dn~EW~~--Gy~~RfGLv~VD~ 447 (481)
T 1qvb_A 379 GVDLIVTENGVSDSRDA---LRPAYLVSHVYSVWKAANEGIPVK-----GYLHWSLTDNYEWAQ--GFRQKFGLVMVDF 447 (481)
T ss_dssp CCEEEEEECCCCCTTCS---SHHHHHHHHHHHHHHHHHTTCCEE-----EEEEECSBCCCCGGG--TTSSCCCSEEEET
T ss_pred CCCEEEEeCCCCccccH---HHHHHHHHHHHHHHHHHHcCCCEE-----EEEeccccccccccC--CCCCCceEEEEeC
Confidence 35999999999865321 223445556666666665565543 4777777773 3543 4788999999874
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=83.10 E-value=0.46 Score=47.57 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=51.3
Q ss_pred HHHHHHHhhCCCCeEEEec----------C---C-------hHHHHHHhcCCCEEEEecCCCchhh-hh------hcHHH
Q 018955 50 RDVIALYNQNNIRRMRLYD----------P---N-------REALEALRGSNIEVMLGLPNNDLRR-IA------SNQAE 102 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~----------~---d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a------~~~~~ 102 (348)
++++++++..|++.+|+=- . + .+++..+.+.||+.++.+..-+++. +. .+++.
T Consensus 58 ~eDi~lm~~lG~~~~Rfsi~W~Ri~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H~dlP~~L~~~yGGW~nr~~ 137 (479)
T 4b3l_A 58 ESDLTLLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPIALYQAYGGWESKHV 137 (479)
T ss_dssp HHHHHHHHTTTCCEEEEECCHHHHBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCSSCCBHHHHHHHCGGGCHHH
T ss_pred HHHHHHHHHcCCCEEEeecCHHHhccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecCCCcCHHHHHhcCCcCCHHH
Confidence 6789999999999999741 1 1 2688999999999999998655443 21 12222
Q ss_pred HHHH---HHhhccccCCCceEEEEEeccccc
Q 018955 103 ANTW---VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 103 a~~w---v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+... .+.-...| +++|+.-+.=||+.
T Consensus 138 vd~F~~YA~~~f~~f--gdrVk~WiT~NEp~ 166 (479)
T 4b3l_A 138 VDLFVAFSKVCFEQF--GDRVKDWFVHNEPM 166 (479)
T ss_dssp HHHHHHHHHHHHHHH--TTTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHHHh--CccCCeEEEccCcc
Confidence 2211 11112233 46788888888864
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=81.65 E-value=6 Score=42.15 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=59.3
Q ss_pred eeeEEecCCCCC--CCCHHH---HHHHHhhCCCCeEEEec----CChHHHHHHhcCCCEEEEecCCCc-----hhhhhhc
Q 018955 34 QIGVCYGMLGNN--LPSKRD---VIALYNQNNIRRMRLYD----PNREALEALRGSNIEVMLGLPNND-----LRRIASN 99 (348)
Q Consensus 34 ~~Gi~Y~~~~~~--~~s~~~---v~~ll~~~~~~~VRlY~----~d~~vl~A~~~~glkV~lGv~~~~-----~~~~a~~ 99 (348)
..|+||-|...- .++.+. .++++|..|++.||+++ .++..+.+|...||-|+...+... .+.+.
T Consensus 334 l~G~n~~~~~~~~~~~~~~~~~~~l~~~k~~g~N~iR~wgg~~y~~~~~~d~cD~~GilV~~e~~~~~~~~~~~~~~~-- 411 (848)
T 2je8_A 334 AKGANYIPQDALLPNVTTERYQTLFRDMKEANMNMVRIWGGGTYENNLFYDLADENGILVWQDFMFACTPYPSDPTFL-- 411 (848)
T ss_dssp EEEEEECCSCSSGGGCCHHHHHHHHHHHHHTTCCEEEECTTSCCCCHHHHHHHHHHTCEEEEECSCBSSCCCCCHHHH--
T ss_pred EEeEeecCchhcccCCCHHHHHHHHHHHHHcCCcEEEeCCCccCCCHHHHHHHHHcCCEEEECcccccCCCCCCHHHH--
Confidence 469999874321 145544 46688899999999973 246899999999999999886421 12211
Q ss_pred HHHHHHHHHhhccccCCCceEEEEEeccccc
Q 018955 100 QAEANTWVQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 100 ~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+...+-+++.|.++..--.|..-.+|||..
T Consensus 412 -~~~~~~~~~~v~r~~nHPSii~W~~~NE~~ 441 (848)
T 2je8_A 412 -KRVEAEAVYNIRRLRNHASLAMWCGNNEIL 441 (848)
T ss_dssp -HHHHHHHHHHHHHHTTCTTEEEEESCBSHH
T ss_pred -HHHHHHHHHHHHHhcCCCcEEEEEccCCCc
Confidence 222222344444443223466779999984
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 348 | ||||
| d2cyga1 | 312 | c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( | 1e-130 | |
| d1aq0a_ | 306 | c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu | 1e-119 | |
| d1ghsa_ | 306 | c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu | 1e-118 |
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Score = 373 bits (958), Expect = e-130
Identities = 182/314 (57%), Positives = 241/314 (76%), Gaps = 3/314 (0%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYGMLGNNLP +V++LY NNI RMRLYDPN+ AL+ALR SNI+V+L +P +D++
Sbjct: 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
+ASN + A W++ NV + +V F+YIAVGNE PG + AQY++PAMRNI NA+++AG
Sbjct: 61 SLASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAG 120
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIA 214
L NQIKVSTA++TG LG S+PPS G+F + L P+++FL N +PLL+N+YPYF+
Sbjct: 121 LQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYT 180
Query: 215 GN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273
GN QISL YALF + VV DG SY++LFDAI+DAV+AALE+ GG ++ +V+SESGWP
Sbjct: 181 GNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240
Query: 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWG 333
+AGG GA + NA+TYN NLI+HV G+P+RPG+ IE YIF MF+EN K G IE+++G
Sbjct: 241 SAGG-GAEASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKAGG-IEQNFG 298
Query: 334 LFAPTRQPRYQINF 347
LF P +QP YQI+F
Sbjct: 299 LFYPNKQPVYQISF 312
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Score = 343 bits (882), Expect = e-119
Identities = 147/314 (46%), Positives = 203/314 (64%), Gaps = 9/314 (2%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYGM NNLP+ V++++ N I+ MRLY PN+ AL+A+ G+ I V++G PN+ L
Sbjct: 1 IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLS 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
+A++ A A +WV++N+ V F+Y+ VGNE + LVPAM+N+ A+ AAG
Sbjct: 61 NLAASPAAAASWVKSNI-QAYPKVSFRYVCVGNEVAG--GATRNLVPAMKNVHGALVAAG 117
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIA 214
LG IKV+T++ LG PPS GSF + + P+++FL +PL+ N+YPY A A
Sbjct: 118 LG-HIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYLAWA 176
Query: 215 GNRQ-ISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273
N + + YALF + TVV DG+ Y++LFD +DA Y A+ K GG S+ +V+SESGWP
Sbjct: 177 YNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWP 236
Query: 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWG 333
+ GG A NAR YN +LI HV RG+P+ PG IETYIFAMF+EN K +E++WG
Sbjct: 237 SGGGTAA--TPANARFYNQHLINHVGRGTPRHPG-AIETYIFAMFNENQKDSG-VEQNWG 292
Query: 334 LFAPTRQPRYQINF 347
LF P Q Y INF
Sbjct: 293 LFYPNMQHVYPINF 306
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Score = 342 bits (879), Expect = e-118
Identities = 158/315 (50%), Positives = 204/315 (64%), Gaps = 11/315 (3%)
Query: 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLR 94
IGVCYG++GNNLPS+ DV+ LY I MR+Y + +AL ALR S I ++L + N+ L
Sbjct: 1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLA 60
Query: 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAG 154
IA++ + A +WVQNNVR + V KYIA GNE + Q ++PAMRN+ A++AAG
Sbjct: 61 NIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG--GATQSILPAMRNLNAALSAAG 118
Query: 155 LGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIA 214
L IKVST+I + SFPPS G FK Y + + R L +PLL N+YPYFA
Sbjct: 119 L-GAIKVSTSIRFDEVANSFPPSAGVFKNAY---MTDVARLLASTGAPLLANVYPYFAYR 174
Query: 215 GNRQ-ISLDYALFRSQQTVV-SDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGW 272
N ISL+YA F+ TV + L+Y SLFDA++DAVYAALEK G ++ +V+SESGW
Sbjct: 175 DNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGW 234
Query: 273 PTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHW 332
P+AGG A + NARTYN LI HV G+PK+ +ETYIFAMF+EN KTG ER +
Sbjct: 235 PSAGGFAA--SAGNARTYNQGLINHVGGGTPKKRE-ALETYIFAMFNENQKTGDATERSF 291
Query: 333 GLFAPTRQPRYQINF 347
GLF P + P Y I F
Sbjct: 292 GLFNPDKSPAYNIQF 306
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 348 | |||
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 100.0 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 100.0 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 100.0 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.38 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.32 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.16 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 98.98 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 98.97 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 98.6 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 98.59 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 98.57 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 98.54 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.51 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.4 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 98.33 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 98.33 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 98.31 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 98.27 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 98.17 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.08 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 98.02 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 98.01 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 97.93 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 97.93 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 97.87 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 97.79 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 97.47 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 97.32 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 97.1 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 97.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 96.99 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 96.91 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 96.85 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 96.36 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 96.32 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 96.22 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 96.21 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 96.06 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 95.62 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 95.52 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 95.15 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 95.1 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 95.0 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 94.96 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 94.91 | |
| d2f6ka1 | 306 | Putative amidohydrolase LP2961 {Lactobacillus plan | 91.31 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 89.94 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 89.81 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 85.73 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 83.96 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 83.92 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 81.35 |
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=100.00 E-value=1.4e-85 Score=631.09 Aligned_cols=311 Identities=58% Similarity=1.033 Sum_probs=300.3
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||++++|+||+++|++|||++||++||||++|++||+|++++||+||||||++++.+++++++.+.+|++++|.+|
T Consensus 1 ~gi~yg~~~~nlps~~~vv~lLk~~~i~~IRlY~~d~~vL~A~~~tgi~v~lGv~n~~l~~~~~~~~~a~~wv~~~v~~~ 80 (312)
T d2cyga1 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQSLASNPSAAGDWIRRNVVAY 80 (312)
T ss_dssp CEEECCCCCSSCCCHHHHHHHHHHTTCCEEEESSCCHHHHHHHTTSCCEEEEEECHHHHHHHHHCTTHHHHHHHHHTGGG
T ss_pred CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeeccchhhhccCCHHHHHHHHHHHHhcc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
+++++|++|+||||+|.+++....++++|+++|++|++.|+.+.|+++++.++++|..++|||++.|++|+.+.|+++++
T Consensus 81 ~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s~p~sa~~~~~~~~~~l~~~~~ 160 (312)
T d2cyga1 81 WPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAYLSPIVQ 160 (312)
T ss_dssp TTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCSSGGGCCBCHHHHHHHHHHHH
T ss_pred CCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccCCCCccccccchhHHHHHHHHH
Confidence 99999999999999999988778899999999999999999989999999999999999999999999999899999999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccC
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWP 273 (348)
||+.++|||++|+||||++..+ ..++++|++|++.+..+.+++..|+|+||+|+|++++||+++|+++++|+|+|||||
T Consensus 161 fl~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~~~a~~~~g~~~~~ivI~EtGWP 240 (312)
T d2cyga1 161 FLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAVFAALERVGGANVAVVVSESGWP 240 (312)
T ss_dssp HHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEEECCC
T ss_pred HHHhcCCeeeEeccchhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCcc
Confidence 9999999999999999999988 889999999998777888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 274 S~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|+|+.+ .||++||++|++++++|+++|||+||+.++++||||+|||+||+ +++|+|||||++||++||+|+|
T Consensus 241 s~G~~~-~as~~na~~y~~~l~~~~~~gtp~~~~~~i~~f~FeaFDE~wK~-G~~E~~wGlf~~d~~~ky~l~f 312 (312)
T d2cyga1 241 SAGGGA-EASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNENQKA-GGIEQNFGLFYPNKQPVYQISF 312 (312)
T ss_dssp SSSSST-TSSHHHHHHHHHHHHHHGGGCCSSSCSSCCCEEESCSBCCTTSC-SSGGGCCCSBCTTSCBSSCCCC
T ss_pred cCCCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCCCCccEEEEeEeCCCCCC-CCccCccccCCCCCCEecCCCC
Confidence 999855 49999999999999999999999999999999999999999997 4799999999999999999997
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=100.00 E-value=1.7e-84 Score=621.98 Aligned_cols=304 Identities=51% Similarity=0.887 Sum_probs=290.0
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||++++|+||+++|++|||++||++||||++|++||+|++++||+|+||||++++.+++++++.+..||+++|.+|
T Consensus 1 ~gi~yg~~~~n~ps~~~Vv~llks~~i~~VRlY~~d~~vL~A~~~~gi~v~lGv~n~~l~~~~~~~~~a~~~v~~~i~~~ 80 (306)
T d1ghsa_ 1 IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPY 80 (306)
T ss_dssp CEEECCCCSSSCCCHHHHHHHHHHHTCCEEEESSCCHHHHHHTTTSCCEEEEECCGGGHHHHHHCHHHHHHHHHHHTTTT
T ss_pred CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEEeccchhhhhccCHHHHHHHHHHHHHhh
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
+|+++|++|+||||++.++ ...|+++|++||++|+++|+.+ ++|+|++.++++..++|||.|.|+. +.+.++++
T Consensus 81 ~~~~~I~~I~VGNEvl~~~--~~~l~~a~~~i~~al~~~gl~~-i~v~t~~~~~~~~~~~p~s~~~f~~---~~~~~~~~ 154 (306)
T d1ghsa_ 81 YPAVNIKYIAAGNEVQGGA--TQSILPAMRNLNAALSAAGLGA-IKVSTSIRFDEVANSFPPSAGVFKN---AYMTDVAR 154 (306)
T ss_dssp TTTSEEEEEEEEESCCGGG--GGGHHHHHHHHHHHHHHHTCTT-SEEEEEEEGGGEECCSSGGGCEESS---THHHHHHH
T ss_pred CCCceEEEEEecceeccCC--cchhHHHHHHHHHHHHHCCCCC-ceeecccccccccCCCCCCccccch---hhhhHHHH
Confidence 9999999999999999874 5689999999999999999975 9999999999999999999999986 47899999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCC-ceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeecc
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQ-TVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGW 272 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~-~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGW 272 (348)
||++++||+++|+||||++..+ ..++++||+|++.+ ..+.+++..|.|+||+|+|+++.||+++|+++|+|+|+||||
T Consensus 155 ~L~~~~d~~~vN~yPyf~~~~~~~~~~l~~alf~~~~~~~~~~~~~~y~n~~d~~~d~~~~A~~~~~~~~k~ivI~ETGW 234 (306)
T d1ghsa_ 155 LLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGW 234 (306)
T ss_dssp HHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHHHHHHHHHHHTCTTCCEEEEEECC
T ss_pred HHHhcCCceEeecchhhhhcCCccccccchhhcCCCCceecCchHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEccccc
Confidence 9999999999999999999988 89999999999755 356788999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 273 PTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 273 PS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
||+|+.+ ||++||++|++++++|+++|||+|++ ++++|+||+|||+||+++++|||||||++||+|||+|+|
T Consensus 235 PS~G~~~--as~~na~~y~~~l~~~~~~gt~~r~~-~i~~f~FeaFDE~wK~~~~~E~~wGlf~~d~~~ky~~~f 306 (306)
T d1ghsa_ 235 PSAGGFA--ASAGNARTYNQGLINHVGGGTPKKRE-ALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 306 (306)
T ss_dssp CSSSSTT--CCHHHHHHHHHHHHTTGGGCCSSCCS-CCCEEEECSBCCTTCCSSGGGGGCCSBCTTSCBSSCCCC
T ss_pred ccCCCCC--CCHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEeeeCcCCCCCCCccCccccCCCCCCEecCCCC
Confidence 9999877 99999999999999999999999986 899999999999999877899999999999999999987
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=100.00 E-value=1.2e-83 Score=616.06 Aligned_cols=305 Identities=48% Similarity=0.904 Sum_probs=292.1
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecCChHHHHHHhcCCCEEEEecCCCchhhhhhcHHHHHHHHHhhcccc
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDPNREALEALRGSNIEVMLGLPNNDLRRIASNQAEANTWVQNNVRNF 114 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~d~~vl~A~~~~glkV~lGv~~~~~~~~a~~~~~a~~wv~~~v~~~ 114 (348)
+|||||++++|+||+++|++|||+++|++||||++|++||+|++++||||+||||++++.+++++.+.+..|+++++..
T Consensus 1 iGv~yg~~~~nlps~~~Vv~lLk~~~i~~IRlY~~d~~vL~A~~~~gi~v~lGv~n~~l~~~~~~~~~~~~~v~~~v~~- 79 (306)
T d1aq0a_ 1 IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNIQA- 79 (306)
T ss_dssp CEEECCCCCSSCCCHHHHHHHHHHHTCCEEEESSCCHHHHHHHTTSCCEEEEEECGGGHHHHHHCHHHHHHHHHHHTTT-
T ss_pred CeeeCCCccCCCCCHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHhcCCEEEEeccchhhhhccCCHHHHHHHHHHhccc-
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHH
Q 018955 115 ANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIR 194 (348)
Q Consensus 115 ~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~ 194 (348)
+++++|++|+||||++.+. ...++++|++|+++|+++||.+ |+|+|+++.+++..++|||++.|++++.++|+|+++
T Consensus 80 ~~~~~I~~i~VGNE~~~~~--~~~l~~a~~ni~~al~~~gl~~-i~vs~~~~~~~~~~s~pps~~~f~~~~~~~~~~~~~ 156 (306)
T d1aq0a_ 80 YPKVSFRYVCVGNEVAGGA--TRNLVPAMKNVHGALVAAGLGH-IKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQ 156 (306)
T ss_dssp CTTSEEEEEEEEESCCGGG--GGGHHHHHHHHHHHHHHTTCTT-SEEEEEEEGGGEEECSSGGGCEECHHHHHHHHHHHH
T ss_pred cCCceEEEEEeccEeecCC--ccchhhHHHHHHHHHHHCCCCc-eeEEEeecceeeccCCCCCcceeccchHHHHHHHHH
Confidence 5889999999999999864 4668999999999999999974 999999999999999999999999999999999999
Q ss_pred HHhhcCCcccccccccccccCC-CCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccC
Q 018955 195 FLNENRSPLLLNLYPYFAIAGN-RQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWP 273 (348)
Q Consensus 195 fL~~~~d~~~vN~yPff~~~~~-~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWP 273 (348)
||++++||+++|+||||++..+ ..++++|++|++.+..+.|++..|+|+||+|+|+++.||++.|+++|+|+|+|||||
T Consensus 157 ~l~~~~~~~~vN~yPyf~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~~a~~d~~~~al~~~~~~~k~ivI~EtGWP 236 (306)
T d1aq0a_ 157 FLARTNAPLMANIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWP 236 (306)
T ss_dssp HHHHHTCCEEEECCHHHHHHHCTTSSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEECCCC
T ss_pred HHHHcCCeeEEecccchhhhcCccccccchhhccCCCceecCcHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEeccccc
Confidence 9999999999999999999988 889999999998777888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCCCCeeeeccc
Q 018955 274 TAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPTRQPRYQINF 347 (348)
Q Consensus 274 S~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d~~~ky~l~~ 347 (348)
|+|+.+ ||++||++|++++++|+.+|||+||+ ++++|+||+|||+||+ +++|||||||++||++||+|+|
T Consensus 237 S~G~~~--as~~na~~y~~~l~~~~~~gt~~~~~-~i~~f~FeaFDE~wK~-g~~E~~wGlf~~d~~~ky~~~f 306 (306)
T d1aq0a_ 237 SGGGTA--ATPANARFYNQHLINHVGRGTPRHPG-AIETYIFAMFNENQKD-SGVEQNWGLFYPNMQHVYPINF 306 (306)
T ss_dssp SSSSTT--CCHHHHHHHHHHHHHHTTTBCSSSBS-CCCBEESCSBCCTTSC-SSGGGCCCSBCTTSCBSSCCCC
T ss_pred cCCCCC--CCHHHHHHHHHHHHHHHhcCCCCCCC-CeeEEEEeeeCcCCCC-CCccCeeeeECCCCCEecCCCC
Confidence 999877 99999999999999999999999997 8999999999999998 5799999999999999999997
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.38 E-value=1.2e-11 Score=114.71 Aligned_cols=249 Identities=11% Similarity=0.171 Sum_probs=143.2
Q ss_pred HHHHHHHHhhCCCCeEEEec------CC------hHHHHHHhcCCCEEEEecCCCch--------------hhhhhcHHH
Q 018955 49 KRDVIALYNQNNIRRMRLYD------PN------REALEALRGSNIEVMLGLPNNDL--------------RRIASNQAE 102 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~------~d------~~vl~A~~~~glkV~lGv~~~~~--------------~~~a~~~~~ 102 (348)
+.++++++|..|++.||+.- -. ..+++.+++.||+|+|-+-.++- .....-.++
T Consensus 29 ~~~~~~~lk~~G~n~VRi~vW~~p~~g~~~~~~~~~~v~~a~~~gl~vil~~h~~~~wa~~~~~~~p~~~~~~~~~~~~~ 108 (332)
T d1hjsa_ 29 AQPLENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWK 108 (332)
T ss_dssp BCCHHHHHHHTTCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHH
T ss_pred cccHHHHHHHcCCCEEEeeeeecCCCCccCHHHHHHHHHHHHHCCCEEEEEecCCccccCccccCCCcccccchhHHHHH
Confidence 46788999999999999951 11 36777888999999998743210 011111122
Q ss_pred HHHHHHhhccccC-CCceEEEEEecccccCCC-------cchHHHHHHHHHHHHHHHHcCCCCceEEeeeeecccccccc
Q 018955 103 ANTWVQNNVRNFA-NNVKFKYIAVGNEAKPGD-------NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESF 174 (348)
Q Consensus 103 a~~wv~~~v~~~~-~~~~I~~I~VGNE~l~~~-------~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~ 174 (348)
+.++.+.-+..+. -+..+..+.||||.-... .....+...++..-+++++.+....++|......
