Citrus Sinensis ID: 019049

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------
Protein Sequence
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Secondary Structure (PSIPRED)
cEEEEEccccccccccccccccccccccccccccccccEEEEEEEEEcccHHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEEcccccccccccccccccEEccccccHHHHHcccHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHccccEEEccccccHHHHHHHHHcccccccccEEEcccccccHHHHHHccccccEEEEEEEccccccccccHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccEEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccEEEcccccccEEEcccccccccccccEEEEEEEEEcccHHHHHHccccccccccccccccEEEEEEEEEcccccccccccEEEEEEcccccEEEEEEcHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHccccEEEEcccHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHccEEEEEccccccHHcHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccEEEEEEEEccHHHccccc
Coil and Loop (DISEMBL)
mealvcrklgdptvsihdekspivlsktepipqlnsstaVRVRVKATSLNYANYLQILGkyqekpplpfvpgsdysgtvdavgpnvsnfkvgdtvCGFAALGSFAQFIVadqselfpvpkgcdLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLgvdhvvdlsnesvIPSVKEFLKARKlkgvdvlydpvggklTKESLKLLNWGAQILVIGFasgeipvipanIALVKNWTVhglywgsykihrphVLEDSLRELLLWAAKGLITIHishtyspseanlafsaiEDRKVIGKVMIAFddmksirprl
Flexible Loop (DISEMBL)
mealvcrklgdptvsihdekspivlsktepipqlnsstaVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLkarklkgvdvlydpvGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIafddmksirprl
Low Complexity Region (SEG)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQvllvlgaaggvgvaavQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Disordered region (IsUnstruct)
*************************************TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD*********
Disordered Region (DISOPRED)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA***********
Disordered Region (DISEMBL)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Disordered Region (DISPRO)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKS*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	347	2.2.26 [Sep-21-2011]
A7RK30	365	Quinone oxidoreductase-li	N/A	no	0.919	0.873	0.385	6e-52
B0BNC9	350	Quinone oxidoreductase-li	yes	no	0.948	0.94	0.361	1e-47
Q3UNZ8	350	Quinone oxidoreductase-li	yes	no	0.902	0.894	0.363	8e-47
A6QQF5	349	Quinone oxidoreductase-li	yes	no	0.902	0.896	0.360	4e-45
Q8JFV8	484	Synaptic vesicle membrane	yes	no	0.861	0.617	0.284	5e-28
Q6AYT0	329	Quinone oxidoreductase OS	no	no	0.685	0.723	0.327	1e-27
P47199	331	Quinone oxidoreductase OS	no	no	0.703	0.737	0.326	2e-27
Q5R4S7	329	Quinone oxidoreductase OS	yes	no	0.654	0.689	0.314	2e-26
Q08257	329	Quinone oxidoreductase OS	yes	no	0.654	0.689	0.314	6e-26
Q0MVN8	329	Quinone oxidoreductase OS	yes	no	0.752	0.793	0.297	8e-25

>sp|A7RK30|QORL2_NEMVE Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1

 Score =  204 bits (520), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 195/337 (57%), Gaps = 18/337 (5%)

Query: 2   EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY 61
            A++C +LG P V + D+ S      TE +     ++ VRV V +  +N+A+ L+ +GKY
Sbjct: 40  RAVMCNELGKPLV-VEDKFS------TENL----GTSQVRVAVHSCGINFADILKCIGKY 88

Query: 62  QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS-FAQFIVADQSELFPVPK 120
           QEKP LPFVPG++ SG V  VG  V++   GD V G    G   A+  V  Q+ L+ +P 
Sbjct: 89  QEKPELPFVPGTEISGEVVEVGSKVTSLSKGDRVLGVCGQGGGMAEECVLPQTALWKIPS 148

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCGATIIA 179
                 AAAL +++GT+++ L H+A L  GQ +LV  AAG +G+A+V +   V GA +I 
Sbjct: 149 SLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFGAKVIG 208

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
            +R  EK+  ++ +G    +D + E++   VKE        G +V+ + VGG + K+ LK
Sbjct: 209 ASR-KEKLVIVQEIGATATIDYTRENIKDKVKELTDGH---GANVIMEAVGGDVFKQCLK 264

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
            + W   I+ +GFASGEIP IPANI LVKN +  GLYWG++  H P +L +S+ + L + 
Sbjct: 265 CIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYF 324

Query: 300 AKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             G L   +IS ++   + N AF  I  RK  GKV+I
Sbjct: 325 KNGKLKGPYISASFGLDKVNEAFQMILQRKSTGKVVI 361

Nematostella vectensis (taxid: 45351)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|B0BNC9|QORL2_RAT Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 184/343 (53%), Gaps = 14/343 (4%)

Query: 3   ALVCRKLGDPTVSIH-------DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL 55
           A +CR+ G    S H       + K P+ + +  P P       VRV V    +N+A+ L
Sbjct: 13  AWLCRQAGQGQ-SRHYRAAVCTELKQPLTIQEVAPRP--IGPQEVRVDVHFCGINFADNL 69

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSEL 115
              G+YQEKPPLPF PG ++SG V   G +VS  K GD V G +   S A+  + DQ  L
Sbjct: 70  VCRGQYQEKPPLPFTPGMEFSGVVLEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTL 129

Query: 116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCG 174
           + +P+   L  AA LPV++GT+ +A+ HRA++  G+ +LV  AAG  G+A + +   V  
Sbjct: 130 WRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFC 189

Query: 175 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
           A +IA A   EK K     G    V+ S  S+  +VK+ + +    GV+V  D VGG + 
Sbjct: 190 AKVIAAAGSDEKCKLAMQRGAQSGVNYSQGSLKDAVKKLVGS---SGVNVAIDMVGGDVF 246

Query: 235 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRE 294
            +SL+ L W  +I+V+GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+  
Sbjct: 247 LDSLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMST 306

Query: 295 LLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
            L +  +GLI  H    +   + N AF  +  RK  GKV+++ 
Sbjct: 307 ALQYCQQGLIHPHTGAVFKLEKVNDAFLHVMQRKSTGKVLLSL 349

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q3UNZ8|QORL2_MOUSE Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1

 Score =  187 bits (476), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/319 (36%), Positives = 174/319 (54%), Gaps = 6/319 (1%)

Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V
Sbjct: 36  KQPLTIQEVAPRPV--GPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAV 93

Query: 80  DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV 139
              G +VS  K GD V G ++  + A+  + DQ  L+ +P+   L  AA LPV++GT+ +
Sbjct: 94  LETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAIL 153

Query: 140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 198
           A+ HRA++  G+ +LV  AAG  G+A + +   V  A +IA     EK K     G    
Sbjct: 154 AVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFS 213

Query: 199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
           V+ S  S+  +VK+   +    GV+V  D VGG +  ESL+ L W  +I+V+GFA G I 
Sbjct: 214 VNYSQGSLRDAVKKLAGS---GGVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIA 270

Query: 259 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 318
            +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N
Sbjct: 271 SVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKIN 330

Query: 319 LAFSAIEDRKVIGKVMIAF 337
            AF  +  RK  GKV+++ 
Sbjct: 331 DAFLHVMQRKSTGKVLLSL 349

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|A6QQF5|QORL2_BOVIN Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2

 Score =  182 bits (461), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 169/319 (52%), Gaps = 6/319 (1%)

Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+V+ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V
Sbjct: 35  KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMV 92

Query: 80  DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV 139
              G +VS  K GD V G       A+  + D   L+ +P+   L  AAALPV++GT+  
Sbjct: 93  LETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALPVSYGTAIF 152

Query: 140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 198
           AL HRA    G+ +LV  AAG  G+A + +   +  A +IA A   EK +     G    
Sbjct: 153 ALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSS 212

