Citrus Sinensis ID: 018979

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MMMKLGPSSYRDRTQEFLSVVERLKKSVASANNAPSSSGSSNSSRAVTKPEDRKFAVAIQSEFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTFEIQELTAVIKQDITALNSAVVDLQLLCNSQNESGNISSDTTSHSTTVVDNLKNRLMGTTKEFKEVLTMRTENLKVHENRRQLFSSNASKESTNPFVRQRPLATRLDGGASTASPPPWANGSASSSRLFPSKQADGESLPLLQQQQGQQQQQMVPLQDSYMHSRAEALHNVESTIHELGNIFTQLATMVSQQGEIAIRIDENMDDTLANVEGAQSQLVRYLNSISSNRWLMLKIFFVLVVFLMIFLFFVA
cccccccccccccHHHHHHHHHHHHHcHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
***********DRTQEFLSV***************************************Q*EFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTFEIQELTAVIKQDITALNSAVVDLQLLCN*******************VDNLKNRL***************************************************************************************************************LHNVESTIHELGNIFTQLATMVSQQGEIAIRIDENMDDTLANVEGAQSQLVRYLNSISSNRWLMLKIFFVLVVFLMIFLFFVA
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHx
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MMMKLGPSSYRDRTQEFLSVVERLKKSVASANNAPSSSGSSNSSRAVTKPEDRKFAVAIQSEFNKRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTFEIQELTAVIKQDITALNSAVVDLQLLCNSQNESGNISSDTTSHSTTVVDNLKNRLMGTTKEFKEVLTMRTENLKVHENRRQLFSSNASKESTNPFVRQRPLATRLDGGASTASPPPWANGSASSSRLFPSKQADGESLPLLQQQQGQQQQQMVPLQDSYMHSRAEALHNVESTIHELGNIFTQLATMVSQQGEIAIRIDENMDDTLANVEGAQSQLVRYLNSISSNRWLMLKIFFVLVVFLMIFLFFVA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Syntaxin-32 Vesicle trafficking protein that functions in the secretory pathway.confidentQ9LK09
Integral membrane protein sed5 Required for vesicular transport between the endoplasmic reticulum and the Golgi complex. Acts as a target organelle soluble NSF attachment protein receptor (t-SNARE).probableO13644

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1DN1, chain B
Confidence level:confident
Coverage over the Query: 57-201,214-312
View the alignment between query and template
View the model in PyMOL
Template: 3C98, chain B
Confidence level:confident
Coverage over the Query: 11-20,59-228,248-312
View the alignment between query and template
View the model in PyMOL