T Consensus 109 ~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~av~~~~~~~~~~v~~~~~~------- 181 (332)
T d1hjsa_ 109 LYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN------- 181 (332)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC-------
T ss_pred HHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHHHHHhhccCCCcceeecccC-------
Confidence 2222222222210 146788999999964321 1356677778777778887765555555543311
Q ss_pred CCCCcccccCccchhhHHHHHHh---hcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHH
Q 018955 175 PPSRGSFKQDYRPILDPLIRFLN---ENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251 (348)
Q Consensus 175 pPs~~~f~~d~~~~~~~~l~fL~---~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~ 251 (348)
+...... ...+..+++.+. ..-|++++|.||+|....+ +....+.+
T Consensus 182 ~~~~~~~----~~~~~~~~~~~~~~~~~~D~ig~~~Y~~~~~~~~---------------------------~~~~~~~~ 230 (332)
T d1hjsa_ 182 GWDWGTQ----NWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSAT---------------------------LSALKSSL 230 (332)
T ss_dssp TTCHHHH----HHHHHHHHTTSSSCGGGCCEEEEECCSSSCTTCC---------------------------HHHHHHHH
T ss_pred cCchhhh----hhHHHHHHhcCcccCCccceEeeeecCCCCCCCC---------------------------HHHHHHHH
Confidence 0000000 001112221111 1348999999999875421 01111222
Q ss_pred HHHHHHhCCCCccEEEeeeccCCCCCC----------CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCC
Q 018955 252 YAALEKTGGGSLGIVISESGWPTAGGD----------GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDEN 321 (348)
Q Consensus 252 ~~a~~~~g~~~~~v~I~ETGWPS~G~~----------~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~ 321 (348)
....+.. +++++|+|+|||..... +..+|++.|+.|.+.++..+.. .+ .++.+||-+ -.
T Consensus 231 ~~~~~~~---g~~v~i~E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~----~~-~g~G~~yW~---~~ 299 (332)
T d1hjsa_ 231 DNMAKTW---NKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSS----VS-RGVGLFYWE---PA 299 (332)
T ss_dssp HHHHHHH---CCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHT----ST-TEEEEEEEC---TT
T ss_pred HHHHHHh---CCceEEEEeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHh----cC-CceEEEEec---Cc
Confidence 2222333 46999999999975431 1247999999999999988751 11 245555443 23
Q ss_pred CCC---CCCCCCceeeecCCCCeeeecc
Q 018955 322 GKT---GPEIERHWGLFAPTRQPRYQIN 346 (348)
Q Consensus 322 wK~---~~~~E~~wGl~~~d~~~ky~l~ 346 (348)
|.+ ++...-++|||+.||+||-.+.
T Consensus 300 ~~~~~~~g~~~~~~gLfd~~g~~~pa~~ 327 (332)
T d1hjsa_ 300 WIHNANLGSSCADNTMFSQSGQALSSLS 327 (332)
T ss_dssp CGGGTTTTSSSSBCCSBCTTSBBCGGGG
T ss_pred ccCCCCCCCccCCCceECCCCCCcHHHH
Confidence 332 1234456999999999998774
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.32 E-value=7e-11 Score=111.81 Aligned_cols=244 Identities=12% Similarity=0.242 Sum_probs=141.7
Q ss_pred HHHHHHHhhCCCCeEEEec---C-----C----hHHHHHHhcCCCEEEEecCCCchhh---------------hhhcHHH
Q 018955 50 RDVIALYNQNNIRRMRLYD---P-----N----REALEALRGSNIEVMLGLPNNDLRR---------------IASNQAE 102 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~---~-----d----~~vl~A~~~~glkV~lGv~~~~~~~---------------~a~~~~~ 102 (348)
.+..++||..|++.||+.- + + ..+.+.+++.||+|++-+--++-.+ ..+..++
T Consensus 30 ~d~~~~lk~~G~n~VRlrvW~~p~~g~~~~~~~~~~~~~a~~~Gm~vll~~hysd~Wadp~~q~~P~aw~~~~~~~~~~~ 109 (334)
T d1foba_ 30 QALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQ 109 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHHH
T ss_pred ccHHHHHHHcCCCEEEeeeeeCCCCCcCcHHHHHHHHHHHHHCCCEEEEEecCCCcccCCCcCCCcccccccccccHHHH
Confidence 5678899999999999962 1 1 2455667789999999996442110 1111222
Q ss_pred HHHHHHhhccccC-CCceEEEEEecccccCC-----C--cchHHHHHHHHHHHHHHHHcCCCCceEEeeeeecccccccc
Q 018955 103 ANTWVQNNVRNFA-NNVKFKYIAVGNEAKPG-----D--NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESF 174 (348)
Q Consensus 103 a~~wv~~~v~~~~-~~~~I~~I~VGNE~l~~-----~--~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~ 174 (348)
..+..+..+..+. .+..++.+-||||.=.. + ...+.+...++...+++|+.+-...++|..... ...
T Consensus 110 ~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i~~~~~-----~~~ 184 (334)
T d1foba_ 110 LYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLD-----DGW 184 (334)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEES-----CTT
T ss_pred HHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccceeeecc-----cCC
Confidence 2332222232221 14678899999996432 1 246778888888889998886544455543221 100
Q ss_pred CCCCcccccCccchhhHHHHHH---hhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHH
Q 018955 175 PPSRGSFKQDYRPILDPLIRFL---NENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAV 251 (348)
Q Consensus 175 pPs~~~f~~d~~~~~~~~l~fL---~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~ 251 (348)
+ .... ...++.++.-. ...-|++++|.||||....+ . ..+...+..+
T Consensus 185 ~--~~~~----~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~~~----------------l--------~~l~~~l~~l 234 (334)
T d1foba_ 185 S--WDQQ----NYFYETVLATGELLSTDFDYFGVSYYPFYSASAT----------------L--------ASLKTSLANL 234 (334)
T ss_dssp C--HHHH----HHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCC----------------H--------HHHHHHHHHH
T ss_pred C--hhhh----HHHHHHHHhcCCCCCCCcCeEEEecCCCCCCccc----------------H--------HHHHHHHHHH
Confidence 0 0000 00111122111 11349999999999975311 0 1111112221
Q ss_pred HHHHHHhCCCCccEEEeeeccCCCCCC----------CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCC
Q 018955 252 YAALEKTGGGSLGIVISESGWPTAGGD----------GALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDEN 321 (348)
Q Consensus 252 ~~a~~~~g~~~~~v~I~ETGWPS~G~~----------~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~ 321 (348)
..+. +|+|+|+|||||..... +.-+|++.|+.|...+.+.++ ..++ +..+||-| -.
T Consensus 235 ---~~~y---~k~v~I~Et~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~----~~~~-G~G~~YWe---p~ 300 (334)
T d1foba_ 235 ---QSTY---DKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVE----ATTD-GLGVYYWE---PA 300 (334)
T ss_dssp ---HHHH---CCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHH----TSTT-EEEEEEEC---TT
T ss_pred ---HHHh---CCceEEEEecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHh----hcCC-ceEEEEeC---CC
Confidence 1232 57999999999976531 124889999999999998875 1232 66677664 35
Q ss_pred CCCCC----CCCCceeeecCCCCeee
Q 018955 322 GKTGP----EIERHWGLFAPTRQPRY 343 (348)
Q Consensus 322 wK~~~----~~E~~wGl~~~d~~~ky 343 (348)
|.+.. .+|.. +||+.++...+
T Consensus 301 w~~~~g~G~~~~n~-~lfD~~~~~~~ 325 (334)
T d1foba_ 301 WIGNAGLGSSCADN-LMVDYTTDEVY 325 (334)
T ss_dssp CTTCTTTTSSSSBC-CSBCTTTCBBC
T ss_pred cccCCCCCcchhhc-ccccCCCCcch
Confidence 66532 24444 89997765443
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.16 E-value=1.5e-10 Score=106.53 Aligned_cols=271 Identities=11% Similarity=0.032 Sum_probs=151.4
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecC---------------------C----hHHHHHHhcCCCEEEEecC
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDP---------------------N----REALEALRGSNIEVMLGLP 89 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~---------------------d----~~vl~A~~~~glkV~lGv~ 89 (348)
+|.|..+.....--.+++.++.+..|++.||+.+. | ..++..+...|+++++.+.
T Consensus 9 ~g~~~~~~~l~~d~~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd~~~~D~~~~~~~~~g~~~~~~l~ 88 (346)
T d1uhva2 9 VGTGRLGLALQKEYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVEIG 88 (346)
T ss_dssp EECSCGGGGGBHHHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCHHHHHHHHHHHHHTCEECEEEC
T ss_pred cccCCcccccCHHHHHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccChHhHHHHHHHHHHcCCCeEEEEe
Confidence 45555444311111234555667789999997421 1 2578888889999887763
Q ss_pred CC-----c----------hhhhhhcHHHHHHHHHhhccccC-----CCceEEEEEecccccCCC----cchHHHHHHHHH
Q 018955 90 NN-----D----------LRRIASNQAEANTWVQNNVRNFA-----NNVKFKYIAVGNEAKPGD----NFAQYLVPAMRN 145 (348)
Q Consensus 90 ~~-----~----------~~~~a~~~~~a~~wv~~~v~~~~-----~~~~I~~I~VGNE~l~~~----~~~~~Ll~~i~~ 145 (348)
.. . ...-..+.+.-.+++.+.+..|. ....|..+-||||+=... .++++....++.
T Consensus 89 ~~p~~~~~~~~~~~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~~~~y~~~~~~ 168 (346)
T d1uhva2 89 FMPKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYKV 168 (346)
T ss_dssp CCCTTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHHH
T ss_pred ccCccccCCCCCcccccccCCChhhHHHHHHHHHHHHHHHHhhcCcccccccccccccCcccccCCCCCCHHHHHHHHHH
Confidence 11 0 00000122222333333333321 012467899999984321 257788888889
Q ss_pred HHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhh---cCCcccccccccccccCCCCCCcc
Q 018955 146 IQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNE---NRSPLLLNLYPYFAIAGNRQISLD 222 (348)
Q Consensus 146 v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~---~~d~~~vN~yPff~~~~~~~i~~~ 222 (348)
+.+++++..- +++|......... .......++++.+ ..|++.+|.||+..........
T Consensus 169 ~~~aik~~~P--~~~v~~~~~~~~~---------------~~~~~~~l~~~~~~~~~~D~i~~H~Y~~~~~~~~~~~~-- 229 (346)
T d1uhva2 169 TAKAIKEVNE--NLKVGGPAICGGA---------------DYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLI-- 229 (346)
T ss_dssp HHHHHHHHCT--TSCEEEEEECTTC---------------THHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCC--
T ss_pred HHHHHhccCC--CceEeeccccCCc---------------cccHHHHHHHHHhcCCcccceeeecCCCCCCcCCccch--
Confidence 9999988764 4666554321110 1123334443333 6899999999865543211100
Q ss_pred ccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC
Q 018955 223 YALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGS 302 (348)
Q Consensus 223 ~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gt 302 (348)
.. .... . ......+..+...+...+.++++|+++|.||++...... .+...|+.|+...+....
T Consensus 230 ~~--------~~~~---~-~~~~~~~~~~~~~~~~~~~~~~pi~~tE~g~~~~~~~~~-~~~~~~a~~~~~~~~~~~--- 293 (346)
T d1uhva2 230 YQ--------EIMP---S-EYMLNEFKTVREIIKNSHFPNLPFHITEYNTSYSPQNPV-HDTPFNAAYIARILSEGG--- 293 (346)
T ss_dssp CC--------CBCC---H-HHHHHHHHHHHHHHHTSSCTTCCEEEEEEESCSCTTCGG-GGSHHHHHHHHHHHHHGG---
T ss_pred hh--------hhhh---h-hhHHHHHHHHHHHHHhcCCCCccceeccccCCCCCCCCc-ccHHHHHHHHHHHHHHhc---
Confidence 00 0000 1 222233444555566667788999999999998765221 222334445444443332
Q ss_pred CCCCCCCccEEEEEeecCCCCCC---CCCCCceeeecCCCCeeee
Q 018955 303 PKRPGRPIETYIFAMFDENGKTG---PEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 303 p~~~~~~~~~f~F~~fDe~wK~~---~~~E~~wGl~~~d~~~ky~ 344 (348)
.+ -..++|+.+.|..++.+ ...|.+|||++.|++||-.
T Consensus 294 ---~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~Gll~~dg~pKPa 334 (346)
T d1uhva2 294 ---DY-VDSFSYWTFSDVFEERDVPRSQFHGGFGLVALNMIPKPT 334 (346)
T ss_dssp ---GT-CSEEEESCSBSCCCTTSSCCSSCSCCSCSEETTTEECHH
T ss_pred ---cc-ccEEEEEEeeccccccCCCCCcccCCccccCCCCCCCHH
Confidence 11 34577888888777654 2478999999999999954
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=5.8e-08 Score=87.79 Aligned_cols=257 Identities=14% Similarity=0.053 Sum_probs=146.2
Q ss_pred eeeEEecCCCCC---CCCHHHH---HHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCc--hhh--hhhcHH
Q 018955 34 QIGVCYGMLGNN---LPSKRDV---IALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNND--LRR--IASNQA 101 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~~v---~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~--~~~--~a~~~~ 101 (348)
..|+||.+.... .++.+++ ++++|+.|++.||++.. ++..+.+|.+.||.|+..++... ... -....+
T Consensus 17 lrG~~~~~~~~~~g~~~~~~~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv~~e~~~~~~~~~~~~~~~~~~ 96 (304)
T d1bhga3 17 FHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLH 96 (304)
T ss_dssp EEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEEEECCSCCCTTSSGGGSHHHHH
T ss_pred EEeEEcCCCCCccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCeeeecccccccccccccchHHHH
Confidence 359999765432 2456554 56888999999999854 36899999999999999875321 100 011123
Q ss_pred HHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCccc
Q 018955 102 EANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSF 181 (348)
Q Consensus 102 ~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f 181 (348)
...+.+.+.|..+...-.|-.-.+|||.-.+.... ...++.+.+.++. +++.-||+.+.....-.
T Consensus 97 ~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~~~~~~---~~~~~~~~~~ik~--~Dptrpv~~~~~~~~~~---------- 161 (304)
T d1bhga3 97 HHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESA---GYYLKMVIAHTKS--LDPSRPVTFVSNSNYAA---------- 161 (304)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEEEESCCTTSHHH---HHHHHHHHHHHHT--TCCSSCEEEEBCCCTTT----------
T ss_pred HHHHHHHHHHHHhcCCCcHHHhccCCCCCcccchh---hhhhHHHHHHHHh--hCCCCceeeeccccccc----------
Confidence 33444555566554334577889999986543322 2333444444444 33334666543211100
Q ss_pred ccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCC
Q 018955 182 KQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGG 261 (348)
Q Consensus 182 ~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~ 261 (348)
+ . .....|++..|.|+.+..... ..+ .....+....+.. .. ..
T Consensus 162 --~--~--------~~~~~d~~~~~~~~~~~~~~~---~~~----------------~~~~~~~~~~~~~---~~---~~ 204 (304)
T d1bhga3 162 --D--K--------GAPYVDVICLNSYYSWYHDYG---HLE----------------LIQLQLATQFENW---YK---KY 204 (304)
T ss_dssp --C--S--------SGGGCSSEEEECCTTSSSSTT---CHH----------------HHHHHHHHHHHHH---HH---HS
T ss_pred --c--c--------ccccccccccccccccccccc---chh----------------hhhhhhhHHHHHh---hc---cC
Confidence 0 0 224558888888876543210 000 0011111112211 11 25
Q ss_pred CccEEEeeeccCCCCCC-C---CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCC--CCCCCceeee
Q 018955 262 SLGIVISESGWPTAGGD-G---ALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTG--PEIERHWGLF 335 (348)
Q Consensus 262 ~~~v~I~ETGWPS~G~~-~---~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~--~~~E~~wGl~ 335 (348)
++|++++|.|+-+..+. + ...+.+.+..+.+.....+... .+|+ -...+++.+||-.+... +..+.+|||+
T Consensus 205 ~~p~~~~e~g~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~--~~~~-~~G~~~w~~~D~~~~~~~~~~~~~~~Gl~ 281 (304)
T d1bhga3 205 QKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQK--RRKY-VVGELIWNFADFMTEQSPTRVLGNKKGIF 281 (304)
T ss_dssp CSCEEEEECCCCCCTTCCCSSCCSSCHHHHHHHHHHHHHHHHHH--TTTT-EEEEEEEESBCBCCCCBTTBSSSBCCCSB
T ss_pred CCCeEEecchhhcccccCCCcccccCHHHHHHHHHHHHHHHHHh--CCCC-eEEEEEeeeEecCCCCCCCCCCccccccC
Confidence 78999999998776541 1 1356677777666655544311 1343 34578889998554432 2345689999
Q ss_pred cCCCCeeeec
Q 018955 336 APTRQPRYQI 345 (348)
Q Consensus 336 ~~d~~~ky~l 345 (348)
+.+|+||.+.
T Consensus 282 d~~~~PK~a~ 291 (304)
T d1bhga3 282 TRQRQPKSAA 291 (304)
T ss_dssp CTTSCBCHHH
T ss_pred CCCCCCCHHH
Confidence 9999999754
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=98.97 E-value=1.6e-08 Score=96.56 Aligned_cols=218 Identities=11% Similarity=0.234 Sum_probs=125.4
Q ss_pred HHHHHHHHhhCCCCeEEEe------cC----------C----hHHHHHHhcCCCEEEEecCCCch---------h-----
Q 018955 49 KRDVIALYNQNNIRRMRLY------DP----------N----REALEALRGSNIEVMLGLPNNDL---------R----- 94 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY------~~----------d----~~vl~A~~~~glkV~lGv~~~~~---------~----- 94 (348)
..+.+++||+.|++.||+- .. + ..+++.+++.||+|+|.+--++- +
T Consensus 40 ~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd~wadp~~q~~p~~w~~ 119 (387)
T d1ur4a_ 40 KQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWAN 119 (387)
T ss_dssp BCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTT
T ss_pred cccHHHHHHHcCCCEEEeecccCCcccccCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCCCCCCchhhhc
Confidence 4567999999999999983 11 1 24566677899999998753210 0
Q ss_pred -hhhhcHHHHHHHHHhhccccC-CCceEEEEEecccccCC---CcchHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccc
Q 018955 95 -RIASNQAEANTWVQNNVRNFA-NNVKFKYIAVGNEAKPG---DNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGA 169 (348)
Q Consensus 95 -~~a~~~~~a~~wv~~~v~~~~-~~~~I~~I~VGNE~l~~---~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~ 169 (348)
....-...+.++.+..+..+. -+..+..+-||||+-.. ......+...++...+++++..- +++|..-...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp--~~~vi~~~~~-- 195 (387)
T d1ur4a_ 120 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDS--NILVALHFTN-- 195 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCT--TSEEEEEECC--
T ss_pred cchhHHHHHHHHHHHHHHHHHhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCC--CceEEEeccC--
Confidence 000011122222222222221 14578889999998543 12567788888888888877753 3455432210
Q ss_pred cccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHH
Q 018955 170 LGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILD 249 (348)
Q Consensus 170 ~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~d 249 (348)
+-+.+.+ ..+.+.+..-....|+++++.||||...- .-+...++
T Consensus 196 -----~~~~~~~-----~~~~~~~~~~~~~~d~ig~s~Y~~w~~~~--------------------------~~~~~~l~ 239 (387)
T d1ur4a_ 196 -----PETSGRY-----AWIAETLHRHHVDYDVFASSYYPFWHGTL--------------------------KNLTSVLT 239 (387)
T ss_dssp -----TTSTTHH-----HHHHHHHHHTTCCCSEEEEEECTTTSCCH--------------------------HHHHHHHH
T ss_pred -----ccchHHH-----HHHHHHHHhcCCCcccccceeecccCccH--------------------------HHHHHHHH
Confidence 0011111 01112222223356899999999986420 11112222
Q ss_pred HHHHHHHHhCCCCccEEEeeeccCCCCC---------------CCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEE
Q 018955 250 AVYAALEKTGGGSLGIVISESGWPTAGG---------------DGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYI 314 (348)
Q Consensus 250 a~~~a~~~~g~~~~~v~I~ETGWPS~G~---------------~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~ 314 (348)
.+. ++. +|+|+|+|++||.... .+.-+|++.|+.|.+.+.+.+.. .++.++.+||
T Consensus 240 ~l~---~~~---~k~v~v~E~~~~~t~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~----~~~~G~G~~Y 309 (387)
T d1ur4a_ 240 SVA---DTY---GKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSD----VGEAGIGVFY 309 (387)
T ss_dssp HHH---HHH---CCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHT----TCTTEEEEEE
T ss_pred HHH---HHh---CCceEEEEecccccCCCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHh----cCCCceEEEE
Confidence 221 332 5799999999996532 01136899999999999988752 2223677777
Q ss_pred EE
Q 018955 315 FA 316 (348)
Q Consensus 315 F~ 316 (348)
.|
T Consensus 310 We 311 (387)
T d1ur4a_ 310 WE 311 (387)
T ss_dssp EC
T ss_pred ec
Confidence 65
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=98.60 E-value=2.1e-06 Score=78.95 Aligned_cols=235 Identities=12% Similarity=0.099 Sum_probs=125.5
Q ss_pred CeeeEEecCCC-----CCCCCHH---HHHHHHhhCCCCeEEEecCC----------------------------hHHHHH
Q 018955 33 AQIGVCYGMLG-----NNLPSKR---DVIALYNQNNIRRMRLYDPN----------------------------REALEA 76 (348)
Q Consensus 33 ~~~Gi~Y~~~~-----~~~~s~~---~v~~ll~~~~~~~VRlY~~d----------------------------~~vl~A 76 (348)
...|+||-..+ ...++.+ +.++++|+.|++.||+|... ..+|.+
T Consensus 19 ~~~G~N~~~~~~~~~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~g~~de~gl~~~d~~l~~ 98 (410)
T d1uuqa_ 19 VITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVE 98 (410)
T ss_dssp CEEEEECTTHHHHTCSSTTCCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHH
T ss_pred EEEEEecCCcccccccCCCCCHHHHHHHHHHHHHCCCcEEEeCCcccccccccccCCCcccccccccHHHHHHHHHHHHH
Confidence 36799975432 2234544 45778899999999997321 158888
Q ss_pred HhcCCCEEEEecCCCchh---------------------------------hhh---hcHHHHHHHHHhhcccc------
Q 018955 77 LRGSNIEVMLGLPNNDLR---------------------------------RIA---SNQAEANTWVQNNVRNF------ 114 (348)
Q Consensus 77 ~~~~glkV~lGv~~~~~~---------------------------------~~a---~~~~~a~~wv~~~v~~~------ 114 (348)
|++.||+|++.+...... ... ...+...+++++.+...