Query: 199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
           V+ S  S+  +V + + +    GV+V+ D VGG +  E+L+ L +  +I+V+GFA G I 
Sbjct: 213 VNYSRGSLKEAVGKLVGS---GGVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIA 269

Query: 259 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 318
            +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N
Sbjct: 270 SVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVN 329

Query: 319 LAFSAIEDRKVIGKVMIAF 337
            AF  +  RK  GKV+++ 
Sbjct: 330 DAFLHVTQRKSTGKVLLSL 348

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1

 Score =  125 bits (314), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 151/320 (47%), Gaps = 21/320 (6%)

Query: 37  STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC 96
           S  V VRVK   LN+A+ +   G Y   P  P  PG + SG ++AVG  V++ KVGD V 
Sbjct: 98  SGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVL 157

Query: 97  GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL 156
                G + + +V   +  F +P+G     AAALPV + T+++ L     L   Q +LV 
Sbjct: 158 VLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVH 217

Query: 157 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 216
            AAGGVG+AA Q+ K      +     A K + +   GV H +D      +  V++    
Sbjct: 218 MAAGGVGIAATQLCKTVNDVTVFGTASASKHEVISQGGVTHPIDYRTRDYVEEVRKI--- 274

Query: 217 RKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFASGEIPVIPA------- 262
              KG+D++ DP+GG        L K   KL+++GA  ++ G       V          
Sbjct: 275 -SPKGLDIVLDPLGGSDTHKGYNLLKPMGKLISYGAANMLAGQKKNLFAVAKTWYQQFSV 333

Query: 263 -NIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA 320
             ++L++ N +V G + G Y      +++ ++  ++    +G +   I  TY   +   A
Sbjct: 334 HTLSLIQGNRSVCGFHLG-YLDSETELIDQAMTAVMDLYRQGKVKPRIDSTYHLEQVGDA 392

Query: 321 FSAIEDRKVIGKVMIAFDDM 340
              +++R  IGK+++  + M
Sbjct: 393 MRRMQERNNIGKIILTTEPM 412

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6AYT0|QOR_RAT Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 130/247 (52%), Gaps = 9/247 (3%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS F
Sbjct: 31  PAPQ---SHQVLIKVHACGVNPVETYIRSGTYSRKPALPYTPGSDVAGIIESVGDGVSAF 87

Query: 90  KVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
           K GD V  F+ + G +A+F ++  +  +P+P+  D    AAL + + T+  AL H A+  
Sbjct: 88  KKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARAR 147

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 208
           +G+ +LV GA+GGVG+A  QI +  G  ++  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYID 207

Query: 209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK 268
            +K    +   KGVDV+ + +  K     LKLL+ G +++V+G   G I + P +  + K
Sbjct: 208 KIK---TSAGDKGVDVIIEMLANKNLSNDLKLLSCGGRVIVVG-CRGSIEINPRD-TMAK 262

Query: 269 NWTVHGL 275
             ++ G+
Sbjct: 263 ETSIIGV 269

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|P47199|QOR_MOUSE Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1

 Score =  124 bits (310), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 131/251 (52%), Gaps = 7/251 (2%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P+PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS F
Sbjct: 31  PVPQ---SHQVLIKVHACGVNPVETYIRSGAYSRKPALPYTPGSDVAGIIESVGDKVSAF 87

Query: 90  KVGDTV-CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
           K GD V C     G +A+F +A    ++P+P+  +    AAL + + T+  AL H A+  
Sbjct: 88  KKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARAR 147

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 208
           +G+ +LV GA+GGVG+A  QI +  G  ++  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYID 207

Query: 209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK 268
            +K  +   K KGVDV+ + +  +     LKLL+ G +++V+G   G I + P +  + K
Sbjct: 208 KIKMSV-GDKDKGVDVIIEMLANENLSNDLKLLSHGGRVVVVG-CRGPIEINPRD-TMAK 264

Query: 269 NWTVHGLYWGS 279
             ++ G+   S
Sbjct: 265 ETSIIGVSLSS 275

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 128/235 (54%), Gaps = 8/235 (3%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           PIP+ + +    ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S F
Sbjct: 31  PIPKDHQAL---IKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGGNASAF 87

Query: 90  KVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
           K GD V   + + G +A++ +A    ++ +P+  D    AA+ + + T++ AL+H A + 
Sbjct: 88  KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVK 147

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 208
           +G+ +LV GA+GGVG+AA QI +  G  ++  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYID 207

Query: 209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 263
            +K+++     KG+DV+ + +      + L LL+ G Q++V+G + G I + P +
Sbjct: 208 KIKKYVGE---KGIDVIIEMLANVNLNKDLSLLSHGGQVIVVG-SRGTIEINPRD 258

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score =  118 bits (296), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 128/235 (54%), Gaps = 8/235 (3%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           PIP+ +    V ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S F
Sbjct: 31  PIPKDHQ---VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 87

Query: 90  KVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
           K GD V   + + G +A++ +A    ++ +P+  D    AA+ + + T++ AL+H A + 
Sbjct: 88  KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 147

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 208
           +G+ +LV GA+GGVG+AA QI +  G  I+  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYID 207

Query: 209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 263
            +K+++     KG+D++ + +      + L LL+ G +++V+G + G I + P +
Sbjct: 208 KIKKYVGE---KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG-SRGTIEINPRD 258

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q0MVN8|QOR_PIG Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1

 Score =  114 bits (286), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 142/276 (51%), Gaps = 15/276 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   K G P V        I      PIP+ N    V ++V A  +N  +     G 
Sbjct: 8   MSAIRVFKFGGPEVMKLQSDVAI------PIPKDNQ---VLIKVHACGVNPVDTYIRSGT 58

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVP 119
           +  KP LP+ PG D +G V+AVG +VS+FK GD V   + L G +A++ +A    ++ +P
Sbjct: 59  HNMKPLLPYTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYAEYALAADDTVYMLP 118

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
           +  D    AA+ + + T+ +AL+H A + +G+++L+ GA+GGVG+AA QI +  G  ++ 
Sbjct: 119 EKLDFKQGAAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGIAACQIARAYGLKVLG 178

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
            A   E    +   G   V +    + I  +K   K+   KG+DV+ + +        L 
Sbjct: 179 TAGTEEGQNIVLQNGAHEVFNHREVNYIDKIK---KSVGEKGIDVIIEMLANVNLSNDLN 235

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL 275
           LL+ G +++++G + G I + P +  + K  ++ G+
Sbjct: 236 LLSHGGRVIIVG-SRGPIEINPRD-TMTKGSSIKGV 269

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
224127957	352	predicted protein [Populus trichocarpa]	1.0	0.985	0.818	1e-164
255559759	344	quinone oxidoreductase, putative [Ricinu	0.991	1.0	0.804	1e-154
356509112	346	PREDICTED: quinone oxidoreductase-like p	0.997	1.0	0.815	1e-148
15228926	348	GroES-like zinc-binding alcohol dehydrog	1.0	0.997	0.784	1e-147
297820406	348	oxidoreductase [Arabidopsis lyrata subsp	1.0	0.997	0.778	1e-147
388516337	346	unknown [Lotus japonicus]	0.997	1.0	0.772	1e-147
356516200	347	PREDICTED: quinone oxidoreductase-like p	0.997	0.997	0.801	1e-145
225448349	345	PREDICTED: quinone oxidoreductase-like p	0.994	1.0	0.798	1e-144
449447499	347	PREDICTED: quinone oxidoreductase-like p	0.997	0.997	0.755	1e-143
242077252	346	hypothetical protein SORBIDRAFT_06g02915	0.965	0.968	0.720	1e-136