T Consensus 99 a~~~Gi~vi~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (410)
T d1uuqa_ 99 LAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGK 178 (410)
T ss_dssp HHHTTCEEEEECCBSSSTTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCC
T ss_pred HHHcCCeeEEeccccccccCCcccccccccCCCcCccccccccccccccccccccCHHHHHHHHHHHHHHHHhhhhhhhH
Confidence 999999999998642100 000 01122233343333321
Q ss_pred --CCCceEEEEEecccccCCCc-----chHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccc
Q 018955 115 --ANNVKFKYIAVGNEAKPGDN-----FAQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRP 187 (348)
Q Consensus 115 --~~~~~I~~I~VGNE~l~~~~-----~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~ 187 (348)
.....|....+|||+-.... ..+.+.+.++.....++...- +.+|+..... ... .. ..
T Consensus 179 ~~~~~p~i~~~~l~NE~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~dp--~~~v~~~~~~-~~~-~~-----------~~ 243 (410)
T d1uuqa_ 179 AYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDA--HHLVSSGSEG-EMG-SV-----------ND 243 (410)
T ss_dssp BGGGCTTEEEEESCBSCCSCSTTCCHHHHHHHHHHHHHHHHHHHHHCS--SSEEECCCCS-GGG-TT-----------TC
T ss_pred hhcCChhHhhhhhccccCCccCcccccchhhhhHHHHHHHhhhhhcCC--CceEeecccc-ccc-cc-----------cc
Confidence 11245888999999865431 356777888888888887654 3466654311 010 00 00
Q ss_pred hhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEE
Q 018955 188 ILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVI 267 (348)
Q Consensus 188 ~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I 267 (348)
.-........+..|++.+|.||++....+.. .....+ +.. . ...+..........+. .+||++|
T Consensus 244 ~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~--~~~~~~--------~~~--~-~~~~~~~~~~~~~~~~---~~kPv~i 307 (410)
T d1uuqa_ 244 MQVFIDAHATPDIDYLTYHMWIRNWSWFDKT--KPAETW--------PSA--W-EKAQNYMRAHIDVAKQ---LNKPLVL 307 (410)
T ss_dssp HHHHHHHHCSTTCCSEEEEECTTTTTSSCTT--SHHHHH--------HHH--H-HHHHHHHHHHHHHHHH---HTCCEEE
T ss_pred ccchhhhccCCccceEEeecCcccccccccc--cccccc--------cch--h-hhhHHHHHHHHHHHhh---cCCCeee
Confidence 0011122345678999999999765442200 000000 000 0 1111112222222233 3579999
Q ss_pred eeeccCCCCC-CCCCCCHHHHHHHHHHHHHHH
Q 018955 268 SESGWPTAGG-DGALTNVDNARTYNNNLIQHV 298 (348)
Q Consensus 268 ~ETGWPS~G~-~~~vas~~na~~y~~~~~~~~ 298 (348)
+|.|+++... .+...+......|.+.+++.+
T Consensus 308 ~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (410)
T d1uuqa_ 308 EEFGLDRDMGSYAMDSTTEYRDNYFRGVFELM 339 (410)
T ss_dssp EEECCCCGGGCCCTTSCCHHHHHHHHHHHHHH
T ss_pred eccccccCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 9999987654 111144455556665555443
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=98.59 E-value=9.1e-07 Score=79.87 Aligned_cols=129 Identities=12% Similarity=0.072 Sum_probs=84.5
Q ss_pred CeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecC-------C-----hHHHHHHhcCCCEEEEecCCCchhhhhhcH
Q 018955 33 AQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDP-------N-----REALEALRGSNIEVMLGLPNNDLRRIASNQ 100 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~-------d-----~~vl~A~~~~glkV~lGv~~~~~~~~a~~~ 100 (348)
...||||+.-- ..+..++.++.+|+.|++.|||+-. + ..+++.|.+.||.|++-+.......-....
T Consensus 19 ~l~Gvn~~~~~-~~~~~~~d~~~~~~~G~N~VRl~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~~~~~~~ 97 (297)
T d1wkya2 19 VMRGINHGHAW-YKDQATTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDSIASL 97 (297)
T ss_dssp CCEEEEECGGG-CGGGHHHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCCHHHH
T ss_pred EEEEeccCccc-CchHHHHHHHHHHHCCCcEEEEeccCCCccCccHHHHHHHHHHHHHHCCCceEeeccccccccccccH
Confidence 46799985321 1233466788999999999999621 1 368899999999999998653211111222
Q ss_pred HHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEee
Q 018955 101 AEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVST 163 (348)
Q Consensus 101 ~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT 163 (348)
+...+..+..+.+|.....|...-+.||+... ...+...++++.+-.++++.+-..-|.|..
T Consensus 98 ~~~~~~w~~~a~~~~~~p~v~~~~l~NEp~~~-~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~ 159 (297)
T d1wkya2 98 NRAVDYWIEMRSALIGKEDTVIINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDA 159 (297)
T ss_dssp HHHHHHHHHTGGGTTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEecccccccc-chhhhhhhhhhhhHHHHHhcCCCceEEEec
Confidence 33333334556666555568889999998653 245567777888888888887665454443
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=98.57 E-value=1.5e-06 Score=78.78 Aligned_cols=122 Identities=16% Similarity=0.160 Sum_probs=80.4
Q ss_pred eeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe-------cCC-----hHHHHHHhcCCCEEEEecCCC---chhhhhh
Q 018955 34 QIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY-------DPN-----REALEALRGSNIEVMLGLPNN---DLRRIAS 98 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY-------~~d-----~~vl~A~~~~glkV~lGv~~~---~~~~~a~ 98 (348)
..|||+...- .++..+.++.||+.|++.||+. ..+ ..++..|.+.||.|+|-+... ....-..
T Consensus 21 lrGvn~~~~~--~~~~~~~~~~i~~~G~N~VRl~~~~~~~~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~~~~~ 98 (302)
T d1bqca_ 21 IRGVSHPHNW--YPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSGAS 98 (302)
T ss_dssp CEEEEECTTT--CTTCTTHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTTCC
T ss_pred EEEeecCccc--ccchHHHHHHHHhcCCCEEEEecccccccCcchHHHHHHHHHHHHHCCCEEEEEecccccccCCCchH
Confidence 5599986432 3444567889999999999994 222 368899999999999988532 1111122
Q ss_pred cHHHHHHHHHhhccccCCCceEEEEEecccccCCCc-chHHHHHHHHHHHHHHHHcCCCC
Q 018955 99 NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN-FAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 99 ~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~-~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
..+...++.+.-+.+|.....|-..-++||+..... ..+.....++.+-+++++.+-..
T Consensus 99 ~~~~~~~~w~~ia~~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~ 158 (302)
T d1bqca_ 99 TLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEH 158 (302)
T ss_dssp CHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCc
Confidence 334444444445555543445778999999975432 35567777777777777776544
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=98.54 E-value=7.2e-07 Score=81.55 Aligned_cols=128 Identities=16% Similarity=0.203 Sum_probs=78.5
Q ss_pred CeeeEEecCCCCCCCCHHH---HHHHHhhCCCCeEEEecCC---------------------------------hHHHHH
Q 018955 33 AQIGVCYGMLGNNLPSKRD---VIALYNQNNIRRMRLYDPN---------------------------------REALEA 76 (348)
Q Consensus 33 ~~~Gi~Y~~~~~~~~s~~~---v~~ll~~~~~~~VRlY~~d---------------------------------~~vl~A 76 (348)
-+.|+||-.. ...++.++ .++++++.|++.||+|... ..++++
T Consensus 20 ~~~G~N~~~~-~~~~~~~~~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~ 98 (344)
T d1qnra_ 20 YFAGTNCYWC-SFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQS 98 (344)
T ss_dssp CEEEEECGGG-GGCCCHHHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHH
T ss_pred EEEEEccCCC-CcCCCHHHHHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHHHHHH
Confidence 3679997432 22455544 4678889999999997311 247888
Q ss_pred HhcCCCEEEEecCCC---c--hh-----------hhhhc---HHHHHHHHHhhccccCCCceEEEEEecccccCCCcchH
Q 018955 77 LRGSNIEVMLGLPNN---D--LR-----------RIASN---QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQ 137 (348)
Q Consensus 77 ~~~~glkV~lGv~~~---~--~~-----------~~a~~---~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~ 137 (348)
+.+.||+|++.+-.. . .. ..-.+ ++...+.++.-+..|.....|.+..++||+-.......
T Consensus 99 a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~ 178 (344)
T d1qnra_ 99 AEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTD 178 (344)
T ss_dssp HHHHTCEEEEESCBSSSTTSHHHHHHHHHCSCTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTH
T ss_pred HHHcCCeeEeeccCCccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchh
Confidence 889999999987421 0 00 00011 12222223333333322346889999999876544566
Q ss_pred HHHHHHHHHHHHHHHcCCCCceEEee
Q 018955 138 YLVPAMRNIQNAINAAGLGNQIKVST 163 (348)
Q Consensus 138 ~Ll~~i~~v~~~L~~~gl~~~I~VsT 163 (348)
.....++.+.+++++..-. -+|+.
T Consensus 179 ~~~~~~~~~~~~ir~~d~~--~~v~~ 202 (344)
T d1qnra_ 179 VIVQWATSVSQYVKSLDSN--HLVTL 202 (344)
T ss_dssp HHHHHHHHHHHHHHHHCSS--SEEEC
T ss_pred hhhHHHHHHHHHHHhhCCC--CEEEE
Confidence 7778888888888877643 34444
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.51 E-value=1.2e-07 Score=87.38 Aligned_cols=227 Identities=8% Similarity=-0.013 Sum_probs=126.6
Q ss_pred HHHHHHhcCCCEEE--EecCCCchhhhh--------hcHHHHHHHHHhhccccCCCceEEEEEecccccCCC------cc
Q 018955 72 EALEALRGSNIEVM--LGLPNNDLRRIA--------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD------NF 135 (348)
Q Consensus 72 ~vl~A~~~~glkV~--lGv~~~~~~~~a--------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~------~~ 135 (348)
.+++.+...||+|. .-+|....+... ...+...+++++.+..| + ..|+.--|-||+.... ..
T Consensus 66 ~~v~~a~~~gi~v~gh~l~w~~~~p~w~~~~~~~~~~~~~~~~~~i~~v~~ry-~-g~i~~WeV~NEp~~~~~~~~~~~~ 143 (320)
T d1xyza_ 66 QLLAFAERNGMQMRGHTLIWHNQNPSWLTNGNWNRDSLLAVMKNHITTVMTHY-K-GKIVEWDVANECMDDSGNGLRSSI 143 (320)
T ss_dssp HHHHHHHHTTCEEEEEEEECSSSCCHHHHTSCCCHHHHHHHHHHHHHHHHHHT-T-TTCSEEEEEESCBCTTSSSBCCCH
T ss_pred HHHHHHHHCCCEEEeeccccCCCCCcchhccccchHHHHHHHHHHHHHHHHHc-C-CCceeEEeecccccCCCccccCcH
Confidence 57888889999986 455654322211 12344566777777766 3 4699999999997642 11
Q ss_pred hHHH--HHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccc
Q 018955 136 AQYL--VPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAI 213 (348)
Q Consensus 136 ~~~L--l~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~ 213 (348)
...+ ..+++.+.++.++..- ..++...+.. .+. .+ ..+ ...++-+...+.....+-++++++++..
T Consensus 144 ~~~~~~~~~~~~a~~~a~~~dp--~a~l~~n~~~-~~~--~~----~~~---~~~~~~~~~~~~~~~~id~iG~q~h~~~ 211 (320)
T d1xyza_ 144 WRNVIGQDYLDYAFRYAREADP--DALLFYNDYN-IED--LG----PKS---NAVFNMIKSMKERGVPIDGVGFQCHFIN 211 (320)
T ss_dssp HHHHHCTTHHHHHHHHHHHHCT--TSEEEEEESS-CSS--SS----HHH---HHHHHHHHHHHHTTCCCCEEEECCEEES
T ss_pred HhhhccHHHHHHHHHHHHHhcc--CcEEEeeccc-ccc--cc----HHH---HHHHHHHHHHHhCcCccceEEecccccC
Confidence 1111 2455555555555432 3455444311 111 00 001 1122222223344445555666665443
Q ss_pred cCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHH
Q 018955 214 AGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNN 293 (348)
Q Consensus 214 ~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~ 293 (348)
..+ . . .++.+...|++.+-.++||+|||.||++........+.+.|..|++.
T Consensus 212 ~~~----------------~--------~----~~~~~~~~l~~~~~~g~pI~iTE~~~~~~~~~~~~~~~~~QA~~~~~ 263 (320)
T d1xyza_ 212 GMS----------------P--------E----YLASIDQNIKRYAEIGVIVSFTEIDIRIPQSENPATAFQVQANNYKE 263 (320)
T ss_dssp SCC----------------H--------H----HHHHHHHHHHHHHHTTCEEEEEEEEEEEETTSCHHHHHHHHHHHHHH
T ss_pred CCC----------------c--------h----HHHHHHHHHHHHHhcCCceeeeccccccCCCCCchhHHHHHHHHHHH
Confidence 210 0 0 12233333444444578999999999876542211456678888888
Q ss_pred HHHHHHhcCCCCCCCCccEEEEEeecC-CCCCC-CCCCCceeeecCCCCeeeec
Q 018955 294 LIQHVKRGSPKRPGRPIETYIFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 294 ~~~~~~~gtp~~~~~~~~~f~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~l 345 (348)
++..+.+ .|. -..+++..+-|. .|.++ ...|.++||++.|++||-..
T Consensus 264 ~~~~~~~----~p~-v~gi~~W~~~D~~~w~~~~~~~~~~~gl~d~d~~pKPAy 312 (320)
T d1xyza_ 264 LMKICLA----NPN-CNTFVMWGFTDKYTWIPGTFPGYGNPLIYDSNYNPKPAY 312 (320)
T ss_dssp HHHHHHH----CTT-EEEEEESCSBTTSCSHHHHSTTEECCSSBCTTSCBCHHH
T ss_pred HHHHHHh----CCC-eeEEEEeecccCCcccCCCCCCCCCCccCCCCCCCCHHH
Confidence 8877652 332 235666666664 47654 35688899999999999643
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=98.40 E-value=1.3e-06 Score=80.83 Aligned_cols=261 Identities=12% Similarity=0.035 Sum_probs=144.3
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe--------cCC---------hHHHHHHhcCCCEEEE--ecCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY--------DPN---------REALEALRGSNIEVML--GLPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY--------~~d---------~~vl~A~~~~glkV~l--Gv~~~ 91 (348)
.+-.+|++..+...++++.++..+++++. |+.+=.= .+. ..+++.+...||+|.. -+|..
T Consensus 10 ~~~~~g~~~~~~~~~~~~~~~y~~~~~~~-fn~~t~~n~~kW~~iEp~~G~~~~~~~D~~v~~a~~~gi~v~gh~l~W~~ 88 (324)
T d1vbua1 10 LNIYIGFAAINNFWSLSDAEKYMEVARRE-FNILTPENQMKWDTIHPERDRYNFTPAEKHVEFAEENDMIVHGHTLVWHN 88 (324)
T ss_dssp TTCEEEEEECTTGGGSTTHHHHHHHHHHH-CSEEEESSTTSHHHHCCBTTEEECHHHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred cCCeEEEEeccccccccccHHHHHHHHHh-cCccccccCCchHHhcCCCCccChHHHHHHHHHHHHCCCEEEEecCcccc
Confidence 45677888877666677777777777754 5555321 111 2578888999999753 35543
Q ss_pred chhhh--------hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-c---c--hHHH-HHHHHHHHHHHHHcCCC
Q 018955 92 DLRRI--------ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-N---F--AQYL-VPAMRNIQNAINAAGLG 156 (348)
Q Consensus 92 ~~~~~--------a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-~---~--~~~L-l~~i~~v~~~L~~~gl~ 156 (348)
..+.. ....+...+|+++.+..| + ..|+.--|-||++... . . ...+ ..+++..-++.++..
T Consensus 89 ~~p~~~~~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~d-- 164 (324)
T d1vbua1 89 QLPGWITGREWTKEELLNVLEDHIKTVVSHF-K-GRVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEAD-- 164 (324)
T ss_dssp SCCHHHHTSCCCHHHHHHHHHHHHHHHHHHT-T-TTCCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHC--
T ss_pred cCCccccccccchHHHHHHHHHHHHHHHHhc-C-CCceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhC--
Confidence 22211 112344566777666665 3 4789999999997642 1 1 1111 244555544444432
Q ss_pred CceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCccccccccCCcee
Q 018955 157 NQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVV 233 (348)
Q Consensus 157 ~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~ 233 (348)
++.++...+- .... + +.- ...+..+++.|.+. .|.++++.|+.+...
T Consensus 165 P~a~l~~n~~-~~~~----~--~~~----~~~~~~~v~~l~~~~~~id~iG~q~h~~~~~~------------------- 214 (324)
T d1vbua1 165 PDAILIYNDY-SIEE----I--NAK----SNFVYNMIKELKEKGVPVDGIGFQMHIDYRGL------------------- 214 (324)
T ss_dssp TTSEEEEEES-SCSS----S--SHH----HHHHHHHHHHHHHTTCCCCEEEECCEEETTCC-------------------
T ss_pred CCCEEEEecC-CCCC----C--cHh----HHHHHHHHHHHHhCCCCcceeEeeeccCcCCC-------------------
Confidence 3456665542 1111 0 000 12233344444332 344444444322210
Q ss_pred ccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCcc-E
Q 018955 234 SDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIE-T 312 (348)
Q Consensus 234 ~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~-~ 312 (348)
+ .+.+...|+.++-.++||+|||.||++........+.+.|+.|+..++..+. ..| .+. +
T Consensus 215 --------~-----~~~~~~~l~~~~~~g~pi~iTE~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~----~~p--~v~gi 275 (324)
T d1vbua1 215 --------N-----YDSFRRNLERFAKLGLQIYITEMDVRIPLSGSEEYYLKKQAEVCAKIFDICL----DNP--AVKAI 275 (324)
T ss_dssp --------C-----HHHHHHHHHHHHTTTCEEEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHH----TST--TEEEE
T ss_pred --------C-----HHHHHHHHHHHHhcCCceeeeeceeccCCCCCChHHHHHHHHHHHHHHHHHH----hcC--CeEEE
Confidence 0 1122333444444678999999999986542101567789999999887774 123 343 3
Q ss_pred EEEEeecC-CCCCC-CCCCCceeeecCCCCeeeec
Q 018955 313 YIFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 313 f~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~l 345 (348)
++..+-|. .|.++ ...+.+.||++.|++||-..
T Consensus 276 ~~W~~~D~~~w~~~~~~~~~~~gL~d~d~~pKPAy 310 (324)
T d1vbua1 276 QFWGFTDKYSWVPGFFKGYGKALLFDENYNPKPCY 310 (324)
T ss_dssp EESCSBTTSCSHHHHSTTEECCSSBCTTSCBCHHH
T ss_pred EEeccccCCccCCCCCCCCCCCccCCCCCCCCHHH
Confidence 44445553 46543 34567899999999999643
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=98.33 E-value=2.1e-05 Score=71.58 Aligned_cols=112 Identities=9% Similarity=0.057 Sum_probs=67.0
Q ss_pred HHHHHHHhhCCCCeEEEecC---------------C-------hHHHHHHhcCCCEEEEecCCCc---------------
Q 018955 50 RDVIALYNQNNIRRMRLYDP---------------N-------REALEALRGSNIEVMLGLPNND--------------- 92 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~~---------------d-------~~vl~A~~~~glkV~lGv~~~~--------------- 92 (348)
+++++.+|+.|++.||+|.. + ..++..|.+.||+|++-+....
T Consensus 42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~ 121 (370)
T d1rh9a1 42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 121 (370)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCccccccccc
Confidence 44578889999999999731 0 2678889999999999875320
Q ss_pred -------hhhhhhcH---HHHHHHHHhhccc--------cCCCceEEEEEecccccCCCc-chHHHHHHHHHHHHHHHHc
Q 018955 93 -------LRRIASNQ---AEANTWVQNNVRN--------FANNVKFKYIAVGNEAKPGDN-FAQYLVPAMRNIQNAINAA 153 (348)
Q Consensus 93 -------~~~~a~~~---~~a~~wv~~~v~~--------~~~~~~I~~I~VGNE~l~~~~-~~~~Ll~~i~~v~~~L~~~ 153 (348)
....-.++ +...++++.-+.. +.....|.+.-++||...... ....+....+.+...+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~ 201 (370)
T d1rh9a1 122 RGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSI 201 (370)
T ss_dssp TTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhh
Confidence 00000111 1122233332322 112346889999999865432 4566677777777777765
Q ss_pred CCCCceEEee
Q 018955 154 GLGNQIKVST 163 (348)
Q Consensus 154 gl~~~I~VsT 163 (348)
.- +-+|+.
T Consensus 202 dp--~~~v~~ 209 (370)
T d1rh9a1 202 DS--NHLLEI 209 (370)
T ss_dssp CC--SSEEEC
T ss_pred CC--CCeEEE
Confidence 43 235543
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.33 E-value=2.1e-05 Score=71.23 Aligned_cols=120 Identities=18% Similarity=0.216 Sum_probs=71.5
Q ss_pred CeeeEEec--CCCCC---CCCHHHHHHHHhhCCCCeEEE---------ecCC--------hHHHHHHhcCCCEEEEecCC
Q 018955 33 AQIGVCYG--MLGNN---LPSKRDVIALYNQNNIRRMRL---------YDPN--------REALEALRGSNIEVMLGLPN 90 (348)
Q Consensus 33 ~~~Gi~Y~--~~~~~---~~s~~~v~~ll~~~~~~~VRl---------Y~~d--------~~vl~A~~~~glkV~lGv~~ 90 (348)
.+.|+|+. +.... ..+++.+..|.+..|++.||+ |..+ ..+++.+.+.||.|+|....
T Consensus 20 ~l~G~n~~~~~~~~~~~~~~~~~~~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~vv~~a~~~Giyvild~h~ 99 (291)
T d1egza_ 20 SFAGNSLFWSNNGWGGEKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHS 99 (291)
T ss_dssp CCEEEEEEECCTTSSGGGGCSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred EEEEEecCCcCCCcCCccccCHHHHHHHHHhcCCCEEEEeccccccCCcccCcHHHHHHHHHHHHHHHHCCCeEeeeecc
Confidence 35688873 22211 234566666655679999999 3333 25888899999999998876
Q ss_pred CchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCC
Q 018955 91 NDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 91 ~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
..... ..+...+..+.-+.+|.....| ..-++||+.... ....+.++.+.+-+++++.+-..
T Consensus 100 ~~~~~---~~~~~~~~w~~la~ryk~~p~v-~~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~ 161 (291)
T d1egza_ 100 HSAEN---NRSEAIRFFQEMARKYGNKPNV-IYEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDN 161 (291)
T ss_dssp SCGGG---GHHHHHHHHHHHHHHHTTSTTE-EEECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSS
T ss_pred CCCcc---cHHHHHHHHHHHHHHhCCCcce-eeeeccCcCCCc-chhhHHHHHHHHHHHHHhcCCCc
Confidence 43322 1222333233333444222345 599999987532 34455666677777777766543
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=98.31 E-value=4.9e-05 Score=68.66 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=76.9
Q ss_pred CeeeEEecCCC-----CCCCCHHHHHHHHhhCCCCeEEE---ecCC----------------hHHHHHHhcCCCEEEEec
Q 018955 33 AQIGVCYGMLG-----NNLPSKRDVIALYNQNNIRRMRL---YDPN----------------REALEALRGSNIEVMLGL 88 (348)
Q Consensus 33 ~~~Gi~Y~~~~-----~~~~s~~~v~~ll~~~~~~~VRl---Y~~d----------------~~vl~A~~~~glkV~lGv 88 (348)
...|+|+.... ....+.+.+..|.+..|++.||+ |... ..++..+.+.||+|+|-+
T Consensus 20 ~l~Gvn~~~~~~~~~~~~~~~~~~~~~l~~~~g~N~VR~~~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~ 99 (293)
T d1tvna1 20 SFAGPSLFWSNTGWGAEKFYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDF 99 (293)
T ss_dssp CCEEEEECCCCTTSSCGGGCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeecCCcCCCcCCCcccCHHHHHHHHHhCCCcEEEEecccccccccccccCcHHHHHHHHHHHHHHHHcCCEEEecC
Confidence 46699974332 12345666666666679999999 3221 146777888999999998
Q ss_pred CCCchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCC
Q 018955 89 PNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 89 ~~~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
...+... ..+...++.++.+..|.....|- .-++||+... .....+-++++.+-+++++.+-..
T Consensus 100 h~~~~~~---~~~~~~~~w~~~a~r~k~~~~V~-~el~NEP~~~-~~~~~~~~~~~~~~~~Ir~~dp~~ 163 (293)
T d1tvna1 100 HSHEAHT---DQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQI-SWVNDIKPYAETVIDKIRAIDPDN 163 (293)
T ss_dssp ECSCGGG---CHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHTTCCSC
T ss_pred ccCCCcc---cHHHHHHHHHHHHHHhCCCCeEE-EEEecccCCC-CcHHHHHHHHHHHHHHHhhcCCCc
Confidence 7654332 23334443444444553334564 9999998643 235667788888888888776543
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=98.27 E-value=2.1e-05 Score=70.32 Aligned_cols=129 Identities=15% Similarity=0.140 Sum_probs=75.0
Q ss_pred eeeEEecCC--CCCCC------CH---HHHHHHHhhCCCCeEEEec--------------------CC-----hHHHHHH
Q 018955 34 QIGVCYGML--GNNLP------SK---RDVIALYNQNNIRRMRLYD--------------------PN-----REALEAL 77 (348)
Q Consensus 34 ~~Gi~Y~~~--~~~~~------s~---~~v~~ll~~~~~~~VRlY~--------------------~d-----~~vl~A~ 77 (348)
..|+||... ..+.+ .. +++++.+++.|++.||++- .. ..+++.|
T Consensus 18 ~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a 97 (350)
T d2c0ha1 18 LSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAA 97 (350)
T ss_dssp EEEEECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccChhhhHHHHHHHHHH
Confidence 579998743 33322 12 3456788999999999941 11 3688899
Q ss_pred hcCCCEEEEecCCCch--------hhhhhcHHHHHHH----HHhhccccCCCceEEEEEecccccCCC------------
Q 018955 78 RGSNIEVMLGLPNNDL--------RRIASNQAEANTW----VQNNVRNFANNVKFKYIAVGNEAKPGD------------ 133 (348)
Q Consensus 78 ~~~glkV~lGv~~~~~--------~~~a~~~~~a~~w----v~~~v~~~~~~~~I~~I~VGNE~l~~~------------ 133 (348)
++.||+|++.+++... .....+.....++ ++.-+..|.....|-+..++||+....
T Consensus 98 ~~~gi~vi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~ 177 (350)
T d2c0ha1 98 QRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFD 177 (350)
T ss_dssp HHTTCEEEEEEEECSCCCTTHHHHHHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGC
T ss_pred HHCCCEEEEEeccccccCCCCcccCcccCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEEecccccccCccccccccccc
Confidence 9999999999875411 0011111111222 222233333334588999999975210
Q ss_pred ---------------cchHHHHHHHHHHHHHHHHcCCCCceEEeee
Q 018955 134 ---------------NFAQYLVPAMRNIQNAINAAGLGNQIKVSTA 164 (348)
Q Consensus 134 ---------------~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~ 164 (348)
.....+...+..+-.++++..-. -+|+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~~v~~~ 221 (350)
T d2c0ha1 178 TRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPG--AMVTVG 221 (350)
T ss_dssp CGGGTTSCTTTTCSCBCHHHHHHHHHHHHHHHHHHCTT--CCEEEE
T ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhCCC--ceEEec
Confidence 02445667777777777776432 345443
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=98.17 E-value=3.5e-05 Score=69.77 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=77.0
Q ss_pred eeeEEecCC--CCCCCCHHHHHHHHhhCCCCeEEEe--------cCC-------hHHHHHHhcCCCEEEEecCCCchhhh
Q 018955 34 QIGVCYGML--GNNLPSKRDVIALYNQNNIRRMRLY--------DPN-------REALEALRGSNIEVMLGLPNNDLRRI 96 (348)
Q Consensus 34 ~~Gi~Y~~~--~~~~~s~~~v~~ll~~~~~~~VRlY--------~~d-------~~vl~A~~~~glkV~lGv~~~~~~~~ 96 (348)
..|||+... ....-+.+++..+.+..|++.||+. ..+ ..+++.+.+.||.|+|.+.......-
T Consensus 26 lrGvn~~~~~~~~~~~~~~~~~~l~~~~G~N~VR~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~~~ 105 (300)
T d7a3ha_ 26 LKGMSSHGLQWYGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP 105 (300)
T ss_dssp CEEEEESCHHHHGGGCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST
T ss_pred EEEEeCCCcccccccCCHHHHHHHHHHcCCCEEEEeeEcCccCcccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCCCC
Confidence 569987532 1223456667777777899999984 223 25777888899999999865321111
Q ss_pred hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCc-chHHHHHHHHHHHHHHHHcCCCC
Q 018955 97 ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN-FAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 97 a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~-~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
....+.+.++.+.-+.+|.....| ..-+.||+..... ..+++.++++.+-+++++.+-..
T Consensus 106 ~~~~~~~~~~w~~ia~ryk~~p~V-~~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~ 166 (300)
T d7a3ha_ 106 NIYKEEAKDFFDEMSELYGDYPNV-IYEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNN 166 (300)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCTTE-EEECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSS
T ss_pred hhhHHHHHHHHHHHHHHhCCCCcc-eeeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCC
Confidence 122333334334444444333345 4899999976543 35678888888888888776543
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=98.08 E-value=3.5e-06 Score=77.48 Aligned_cols=255 Identities=12% Similarity=0.032 Sum_probs=140.9
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEe--------cC-----C----hHHHHHHhcCCCEEEEe--cCCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLY--------DP-----N----REALEALRGSNIEVMLG--LPNN 91 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY--------~~-----d----~~vl~A~~~~glkV~lG--v~~~ 91 (348)
.+-.+|.+.++.. +-. .+..+++++. |+.|-.= .+ + ..+++.+..+||+|.-. +|..
T Consensus 11 ~g~~fG~a~~~~~--l~~-~~y~~~~~~~-fn~~t~~n~~kW~~iep~~g~~~~~~~D~~v~~a~~~gl~v~gh~lvw~~ 86 (312)
T d1fh9a_ 11 AGRDFGFALDPNR--LSE-AQYKAIADSE-FNLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWHS 86 (312)
T ss_dssp TTCEEEEEECGGG--GGS-HHHHHHHHHH-CSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEEEESS
T ss_pred cCCEEEEecChhh--ccC-HHHHHHHHHh-CCcccccccCcchhhcCCCCcCCcHHHHHHHHHHHHCCCEEEEecccccc
Confidence 4557888876553 211 3345555543 6666431 11 1 25778888899998532 5544
Q ss_pred chhhhh------hcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----c-chHHHH--HHHHHHHHHHHHcCCCC
Q 018955 92 DLRRIA------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----N-FAQYLV--PAMRNIQNAINAAGLGN 157 (348)
Q Consensus 92 ~~~~~a------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~-~~~~Ll--~~i~~v~~~L~~~gl~~ 157 (348)
..+... ...+...+.+.+-+..| + +.|+.--|=||++..+ . .....+ .+|+...++.++.. .
T Consensus 87 ~~p~~~~~~~~~~~~~~~~~~i~~v~~ry-~-g~i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~d--P 162 (312)
T d1fh9a_ 87 QLPDWAKNLNGSAFESAMVNHVTKVADHF-E-GKVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAAD--P 162 (312)
T ss_dssp SCCHHHHTCCHHHHHHHHHHHHHHHHHHT-T-TTCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHC--S
T ss_pred cccccccccchHHHHHHHHHHHHHHHHhc-C-CCceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhC--C
Confidence 322211 11233444555555555 4 5699999999998643 1 122222 45666666666553 2
Q ss_pred ceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCccccccccCCceec
Q 018955 158 QIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVS 234 (348)
Q Consensus 158 ~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~ 234 (348)
+.++-..+- +.+.. +.-+ ..+..+++.|... .|-+++..|++.....
T Consensus 163 ~a~l~~n~~-~~~~~------~~~~----~~~~~~i~~l~~~g~~id~ig~q~H~~~~~~~------------------- 212 (312)
T d1fh9a_ 163 TAKLCINDY-NVEGI------NAKS----NSLYDLVKDFKARGVPLDCVGFQSHLIVGQVP------------------- 212 (312)
T ss_dssp SSEEEEEES-SCSSS------SHHH----HHHHHHHHHHHHHTCCCCEEEECCEEETTCCC-------------------
T ss_pred CceEEeecC-ccccc------chhH----HHHHHHHHHHHhCCCCccceeEeecccccCcH-------------------
Confidence 355554431 11110 0011 1223344444333 4667777777544210
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCcc-EE
Q 018955 235 DGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIE-TY 313 (348)
Q Consensus 235 d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~-~f 313 (348)
..+...++ ..+-.++||+|||.||++..... ..+.+.|+.|++.++..+.+ .| .++ +.
T Consensus 213 -------~~~~~~l~-------~~~~~g~pi~iTE~d~~~~~~~~-~~~~~~QA~~~~~~~~~~~~----~~--~v~~v~ 271 (312)
T d1fh9a_ 213 -------GDFRQNLQ-------RFADLGVDVRITELDIRMRTPSD-ATKLATQAADYKKVVQACMQ----VT--RCQGVT 271 (312)
T ss_dssp -------TTHHHHHH-------HHHTTTCEEEEEEEEEEEESSCC-HHHHHHHHHHHHHHHHHHHT----ST--TEEEEE
T ss_pred -------HHHHHHHH-------HHHhcCCceEEeccccccCCCCC-hhHHHHHHHHHHHHHHHHHh----cC--CccEEE
Confidence 11222222 33335789999999999765422 15566788899998877641 23 343 44
Q ss_pred EEEeecC-CCCCC-CCCCCceeeecCCCCeeee
Q 018955 314 IFAMFDE-NGKTG-PEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 314 ~F~~fDe-~wK~~-~~~E~~wGl~~~d~~~ky~ 344 (348)
++.+-|. .|+++ ...+.++|||+.|++||..
T Consensus 272 ~W~~~D~~~W~~~~~~~~~~~~l~d~d~~pKpA 304 (312)
T d1fh9a_ 272 VWGITDKYSWVPDVFPGEGAALVWDASYAKKPA 304 (312)
T ss_dssp ESCSBTTTCSHHHHSTTEECCSSBCTTSCBCHH
T ss_pred EeCCccCCcccCCCCCCCCCCccCCCCCCCCHH
Confidence 5555563 47643 3457889999999999964
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=98.02 E-value=0.00016 Score=66.45 Aligned_cols=127 Identities=15% Similarity=0.133 Sum_probs=73.2
Q ss_pred eeeEEecCCCCCCC--CH--------HHHHHHHhhCCCCeEEE---ecC----------C-------hHHHHHHhcCCCE
Q 018955 34 QIGVCYGMLGNNLP--SK--------RDVIALYNQNNIRRMRL---YDP----------N-------REALEALRGSNIE 83 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~--s~--------~~v~~ll~~~~~~~VRl---Y~~----------d-------~~vl~A~~~~glk 83 (348)
..|||.|.+-+.+. .+ +++++.|++.|++.||| |.. + ..+++.+++.||+
T Consensus 5 ~rGvNlg~w~~~~~~~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~ 84 (340)
T d1ceoa_ 5 KAGINLGGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLG 84 (340)
T ss_dssp SEEEECTTSBSSCSSCCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCE
T ss_pred cceeeechhhhcccccchhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCE
Confidence 36899887644332 11 45678999999999998 321 1 2577888899999
Q ss_pred EEEecCC------Cch--hhhhhc---HHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHHHHHHHHH
Q 018955 84 VMLGLPN------NDL--RRIASN---QAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINA 152 (348)
Q Consensus 84 V~lGv~~------~~~--~~~a~~---~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~ 152 (348)
|+|.+-. .+. ...-.+ .+...+.+++-+..|.....|.++-+.||+... .+..+...++++-+++++
T Consensus 85 vild~H~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~~--~~~~~~~~~~~~~~aIR~ 162 (340)
T d1ceoa_ 85 LVLDMHHAPGYRFQDFKTSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIRE 162 (340)
T ss_dssp EEEEEEECCC--------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCcccccccccccccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCCC--CHHHHHHHHHHHHHHHHh
Confidence 9996621 100 001111 122222222333334323357788999999643 345566666667777776
Q ss_pred cCCCCceEEe
Q 018955 153 AGLGNQIKVS 162 (348)
Q Consensus 153 ~gl~~~I~Vs 162 (348)
.+-..-|-|+
T Consensus 163 ~dp~~~I~v~ 172 (340)
T d1ceoa_ 163 IDSTMWLYIG 172 (340)
T ss_dssp HCSSCCEEEE
T ss_pred cCCCcEEEeC
Confidence 6644334444
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=98.01 E-value=0.0001 Score=66.38 Aligned_cols=121 Identities=11% Similarity=-0.013 Sum_probs=71.3
Q ss_pred eeeEEecCCCCC-CCC--HHHHHHHHhhCCCCeEEEe-------------cCC-------hHHHHHHhcCCCEEEEecCC
Q 018955 34 QIGVCYGMLGNN-LPS--KRDVIALYNQNNIRRMRLY-------------DPN-------REALEALRGSNIEVMLGLPN 90 (348)
Q Consensus 34 ~~Gi~Y~~~~~~-~~s--~~~v~~ll~~~~~~~VRlY-------------~~d-------~~vl~A~~~~glkV~lGv~~ 90 (348)
..|+|....-.. ..+ -+++++.|++.|++.|||- ..+ ..++++|.+.||+|+|-+..
T Consensus 4 ~~G~n~~~~~~~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH~ 83 (325)
T d1vjza_ 4 WRGFNLLEAFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHR 83 (325)
T ss_dssp CEEEECCTTSSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred ccceehhhhhhhcccCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeecc
Confidence 468887655322 222 2677888999999999982 111 25788888999999993321
Q ss_pred ---C-------chhhh---hhcH-HHHHHHHHhhccccCC--CceEEEEEecccccCCC---cchHHHHHHHHHHHHHHH
Q 018955 91 ---N-------DLRRI---ASNQ-AEANTWVQNNVRNFAN--NVKFKYIAVGNEAKPGD---NFAQYLVPAMRNIQNAIN 151 (348)
Q Consensus 91 ---~-------~~~~~---a~~~-~~a~~wv~~~v~~~~~--~~~I~~I~VGNE~l~~~---~~~~~Ll~~i~~v~~~L~ 151 (348)
. ..... ...+ ..+..| +.+...+. ...|.++-+.||+-... ...+.+...++.+-++++
T Consensus 84 ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~w--~~~a~~~~~~~~~i~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~ir 161 (325)
T d1vjza_ 84 APGYSVNKEVEEKTNLWKDETAQEAFIHHW--SFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIR 161 (325)
T ss_dssp ETTEESCTTSCCSSCTTTCHHHHHHHHHHH--HHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHH
T ss_pred ccccccCcccccccccccchhhHHHHHHHH--HHHHHHhcccceeEEeeeccccCCCCccccchhhhhhhHHHHHHHHHh
Confidence 0 00000 0111 122222 33433322 23578999999997542 246667777777777777
Q ss_pred HcCCC
Q 018955 152 AAGLG 156 (348)
Q Consensus 152 ~~gl~ 156 (348)
+.+-.