>gi|224127957|ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|118487115|gb|ABK95387.1| unknown [Populus trichocarpa] gi|222871000|gb|EEF08131.1| predicted protein [Populus trichocarpa]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 288/352 (81%), Positives = 315/352 (89%), Gaps = 5/352 (1%)

Query: 1   MEALVCRKLGDPT-----VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL 55
           MEALVC+KLGDPT     +S  D  SPI+LSKT PIPQL S T+VRVRVKATSLNYANYL
Sbjct: 1   MEALVCKKLGDPTALKSSISEADNDSPIILSKTHPIPQLKSPTSVRVRVKATSLNYANYL 60

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSEL 115
           QILGKYQEKPPLPF+PGSDYSG VDAVG  VS  KVGD VC FAALGSFA+FIVADQ+EL
Sbjct: 61  QILGKYQEKPPLPFIPGSDYSGIVDAVGSGVSLLKVGDRVCSFAALGSFAEFIVADQAEL 120

Query: 116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
           F VP GCDL+AA ALPVAFGTSHVALVHRAQL+SGQVLLVLGAAGGVG++AVQIGKVCGA
Sbjct: 121 FKVPDGCDLVAAGALPVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLSAVQIGKVCGA 180

Query: 176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235
            +IAVARG EK++FLKSLGVDHVVD S ESVI SVK+FLKARKLKGVDVLYDPVGGKLTK
Sbjct: 181 VVIAVARGDEKVQFLKSLGVDHVVDSSKESVIASVKDFLKARKLKGVDVLYDPVGGKLTK 240

Query: 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 295
           ES+KLLNWGAQILVIGFASG++PVIPANIALVKNWTVHGLYWGSYKIHRP VLEDS+REL
Sbjct: 241 ESMKLLNWGAQILVIGFASGDVPVIPANIALVKNWTVHGLYWGSYKIHRPVVLEDSIREL 300

Query: 296 LLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           L W AKG ITIHISHTY+ SEA+LAF+AI+DRK IGKVMI  DD +S++ +L
Sbjct: 301 LSWVAKGRITIHISHTYNLSEASLAFAAIKDRKAIGKVMITIDDERSVKSKL 352

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559759|ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus communis] gi|223540030|gb|EEF41608.1| quinone oxidoreductase, putative [Ricinus communis]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 279/347 (80%), Positives = 309/347 (89%), Gaps = 3/347 (0%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEALVC++LGDP   +     PI ++K  PIPQL+S TAVRVRVKATSLNYANYLQILGK
Sbjct: 1   MEALVCKRLGDP---VEQNSPPIEITKNHPIPQLDSPTAVRVRVKATSLNYANYLQILGK 57

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           YQEKPPLPF+PGSDYSG VDAV PNVS FKVGD VC FA+LGSFAQFIVADQS+L+PVP+
Sbjct: 58  YQEKPPLPFIPGSDYSGIVDAVAPNVSAFKVGDRVCSFASLGSFAQFIVADQSQLYPVPE 117

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           GCDL+AAAALPVAFGTSHVALVHRA L+S QVLLVLGAAGGVG++AVQIGKVCGA I+AV
Sbjct: 118 GCDLVAAAALPVAFGTSHVALVHRAHLTSSQVLLVLGAAGGVGLSAVQIGKVCGAIIVAV 177

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
            RG EK++ LKSLGVDHVVD S E+VI SVK+FL ++KLKGVDVLYDPVGGKLTK+SLKL
Sbjct: 178 VRGFEKVELLKSLGVDHVVDSSKENVIASVKDFLLSKKLKGVDVLYDPVGGKLTKDSLKL 237

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           LNWGAQILVIGFASGEIPVIPANIALVKNWT+HGLYWGSY+IHRP VLEDSLRELL W A
Sbjct: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTIHGLYWGSYRIHRPGVLEDSLRELLSWMA 297

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           KG ITIHISHTYS +EA+LAFSAI DRK IGKVMIAFD  +S+  +L
Sbjct: 298 KGQITIHISHTYSLAEASLAFSAIRDRKAIGKVMIAFDGGRSMTSKL 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509112|ref|XP_003523296.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 283/347 (81%), Positives = 314/347 (90%), Gaps = 1/347 (0%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEAL+CRKLGDPTVS+ D  SPIVLSK  PIPQL+S TAVRVR+KATSLN+ANYLQILGK
Sbjct: 1   MEALLCRKLGDPTVSLEDNNSPIVLSKNHPIPQLDSPTAVRVRIKATSLNFANYLQILGK 60

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           YQEKP LPF+PGSD+SG VDAVGP VSNF+VGD VC FAALGSFAQFIV DQS+LF VP+
Sbjct: 61  YQEKPSLPFIPGSDFSGFVDAVGPKVSNFRVGDAVCSFAALGSFAQFIVVDQSQLFQVPQ 120

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           GCDL+AA AL VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVG+AAVQIGK CGA +IAV
Sbjct: 121 GCDLVAAGALAVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAV 180

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           ARGAEK++ LKSLGVDHVVDL NE+V  S+K+FL+AR+LKG+DVLYDPVGGKLTKESL+L
Sbjct: 181 ARGAEKVQLLKSLGVDHVVDLGNENVTQSIKQFLQARRLKGIDVLYDPVGGKLTKESLRL 240

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L WGA IL+IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP VLEDSL+ELL W A
Sbjct: 241 LKWGAHILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPGVLEDSLKELLSWLA 300

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           +GLI+IHISH+Y  SEA LAFSAI+DRKVIGKVMI FD+ K+ R +L
Sbjct: 301 RGLISIHISHSYPLSEAYLAFSAIKDRKVIGKVMIVFDE-KTTRSKL 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228926|ref|NP_191205.1| GroES-like zinc-binding alcohol dehydrogenase-like protein [Arabidopsis thaliana] gi|7594524|emb|CAB88049.1| quinone reductase-like protein [Arabidopsis thaliana] gi|24030344|gb|AAN41337.1| putative quinone reductase [Arabidopsis thaliana] gi|62320240|dbj|BAD94498.1| quinone reductase-like protein [Arabidopsis thaliana] gi|332646003|gb|AEE79524.1| GroES-like zinc-binding alcohol dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/348 (78%), Positives = 308/348 (88%), Gaps = 1/348 (0%)

Query: 1   MEALVCRKLGDPTVSI-HDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALVCRKLGDPT +     +SP+ +SKT PIP LNS T+VRVRV ATSLNYANYLQILG
Sbjct: 1   MEALVCRKLGDPTATNPGSPESPVEVSKTHPIPSLNSDTSVRVRVIATSLNYANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           KYQEKPPLPF+PGSDYSG VDA+GP V+ F+VGD VC FA LGSFAQFIVADQS LF VP
Sbjct: 61  KYQEKPPLPFIPGSDYSGIVDAIGPAVTKFRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
           + CD++AAAALPVAFGTSHVALVHRA+L+SGQVLLVLGAAGGVG+AAVQIGKVCGA +IA
Sbjct: 121 ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           VARG EKI+ LKS+GVDHVVDL  E+VI SVKEF+K RKLKGVDVLYDPVGGKLTKES+K
Sbjct: 181 VARGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLKGVDVLYDPVGGKLTKESMK 240

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
           +L WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY+IH+P+VLEDS++ELL W 
Sbjct: 241 VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query: 300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           ++GLITIHISHTYS S+ANLAF  ++DRK IGKVMIA D   ++  +L
Sbjct: 301 SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820406|ref|XP_002878086.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297323924|gb|EFH54345.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 271/348 (77%), Positives = 308/348 (88%), Gaps = 1/348 (0%)