T Consensus 162 ~~~p~ 166 (325)
T d1vjza_ 162 KIDPE 166 (325)
T ss_dssp HHCTT
T ss_pred ccCCC
Confidence 76543
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=97.93 E-value=0.00035 Score=63.51 Aligned_cols=117 Identities=16% Similarity=0.176 Sum_probs=74.0
Q ss_pred CeeeEEecCCC---CCC----------CCHHHHHHHHhhCCCCeEEEe---------cC----C-------hHHHHHHhc
Q 018955 33 AQIGVCYGMLG---NNL----------PSKRDVIALYNQNNIRRMRLY---------DP----N-------REALEALRG 79 (348)
Q Consensus 33 ~~~Gi~Y~~~~---~~~----------~s~~~v~~ll~~~~~~~VRlY---------~~----d-------~~vl~A~~~ 79 (348)
.+.|||.+... ... ++. +.++.|++.|++.|||- +. + ..++..+.+
T Consensus 5 ~~~Gvn~~G~e~~~~~~~g~~~~~~~~~t~-~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~ 83 (305)
T d1h1na_ 5 QWFGSNESGAEFGSQNLPGVEGKDYIWPDP-NTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQ 83 (305)
T ss_dssp SEEEEEECCTTCSTTSSSCCBTTTBCCCCH-HHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEccccccCCCCCCCccCCCcccCCH-HHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHHHHHHHHHHh
Confidence 35677777653 111 344 44677888999999993 11 2 257778889
Q ss_pred CCCEEEEecCCCch--hhhhhcHHHHHH-HHHhhccccCCC-ceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCC
Q 018955 80 SNIEVMLGLPNNDL--RRIASNQAEANT-WVQNNVRNFANN-VKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGL 155 (348)
Q Consensus 80 ~glkV~lGv~~~~~--~~~a~~~~~a~~-wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl 155 (348)
.||+|+|-+..... .....+.+...+ | +.|...+.+ ..| .+=+-||+- +...+.+.++.+.+-+++++.+-
T Consensus 84 ~gl~vIlD~H~~~~~~~~~~~~~~~~~~~W--~~ia~~~~~~~~v-~~el~NEP~--~~~~~~w~~~~~~~~~~IR~~~~ 158 (305)
T d1h1na_ 84 KGAYAVVDPHNYGRYYNSIISSPSDFETFW--KTVASQFASNPLV-IFDTDNEYH--DMDQTLVLNLNQAAIDGIRSAGA 158 (305)
T ss_dssp TTCEEEEEECCTTEETTEECCCHHHHHHHH--HHHHHTSTTCTTE-EEECCSCCC--SSCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEecccCCcccccccccHHHHHHHH--HHHHHHhCCCCee-EEEeccCCC--CccHHHHHHHHHHHHHHHHhcCC
Confidence 99999999986431 112223333333 3 334444433 345 688999984 23567788888888888888763
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=97.93 E-value=0.00038 Score=63.26 Aligned_cols=122 Identities=13% Similarity=0.068 Sum_probs=71.7
Q ss_pred eeeEEecCCC--CCC------CCHHHHHHHHhhCCCCeEEEe------------------cCC------------hHHHH
Q 018955 34 QIGVCYGMLG--NNL------PSKRDVIALYNQNNIRRMRLY------------------DPN------------REALE 75 (348)
Q Consensus 34 ~~Gi~Y~~~~--~~~------~s~~~v~~ll~~~~~~~VRlY------------------~~d------------~~vl~ 75 (348)
..|||+.... ... .+.+++++.+|+.|++.|||- ..+ ..+++
T Consensus 23 l~GvN~~g~~~~~~~~~~~~~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~ 102 (358)
T d1ecea_ 23 IAGINWFGFETCNYVVHGLWSRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVA 102 (358)
T ss_dssp CEEEECCCBTTTTCSCTTTTTSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHH
T ss_pred EEEEccCcccccccccccCCccHHHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHH
Confidence 4599974332 111 235788999999999999981 111 24667
Q ss_pred HHhcCCCEEEEecCCCchh----hh---hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCC-----cchHHHHHHH
Q 018955 76 ALRGSNIEVMLGLPNNDLR----RI---ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD-----NFAQYLVPAM 143 (348)
Q Consensus 76 A~~~~glkV~lGv~~~~~~----~~---a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~-----~~~~~Ll~~i 143 (348)
.+++.||+|+|-+...... .. ....+...+.++.-+..|.....|.++-+.||+.... ........++
T Consensus 103 ~a~~~Gl~Vildlh~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~ 182 (358)
T d1ecea_ 103 YAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAA 182 (358)
T ss_dssp HHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHH
T ss_pred HHHHCCCceeeecccccccCCCccccCChHHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCCccchhhhHHHHH
Confidence 7888999999977642110 00 0122222222222233333345688999999987532 1345566666
Q ss_pred HHHHHHHHHcCC
Q 018955 144 RNIQNAINAAGL 155 (348)
Q Consensus 144 ~~v~~~L~~~gl 155 (348)
+.+.+++++.+-
T Consensus 183 ~~~~~~Ir~~d~ 194 (358)
T d1ecea_ 183 ERAGNAVLSVNP 194 (358)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHhhCC
Confidence 777777776653
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=97.87 E-value=3.5e-05 Score=70.24 Aligned_cols=247 Identities=9% Similarity=0.015 Sum_probs=131.9
Q ss_pred cCCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEec--------C-----C----hHHHHHHhcCCCEEEE--ecCC
Q 018955 30 TTSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYD--------P-----N----REALEALRGSNIEVML--GLPN 90 (348)
Q Consensus 30 ~~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~--------~-----d----~~vl~A~~~~glkV~l--Gv~~ 90 (348)
+.+-++|.+.+... +. -.+..+++++. |+.+-.=. + + ..+++.+...||+|.- -+|.
T Consensus 10 ~~g~~fG~a~~~~~--l~-~~~y~~~~~~~-fn~~t~~n~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~v~gh~l~w~ 85 (302)
T d1nq6a_ 10 AKGRYFGAAVAANH--LG-EAAYASTLDAQ-FGSVTPENEMKWDAVESSRNSFSFSAADRIVSHAQSKGMKVRGHTLVWH 85 (302)
T ss_dssp TTTCEEEEEECGGG--TT-SHHHHHHHHHH-CSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEEEES
T ss_pred hcCCEEEEecChhh--cC-CHHHHHHHHHh-CCeeeeccCccchhhcCCCCcCCcHHHHHHHHHHHHCCCEEEeeccccc
Confidence 45667787776433 22 23345555544 55555421 1 1 2578888899999852 3564
Q ss_pred Cchhhh------hhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCc-------chHHHH--HHHHHHHHHHHHcCC
Q 018955 91 NDLRRI------ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN-------FAQYLV--PAMRNIQNAINAAGL 155 (348)
Q Consensus 91 ~~~~~~------a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~-------~~~~Ll--~~i~~v~~~L~~~gl 155 (348)
...+.. ....+...+++++.+..| + ..|..--|-||++..+. .....+ .+|+..-+..++..
T Consensus 86 ~~~p~w~~~~~~~~~~~~~~~~i~~v~~ry-~-g~i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~d- 162 (302)
T d1nq6a_ 86 SQLPGWVSPLAATDLRSAMNNHITQVMTHY-K-GKIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVD- 162 (302)
T ss_dssp TTCCTTTTTSCHHHHHHHHHHHHHHHHHHT-T-TSCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHC-
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHc-C-CCcceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhC-
Confidence 332211 122345566777666666 3 47999999999976431 121111 24444444444433
Q ss_pred CCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhh-c--CCcccccccccccccCCCCCCccccccccCCce
Q 018955 156 GNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNE-N--RSPLLLNLYPYFAIAGNRQISLDYALFRSQQTV 232 (348)
Q Consensus 156 ~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~-~--~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~ 232 (348)
++.++-..+- +... .+..+ ..+..+++.|.+ . .|-++++.|++.....
T Consensus 163 -P~a~l~~nd~-~~~~------~~~~~----~~~~~~i~~l~~~~~~id~iG~q~H~~~~~~~----------------- 213 (302)
T d1nq6a_ 163 -ADAKLCYNDY-NTDG------QNAKS----NAVYEMVKDFKQRGVPIDCVGFQSHFNSNSPV----------------- 213 (302)
T ss_dssp -TTSEEEEEES-SCSS------SSHHH----HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCC-----------------
T ss_pred -CCCceeeccc-cccc------Cchhh----HHHHHHHHHHHhccCCcceeEEEeccCCCCCC-----------------
Confidence 3456654431 1111 01111 122233333333 2 4555666665432210
Q ss_pred eccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCcc-
Q 018955 233 VSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIE- 311 (348)
Q Consensus 233 ~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~- 311 (348)
. ..+ +..|+.++-.++||+|||.+++ .+.+.|+.++++++..+. ..| .+.
T Consensus 214 ~--------~~~-------~~~l~~~~~~g~pi~iTE~d~~--------~~~~~Qa~~~~~~~~~~~----~~p--~v~~ 264 (302)
T d1nq6a_ 214 P--------SDF-------QANLQRFADLGVDVQITELDIE--------GSGSAQAANYTKVVNACL----AVT--RCTG 264 (302)
T ss_dssp C--------TTH-------HHHHHHHHTTTCEEEEEEEEEC--------CCHHHHHHHHHHHHHHHH----TST--TEEE
T ss_pred h--------HHH-------HHHHHHHHhcCCceEEecCCCC--------CCcHHHHHHHHHHHHHHH----ccC--CceE
Confidence 0 111 1222333335789999999998 456778888888887764 233 343
Q ss_pred EEEEEeecC-CCCCCCCCCCceeeecCCCCeeeec
Q 018955 312 TYIFAMFDE-NGKTGPEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 312 ~f~F~~fDe-~wK~~~~~E~~wGl~~~d~~~ky~l 345 (348)
+.+..+-|. .|++ +.+.|||+.|++||-..
T Consensus 265 i~~W~~~D~~sw~~----~~~~~L~d~d~~pKPAy 295 (302)
T d1nq6a_ 265 ITVWGVTDKYSWRS----GGTPLLFDGDYNKKPAY 295 (302)
T ss_dssp EEESCSCGGGCTTG----GGCCSSBCTTSCBCHHH
T ss_pred EEEeCCccCCCcCC----CCCCeeECCCCCCCHHH
Confidence 334444442 4665 45789999999999643
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=97.79 E-value=0.00017 Score=66.26 Aligned_cols=216 Identities=13% Similarity=0.045 Sum_probs=116.2
Q ss_pred HHHHHHhcCCCEEEE--ecCCCchhhhh------------hcHHHHHHHHHhhccccCCCceEEEEEecccccCCC----
Q 018955 72 EALEALRGSNIEVML--GLPNNDLRRIA------------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGD---- 133 (348)
Q Consensus 72 ~vl~A~~~~glkV~l--Gv~~~~~~~~a------------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~---- 133 (348)
.++..+.+.||+|.- -||....+... .-.+...+.+++-+..| + .+|+.--|=||++...
T Consensus 65 ~~v~~a~~~gi~v~gh~lvw~~~~P~W~~~~~~~~~~~~~~~~~~~~~~i~~v~~ry-~-g~v~~WdV~NEp~~~~~~~~ 142 (330)
T d1n82a_ 65 RIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQGHFVSRDVLLERMKCHISTVVRRY-K-GKIYCWDVINEAVADEGDEL 142 (330)
T ss_dssp HHHHHHHHTTCEEEEEEEEESSSCCGGGGBCSSSSBCCHHHHHHHHHHHHHHHHHHH-T-TTCCEEEEEESCBCSSSSCS
T ss_pred HHHHHHHHCCCEEEEeecccCCCCCchhccCCcCCcCCHHHHHHHHHHHHHHHHHhc-C-CCceeEEEeccccccCcccc
Confidence 577888889998864 35644333322 11233445566555555 3 5799999999997542
Q ss_pred --c-c------hHHHHHHHHHHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CC
Q 018955 134 --N-F------AQYLVPAMRNIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RS 201 (348)
Q Consensus 134 --~-~------~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d 201 (348)
. . ...+..+.+.+|++ . ++.++-..+-. .. ...-+ ..+..+++.|.+. .|
T Consensus 143 ~~~~~~~~~~~~~~~~~af~~ar~~----~--P~a~l~~n~~~-~~-------~~~~~----~~~~~~v~~l~~~g~~id 204 (330)
T d1n82a_ 143 LRPSKWRQIIGDDFMEQAFLYAYEA----D--PDALLFYNDYN-EC-------FPEKR----EKIFALVKSLRDKGIPIH 204 (330)
T ss_dssp BCCCHHHHHHCTTHHHHHHHHHHHH----C--TTSEEEEEESS-TT-------SHHHH----HHHHHHHHHHHHTTCCCC
T ss_pred ccCChhhhccChHHHHHHHHHHHHh----C--CcceEeecccc-cc-------cccch----hhHHHHHHHHHhCCCCcc
Confidence 1 1 12233333444442 2 24566554321 11 00001 1223344444443 45
Q ss_pred cccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC---
Q 018955 202 PLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD--- 278 (348)
Q Consensus 202 ~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~--- 278 (348)
-++++.|.+.... + ++.+...|++++-.+++|.|||.+|++.+..
T Consensus 205 giG~q~h~~~~~~---------------------------~-----~~~i~~~l~~~~~~g~~i~iTE~d~~~~~~~~~~ 252 (330)
T d1n82a_ 205 GIGMQAHWSLTRP---------------------------S-----LDEIRAAIERYASLGVVLHITELDVSMFEFHDRR 252 (330)
T ss_dssp EEEECCEEESSSS---------------------------C-----HHHHHHHHHHHHTTTCEEEEEEEEEESSCTTCCC
T ss_pred eEEEeecCccCcC---------------------------C-----HHHHHHHHHHHHhcCCceeeccccccccCccccc
Confidence 5555555322110 1 1223334455555678999999999876531
Q ss_pred C--CCCCH---HHHHHHHHHHHHHHHhcCCCCCCCCcc-EEEEEeec-CCCCCC---CCCCCceeeecCCCCeeee
Q 018955 279 G--ALTNV---DNARTYNNNLIQHVKRGSPKRPGRPIE-TYIFAMFD-ENGKTG---PEIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 279 ~--~vas~---~na~~y~~~~~~~~~~gtp~~~~~~~~-~f~F~~fD-e~wK~~---~~~E~~wGl~~~d~~~ky~ 344 (348)
. ..++. +.|+.|++.++..+.+. .| .+. +.+..+-| ..|.++ ...+.++|||+.|++||..
T Consensus 253 ~~~~~~~~~~~~~QA~~~~~~~~~~~~~---~p--~v~gi~~Wg~~D~~sW~~~~~~~~~~~~~~L~d~d~~pKPA 323 (330)
T d1n82a_ 253 TDLAAPTSEMIERQAERYGQIFALFKEY---RD--VIQSVTFWGIADDHTWLDNFPVHGRKNWPLLFDEQHKPKPA 323 (330)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHT---TT--TEEEEEESCSBTTSCGGGTSSSTTCCCCCSSBCTTSCBCHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHc---CC--CeeEEEEecCccCCccCCCCCCCCCcCCCCCCCCCCCCCHH
Confidence 1 11333 56888888888766421 22 343 33445555 246654 2478899999999999953
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=97.47 E-value=0.00041 Score=64.61 Aligned_cols=259 Identities=13% Similarity=0.051 Sum_probs=135.3
Q ss_pred eeeEEecCCC---CCCCCHHHHHHHHhhCCCCeEEEe--------cC-----C----hHHHHHHhcCCCEEE--EecCCC
Q 018955 34 QIGVCYGMLG---NNLPSKRDVIALYNQNNIRRMRLY--------DP-----N----REALEALRGSNIEVM--LGLPNN 91 (348)
Q Consensus 34 ~~Gi~Y~~~~---~~~~s~~~v~~ll~~~~~~~VRlY--------~~-----d----~~vl~A~~~~glkV~--lGv~~~ 91 (348)
.+|.+-++.. .+..+-.+..+++++. |+.|=.= .+ + ..++..++..||+|. .-+|..
T Consensus 18 ~~G~av~~~~~~~~~~~~~~~~~~~~~~~-fn~~t~eN~mKW~~iep~~G~~nf~~~D~~v~~a~~~gi~v~GH~lvW~~ 96 (364)
T d1us3a2 18 PIGVAVSNTDSATYNLLTNSREQAVVKKH-FNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWATENNMTVHGHALVWHS 96 (364)
T ss_dssp CEEEEEBCTTCTTTBTTTCHHHHHHHHHH-CSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEEECC
T ss_pred cEEEEecCccccccccccCHHHHHHHHHh-CCeeeecccCChHHhcCCCCccCcHHHHHHHHHHHHCCCEEEEeecCCCc
Confidence 4677765543 2334456666777754 6665321 00 1 257888889999986 445543
Q ss_pred ch--hh--------hhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCc--------c---------hHHHHHHHH
Q 018955 92 DL--RR--------IASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN--------F---------AQYLVPAMR 144 (348)
Q Consensus 92 ~~--~~--------~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~--------~---------~~~Ll~~i~ 144 (348)
.. +. ...-.....++|++-+..|....+|+..-|=||++..+. . ...+..+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~ 176 (364)
T d1us3a2 97 DYQVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQ 176 (364)
T ss_dssp GGGSCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHH
T ss_pred ccCCccccccCCccHHHHHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHH
Confidence 11 11 111123445677766666632257999999999975320 0 112333444
Q ss_pred HHHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhc---CCcccccccccccccCCCCCCc
Q 018955 145 NIQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNEN---RSPLLLNLYPYFAIAGNRQISL 221 (348)
Q Consensus 145 ~v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~---~d~~~vN~yPff~~~~~~~i~~ 221 (348)
.+|++ ...+++-..+- +.+.. +.. ...+..+++.|.+. .|-++++.|++....
T Consensus 177 ~Ar~~------~p~a~l~~ndy-~~~~~------~~~----~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p------- 232 (364)
T d1us3a2 177 TARAA------DPAVILYYNDY-NIEQN------NAK----TTKMVDMVKDFQARSIPIDGVGFQMHVCMNYP------- 232 (364)
T ss_dssp HHHHH------CTTSEEEEEES-STTSC------SHH----HHHHHHHHHHHHHTTCCCCEEEECCEEESSCS-------
T ss_pred HHHHh------ccccceeeccc-ccccc------chh----hhHHHHHHHHHHhCCCccccceeeeeccCCCC-------
Confidence 44432 12344443331 11110 001 12334455555554 666777777754321
Q ss_pred cccccccCCceeccCCcchhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC-----C---CCC---CHHHHHHH
Q 018955 222 DYALFRSQQTVVSDGSLSYRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD-----G---ALT---NVDNARTY 290 (348)
Q Consensus 222 ~~a~f~~~~~~~~d~~~~y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~-----~---~va---s~~na~~y 290 (348)
+ ++.+..+|++++-.+++|+|||.+|.+.... + ... +...|+.|
T Consensus 233 --------------------~-----~~~i~~~l~~~~~~g~~I~iTEldi~~~~~~~~~~~~~~~~~~~~~~~~~QA~~ 287 (364)
T d1us3a2 233 --------------------S-----IANISAAMKKVVDLGLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKR 287 (364)
T ss_dssp --------------------C-----HHHHHHHHHHHHTTTCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHH
T ss_pred --------------------C-----HHHHHHHHHHHHhcCCeeEEEeeeEecccCccccccccccCCCChHHHHHHHHH
Confidence 0 1223344555555678999999999775531 0 001 23456777
Q ss_pred HHHHHHHHHhcCCCCCCCCccEEEEE-eecC-CCCCC-------CCCCCceeeecCCCCeeeec
Q 018955 291 NNNLIQHVKRGSPKRPGRPIETYIFA-MFDE-NGKTG-------PEIERHWGLFAPTRQPRYQI 345 (348)
Q Consensus 291 ~~~~~~~~~~gtp~~~~~~~~~f~F~-~fDe-~wK~~-------~~~E~~wGl~~~d~~~ky~l 345 (348)
++.+++.+.+- |... .+.-+.|. +-|. .|+++ ...+.++|||+.|.+||-..
T Consensus 288 ~~~~~~~~~~~-~~~~--~~~~vt~Wg~~D~~sW~~~~~~~~~~~~~~~~~lL~d~d~~pKPAy 348 (364)
T d1us3a2 288 YCDVVKAYLDT-VPVN--QRGGISVWGTTDANTWLDGLYREQFEDEKISWPLLFDNNYNDKPAL 348 (364)
T ss_dssp HHHHHHHHHHH-SCGG--GEEEEEESCSBGGGCHHHHHTTTTTTTCCCCCCSSBCTTSCBCHHH
T ss_pred HHHHHHHHHhc-cccc--ccceEEEecCCcCCccccCCCCCcccccccCCCccCCCCCCCCHHH
Confidence 78887766421 1111 12222232 2232 35531 24688899999999999643
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=97.32 E-value=0.0068 Score=57.70 Aligned_cols=278 Identities=17% Similarity=0.176 Sum_probs=137.4
Q ss_pred HHHHHHHhhCCCCeEEEec------------CC-------hHHHHHHhcCCCEEEEecCCCchhh-hhh-----cHHHHH
Q 018955 50 RDVIALYNQNNIRRMRLYD------------PN-------REALEALRGSNIEVMLGLPNNDLRR-IAS-----NQAEAN 104 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY~------------~d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a~-----~~~~a~ 104 (348)
+++++|+++.|++..|+== .+ .++|..|.+.||+.++.+..-+++. +.. +++.+.
T Consensus 61 ~eDi~l~~~lG~~~yRfSi~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~dlP~~l~~~gGw~n~~~~~ 140 (447)
T d1e4ia_ 61 EEDIRLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDAGGWGNRRTIQ 140 (447)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTTTTSSTHHHH
T ss_pred HHHHHHHHHhCCCEEEccCCHHHcccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeeccccchhhhcCCCCCCHHHHH
Confidence 6789999999999998641 12 3789999999999999999866553 211 222221
Q ss_pred HH---HHhhccccCCCceEEEEEecccccC--------C----C-cch-------HHHHHHHHHHHHHHHHcCCCCceEE
Q 018955 105 TW---VQNNVRNFANNVKFKYIAVGNEAKP--------G----D-NFA-------QYLVPAMRNIQNAINAAGLGNQIKV 161 (348)
Q Consensus 105 ~w---v~~~v~~~~~~~~I~~I~VGNE~l~--------~----~-~~~-------~~Ll~~i~~v~~~L~~~gl~~~I~V 161 (348)
.. ...-+..+ +++|+.-+-=||+.. . + ... ..++.+-....+++++.+-. -+|
T Consensus 141 ~F~~Ya~~v~~~f--gdrV~~W~TiNEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~AHa~a~~~~~~~~~~--~~v 216 (447)
T d1e4ia_ 141 AFVQFAETMFREF--HGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTS--GQI 216 (447)
T ss_dssp HHHHHHHHHHHHT--BTTBCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCS--SEE
T ss_pred HHHHHHHHHHHHh--CCccceEEecCCCceeeecccccccccCcccchhhHHHhHHHHHHHHHHHHHHHHHhhhc--cee
Confidence 11 11112233 467888888899642 0 1 011 22333333333444544433 467
Q ss_pred eeeeeccccccccCCCCc-------------------ccccCccchhhH--------------HHHHHhhcCCccccccc
Q 018955 162 STAIETGALGESFPPSRG-------------------SFKQDYRPILDP--------------LIRFLNENRSPLLLNLY 208 (348)
Q Consensus 162 sT~~~~~~~~~s~pPs~~-------------------~f~~d~~~~~~~--------------~l~fL~~~~d~~~vN~y 208 (348)
+.+.+...... ..|+.. .+..+....+++ -++.+....||+++|.|
T Consensus 217 Gi~~~~~~~~p-~~~~~~~~~aa~~~~~~~~~~fldpl~~G~yP~~~~~~~~~~~~~~~~~~~d~~~i~~~~DFiGiNyY 295 (447)
T d1e4ia_ 217 GIAPNVSWAVP-YSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYY 295 (447)
T ss_dssp EEECBCCCEEE-SSSCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHHHTTCCCCCCTTHHHHHTCCCSEEEEECC
T ss_pred eeeeccccccC-CCCchhHHHHHHHHHHHhcccccchhhcCcCcHHHHHHHHhcCCccCCCHHHHHhhcCCccceeeccc
Confidence 77665432211 011100 000010011111 11224456799999999
Q ss_pred ccccccCCCCCCccccccccCCceeccCCcc-hhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC--CCCCCC--
Q 018955 209 PYFAIAGNRQISLDYALFRSQQTVVSDGSLS-YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG--DGALTN-- 283 (348)
Q Consensus 209 Pff~~~~~~~i~~~~a~f~~~~~~~~d~~~~-y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~--~~~vas-- 283 (348)
.-.--..++..+........++....+-+.. |-.-+..++.. +.+ +.++||+|||.|++.... .+.+-.