Query: 1   MEALVCRKLGDPTVS-IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALVCRKLGDPT + + + +SP+ +SKT PIP LNS TAVRVRV ATSLNYANYLQILG
Sbjct: 1   MEALVCRKLGDPTATNLGNPESPVEVSKTHPIPSLNSDTAVRVRVIATSLNYANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           KYQEKPPLPF+PGSDYSG VDA+GP V+  +VGD VC FA LGSFAQFIVADQS LF VP
Sbjct: 61  KYQEKPPLPFIPGSDYSGIVDAIGPAVTKLRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
           + CD++AAAALPVAFGTSHVALVHRA+L+SGQVLLVLGAAGGVG+AAVQIGKVCGA +IA
Sbjct: 121 ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           V RG EKI+ LKS+GVDHVVDL  E+VI SVKEF+K RKL+GVDVLYDPVGGKLTKES+K
Sbjct: 181 VGRGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLRGVDVLYDPVGGKLTKESMK 240

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
           +L WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY+IH+P+VLEDS++ELL W 
Sbjct: 241 VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query: 300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           ++GLITIHISHTYS S+ANLAF  ++DRK IGKVMIA D   ++  +L
Sbjct: 301 SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516337|gb|AFK46230.1| unknown [Lotus japonicus]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/347 (77%), Positives = 308/347 (88%), Gaps = 1/347 (0%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEALVC+KLGDPT+ + D  +PI+LSK  PIPQL+S T+VRV++KATSLN+ANYLQILGK
Sbjct: 1   MEALVCKKLGDPTLGLEDNNTPIILSKNHPIPQLDSPTSVRVKIKATSLNFANYLQILGK 60

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           YQEKP LPF+PGSDYSG VDAVG  V +F+VGD VC F ALGSFA+++V D+++LF VP 
Sbjct: 61  YQEKPTLPFIPGSDYSGIVDAVGSKVESFRVGDPVCSFIALGSFAEYLVVDETQLFRVPD 120

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           GCDL++A AL VAFGTSHVALVHRAQL+SGQVLLVLGAAGGVG+AAVQIGK CGA +IAV
Sbjct: 121 GCDLVSAGALAVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAV 180

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           ARGAEK++ LKS GVDHVVDL+NE+V  SVKEFLKARKLKG+DVLYDPVGGKLTKE L+L
Sbjct: 181 ARGAEKVQLLKSHGVDHVVDLTNENVTESVKEFLKARKLKGIDVLYDPVGGKLTKECLRL 240

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L WGA IL+IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP VLEDSL+ELL W A
Sbjct: 241 LKWGANILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPRVLEDSLKELLSWLA 300

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           +G+I++HISH+Y  SEANLAF AI+DRKVIGKVMI FD+ KS R +L
Sbjct: 301 RGMISVHISHSYPLSEANLAFGAIKDRKVIGKVMIVFDE-KSTRSKL 346

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516200|ref|XP_003526784.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max]

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/348 (80%), Positives = 311/348 (89%), Gaps = 2/348 (0%)

Query: 1   MEALVCRKLGDPTVSIHD-EKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEAL+CRKLGDPTVS+ D + SPIVLSK  PIPQL+S TAVRVR+KATSLN+ANYLQILG
Sbjct: 1   MEALLCRKLGDPTVSLEDNDDSPIVLSKNHPIPQLDSPTAVRVRIKATSLNFANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           KYQEKP LPF+PGSD+SG VDAVG  VS F+VGD VC FA LGSFAQFIV D+S+LF VP
Sbjct: 61  KYQEKPSLPFIPGSDFSGFVDAVGSKVSKFRVGDAVCSFAGLGSFAQFIVVDESQLFQVP 120

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
           +GCDL+AA AL VA GTSHVALVHRAQLSSGQVLLVLGAAGGVG+AAVQIGK CGA +IA
Sbjct: 121 QGCDLVAAGALAVASGTSHVALVHRAQLSSGQVLLVLGAAGGVGLAAVQIGKACGAIVIA 180

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           VARGAEK++ LKSLGVDHVVDL NE+V  S+K+FL+ARKLKG+DVLYDPVGGKLTKESL+
Sbjct: 181 VARGAEKVQLLKSLGVDHVVDLGNENVTQSIKQFLQARKLKGIDVLYDPVGGKLTKESLR 240

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
           LL WGA IL+IGFASGEIP+IPANIALVKNWTVHGLYWGSYKIHRP VLEDSL+ELL W 
Sbjct: 241 LLKWGAHILIIGFASGEIPLIPANIALVKNWTVHGLYWGSYKIHRPGVLEDSLKELLSWL 300

Query: 300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           A+GLI+IHISH+Y  SEANLAFSAI+DRKVIGKVMI FD+ K  R +L
Sbjct: 301 ARGLISIHISHSYPLSEANLAFSAIKDRKVIGKVMIVFDE-KPTRSKL 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448349|ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Vitis vinifera] gi|297736646|emb|CBI25517.3| unnamed protein product [Vitis vinifera]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/347 (79%), Positives = 312/347 (89%), Gaps = 2/347 (0%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEALVCRK+GDPT+S  DE SPI +S +  IP LNS TAVRVRV+ATSLNYANYLQILGK
Sbjct: 1   MEALVCRKVGDPTLS--DETSPISVSASHLIPSLNSPTAVRVRVRATSLNYANYLQILGK 58

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           YQEKPP PF+PGSDYSG V++VGP+VS FK+GDTVC  AALGSFAQ+IV D++ELF VP 
Sbjct: 59  YQEKPPHPFIPGSDYSGIVESVGPSVSMFKIGDTVCSVAALGSFAQYIVVDETELFRVPD 118

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           GCDL+AAAALPVAFGTSHVALVHRAQL+S QVLLVLGAAGGVG+AAVQIGKVCGAT+IAV
Sbjct: 119 GCDLVAAAALPVAFGTSHVALVHRAQLTSAQVLLVLGAAGGVGLAAVQIGKVCGATVIAV 178

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           ARGA K++ LKSLGVDHVVD S E+V  SVK FLKA+KLKGVDVLYDPVGGKLTKE++KL
Sbjct: 179 ARGAGKVQILKSLGVDHVVDSSIENVTESVKNFLKAKKLKGVDVLYDPVGGKLTKETMKL 238

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           LNWGA ILVIGFASGE+PVIPANIALVKNWTVHGLYWGSY+IHRP VLEDS++ELL W A
Sbjct: 239 LNWGAHILVIGFASGEVPVIPANIALVKNWTVHGLYWGSYRIHRPGVLEDSMKELLSWLA 298

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           +GLI IHISH+Y+ SEA+ AFSAI+DRK IGKVMIAFDD K++R +L
Sbjct: 299 RGLIEIHISHSYNLSEAHFAFSAIKDRKAIGKVMIAFDDHKTVRSKL 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447499|ref|XP_004141505.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Cucumis sativus] gi|449510675|ref|XP_004163730.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Cucumis sativus]

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 263/348 (75%), Positives = 302/348 (86%), Gaps = 2/348 (0%)

Query: 1   MEALVCRKLGDPTVSI-HDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALVCRKLGDPT S   DE SP+VLSK  PIP LNS T+VRV++KATSLNYANYLQILG
Sbjct: 1   MEALVCRKLGDPTTSSPSDENSPVVLSKNHPIPPLNSPTSVRVQIKATSLNYANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           KYQEKPPLPF+PGSDYSG V AVG  VS F+VGD VC FA  GSFAQFIV D+S LF VP
Sbjct: 61  KYQEKPPLPFIPGSDYSGIVVAVGSKVSKFRVGDRVCSFAGDGSFAQFIVDDESRLFRVP 120

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
            GCDL+AA ALPVAFGTSHVALVHRA L+ GQVLL+LGAAGGVG+AAVQIGKVCGA +IA
Sbjct: 121 DGCDLVAAGALPVAFGTSHVALVHRANLAPGQVLLILGAAGGVGLAAVQIGKVCGAVVIA 180

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           VARGA+K+++LKSLGVDHVVDL++++VI +VK FLK RKLKGVDVLYDPVGGKLTK+S+K
Sbjct: 181 VARGAKKVEYLKSLGVDHVVDLNHQNVIENVKAFLKERKLKGVDVLYDPVGGKLTKDSMK 240

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
           LLNW A ILVIGFASGEIPVIP NIALVKNWTVHGLYWGSY IHRP VLE+S+ +LL W 
Sbjct: 241 LLNWSANILVIGFASGEIPVIPTNIALVKNWTVHGLYWGSYGIHRPQVLEESMNQLLSWL 300

Query: 300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
           + GLI +HISH YSP EANLAF AI++R+ +GKV++ F+D K+++ +L
Sbjct: 301 STGLIRVHISHIYSPLEANLAFHAIKNREAVGKVVLVFED-KAVKSKL 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242077252|ref|XP_002448562.1| hypothetical protein SORBIDRAFT_06g029150 [Sorghum bicolor] gi|241939745|gb|EES12890.1| hypothetical protein SORBIDRAFT_06g029150 [Sorghum bicolor]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/336 (72%), Positives = 279/336 (83%), Gaps = 1/336 (0%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIV-LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALV R+LGDPT++   E SP   +S   P+P+++S TAVRVRV ATSLN+A +LQ+ G
Sbjct: 1   MEALVVRRLGDPTLAPGGEASPFAAVSGDHPVPEISSPTAVRVRVAATSLNFATFLQVQG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           KYQE+PPLPFVPGSDYSG VDAVGP V   + GD VC F  LGSFA FIVA++ +LF VP
Sbjct: 61  KYQERPPLPFVPGSDYSGVVDAVGPGVRGLRPGDRVCSFTGLGSFADFIVAEEKQLFLVP 120

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
            GCDL+ A ALPVAFGTSH+ALVHRAQL +GQVLLVLGAAGGVGV+AVQIGKVCGA +IA
Sbjct: 121 DGCDLVTAGALPVAFGTSHLALVHRAQLKAGQVLLVLGAAGGVGVSAVQIGKVCGAVVIA 180

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           VARGAEK ++LKS+G DHVVD S ++V+ S K FLKAR LKGVDVLYDPVGGKLT++SLK
Sbjct: 181 VARGAEKSEYLKSIGADHVVDSSKDNVVESAKSFLKARGLKGVDVLYDPVGGKLTQDSLK 240

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
           LL+WGA ILVIGFASG++PVI ANIALVKNWTVHGLYWGSY IHRP VL DSL ELL W 
Sbjct: 241 LLSWGAHILVIGFASGDVPVIRANIALVKNWTVHGLYWGSYLIHRPRVLIDSLNELLSWL 300

Query: 300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           +KGLI + ISH Y   EA+LAFSA+ DRK +GKVMI
Sbjct: 301 SKGLIKVQISHCYRLVEAHLAFSALRDRKAVGKVMI 336

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	347
TAIR|locus:2102504	348	AT3G56460 [Arabidopsis thalian	1.0	0.997	0.741	1.1e-135
UNIPROTKB|Q48PR7	325	qor2 "Quinone oxidoreductase"	0.927	0.990	0.340	1.3e-50
TIGR_CMR|SPO_2960	318	SPO_2960 "oxidoreductase, zinc	0.893	0.974	0.368	1.3e-50
RGD|1304982	350	RGD1304982 "similar to RIKEN c	0.899	0.891	0.349	7.1e-45
MGI|MGI:2448516	350	BC026585 "cDNA sequence BC0265	0.899	0.891	0.342	2.4e-44
UNIPROTKB|F1PV34	350	LOC610994 "Uncharacterized pro	0.904	0.897	0.337	6.4e-44
UNIPROTKB|J9P068	375	LOC610994 "Uncharacterized pro	0.904	0.837	0.337	6.4e-44
UNIPROTKB|Q0BWZ7	329	HNE_3323 "Putative quinone oxi	0.847	0.893	0.356	8.1e-44
UNIPROTKB|F1NVJ2	347	LOC424430 "Uncharacterized pro	0.873	0.873	0.360	3.5e-43
UNIPROTKB|A6QQF5	349	A6QQF5 "Quinone oxidoreductase	0.899	0.893	0.339	1.5e-42

TAIR|locus:2102504 AT3G56460 [Arabidopsis thaliana (taxid:3702)]

 Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
 Identities = 258/348 (74%), Positives = 292/348 (83%)

Query:     1 MEALVCRKLGDPTVSIHDE-KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
             MEALVCRKLGDPT +     +SP+ +SKT PIP LNS T+VRVRV ATSLNYANYLQILG
Sbjct:     1 MEALVCRKLGDPTATNPGSPESPVEVSKTHPIPSLNSDTSVRVRVIATSLNYANYLQILG 60

Query:    60 KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
             KYQEKPPLPF+PGSDYSG VDA+GP V+ F+VGD VC FA LGSFAQFIVADQS LF VP
Sbjct:    61 KYQEKPPLPFIPGSDYSGIVDAIGPAVTKFRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query:   120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIA 179
             + CD++AAAALPVAFGTSHVALVHRA+L+SGQ                QIGKVCGA +IA
Sbjct:   121 ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query:   180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
             VARG EKI+ LKS+GVDHVVDL  E+VI SVKEF+K RKLKGVDVLYDPVGGKLTKES+K
Sbjct:   181 VARGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLKGVDVLYDPVGGKLTKESMK 240

Query:   240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
             +L WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY+IH+P+VLEDS++ELL W 
Sbjct:   241 VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query:   300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 347
             ++GLITIHISHTYS S+ANLAF  ++DRK IGKVMIA D   ++  +L
Sbjct:   301 SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

UNIPROTKB|Q48PR7 qor2 "Quinone oxidoreductase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 114/335 (34%), Positives = 178/335 (53%)

Query:     1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
             M+AL+C+  G P        S +VL    P P++  +  + + V A  +N+ + L I GK
Sbjct:     1 MKALLCKAFG-PA-------STLVLEDV-PGPEIKKNE-ILLDVHAAGVNFPDTLIIEGK 50

Query:    61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
             YQ KPP PF PG + +G + AVG  V++ K GD V      GSFA+ +      + P+P 
Sbjct:    51 YQFKPPFPFSPGGEAAGVISAVGEKVTHLKPGDRVMALTGWGSFAEQVAVPGYNVLPIPT 110

Query:   121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 180
               D   AAA  + +GTS  AL  RA L +G+                +IGK  GA +IA 
Sbjct:   111 SMDFTTAAAFSMTYGTSMHALKQRANLQAGETLLVLGASGGVGLAAVEIGKALGARVIAA 170

Query:   181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
             A  AEK++  K+ G D +++ S  S+   VK         G DV+YDPVGG L  ++++ 
Sbjct:   171 ASSAEKLEVAKNAGADELINYSETSLKDEVKRLTNDN---GADVIYDPVGGDLFDQAIRA 227

Query:   241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
             + W  ++LV+GFASG IP +P N+ L+K  +V G++WGS+   +P     + ++L  W  
Sbjct:   228 IAWNGRLLVVGFASGRIPDLPVNLTLLKGASVVGVFWGSFAQRQPQDNAANFKQLFAWFE 287

Query:   301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             +G +   +S  Y   +A  A   + +R+ +GKV++
Sbjct:   288 EGKLKPLVSTVYPLEKAGEAIDLLGERRAVGKVVV 322

GO:0003960 "NADPH:quinone reductase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=ISS

TIGR_CMR|SPO_2960 SPO_2960 "oxidoreductase, zinc-binding dehydrogenase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 119/323 (36%), Positives = 175/323 (54%)