T Consensus 296 ~~~~v~~~~~~~~~~~~~~~~~~~~td~gw~i~P~gl~~~L~~----~~~--~~~~PI~ITENG~a~~d~~~~g~i~D~~ 369 (447)
T d1e4ia_ 296 SMSVNRFNPEAGFLQSEEINMGLPVTDIGWPVESRGLYEVLHY----LQK--YGNIDIYITENGACINDEVVNGKVQDDR 369 (447)
T ss_dssp CCEEEEECTTSTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHH----GGG--GCSCCEEEEEECCCCCCCCBTTBCCCHH
T ss_pred cceeeecCcccccccccCCCCCCcccccceeecchhHHHHHHH----HHH--hcCCceEEecCCCCCCCcccCCccCCHH
Confidence 6432221111000000000011112222322 11112112211 122 457899999999998764 221112
Q ss_pred -HHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC-----CCeeee
Q 018955 284 -VDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT-----RQPRYQ 344 (348)
Q Consensus 284 -~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d-----~~~ky~ 344 (348)
.+--+.+++.+.+.++.|.+.+ .||+-++.| ++-=..+..+.|||+.-| |+||-+
T Consensus 370 Ri~yl~~hL~~~~~Ai~dGv~V~-----GY~~WSl~D-nfEW~~Gy~~RFGL~~VD~~t~~R~pK~S 430 (447)
T d1e4ia_ 370 RISYMQQHLVQVHRTIHDGLHVK-----GYMAWSLLD-NFEWAEGYNMRFGMIHVDFRTQVRTPKQS 430 (447)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEE-----EEEEECSBC-CCCGGGGGGSCCCSEEECTTTCCEEECHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEE-----EEeecCcch-hcChhhcccCcCceEEEcCCCCCeeeccH
Confidence 2233445555555555566543 477777887 333223478899999554 556643
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=97.10 E-value=0.0013 Score=59.40 Aligned_cols=95 Identities=8% Similarity=-0.011 Sum_probs=56.1
Q ss_pred CCCeeeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEecC----------------C--hHHHHHHhcCCCEEE--EecCC
Q 018955 31 TSAQIGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYDP----------------N--REALEALRGSNIEVM--LGLPN 90 (348)
Q Consensus 31 ~~~~~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~~----------------d--~~vl~A~~~~glkV~--lGv~~ 90 (348)
.+-++|-+..... +.+ ++..+++.+. |+.+ +... + ..++..+...||+|. .-+|.
T Consensus 11 ~g~~fG~av~~~~--l~d-~~y~~~~~~~-fn~~-t~~n~~kW~~~ep~~g~~~~~~~D~~v~~a~~~gi~v~gh~l~w~ 85 (302)
T d1v0la_ 11 SGRYFGTAIASGR--LSD-STYTSIAGRE-FNMV-TAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHTLAWH 85 (302)
T ss_dssp TTCEEEEEECGGG--TTC-HHHHHHHHHH-CSEE-EESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHTTCEEEEEEEECS
T ss_pred cCCeEEEecCccc--cCC-HHHHHHHHhh-CCee-eecccCchhhhCCCCCcCChHHHHHHHHHHHHCCCEEEEeccccc
Confidence 4567798886653 322 3345555443 5555 2221 1 257778888999873 33565
Q ss_pred Cchhhhh------hcHHHHHHHHHhhccccCCCceEEEEEecccccCC
Q 018955 91 NDLRRIA------SNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 132 (348)
Q Consensus 91 ~~~~~~a------~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~ 132 (348)
...+... ...+...+++.+.+..|. ..|+.--|=||++..
T Consensus 86 ~~~p~w~~~~~~~~~~~~~~~~i~~~~~ry~--g~i~~WdV~NEp~~~ 131 (302)
T d1v0la_ 86 SQQPGWMQSLSGSALRQAMIDHINGVMAHYK--GKIVQWDVVNEAFAD 131 (302)
T ss_dssp SSCCHHHHTCCHHHHHHHHHHHHHHHHHHTT--TTCSEEEEEECCBCS
T ss_pred hhccccccccCcHHHHHHHHHHHHHHHhhcC--CCceEEEEecccccC
Confidence 4222111 123456667777777763 478999999999764
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=97.00 E-value=0.031 Score=50.67 Aligned_cols=129 Identities=18% Similarity=0.206 Sum_probs=73.9
Q ss_pred CeeeEEecCCC--CCCCCHHHHHHHHhhCCCCeEEE--------ecCC-------hHHHHHHhcCCCEEEEecCCC---c
Q 018955 33 AQIGVCYGMLG--NNLPSKRDVIALYNQNNIRRMRL--------YDPN-------REALEALRGSNIEVMLGLPNN---D 92 (348)
Q Consensus 33 ~~~Gi~Y~~~~--~~~~s~~~v~~ll~~~~~~~VRl--------Y~~d-------~~vl~A~~~~glkV~lGv~~~---~ 92 (348)
...|||+.... .+.-+.+++..|.+..|++.||+ |..+ ..+++.|.+.||.|+|=+-.. .
T Consensus 36 ~lrGv~~~~~~w~~~~~~~~~~~~l~~~~G~N~VRlp~~~~~~~~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~ 115 (357)
T d1g01a_ 36 QLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGD 115 (357)
T ss_dssp CCEEEEESCHHHHGGGCSHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSC
T ss_pred EEEEEecCcchhcccccCHHHHHHHHHhcCCCEEEEeeeecCCCCccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCC
Confidence 45688865321 12334566666767779999998 4444 257888899999999976421 1
Q ss_pred hhhhhhcHHHHHHHHHhhccccC--CCceEEEEEecccccCCCc----------chHHHHHHHHHHHHHHHHcCCCCceE
Q 018955 93 LRRIASNQAEANTWVQNNVRNFA--NNVKFKYIAVGNEAKPGDN----------FAQYLVPAMRNIQNAINAAGLGNQIK 160 (348)
Q Consensus 93 ~~~~a~~~~~a~~wv~~~v~~~~--~~~~I~~I~VGNE~l~~~~----------~~~~Ll~~i~~v~~~L~~~gl~~~I~ 160 (348)
...-. ......-|- .-..+|. |...+...=+=||+..... ....+.++.+.+-.++++.+ ...|-
T Consensus 116 ~~~~~-~~~~~~~W~-~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~ii 192 (357)
T d1g01a_ 116 PRADV-YSGAYDFFE-EIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMIL 192 (357)
T ss_dssp TTSGG-GTTHHHHHH-HHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEE
T ss_pred CChhh-hhhhHHHHH-HHHHHHhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcC-CceEE
Confidence 11000 011222342 1222221 3334446778899865321 24567788888888887776 33465
Q ss_pred Eeee
Q 018955 161 VSTA 164 (348)
Q Consensus 161 VsT~ 164 (348)
|.+.
T Consensus 193 v~~~ 196 (357)
T d1g01a_ 193 VGNP 196 (357)
T ss_dssp ECCH
T ss_pred EecC
Confidence 5543
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=96.99 E-value=0.018 Score=52.97 Aligned_cols=103 Identities=16% Similarity=0.233 Sum_probs=59.2
Q ss_pred HHHHHHHhhCCCCeEEEe---cC---------C-------hHHHHHHhcCCCEEEEecCCCc------hh---hhhhcHH
Q 018955 50 RDVIALYNQNNIRRMRLY---DP---------N-------REALEALRGSNIEVMLGLPNND------LR---RIASNQA 101 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY---~~---------d-------~~vl~A~~~~glkV~lGv~~~~------~~---~~a~~~~ 101 (348)
+++++.+|+.||+.|||= .. | ..|+..+.+.||+|+|-+..+. .+ ......+
T Consensus 64 ~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~~~~~~~~~~~~ 143 (380)
T d1edga_ 64 KQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSKK 143 (380)
T ss_dssp HHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcccHHHhcCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccCCcccCcHHHHH
Confidence 667889999999999993 11 1 2577778899999999775321 11 1111111
Q ss_pred -HHHHHHHhhccccCCC-ceEEEEEecccccCCCc---------------chHHHHHHHHHHHHHHHHcC
Q 018955 102 -EANTWVQNNVRNFANN-VKFKYIAVGNEAKPGDN---------------FAQYLVPAMRNIQNAINAAG 154 (348)
Q Consensus 102 -~a~~wv~~~v~~~~~~-~~I~~I~VGNE~l~~~~---------------~~~~Ll~~i~~v~~~L~~~g 154 (348)
...-| +.|...+.+ ..+-..-+-||+...+. ....|..+.+....++++.|
T Consensus 144 ~~~~~W--~qiA~~fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~ 211 (380)
T d1edga_ 144 YITSVW--AQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATG 211 (380)
T ss_dssp HHHHHH--HHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHH--HHHHHhhcCCCceEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11223 334433332 23446778999864321 12335555566666777765
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=96.91 E-value=0.035 Score=52.22 Aligned_cols=270 Identities=18% Similarity=0.215 Sum_probs=134.4
Q ss_pred HHHHHHHHhhCCCCeEEEec------------CC-------hHHHHHHhcCCCEEEEecCCCchhhhh------hcHHHH
Q 018955 49 KRDVIALYNQNNIRRMRLYD------------PN-------REALEALRGSNIEVMLGLPNNDLRRIA------SNQAEA 103 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~------------~d-------~~vl~A~~~~glkV~lGv~~~~~~~~a------~~~~~a 103 (348)
.++++++|++.|++..|+== .+ .++|.+|.+.||+.+++++.-+++..- .+++.+
T Consensus 56 y~eDi~ll~~lG~~~yRfsi~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hfd~P~~l~~~gGw~~~~~~ 135 (426)
T d1ug6a_ 56 YEEDIALMQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETA 135 (426)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSHHHH
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHcccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEecccccchhhhccCccCCHHHH
Confidence 36789999999999999751 12 379999999999999999986554311 122222
Q ss_pred HHH---HHhhccccCCCceEEEEEecccccC------------CC--c------chHHHHHHHHHHHHHHHHcCCCCceE
Q 018955 104 NTW---VQNNVRNFANNVKFKYIAVGNEAKP------------GD--N------FAQYLVPAMRNIQNAINAAGLGNQIK 160 (348)
Q Consensus 104 ~~w---v~~~v~~~~~~~~I~~I~VGNE~l~------------~~--~------~~~~Ll~~i~~v~~~L~~~gl~~~I~ 160 (348)
... ...-...+ ++.|+..+-=||+.. .+ + ....++.+-..+.+++++.+-. .+.
T Consensus 136 ~~F~~Ya~~v~~~f--gd~V~~w~TiNEP~~~~~~gy~~G~~ppg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~-~~~ 212 (426)
T d1ug6a_ 136 FAFAEYAEAVARAL--ADRVPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGAR-RVG 212 (426)
T ss_dssp HHHHHHHHHHHHHH--TTTCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCS-EEE
T ss_pred HHHHHHHHHHHHHh--CcccceEEEecCCeeEeeeccccCccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCC-cee
Confidence 211 11112233 345666555588731 11 1 1222333434444556655432 233
Q ss_pred Eeeeeec----------------------cccccccCCCCcccccCc-cchhhHHHHHHhhcCCcccccccccccccCC-
Q 018955 161 VSTAIET----------------------GALGESFPPSRGSFKQDY-RPILDPLIRFLNENRSPLLLNLYPYFAIAGN- 216 (348)
Q Consensus 161 VsT~~~~----------------------~~~~~s~pPs~~~f~~d~-~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~- 216 (348)
++..... .++...||++. ++... .+....-++.+....||+++|-|+=+--...
T Consensus 213 ~~~~~~~~~~~~~~~~~~a~~~~~~~f~d~i~~g~yp~~~--~~~~~~~~~~~~d~~~ik~~~DFiGiNyY~~~~v~~~~ 290 (426)
T d1ug6a_ 213 IVLNFAPAYGEDPEAVDVADRYHNRFFLDPILGKGYPESP--FRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGT 290 (426)
T ss_dssp EEEEECCEECSCHHHHHHHHHHHTHHHHHHHTTSCSCSCC--SSSCCCCCCCTTHHHHHTCCCSEEEEEESCCEEEEECC
T ss_pred EEeccCCCCccchHHHHHHHHHhhhhcchHhhCCcchhHH--hhcccCCCcchhHHHHhcCCcCccceeeEEeEEEecCC
Confidence 3322110 01122344331 11110 1222222344567889999999973322211
Q ss_pred CCCCccccccccCCceeccCCcc-hhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC---CCCCC---HHHHHH
Q 018955 217 RQISLDYALFRSQQTVVSDGSLS-YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD---GALTN---VDNART 289 (348)
Q Consensus 217 ~~i~~~~a~f~~~~~~~~d~~~~-y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~---~~vas---~~na~~ 289 (348)
...+.. ...+.....+-+.. |..-+..++..++ +. + ++||+|||.|.+..... +.+-. .+--+.
T Consensus 291 ~~~~~~---~~~~~~~~t~~gw~i~P~gl~~~l~~~~---~~--y-~~Pi~ITENG~~~~~~~~~~~~i~D~~Ri~yl~~ 361 (426)
T d1ug6a_ 291 GTLPVR---YLPPEGPATAMGWEVYPEGLYHLLKRLG---RE--V-PWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEA 361 (426)
T ss_dssp SSSCEE---ECCCSSCBCTTCCBCCHHHHHHHHHHHH---HH--C-SSCEEEEEECCCCCCCCSSCSSBCCHHHHHHHHH
T ss_pred cccccc---cccCCCCccCCCCeECccHhHHHHHHHH---Hh--c-CCcEEEeecCCccCCCCCCccccCCHHHHHHHHH
Confidence 111100 01111112222221 2222222333222 22 3 36999999999986541 11111 223344
Q ss_pred HHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC
Q 018955 290 YNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT 338 (348)
Q Consensus 290 y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d 338 (348)
|.+.+.+.++.|.+.+ .+|+-++.| ++--..+.++.|||+.-|
T Consensus 362 ~l~~~~~Ai~dGv~V~-----GY~~WSl~D-n~EW~~Gy~~rfGL~~VD 404 (426)
T d1ug6a_ 362 HVEAALRAREEGVDLR-----GYFVWSLMD-NFEWAFGYTRRFGLYYVD 404 (426)
T ss_dssp HHHHHHHHHHHTCCEE-----EEEEECSBC-CCCGGGGGGSCCCSEEEE
T ss_pred HHHHHHHHHHCCCCEE-----EEEecCcch-hcChhhcccCcCceEEEc
Confidence 5555555555576543 477778887 333223588999999776
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=96.85 E-value=0.024 Score=53.77 Aligned_cols=281 Identities=15% Similarity=0.132 Sum_probs=136.9
Q ss_pred CHHHHHHHHhhCCCCeEEEec------------CC-------hHHHHHHhcCCCEEEEecCCCchhhhhh------cHHH
Q 018955 48 SKRDVIALYNQNNIRRMRLYD------------PN-------REALEALRGSNIEVMLGLPNNDLRRIAS------NQAE 102 (348)
Q Consensus 48 s~~~v~~ll~~~~~~~VRlY~------------~d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~------~~~~ 102 (348)
--+++++|+++.|++.-|+== .+ .++|.+|.+.||+-++.+..-+++..-. +++.
T Consensus 59 ~y~eDi~l~~~lG~~~yRfSi~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~d~P~~l~~~gGw~~~~~ 138 (449)
T d1qoxa_ 59 RVEEDVQLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQGGWGSRIT 138 (449)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSTHH
T ss_pred hhHHHHHHHHHcCCCEEEccCCHHHcccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecccccchhccccCcCCHHH
Confidence 348899999999999998641 12 3799999999999999999866553221 1111
Q ss_pred HH---HHHHhhccccCCCceEEEEEecccccC--------C----C-cc-------hHHHHHHHHHHHHHHHHcCCCCce
Q 018955 103 AN---TWVQNNVRNFANNVKFKYIAVGNEAKP--------G----D-NF-------AQYLVPAMRNIQNAINAAGLGNQI 159 (348)
Q Consensus 103 a~---~wv~~~v~~~~~~~~I~~I~VGNE~l~--------~----~-~~-------~~~Ll~~i~~v~~~L~~~gl~~~I 159 (348)
+. +-.+.-...| +++|+.-+-=||+.. . + .. ...++.+-....+++++.+.. .
T Consensus 139 ~~~F~~Ya~~v~~~f--gd~V~~W~T~NEP~~~~~~gy~~g~~~Pg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~--~ 214 (449)
T d1qoxa_ 139 IDAFAEYAELMFKEL--GGKIKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGIS--G 214 (449)
T ss_dssp HHHHHHHHHHHHHHH--TTTCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC--S
T ss_pred HHHHHHHHHHHHHHh--cccccceEEecCcceeccccccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCC--c
Confidence 11 1111112233 357777777788632 1 0 01 123334444444556666554 4
Q ss_pred EEeeeeeccccccccCCCCc-------------------ccccCccchhhH--------------HHHHHhhcCCccccc
Q 018955 160 KVSTAIETGALGESFPPSRG-------------------SFKQDYRPILDP--------------LIRFLNENRSPLLLN 206 (348)
Q Consensus 160 ~VsT~~~~~~~~~s~pPs~~-------------------~f~~d~~~~~~~--------------~l~fL~~~~d~~~vN 206 (348)
+|+.+.+...... ..++.. .|..+..+.+.+ -.+.+....||+++|
T Consensus 215 ~vgi~~~~~~~~p-~~~~~~d~~Aa~~~~~~~~~~~~dp~~~G~yp~~~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiN 293 (449)
T d1qoxa_ 215 EIGIAPNTSWAVP-YRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELIHQPIDFIGIN 293 (449)
T ss_dssp EEEEECCCCEEEE-SSSCHHHHHHHHHHHHTTTHHHHHHHHTSSCCHHHHHHHHHHTCCCCCCTTHHHHHCCCCSEEEEE
T ss_pred eeeeecccccccc-CChHHHHHHHHHHHHHhhcccccCceecCCCcHHHHHHHHhccccccCCHHHHHHhcCCcccceec
Confidence 6776655432210 000000 000000011111 122245567999999
Q ss_pred ccccccccCC-CCCCccccccc-cCCceeccCCcc-hhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCCC---CC
Q 018955 207 LYPYFAIAGN-RQISLDYALFR-SQQTVVSDGSLS-YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGGD---GA 280 (348)
Q Consensus 207 ~yPff~~~~~-~~i~~~~a~f~-~~~~~~~d~~~~-y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~~---~~ 280 (348)
-|+=.--... ....-...... .++....|-+.. |-.=+..++.-+ -+. +++.+|+|+|.|++..... +.
T Consensus 294 yYt~~~v~~~~~~~~~~~~~~~~~~~~~~td~gwei~P~Gl~~~L~~i---~~~--y~~p~i~ITENG~a~~d~~~~~~~ 368 (449)
T d1qoxa_ 294 YYTSSMNRYNPGEAGGMLSSEAISMGAPKTDIGWEIYAEGLYDLLRYT---ADK--YGNPTLYITENGACYNDGLSLDGR 368 (449)
T ss_dssp CSCEEEEEECSSGGGTTTTEEECCCCCCBCTTSCBCCTHHHHHHHHHH---HHH--TTSCCEEEEECCCCCCCCCCTTSS
T ss_pred ccccceeecCCccccCcccccccCCCCccCCCCCeeecchhHHHHHHH---HHH--hCCCeEEEeccCcccCCCCCcccc
Confidence 9872211111 00000000000 011112222221 111122222222 133 4556899999999987642 11
Q ss_pred CCC---HHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC-----CCeeee
Q 018955 281 LTN---VDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT-----RQPRYQ 344 (348)
Q Consensus 281 vas---~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d-----~~~ky~ 344 (348)
+-. .+--+.+.+.+.+.++.|.+.+ .||+-++.| ++--..+.++.|||+.-| |+||-+
T Consensus 369 i~D~~Ri~yl~~hL~~~~~Ai~dGv~V~-----GY~~WSl~D-n~EW~~Gy~~RFGL~~VD~~t~~R~pK~S 434 (449)
T d1qoxa_ 369 IHDQRRIDYLAMHLIQASRAIEDGINLK-----GYMEWSLMD-NFEWAEGYGMRFGLVHVDYDTLVRTPKDS 434 (449)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTTCCEE-----EEEEECSBC-CCCGGGTTSSCCCSEEEETTTTEEEECHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHCCCCEE-----EEeecCcch-hcChhhcccCccceEEECCCCCCcccccH
Confidence 111 1223444555555554565443 477777777 333223588999999655 556543
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=96.36 E-value=0.1 Score=49.39 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=37.2
Q ss_pred HHHHHHHhhCCCCeEEEe---------cC---C-------hHHHHHHhcCCCEEEEecCCCchhh
Q 018955 50 RDVIALYNQNNIRRMRLY---------DP---N-------REALEALRGSNIEVMLGLPNNDLRR 95 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY---------~~---d-------~~vl~A~~~~glkV~lGv~~~~~~~ 95 (348)
+|+++|++..|++.-|+= +. + .++|.+|.+.||+-++.++.-+++.
T Consensus 57 ~eDi~l~~~lG~~~yRfSisWsRI~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~dlP~ 121 (468)
T d1pbga_ 57 PVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPE 121 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBH
T ss_pred HHHHHHHHHhCCCEEEccCCHHHcCcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecccchh
Confidence 678999999999998863 11 2 3799999999999999999866553
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=96.32 E-value=0.0056 Score=54.79 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=61.7
Q ss_pred eeeEEecCCCCCCCCHH---HHHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCch------------hhh
Q 018955 34 QIGVCYGMLGNNLPSKR---DVIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNNDL------------RRI 96 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~~---~v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~~------------~~~ 96 (348)
..|.||-|..-...+++ +.++++|..|++.||++.. ++..+.+|.+.||-|+...+.-.. ...
T Consensus 23 ~rG~~~~p~~~~~~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~f~d~~D~~Gi~V~~e~~~~~~w~~~~~~~~~~~~~~ 102 (339)
T d2vzsa5 23 IRGGGYTPDLFLRWNETAAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLTMPGWECCDKWEGQVNGEEKGEPWV 102 (339)
T ss_dssp EEEEECCCCTTCCCCHHHHHHHHHHHHHTTCCEEEEESCCCCHHHHHHHHHHTCEEEEECCSSSGGGTTTSTTSSSCCCC
T ss_pred EeccccCCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCeEecccccCccccccCCcccccCCCC
Confidence 45899977543234444 3578999999999999965 368999999999999988652110 000
Q ss_pred hhcHHHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 97 ASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 97 a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
....+.+.+-+.+.|.++...-.|..-.+|||.-.
T Consensus 103 p~~~~~~~~~~~~~v~r~rnHPsvi~W~~gNE~~~ 137 (339)
T d2vzsa5 103 ESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAP 137 (339)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEecCcCCCc
Confidence 01122233334444544422223668899999764
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=96.22 E-value=0.13 Score=48.25 Aligned_cols=273 Identities=15% Similarity=0.164 Sum_probs=132.5
Q ss_pred HHHHHHHHhhCCCCeEEEec------------CC-------hHHHHHHhcCCCEEEEecCCCchhhhhh------cHHHH
Q 018955 49 KRDVIALYNQNNIRRMRLYD------------PN-------REALEALRGSNIEVMLGLPNNDLRRIAS------NQAEA 103 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~------------~d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~------~~~~a 103 (348)
.+++++|+++.|++..|+== .+ .++|.+|...||+-++++..-+++..-. +++.+
T Consensus 59 y~eDi~l~~~lG~~~yRfsi~WsRi~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf~~P~wl~~~gGw~~~~~v 138 (443)
T d2j78a1 59 WKEDIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLKGGWANREIA 138 (443)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTGGGSTTHH
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHceeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCccchhhhhhcCCccChHHH
Confidence 36789999999999999741 12 3799999999999999999765443111 11111
Q ss_pred ---HHHHHhhccccCCCceEEEEEecccccCC-------C-------c------chHHHHHHHHHHHHHHHHcCCCCceE
Q 018955 104 ---NTWVQNNVRNFANNVKFKYIAVGNEAKPG-------D-------N------FAQYLVPAMRNIQNAINAAGLGNQIK 160 (348)
Q Consensus 104 ---~~wv~~~v~~~~~~~~I~~I~VGNE~l~~-------~-------~------~~~~Ll~~i~~v~~~L~~~gl~~~I~ 160 (348)
.+-.+.-...| ++.|+.-+-=||+..- + + ....++.+-..+.+++++..- +.+
T Consensus 139 ~~F~~Ya~~v~~~~--gd~V~~w~TiNEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~n~l~AHa~A~~~~~~~~~--~~~ 214 (443)
T d2j78a1 139 DWFAEYSRVLFENF--GDRVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVK--DGK 214 (443)
T ss_dssp HHHHHHHHHHHHHH--TTTCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCT--TCE
T ss_pred HHHHHHHHHHHHHh--CccccceEeccCceeEeecccccCcccccccchHHHHHHHHHHHHHHHHHHHHhhhccc--CCc
Confidence 11111112233 3567666666775320 1 1 122334444444455555443 246
Q ss_pred EeeeeeccccccccCCCCc---------------cc-----ccCccchhh------------HHHHHHhhcCCccccccc
Q 018955 161 VSTAIETGALGESFPPSRG---------------SF-----KQDYRPILD------------PLIRFLNENRSPLLLNLY 208 (348)
Q Consensus 161 VsT~~~~~~~~~s~pPs~~---------------~f-----~~d~~~~~~------------~~l~fL~~~~d~~~vN~y 208 (348)
|+.+.+.....- ..++.. -| ..+....+. ....-+..+.||+++|-|
T Consensus 215 vGi~~~~~~~~p-~~~~~~d~~aa~~~~~~~~~~~f~d~~~~g~yp~~~~~~~~~~~~~~~~~~~~~~~~~~DFiGiNyY 293 (443)
T d2j78a1 215 IGIVFNNGYFEP-ASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGLNYY 293 (443)
T ss_dssp EEEEEEEEEEEE-SSSCHHHHHHHHHHHHHHSTHHHHHHHHHSSCCHHHHHHHGGGSCTTGGGGHHHHTCCCSEEEEEEE
T ss_pred eeeeeccccccc-CCccchhHHHHHHHHHHhhhhhccchhhcCCChHHHHHhhhhcCcccchHHHHHhhCCcccceeecc
Confidence 776665433211 001100 00 000000000 011224467899999988
Q ss_pred ccccccCCCCCCccccccccCCceeccCCcc-hhhHHHHHHHHHHHHHHHhCCCCccEEEeeeccCCCCC---CCCCCC-
Q 018955 209 PYFAIAGNRQISLDYALFRSQQTVVSDGSLS-YRSLFDAILDAVYAALEKTGGGSLGIVISESGWPTAGG---DGALTN- 283 (348)
Q Consensus 209 Pff~~~~~~~i~~~~a~f~~~~~~~~d~~~~-y~n~~da~~da~~~a~~~~g~~~~~v~I~ETGWPS~G~---~~~vas- 283 (348)
.-.--..+...+.... +..+.....+-+.. |-.=+...+.-++ +. +++.+|+|+|.|++.... .+.+-.
T Consensus 294 ~~~~v~~~~~~~~~~~-~~~~~~~~t~~gw~i~P~gl~~~l~~~~---~~--y~~p~I~ItENG~a~~d~~~~~g~v~D~ 367 (443)
T d2j78a1 294 SGHLVKFDPDAPAKVS-FVERDLPKTAMGWEIVPEGIYWILKKVK---EE--YNPPEVYITENGAAFDDVVSEDGRVHDQ 367 (443)
T ss_dssp EEEEEEECTTC-CCEE-EECCSSCBCTTCCBCCTHHHHHHHHHHH---HH--HCCSCEEEEEECCCCCCCBCTTSCBCCH
T ss_pred cceEEecCCCCCcccc-cccccCCcCCCCcEEecchHHHHHHHHH---Hh--cCCCcEEEEecccccCCCCCccCccCCH
Confidence 6332221111111111 11111112222221 2222222222222 33 244469999999997653 121111
Q ss_pred --HHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC
Q 018955 284 --VDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT 338 (348)
Q Consensus 284 --~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d 338 (348)
.+--+.+.+.+.+.++.|.+.+ .||+-++.| ++--..+.++.|||+.-|
T Consensus 368 ~Ri~yl~~hL~~v~~Ai~dGv~V~-----GY~~WSllD-n~EW~~Gy~~rfGL~~VD 418 (443)
T d2j78a1 368 NRIDYLKAHIGQAWKAIQEGVPLK-----GYFVWSLLD-NFEWAEGYSKRFGIVYVD 418 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEE-----EEEEECSBC-CCCGGGGGGCCCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEE-----EEEecCcch-hcChhhcccCCCceEEEc
Confidence 2334555555555555565432 477777887 333223588999999654
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=96.21 E-value=0.11 Score=49.07 Aligned_cols=47 Identities=21% Similarity=0.188 Sum_probs=37.6
Q ss_pred HHHHHHHHhhCCCCeEEEec---------C---C-------hHHHHHHhcCCCEEEEecCCCchhh
Q 018955 49 KRDVIALYNQNNIRRMRLYD---------P---N-------REALEALRGSNIEVMLGLPNNDLRR 95 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY~---------~---d-------~~vl~A~~~~glkV~lGv~~~~~~~ 95 (348)
-+++++|++..|++.-|+== . | .++|.+|.+.||+.++.+..-+++.
T Consensus 59 y~eDi~l~~~lG~~~yRfSi~WsRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~HfdlP~ 124 (464)
T d1gnxa_ 59 WREDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQ 124 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBH
T ss_pred hHHHHHHHHHcCCCEEEccCCHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecCccHH
Confidence 36789999999999998631 1 2 3799999999999999999866554
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=96.06 E-value=0.14 Score=48.78 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=50.9
Q ss_pred HHHHHHHhhCCCCeEEEe---------c----C-C-------hHHHHHHhcCCCEEEEecCCCchhh-hh------hcHH
Q 018955 50 RDVIALYNQNNIRRMRLY---------D----P-N-------REALEALRGSNIEVMLGLPNNDLRR-IA------SNQA 101 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY---------~----~-d-------~~vl~A~~~~glkV~lGv~~~~~~~-~a------~~~~ 101 (348)
+|+++|++..|++.-|+= + . | .++|.+|.+.||+.++.+..-+++. +. .+++
T Consensus 70 ~eDi~l~~~lG~~~yRfSisWsRI~P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hfd~P~~l~~~~Ggw~n~~ 149 (484)
T d1v02a_ 70 AEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDAYGGFLDER 149 (484)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHHHCGGGSTH
T ss_pred HHHHHHHHHhCCCEEEccCCHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCCcccceeeeecCcccCHH
Confidence 678999999999998863 1 1 2 3699999999999999999876653 32 1122
Q ss_pred HHHHH---HHhhccccCCCceEEEEEecccc
Q 018955 102 EANTW---VQNNVRNFANNVKFKYIAVGNEA 129 (348)
Q Consensus 102 ~a~~w---v~~~v~~~~~~~~I~~I~VGNE~ 129 (348)
.+... ...-...| +++|+.-+-=||+
T Consensus 150 ~~~~F~~Ya~~v~~~f--gd~V~~W~T~NEP 178 (484)
T d1v02a_ 150 IIKDYTDFAKVCFEKF--GKTVKNWLTFNEP 178 (484)
T ss_dssp HHHHHHHHHHHHHHHH--TTTCCEEEEEECH
T ss_pred HHHHHHHhhHHHHHHh--cchhhceEEecCc
Confidence 12111 11112233 4677777777886
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.62 E-value=0.012 Score=52.30 Aligned_cols=94 Identities=14% Similarity=0.084 Sum_probs=60.5
Q ss_pred eeeEEecCCCCCC--CCHHH---HHHHHhhCCCCeEEEecC----ChHHHHHHhcCCCEEEEecCCCc-----hhhhhhc
Q 018955 34 QIGVCYGMLGNNL--PSKRD---VIALYNQNNIRRMRLYDP----NREALEALRGSNIEVMLGLPNND-----LRRIASN 99 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~--~s~~~---v~~ll~~~~~~~VRlY~~----d~~vl~A~~~~glkV~lGv~~~~-----~~~~a~~ 99 (348)
..|+||.+..... .++++ .++++|..|++.||+|.. ++..+.+|...||.|+..++... .+..
T Consensus 27 lrG~~~~~~~~~~~~~~~e~~~~di~l~ke~G~N~IR~~~~~~~p~~~f~d~cD~~GilV~~e~~~~~~~~~~~~~~--- 103 (348)
T d2je8a5 27 AKGANYIPQDALLPNVTTERYQTLFRDMKEANMNMVRIWGGGTYENNLFYDLADENGILVWQDFMFACTPYPSDPTF--- 103 (348)
T ss_dssp EEEEEECCSCSSGGGCCHHHHHHHHHHHHHTTCCEEEECTTSCCCCHHHHHHHHHHTCEEEEECSCBSSCCCCCHHH---
T ss_pred EeeEecCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEecCCCCCCCCHHHHHHHHHCCCEEEeccchhccCCCCCHHH---
Confidence 4599998764332 35554 467889999999999864 46789999999999999987421 1111
Q ss_pred HHHHHHHHHhhccccCCCceEEEEEeccccc
Q 018955 100 QAEANTWVQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 100 ~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
.+.+.+-+.+-|..+...-.|..-.+|||..
T Consensus 104 ~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~ 134 (348)
T d2je8a5 104 LKRVEAEAVYNIRRLRNHASLAMWCGNNEIL 134 (348)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEESCBSHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeccCccc
Confidence 1122222334444432222466778999964
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=95.52 E-value=0.15 Score=47.00 Aligned_cols=113 Identities=15% Similarity=0.031 Sum_probs=67.6
Q ss_pred HHHHHhhCCCCeEEEe---c----CC------------hHHHHHHhcCCCEEEEecCC------C-ch--------hhhh
Q 018955 52 VIALYNQNNIRRMRLY---D----PN------------REALEALRGSNIEVMLGLPN------N-DL--------RRIA 97 (348)
Q Consensus 52 v~~ll~~~~~~~VRlY---~----~d------------~~vl~A~~~~glkV~lGv~~------~-~~--------~~~a 97 (348)
+++.|++.|++.|||- . .+ ..+++.+++.||+|+|.+-. . +. ..-.
T Consensus 73 D~~~i~~~G~N~VRiPv~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~~~~~~~~ 152 (394)
T d2pb1a1 73 DFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNG 152 (394)
T ss_dssp HHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTST
T ss_pred HHHHHHHCCCCEEEEEecHHHhcCCCCCccchhHHHHHHHHHHHHHHCCcEEEEEeeccCCcccCcCCcCccCccccccH
Confidence 4667889999999993 1 11 24677788999999997631 0 00 0001
Q ss_pred hcHHHHHHHHHhhccccC--C-CceEEEEEecccccCCCcchHHHHHHHHHHHHHHHHcCCCCceEEeeeee
Q 018955 98 SNQAEANTWVQNNVRNFA--N-NVKFKYIAVGNEAKPGDNFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 98 ~~~~~a~~wv~~~v~~~~--~-~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~ 166 (348)
.+.+...+.++.-...|. | ...|.++=+=||+.........+..+.+++.+++++.+- +++|...+.
T Consensus 153 ~~~~~~~~~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~--~~~I~i~~~ 222 (394)
T d2pb1a1 153 DNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGS--VTPVIIHDA 222 (394)
T ss_dssp THHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTC--CCCEEEECT
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCceEEEeecccCCcccccHHHHHHHHHHHHHHHHHhCC--CCeEEEcCC
Confidence 122222222222222221 1 235888899999865433466788888888888888764 355555443
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=95.15 E-value=0.043 Score=50.14 Aligned_cols=129 Identities=11% Similarity=0.032 Sum_probs=78.1
Q ss_pred eeeEEecCCCCCCCCH---HHHHHHHhhCCCCeEEEecC-------------C-----hHHHHHHhcCCCEEEEecCCCc
Q 018955 34 QIGVCYGMLGNNLPSK---RDVIALYNQNNIRRMRLYDP-------------N-----REALEALRGSNIEVMLGLPNND 92 (348)
Q Consensus 34 ~~Gi~Y~~~~~~~~s~---~~v~~ll~~~~~~~VRlY~~-------------d-----~~vl~A~~~~glkV~lGv~~~~ 92 (348)
.+|.+.-.++ .|++ .+.++++|..|++.||+|-. + ..+|++|++.||+|++.....-
T Consensus 22 ~~~~~~h~~r--~~~~~~w~~~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~ 99 (354)
T d1tg7a5 22 IFSGEVHPYR--LPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYI 99 (354)
T ss_dssp EEEEECCGGG--SCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCC
T ss_pred EEEEecCCCC--CCCHHHHHHHHHHHHHcCCCEEEEecchhccCCCCCcccccchhhHHHHHHHHHHcCCEEEEcCCCCc
Confidence 3455554443 3444 46788999999999999721 1 4679999999999999764210
Q ss_pred --------hhhh------------hhcHHHHHHHHHhhccc-----cCCCceEEEEEecccccCCC-c-chHHHHHHHHH
Q 018955 93 --------LRRI------------ASNQAEANTWVQNNVRN-----FANNVKFKYIAVGNEAKPGD-N-FAQYLVPAMRN 145 (348)
Q Consensus 93 --------~~~~------------a~~~~~a~~wv~~~v~~-----~~~~~~I~~I~VGNE~l~~~-~-~~~~Ll~~i~~ 145 (348)
.+.. ..-.+...+|++.-+.. +.....|..+.+|||.-... . .......+++.
T Consensus 100 ~~~w~~~~~p~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~ 179 (354)
T d1tg7a5 100 NAEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQY 179 (354)
T ss_dssp CTTBGGGGCCGGGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHH
T ss_pred CcccccCCCCcccccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHH
Confidence 0000 01134555665544322 11124588999999975321 1 12223467788
Q ss_pred HHHHHHHcCCCCceEEeeeee
Q 018955 146 IQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 146 v~~~L~~~gl~~~I~VsT~~~ 166 (348)
+++..+..+.. ++..|.+.
T Consensus 180 l~~~~~~~~~~--~p~~~~~~ 198 (354)
T d1tg7a5 180 IEDHARDAGIV--VPFISNDA 198 (354)
T ss_dssp HHHHHHHTTCC--SCBBCCBS
T ss_pred HHhhhhccCcc--cceEeccc
Confidence 88888887764 56666553
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=95.10 E-value=0.022 Score=49.87 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=63.7
Q ss_pred eeEEecCCCCCCCCHHHHHHHHhhCCCCeEEEec-C-----------C----hHHHHHHhcCCCEEEEecCCCchhhhhh
Q 018955 35 IGVCYGMLGNNLPSKRDVIALYNQNNIRRMRLYD-P-----------N----REALEALRGSNIEVMLGLPNNDLRRIAS 98 (348)
Q Consensus 35 ~Gi~Y~~~~~~~~s~~~v~~ll~~~~~~~VRlY~-~-----------d----~~vl~A~~~~glkV~lGv~~~~~~~~a~ 98 (348)
+|+||-|-+.+..--++.++++|+.|++.||+.. . | ..+|..+++.||+++|.+.....+....
T Consensus 2 ~~~~~~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~~~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~~ 81 (393)
T d1kwga2 2 LGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVLGTPTATPPKWLV 81 (393)
T ss_dssp EEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHH
T ss_pred cCcccCcccCCHHHHHHHHHHHHHcCCCEEEecccchhhcCCCCCccCHHHHHHHHHHHHHCCCEEEEEcCCCCCchhhh
Confidence 7999987663211235678899999999999874 3 1 3688999999999999997654332111
Q ss_pred ------------------------------cHHHHHHHHHhhccccCCCceEEEEEecccccCC
Q 018955 99 ------------------------------NQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPG 132 (348)
Q Consensus 99 ------------------------------~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~ 132 (348)
..+...+.+..-...+.....+.....+||.-..
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 82 DRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp HHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred ccCcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 1122233333333333334568889999998663
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=95.00 E-value=0.49 Score=44.92 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=51.9
Q ss_pred HHHHHHHhhCCCCeEEEe------------c--CC-------hHHHHHHhcCCCEEEEecCCCchhhhhh-------cHH
Q 018955 50 RDVIALYNQNNIRRMRLY------------D--PN-------REALEALRGSNIEVMLGLPNNDLRRIAS-------NQA 101 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRlY------------~--~d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~-------~~~ 101 (348)
+++++|++..|++.-|+= + .+ .++|.+|.+.||+.++.++.-+++..-. +++
T Consensus 78 ~eDi~l~~~lG~~~yRfSI~WsRI~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~HfdlP~~l~~~~GGW~~~~ 157 (499)
T d1e4mm_ 78 QKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQ 157 (499)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHHHCGGGSTH
T ss_pred HHHHHHHHHhCCCEEEccCCHHHcCcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecCchHHHHHHhcccccCHH
Confidence 678999999999999874 1 23 3689999999999999999877664221 112
Q ss_pred HHHHH---HHhhccccCCCceEEEEEeccccc
Q 018955 102 EANTW---VQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 102 ~a~~w---v~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
.+... .+.-+..| +++|+.-+-=||+.