Query:    15 SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74
             ++    SP  L   +P+P+  +   VR+ ++A  LN+A+ L   G YQ+ PP PF  G +
Sbjct:     5 TVQSAGSPAQLID-QPVPE-PAPGQVRIDIRACGLNFADLLMQKGTYQDTPPAPFTLGME 62

Query:    75 YSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAF 134
              +GT++A+G  VS+ KVGD +  +   G  A+  V D     P+P       AAA  +A+
Sbjct:    63 VAGTINALGTGVSHLKVGDRIAIYTGQGGLAEQGVFDADRALPLPDTMSFEHAAAFQIAY 122

Query:   135 GTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLG 194
             GTSH+AL HRA+L  G+                +IGK+ GA +IA ARGA+K++  +  G
Sbjct:   123 GTSHMALDHRARLQPGETLLVTGAAGGVGLTAVEIGKLMGARVIAQARGADKLEIARQAG 182

Query:   195 VDHVVDLSNESVIPSVKEFLKARKLK--GVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 252
              D ++D   +         L+AR L   GVDV+YD +GG + K + +  N  A++L IGF
Sbjct:   183 ADILIDADED---------LRARLLDLGGVDVVYDAIGGDVFKAAFRAANPEARLLPIGF 233

Query:   253 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY 312
             A GE+P IPAN  LV+N TV G Y G Y   RP V+ +S + LL W  +G +  H+SH  
Sbjct:   234 AGGEVPQIPANHLLVRNLTVIGFYIGGYLSFRPEVIRNSFQTLLDWYQQGRLHPHVSHIL 293

Query:   313 SPSEANLAFSAIEDRKVIGKVMI 335
                 A      + +R   GKV+I
Sbjct:   294 PLERAAEGLELLRNRTATGKVVI 316

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

RGD|1304982 RGD1304982 "similar to RIKEN cDNA 2810025M15" [Rattus norvegicus (taxid:10116)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 111/318 (34%), Positives = 165/318 (51%)

Query:    20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
             K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V
Sbjct:    36 KQPLTIQEVAPRPI--GPQEVRVDVHFCGINFADNLVCRGQYQEKPPLPFTPGMEFSGVV 93

Query:    80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV 139
                G +VS  K GD V G +   S A+  + DQ  L+ +P+   L  AA LPV++GT+ +
Sbjct:    94 LEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAIL 153

Query:   140 ALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 198
             A+ HRA++  G+                 +   V  A +IA A   EK K     G    
Sbjct:   154 AVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFCAKVIAAAGSDEKCKLAMQRGAQSG 213

Query:   199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
             V+ S  S+  +VK+ + +    GV+V  D VGG +  +SL+ L W  +I+V+GFA G I 
Sbjct:   214 VNYSQGSLKDAVKKLVGS---SGVNVAIDMVGGDVFLDSLRSLAWEGRIVVLGFAGGNIA 270

Query:   259 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 318
              +P+N+ L+KN +  GLYWG Y+     V   S+   L +  +GLI  H    +   + N
Sbjct:   271 SVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTALQYCQQGLIHPHTGAVFKLEKVN 330

Query:   319 LAFSAIEDRKVIGKVMIA 336
              AF  +  RK  GKV+++
Sbjct:   331 DAFLHVMQRKSTGKVLLS 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

MGI|MGI:2448516 BC026585 "cDNA sequence BC026585" [Mus musculus (taxid:10090)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 109/318 (34%), Positives = 164/318 (51%)

Query:    20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
             K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V
Sbjct:    36 KQPLTIQEVAPRPV--GPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAV 93

Query:    80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV 139
                G +VS  K GD V G ++  + A+  + DQ  L+ +P+   L  AA LPV++GT+ +
Sbjct:    94 LETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAIL 153

Query:   140 ALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 198
             A+ HRA++  G+                 +   V  A +IA     EK K     G    
Sbjct:   154 AVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFS 213

Query:   199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
             V+ S  S+  +VK+   +    GV+V  D VGG +  ESL+ L W  +I+V+GFA G I 
Sbjct:   214 VNYSQGSLRDAVKKLAGSG---GVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIA 270

Query:   259 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 318
              +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N
Sbjct:   271 SVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKIN 330

Query:   319 LAFSAIEDRKVIGKVMIA 336
              AF  +  RK  GKV+++
Sbjct:   331 DAFLHVMQRKSTGKVLLS 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1PV34 LOC610994 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 108/320 (33%), Positives = 163/320 (50%)

Query:    18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
             + K P+ + +  P P       VRV V    +N+A+ L   G+YQEKP LPF PG ++SG
Sbjct:    34 EPKQPLAVEEVGPRPVRPHE--VRVDVHFCGVNFADILVCRGQYQEKPQLPFTPGMEFSG 91

Query:    78 TVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTS 137
              V   G +VS  K GD V G +     A+  + DQ  L+ +P+G  L  AA LPV++GT+
Sbjct:    92 IVLETGADVSTVKEGDRVIGVSGFNGMAEECIIDQKTLWQIPEGVSLREAATLPVSYGTA 151

Query:   138 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVD 196
              +AL HRA    G+                 +   +  A +IA     EK + +   G  
Sbjct:   152 LLALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAVGSDEKCQLVMQKGAQ 211

Query:   197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE 256
              VV+ S   +  +V++ + +    GV+V+ D VGG +  E+L+ L W  +I+V+GFA G 
Sbjct:   212 SVVNYSQGGLKEAVRKLVGS---VGVNVVIDTVGGDVFLEALRSLAWEGRIVVVGFAGGT 268

Query:   257 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316
             I  +PAN+ L+KN +  GLYW  YK     +   +L   L +  +G I  HI   +   +
Sbjct:   269 IASVPANLLLLKNVSAMGLYWSRYKEQNFPIFSRTLSSALQYCQQGRIQPHIGAVFKLEK 328

Query:   317 ANLAFSAIEDRKVIGKVMIA 336
              N AF  +  RK  GKV+I+
Sbjct:   329 VNDAFLHVIQRKSTGKVLIS 348

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9P068 LOC610994 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 108/320 (33%), Positives = 163/320 (50%)

Query:    18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
             + K P+ + +  P P       VRV V    +N+A+ L   G+YQEKP LPF PG ++SG
Sbjct:    59 EPKQPLAVEEVGPRPVRPHE--VRVDVHFCGVNFADILVCRGQYQEKPQLPFTPGMEFSG 116

Query:    78 TVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTS 137
              V   G +VS  K GD V G +     A+  + DQ  L+ +P+G  L  AA LPV++GT+
Sbjct:   117 IVLETGADVSTVKEGDRVIGVSGFNGMAEECIIDQKTLWQIPEGVSLREAATLPVSYGTA 176

Query:   138 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVD 196
              +AL HRA    G+                 +   +  A +IA     EK + +   G  
Sbjct:   177 LLALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAVGSDEKCQLVMQKGAQ 236

Query:   197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE 256
              VV+ S   +  +V++ + +    GV+V+ D VGG +  E+L+ L W  +I+V+GFA G 
Sbjct:   237 SVVNYSQGGLKEAVRKLVGS---VGVNVVIDTVGGDVFLEALRSLAWEGRIVVVGFAGGT 293

Query:   257 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316
             I  +PAN+ L+KN +  GLYW  YK     +   +L   L +  +G I  HI   +   +
Sbjct:   294 IASVPANLLLLKNVSAMGLYWSRYKEQNFPIFSRTLSSALQYCQQGRIQPHIGAVFKLEK 353

Query:   317 ANLAFSAIEDRKVIGKVMIA 336
              N AF  +  RK  GKV+I+
Sbjct:   354 VNDAFLHVIQRKSTGKVLIS 373

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q0BWZ7 HNE_3323 "Putative quinone oxidoreductase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 107/300 (35%), Positives = 159/300 (53%)