T Consensus 158 ~~~~F~~YA~~v~~~f--gd~Vk~W~T~NEP~ 187 (499)
T d1e4mm_ 158 IIDDFKDYADLCFEEF--GDSVKYWLTINQLY 187 (499)
T ss_dssp HHHHHHHHHHHHHHHH--TTTCCEEEEESCTT
T ss_pred HHHHHHHHHHHHHHhh--ccccceeEEccCce
Confidence 22111 11112233 46787877778864
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=94.96 E-value=0.15 Score=44.70 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=44.5
Q ss_pred eeeEEecCCCCC---CCCHHH---HHHHHhhCCCCeEEEec--CChHHHHHHhcCCCEEEEecCC
Q 018955 34 QIGVCYGMLGNN---LPSKRD---VIALYNQNNIRRMRLYD--PNREALEALRGSNIEVMLGLPN 90 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~~---v~~ll~~~~~~~VRlY~--~d~~vl~A~~~~glkV~lGv~~ 90 (348)
..|+|+-..... .++.+. .++++|..|++.||++. .++..+.+|...||.|+..++.
T Consensus 17 l~Gv~~h~~~p~~G~a~~~~~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gilv~~e~~~ 81 (297)
T d1yq2a5 17 FHGVNRHETHPDRGRVFDEAGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFWVILECDL 81 (297)
T ss_dssp EEEEEECCCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCEEEEECSC
T ss_pred EeeeEcCCcCcccCcCCCHHHHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCEEEEeecc
Confidence 569998755422 355544 46789999999999985 3578999999999999998875
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.1 Score=45.46 Aligned_cols=95 Identities=17% Similarity=0.024 Sum_probs=62.5
Q ss_pred eeeEEecCCCCC---CCCHHH---HHHHHhhCCCCeEEEecC--ChHHHHHHhcCCCEEEEecCCCc-----------hh
Q 018955 34 QIGVCYGMLGNN---LPSKRD---VIALYNQNNIRRMRLYDP--NREALEALRGSNIEVMLGLPNND-----------LR 94 (348)
Q Consensus 34 ~~Gi~Y~~~~~~---~~s~~~---v~~ll~~~~~~~VRlY~~--d~~vl~A~~~~glkV~lGv~~~~-----------~~ 94 (348)
..|+||-+.... .++++. .++++|..|++.||++.- ++..+.+|...||-|+..++... .+
T Consensus 18 l~G~~~~~~~~~~g~~~~~~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gilv~~e~~~~~~~~~~~~~~~~~~ 97 (292)
T d1jz8a5 18 IRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDP 97 (292)
T ss_dssp EEEEECCCCBTTTBTCCCHHHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCEEEEECSCBCTTSSSTTTTTTCG
T ss_pred EeeeEccCCCCccCCCCCHHHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCeEEeeeeecccCCcccCCCCCCH
Confidence 569999876432 356655 466889999999999965 46899999999999999986421 12
Q ss_pred hhhhcHHHHHHHHHhhccccCCCceEEEEEecccccC
Q 018955 95 RIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP 131 (348)
Q Consensus 95 ~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~ 131 (348)
.+. +...+-+++.|..+..--.|-.=.+|||.-.
T Consensus 98 ~~~---~~~~~~~~~~v~r~~nHPSvi~W~~~NE~~~ 131 (292)
T d1jz8a5 98 RWL---PAMSERVTRMVQRDRNHPSVIIWSLGNESGH 131 (292)
T ss_dssp GGH---HHHHHHHHHHHHHHTTCTTEEEEECCSSCCC
T ss_pred HHH---HHHHHHHHHHHHHccCCCcHHHhcccccCCc
Confidence 211 1222223333443322234777889999854
|
| >d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: PP1699/LP2961-like domain: Putative amidohydrolase LP2961 species: Lactobacillus plantarum [TaxId: 1590]
Probab=91.31 E-value=1.7 Score=37.74 Aligned_cols=110 Identities=17% Similarity=0.249 Sum_probs=61.1
Q ss_pred HHHHHHhcCCCEEEE-e-----cCCCchhhhhhcHHHHHHHHHhhccccCCCceEEEEEecccccCCCcchHHHHHHHHH
Q 018955 72 EALEALRGSNIEVML-G-----LPNNDLRRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFAQYLVPAMRN 145 (348)
Q Consensus 72 ~vl~A~~~~glkV~l-G-----v~~~~~~~~a~~~~~a~~wv~~~v~~~~~~~~I~~I~VGNE~l~~~~~~~~Ll~~i~~ 145 (348)
..|+.....||...+ . +...+......-....++|+.+.+..| | +++.++.. =.+ ...-.++++
T Consensus 38 ~~l~~Md~~GI~~avl~~~~p~~~~~~~~~~~~~~~~~Nd~~~~~~~~~-P-~Rf~~~a~--vp~------~~~~~a~~e 107 (306)
T d2f6ka1 38 LTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKSLAQQY-P-DQLGYLAS--LPI------PYELDAVKT 107 (306)
T ss_dssp HHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHHHHHHC-T-TTEEEEEC--CCT------TCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcccccCCHHHHHHHHHHHHHHHHHHHHHC-C-CeEEEEee--ccc------chhhHHHHH
Confidence 345666677775432 1 221121111111234467887777776 5 45544321 122 224556777
Q ss_pred HHHHHHHcCCCCceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCccccc
Q 018955 146 IQNAINAAGLGNQIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLN 206 (348)
Q Consensus 146 v~~~L~~~gl~~~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN 206 (348)
++.+++..|+-+ |++.+.... .+-+ .+.+.|+.+.+++.+=++.+|
T Consensus 108 l~r~~~~~G~~G-i~~~~~~~~------------~~~~--dp~~~pi~~~~~e~~lpv~~H 153 (306)
T d2f6ka1 108 VQQALDQDGALG-VTVPTNSRG------------LYFG--SPVLERVYQELDARQAIVALH 153 (306)
T ss_dssp HHHHHHTSCCSE-EEEESEETT------------EETT--CGGGHHHHHHHHTTTCEEEEE
T ss_pred HHHHHhcccceE-EEecCcccc------------ccCC--CccchHHHHHHHHcCCceEec
Confidence 888888888875 777643211 1111 356889999898888777665
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.94 E-value=3.5 Score=37.60 Aligned_cols=113 Identities=13% Similarity=0.053 Sum_probs=62.4
Q ss_pred HHHHHhhCCCCeEEEe------cC---C-----------hHHHHHHhcCCCEEEEecCC----------Cch---hhh--
Q 018955 52 VIALYNQNNIRRMRLY------DP---N-----------REALEALRGSNIEVMLGLPN----------NDL---RRI-- 96 (348)
Q Consensus 52 v~~ll~~~~~~~VRlY------~~---d-----------~~vl~A~~~~glkV~lGv~~----------~~~---~~~-- 96 (348)
+++.|++.|+++|||- .. + ..+++-+++.||+|+|.+-. +.. ...
T Consensus 78 D~~~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~ 157 (408)
T d1h4pa_ 78 DFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLE 157 (408)
T ss_dssp HHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTS
T ss_pred HHHHHHHCCCCEEEEeccHHHhcCCCCCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCCCCcCCCCCCcccccccCC
Confidence 4567788999999994 11 1 25667788999999996641 000 000
Q ss_pred hhcHHHHHHHHHhhccccCCC----ceEEEEEecccccCCC-cchHHHHHHHHHHHHHHHHcCCCCceEEeeeee
Q 018955 97 ASNQAEANTWVQNNVRNFANN----VKFKYIAVGNEAKPGD-NFAQYLVPAMRNIQNAINAAGLGNQIKVSTAIE 166 (348)
Q Consensus 97 a~~~~~a~~wv~~~v~~~~~~----~~I~~I~VGNE~l~~~-~~~~~Ll~~i~~v~~~L~~~gl~~~I~VsT~~~ 166 (348)
..+.+...+ +-+.|...+.. ..|.++=+=||+.... +....+..+++.+.+++++. ....++|...+.
T Consensus 158 ~~~~~~~~~-~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~-~~~~~~iv~~d~ 230 (408)
T d1h4pa_ 158 DSNLAVTIN-VLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNN-IKSDQVIIIHDA 230 (408)
T ss_dssp HHHHHHHHH-HHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHT-TCCCCCEEEECT
T ss_pred chHHHHHHH-HHHHHHHHhcccccccceeeeecccCccccccchHHHHHHHHHHHHHHHHhc-cccCceEEEecC
Confidence 012222222 22344443332 3577788888887532 23344555666666666653 223456665543
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=89.81 E-value=2.9 Score=37.51 Aligned_cols=55 Identities=16% Similarity=0.092 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeec--CCCCCCC---CCCCceeeecCCCCeeee
Q 018955 285 DNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFD--ENGKTGP---EIERHWGLFAPTRQPRYQ 344 (348)
Q Consensus 285 ~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fD--e~wK~~~---~~E~~wGl~~~d~~~ky~ 344 (348)
+.|+.++++++..+.+ .|. .+.-+.+.=|. ..|.++. +.+.+=+||+.|.+||-.
T Consensus 277 ~~qA~~y~~~~~~~~~----~~~-~v~~it~Wg~~D~~sW~~~~~~~~~~~~plL~d~d~~pKpA 336 (350)
T d1ur1a_ 277 DKLAKRYEDLFKLFIK----HSD-KIDRATFWGVSDDASWLNGFPIPGRTNYPLLFDRKLQPKDA 336 (350)
T ss_dssp HHHHHHHHHHHHHHHH----TTT-TEEEEEESCSBGGGCGGGTSSSTTCCCCCSSBCTTSCBCHH
T ss_pred HHHHHHHHHHHHHHHh----cCC-CeeEEEEECCccCcccccCCCCCCCCCCCCCCCCCCCCCHH
Confidence 4567788888777642 221 45555555343 3476541 234445699999999953
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=85.73 E-value=9.9 Score=32.61 Aligned_cols=219 Identities=14% Similarity=0.194 Sum_probs=115.7
Q ss_pred CCCCCCCCHHHHHHHHhh--CCCCeEEEe---cCCh----HHHHHHhcCCCEEEEecCC--CchhhhhhcH--HHHHHHH
Q 018955 41 MLGNNLPSKRDVIALYNQ--NNIRRMRLY---DPNR----EALEALRGSNIEVMLGLPN--NDLRRIASNQ--AEANTWV 107 (348)
Q Consensus 41 ~~~~~~~s~~~v~~ll~~--~~~~~VRlY---~~d~----~vl~A~~~~glkV~lGv~~--~~~~~~a~~~--~~a~~wv 107 (348)
.+-+..|+.+++...-+. +....|=+| +.+. ..++++...|--+++++.. ..+..++... +.+.+ +
T Consensus 6 a~~g~~~~~~ai~~f~~~~Gr~~~iv~~~~~w~~~~~~~~~~~~~~~~~g~~~~it~~P~~~~~~~ia~G~yD~~i~~-~ 84 (273)
T d2v3ga1 6 AWVGTQPSESAIKSFQELQGRKLDIVHQFINWSTDFSWVRPYADAVYNNGSILMITWEPWEYNTVDIKNGKADAYITR-M 84 (273)
T ss_dssp EECSSCCCHHHHHHHHHHHTSCCSEEEEEEETTCCHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHTTTTHHHHHH-H
T ss_pred EEECCCCcHHHHHHHHHhcCCCceEEEEeccCCCCchhHHHHHHHHHhCCCeEEEEeCCCCCCHHHHhCcchHHHHHH-H
Confidence 344556777777654443 335666666 3332 4455666788777777654 2344443221 12222 2
Q ss_pred HhhccccCCCceEEEEEecccccCCC-----------cchHHHHHHHHHHHHHHHHcCCCCceEEe-eeee-----cccc
Q 018955 108 QNNVRNFANNVKFKYIAVGNEAKPGD-----------NFAQYLVPAMRNIQNAINAAGLGNQIKVS-TAIE-----TGAL 170 (348)
Q Consensus 108 ~~~v~~~~~~~~I~~I~VGNE~l~~~-----------~~~~~Ll~~i~~v~~~L~~~gl~~~I~Vs-T~~~-----~~~~ 170 (348)
.+.+..+ +.. ..|-.|.|.=-.. ..++.-..+-++|.+.+++.|.+. +... ++.. ...+
T Consensus 85 a~~l~~~--g~p-v~~R~~hE~ng~W~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~n-v~~vw~p~~~~~~~~~~~ 160 (273)
T d2v3ga1 85 AQDMKAY--GKE-IWLRPLHEANGDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATN-VKWVFNVNCDNVGNGTSY 160 (273)
T ss_dssp HHHHHHH--CSC-EEEEESCCTTSSSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTT-EEEBCCEESSCCSTTCCS
T ss_pred HHHHHhc--CCC-EEEEecccCCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCe-eEEEEcCCCCCCCChhhH
Confidence 2334443 222 2666888864210 157788999999999999988874 5432 2211 0111
Q ss_pred ccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccccccCCCCCCccccccccCCceeccCCcchhhHHHHHHHH
Q 018955 171 GESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYFAIAGNRQISLDYALFRSQQTVVSDGSLSYRSLFDAILDA 250 (348)
Q Consensus 171 ~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff~~~~~~~i~~~~a~f~~~~~~~~d~~~~y~n~~da~~da 250 (348)
...|| . .+-+|.++++.|.+...... .+ .+ .-|...++.
T Consensus 161 ~~yYP----------G----------DdyVD~vG~d~Y~~~~~~~~-----------------~~---~~-~~~~~~~~~ 199 (273)
T d2v3ga1 161 LGHYP----------G----------DNYVDYTSIDGYNWGTTQSW-----------------GS---QW-QSFDQVFSR 199 (273)
T ss_dssp STTCC----------C----------GGGCSBEEEEEEECTTCCTT-----------------TC---CC-CCHHHHHHH
T ss_pred HhhCC----------C----------CCEEEEEEEeccCCCCcccc-----------------hh---hh-hhHHHHHHH
Confidence 11232 0 13469999999986543211 00 01 123344454
Q ss_pred HHHHHHHhCCCCccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCC
Q 018955 251 VYAALEKTGGGSLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGK 323 (348)
Q Consensus 251 ~~~a~~~~g~~~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK 323 (348)
.+..++. .+|||+|+|+|=...|+. ...+++.+.+.+..- .|. +..+.-||++.+
T Consensus 200 ~~~~~~~---~~KPi~i~E~G~~~~~~~--------~~~W~~~~~~~~~~~---~p~----v~~~vwfn~~~~ 254 (273)
T d2v3ga1 200 AYQALAS---INKPIIIAEFASAEIGGN--------KARWITEAYNSIRTS---YNK----VIAAVWFHENKE 254 (273)
T ss_dssp HHHHHTT---SSSCEEEEEEEECSTTSC--------HHHHHHHHHHHHHHH---CTT----EEEEEEECCBSS
T ss_pred HHHHHHh---CCCCEEEEeecCCCCCCc--------hhHHHHHHHHHHHhh---CCc----EEEEEEecCCCC
Confidence 4444332 478999999995543321 234666666655311 221 334445676644
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=83.96 E-value=0.26 Score=46.82 Aligned_cols=74 Identities=14% Similarity=0.208 Sum_probs=47.8
Q ss_pred CccEEEeeeccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCCccEEEEEeecCCCCCCCCCCCceeeecCC---
Q 018955 262 SLGIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKRGSPKRPGRPIETYIFAMFDENGKTGPEIERHWGLFAPT--- 338 (348)
Q Consensus 262 ~~~v~I~ETGWPS~G~~~~vas~~na~~y~~~~~~~~~~gtp~~~~~~~~~f~F~~fDe~wK~~~~~E~~wGl~~~d--- 338 (348)
++||+|||.|....-+. -=.+--+.+++.+.+.++.|.+.+ .||+-++.| ++--..+.++.|||+.-|
T Consensus 379 ~~Pi~ITENG~~~~~D~---~Ri~yl~~hL~~~~~Ai~dGv~V~-----GY~~WSl~D-n~EW~~Gy~~RfGL~~VD~~t 449 (481)
T d1qvba_ 379 GVDLIVTENGVSDSRDA---LRPAYLVSHVYSVWKAANEGIPVK-----GYLHWSLTD-NYEWAQGFRQKFGLVMVDFKT 449 (481)
T ss_dssp CCEEEEEECCCCCTTCS---SHHHHHHHHHHHHHHHHHTTCCEE-----EEEEECSBC-CCCGGGTTSSCCCSEEEETTT
T ss_pred CCCEEEECCCCCcccCh---HHHHHHHHHHHHHHHHHHCCCCEE-----EEeeccchh-hhChhhcccccCceEEEcCCC
Confidence 46999999998754221 123445666666666666676543 478888888 433223488999998765
Q ss_pred --CCeeee
Q 018955 339 --RQPRYQ 344 (348)
Q Consensus 339 --~~~ky~ 344 (348)
|.||-+
T Consensus 450 ~~R~pK~S 457 (481)
T d1qvba_ 450 KKRYLRPS 457 (481)
T ss_dssp TEEEECHH
T ss_pred CCcccccH
Confidence 555543
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=83.92 E-value=11 Score=33.86 Aligned_cols=144 Identities=13% Similarity=0.031 Sum_probs=86.2
Q ss_pred HHHHHHHhhCCCCeEEE-ecC--C--------------------------------hHHHHHHhcCCCEEEEecCCCchh
Q 018955 50 RDVIALYNQNNIRRMRL-YDP--N--------------------------------REALEALRGSNIEVMLGLPNNDLR 94 (348)
Q Consensus 50 ~~v~~ll~~~~~~~VRl-Y~~--d--------------------------------~~vl~A~~~~glkV~lGv~~~~~~ 94 (348)
.+++++||..+...+|. =++ + ..-++-|+..|.+.+++|+...-
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g~~- 115 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTR- 115 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSC-
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCCCHHHHHHHHHHhCCeEEEEEeCCCc-
Confidence 58999999999999997 111 0 13667778899999999997531
Q ss_pred hhhhcHHHHHHHHHhhc------------cccCC-CceEEEEEecccccCCC----cchHHHHHHHHHHHHHHHHcCCCC
Q 018955 95 RIASNQAEANTWVQNNV------------RNFAN-NVKFKYIAVGNEAKPGD----NFAQYLVPAMRNIQNAINAAGLGN 157 (348)
Q Consensus 95 ~~a~~~~~a~~wv~~~v------------~~~~~-~~~I~~I~VGNE~l~~~----~~~~~Ll~~i~~v~~~L~~~gl~~ 157 (348)
.++++.+||.=.- ..-+| +-.|+++-||||.--.+ .++++-....+...+++++.. +
T Consensus 116 ----~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~~~~~~Y~~~~~~f~~amk~~d--P 189 (367)
T d1qw9a2 116 ----GIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIACEAAKVMKWVD--P 189 (367)
T ss_dssp ----CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHHHHHHHHHHHC--T
T ss_pred ----cHHHHHHHHHHHccCCCCHHHHHHHHcCCCCCCCceEEEeccccccccccCCCCHHHHHHHHHHHHHHHhhcC--C
Confidence 2345566664111 11112 23699999999975432 245666666666666666653 3
Q ss_pred ceEEeeeeeccccccccCCCCcccccCccchhhHHHHHHhhcCCcccccccccc
Q 018955 158 QIKVSTAIETGALGESFPPSRGSFKQDYRPILDPLIRFLNENRSPLLLNLYPYF 211 (348)
Q Consensus 158 ~I~VsT~~~~~~~~~s~pPs~~~f~~d~~~~~~~~l~fL~~~~d~~~vN~yPff 211 (348)
+|++..+-... . ..|. . .+....+++-+.+..|++.+|-|+-.
T Consensus 190 ~i~lia~g~~~--~--~~~~----~---~~w~~~vl~~~~~~iD~is~H~Y~~~ 232 (367)
T d1qw9a2 190 TIELVVCGSSN--R--NMPT----F---AEWEATVLDHTYDHVDYISLHQYYGN 232 (367)
T ss_dssp TCEEEECCCSC--T--TSTT----T---THHHHHHHHHHGGGCSEEEEEEEECC
T ss_pred CeeEEEEeCCC--C--CCcc----c---chHHHHHHhhccccCCcccccCCCCC
Confidence 46654321100 0 0011 1 12334456667778899999977643
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=81.35 E-value=0.42 Score=44.87 Aligned_cols=80 Identities=14% Similarity=0.186 Sum_probs=51.7
Q ss_pred HHHHHHHHhhCCCCeEEEe---------cC----C-------hHHHHHHhcCCCEEEEecCCCchhhhhhc------HHH
Q 018955 49 KRDVIALYNQNNIRRMRLY---------DP----N-------REALEALRGSNIEVMLGLPNNDLRRIASN------QAE 102 (348)
Q Consensus 49 ~~~v~~ll~~~~~~~VRlY---------~~----d-------~~vl~A~~~~glkV~lGv~~~~~~~~a~~------~~~ 102 (348)
.+|+++|++..|++.-|+= +. + .++|.+|.+.||+.++.+..-+++..-.+ ++.
T Consensus 59 y~eDi~l~~~lG~~~yRfSi~WsRI~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hfd~P~~l~~~GGW~~~~~ 138 (462)
T d1wcga1 59 YKEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLGGWVNPIM 138 (462)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTTGGGSTTH
T ss_pred hHHHHHHHHHhCCCEEEeeCcHHHcccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccccchhhhhhcCCcccHHH
Confidence 3678999999999999864 11 1 37999999999999999998766543211 111
Q ss_pred H---HHHHHhhccccCCCceEEEEEeccccc
Q 018955 103 A---NTWVQNNVRNFANNVKFKYIAVGNEAK 130 (348)
Q Consensus 103 a---~~wv~~~v~~~~~~~~I~~I~VGNE~l 130 (348)
+ .+-.+.-+..| ++.|+..+-=||+.
T Consensus 139 v~~F~~Ya~~v~~~f--gd~V~~W~T~NEP~ 167 (462)
T d1wcga1 139 SDYFKEYARVLFTYF--GDRVKWWITFNEPI 167 (462)
T ss_dssp HHHHHHHHHHHHHHH--TTTCCEEEEEECHH
T ss_pred HHHHHHHHHHHHHhc--cccchheeeecCCc
Confidence 1 11111112233 46777777778864
|