Query:    40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
             V V+VKA  +NY + L I   YQ KPP PF PG + +G V AVG  VS+ K GD V    
Sbjct:    30 VLVQVKACGVNYPDVLIIQDMYQFKPPRPFSPGGEVAGIVSAVGEGVSHVKPGDRVLAST 89

Query:   100 ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
               G  A++ +A    + P+P+G     AAA  + +GTS+ A+  R     G+        
Sbjct:    90 GNGGMAEYCLAAAHGVMPIPEGMPFEEAAAFLMTYGTSYYAIKDRGDPKPGEKLLVLGAA 149

Query:   160 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF---LKA 216
                     ++GK  G  +IA A   EK+ F  S G DH +  + E      K+F   +KA
Sbjct:   150 GGVGIAAVELGKAMGLEVIAAASSQEKVDFCLSKGADHGLVYARELDRDGQKKFSDDIKA 209

Query:   217 RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 276
                 GVD++YD VGG   + +++ +NW  + LVIGF +G IP +P N+ L+K+  V G++
Sbjct:   210 VSGGGVDIIYDGVGGNYAEPAVRAMNWEGRFLVIGFPAG-IPKLPLNLTLLKSCDVRGVF 268

Query:   277 WGSYKIHRPHVLEDSLRELL-LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             WG+     P   + +++EL  L+ A G I  HIS +Y   +A  A   ++DRK  GKV++
Sbjct:   269 WGAAVARDPKAHQQNVKELFDLYKA-GKIRPHISGSYPMEKAADAIRELQDRKAQGKVVV 327

GO:0003960 "NADPH:quinone reductase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|F1NVJ2 LOC424430 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 111/308 (36%), Positives = 156/308 (50%)

Query:    30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
             P P+L     VRVRV  + LN+A+ L   G YQEK   PF PG ++SGTV   G NVS  
Sbjct:    42 PAPRLQPRQ-VRVRVHYSGLNFADILACQGLYQEKHAPPFTPGMEFSGTVMETGENVSAV 100

Query:    90 KVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 149
             K G  V G   + + A+  V D+  L+ +P       AA LPVA+GT+ +AL HRA L  
Sbjct:   101 KEGHRVIGVTGISAMAEECVVDEKALWQIPDNVSSEDAAVLPVAYGTAWLALHHRAHLQP 160

Query:   150 GQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 208
              +                 +   V  A +IA A    K + + + G  H V+ S  S+  
Sbjct:   161 RETVLVTAGAGATGLAIIDLAVNVFQAKVIAAAGSDPKCQLVLANGASHAVNYSQNSLRE 220

Query:   209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK 268
              V      R   GVDV  + VGG + K  L+ L W  +I+V+GFA G+IP IPAN+ L+K
Sbjct:   221 QVTALTGGR---GVDVAIEAVGGDIFKAVLQSLAWEGRIVVMGFAGGKIPSIPANLLLLK 277

Query:   269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 328
             N +  G+YW  Y+     +   ++  LL +  +G I  HI   +   E N AF+ +  RK
Sbjct:   278 NVSAMGVYWSRYQQEDFPLFSSAMSSLLQYGREGKIHPHIGAVFKLEEVNEAFNHVLQRK 337

Query:   329 VIGKVMIA 336
               GKV+I+
Sbjct:   338 STGKVIIS 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|A6QQF5 A6QQF5 "Quinone oxidoreductase-like protein 2" [Bos taurus (taxid:9913)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 108/318 (33%), Positives = 159/318 (50%)

Query:    20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
             K P+V+ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V
Sbjct:    35 KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMV 92

Query:    80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV 139
                G +VS  K GD V G       A+  + D   L+ +P+   L  AAALPV++GT+  
Sbjct:    93 LETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALPVSYGTAIF 152

Query:   140 ALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 198
             AL HRA    G+                 +   +  A +IA A   EK +     G    
Sbjct:   153 ALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSS 212

Query:   199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
             V+ S  S+  +V + + +    GV+V+ D VGG +  E+L+ L +  +I+V+GFA G I 
Sbjct:   213 VNYSRGSLKEAVGKLVGSG---GVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIA 269

Query:   259 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 318
              +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N
Sbjct:   270 SVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVN 329

Query:   319 LAFSAIEDRKVIGKVMIA 336
              AF  +  RK  GKV+++
Sbjct:   330 DAFLHVTQRKSTGKVLLS 347

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6QQF5	QORL2_BOVIN	1, ., -, ., -, ., -	0.3605	0.9020	0.8968	yes	no
B0BNC9	QORL2_RAT	1, ., -, ., -, ., -	0.3615	0.9481	0.94	yes	no
Q3UNZ8	QORL2_MOUSE	1, ., -, ., -, ., -	0.3636	0.9020	0.8942	yes	no
P38230	QOR_YEAST	1, ., 6, ., 5, ., 5	0.3166	0.8328	0.8652	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.48	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_1250138 SubName- Full=Putative uncharacterized protein; (353 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	347
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-149
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-75
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-65
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	7e-64
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-63
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-62
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	4e-58
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	5e-58
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	5e-57
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	3e-56
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	6e-56
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	4e-54
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-53
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-53
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-52
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	7e-51
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-50
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	8e-50
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-48
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-46
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-45
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	5e-45
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	5e-43
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	4e-42
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	6e-42
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	5e-41
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	7e-39
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-38
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	5e-38
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-37
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	5e-37
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-35
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-34
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	6e-34
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-32
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	6e-32
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-31
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	1e-30
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-29
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-27
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	3e-27
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	4e-27
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-27
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-26
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-25
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-24
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-24
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-24
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-23
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-23
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	2e-23
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	3e-22
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	9e-22
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	9e-22
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-21
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	3e-21
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	5e-21
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	6e-21
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	9e-21
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-20
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	5e-20
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	9e-20
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-19
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-19
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	2e-19
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	4e-19
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	4e-19
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	6e-19
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-18
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-18
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	6e-18
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	3e-17
cd05281	341	cd05281, TDH, Threonine dehydrogenase	4e-17
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-16
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-16
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	7e-16
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	1e-15
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	3e-14
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	5e-14
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-13
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-13
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	4e-13
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	5e-13
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	5e-13
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	8e-13
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	1e-12
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-12
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-12
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	5e-12
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	9e-12
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-11
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-11
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	3e-11
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	8e-11
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	5e-10
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	7e-10
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	6e-09
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	2e-08
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	2e-07
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	2e-07
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-07
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	8e-07
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	2e-06
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-06
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	9e-06
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	9e-06
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	4e-05
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	7e-05
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-04
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	5e-04
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	5e-04
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	6e-04
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-04
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	0.003

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  422 bits (1088), Expect = e-149
 Identities = 156/335 (46%), Positives = 212/335 (63%), Gaps = 13/335 (3%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+VC++LG P          +VL +  P P       VR+RV+A  +N+ + L I GK
Sbjct: 1   MKAVVCKELGGPED--------LVLEEVPPEPGAPGE--VRIRVEAAGVNFPDLLMIQGK 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           YQ KPPLPFVPGS+ +G V+AVG  V+ FKVGD V      G FA+ +V   + +FP+P 
Sbjct: 51  YQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPD 110

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           G     AAALPV +GT++ ALV RA+L  G+ +LVLGAAGGVG+AAVQ+ K  GA +IA 
Sbjct: 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAA 170

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           A   EK+   ++LG DHV+D  +  +   VK        +GVDV+YDPVGG + + SL+ 
Sbjct: 171 ASSEEKLALARALGADHVIDYRDPDLRERVKA---LTGGRGVDVVYDPVGGDVFEASLRS 227

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L WG ++LVIGFASGEIP IPAN+ L+KN +V G+YWG+Y    P +L  +L EL    A
Sbjct: 228 LAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLA 287

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           +G I  H+S  +   +A  A  A+ DRK  GKV++
Sbjct: 288 EGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  233 bits (597), Expect = 6e-75
 Identities = 122/341 (35%), Positives = 172/341 (50%), Gaps = 19/341 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V  + G P V         +     P P+      V VRVKA  +N  + L   G 
Sbjct: 1   MKAVVVEEFGGPEV---------LKVVEVPEPEP-GPGEVLVRVKAAGVNPIDVLVRQGL 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSELFP 117
                PLPF+PGS+ +G V AVG  V+ FKVGD V     +   G +A+++V     L P
Sbjct: 51  APPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVP 110

Query: 118 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 177
           +P G     AAALP+A  T+ +AL  RA L  G+ +LV GAAGGVG AA+Q+ K  GAT+
Sbjct: 111 LPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATV 170

Query: 178 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 237
           +AV   +EK++ LK LG DHV++   E  +  V+E       KGVDV+ D VGG     S
Sbjct: 171 VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGG---KGVDVVLDTVGGDTFAAS 227

Query: 238 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL 297
           L  L  G +++ IG  SG  P +P N+  +    +            P  L ++L EL  
Sbjct: 228 LAALAPGGRLVSIGALSG-GPPVPLNLLPLLGKRLTLRGVTLG-SRDPEALAEALAELFD 285

Query: 298 WAAKGLITIHISHTYSPSEANLAF-SAIEDRKVIGKVMIAF 337
             A G +   I   Y  +EA  A    + +R+  GKV++  
Sbjct: 286 LLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  209 bits (535), Expect = 1e-65
 Identities = 104/341 (30%), Positives = 150/341 (43%), Gaps = 38/341 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+   + G P V    +          P P+      V V+V A  +N  +     G 
Sbjct: 1   MKAVRIHEYGGPEVLELAD---------VPTPEPGPGE-VLVKVHAAGVNPVDLKIREGL 50

Query: 61  YQEKPP--LPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSEL 115
            +   P  LP +PG D +G V AVGP V+ FKVGD V G       G++A+++V    EL
Sbjct: 51  LKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADEL 110

Query: 116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
              P       AAALP+A  T+  AL     L +GQ +L+ GAAGGVG  AVQ+ K  GA
Sbjct: 111 ALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA 170

Query: 176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235
            +IA A  A    FL+SLG D V+D +          F +A    GVD + D VGG+   
Sbjct: 171 RVIATA-SAANADFLRSLGADEVIDYTKGD-------FERAAAPGGVDAVLDTVGGETLA 222

Query: 236 ESLKLLNWGAQIL-VIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRE 294
            SL L+  G +++ + G    E           +     G+  G   +       + L E
Sbjct: 223 RSLALVKPGGRLVSIAGPPPAE-----------QAAKRRGVRAGFVFVEPDG---EQLAE 268

Query: 295 LLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           L      G +   +   +   +A  A   +E     GKV++
Sbjct: 269 LAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  205 bits (524), Expect = 7e-64
 Identities = 112/335 (33%), Positives = 160/335 (47%), Gaps = 28/335 (8%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF--- 69
           + I +   P VL   E P P       V +RV A  +N A+ LQ  G Y   PP P    
Sbjct: 4   IVIKEPGGPEVLELGEVPKPAPGP-GEVLIRVAAAGVNRADLLQRQGLY---PPPPGASD 59

Query: 70  VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAA 129
           + G + +G V AVGP V+ +KVGD VC   A G +A+++V    +L PVP+G  L+ AAA
Sbjct: 60  ILGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAA 119

Query: 130 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189
           LP  F T+   L     L +G+ +L+ G A GVG AA+Q+ K  GA +IA A   EK++ 
Sbjct: 120 LPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA 179

Query: 190 LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 249
            ++LG D  ++   E     VKE    R   GVDV+ D VGG     +L+ L    ++++
Sbjct: 180 CRALGADVAINYRTEDFAEEVKEATGGR---GVDVILDMVGGDYLARNLRALAPDGRLVL 236

Query: 250 IGFASGEIPVIPANIALVKNWTVHGLYWGS--------YKIHRPHVLEDSLRELLL-WAA 300
           IG   G    +     L K  T+     GS         K      L  + RE +    A
Sbjct: 237 IGLLGGAKAELDLAPLLRKRLTLT----GSTLRSRSLEEKAA----LAAAFREHVWPLFA 288

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
            G I   I   +   EA  A   +E  + IGK+++
Sbjct: 289 SGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  205 bits (523), Expect = 1e-63
 Identities = 113/362 (31%), Positives = 165/362 (45%), Gaps = 49/362 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V R  G P V         +     P P+      V VRVKA +LN+ +     G 
Sbjct: 1   MKAVVIRGHGGPEV---------LEYGDLPEPEPGPD-EVLVRVKAAALNHLDLWVRRGM 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------------F 98
              K PLP + GSD +G V+AVGP V+N K G  V       CG               +
Sbjct: 51  PGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY 110

Query: 99  AALG-----SFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL 153
             LG      +A+++      L P+P       AAA P+ F T+   LV RA+L  G+ +
Sbjct: 111 GILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETV 170

Query: 154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213
           LV GA  GVG AA+QI K+ GAT+IA A   +K++  K LG D+V+D   E  +  V+E 
Sbjct: 171 LVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVREL 230

Query: 214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVH 273
              R   GVDV+ + VG    ++SLK L  G +++  G  +G    I       +  ++ 
Sbjct: 231 TGKR---GVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSIL 287

Query: 274 GLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV 333
           G   G+            L E L    +G +   I   +   EA  A   +E R+  GK+
Sbjct: 288 GSTMGTK---------AELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKI 338

Query: 334 MI 335
           ++
Sbjct: 339 VL 340

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  200 bits (510), Expect = 8e-62
 Identities = 102/340 (30%), Positives = 154/340 (45%), Gaps = 22/340 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   + G P V    +          P+P       V VRV A+ +N  +     G 
Sbjct: 1   MRAIRYHEFGAPDVLRLGDL---------PVPTPGP-GEVLVRVHASGVNPVDTYIRAGA 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAAL----GSFAQFIVADQSEL 115
           Y   PPLP+VPGSD +G V+AVG  V   KVGD V           G+ A+++V    +L
Sbjct: 51  YPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQL 110

Query: 116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
            P+P G      AAL +   T++ AL HRA   +G+ +LV G +G VG AAVQ+ +  GA
Sbjct: 111 VPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170

Query: 176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235
            +IA A  AE  + ++  G D V +   E +   +      +   GVDV+ + +      
Sbjct: 171 RVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQ---GVDVIIEVLANVNLA 227

Query: 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 295
           + L +L  G +I+V G        IP N  + K  ++ G+   +     P     +   +
Sbjct: 228 KDLDVLAPGGRIVVYGSGGLR-GTIPINPLMAKEASIRGVLLYT---ATPEERAAAAEAI 283

Query: 296 LLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
               A G +   I+  Y   EA  A  A+E    IGKV++
Sbjct: 284 AAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVL 323

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  190 bits (486), Expect = 4e-58
 Identities = 112/332 (33%), Positives = 163/332 (49%), Gaps = 32/332 (9%)

Query: 24  VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVG 83
           V  +  P P       VRVRV+A  LN+A+ +   G Y   P  PFVPG + +GTV+AVG
Sbjct: 16  VEKEALPEPSSGE---VRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVG 72

Query: 84  PNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH 143
             V +FKVGD V G    G +A+ +     ++FP+P G     AAA PV + T++ AL  
Sbjct: 73  EGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFE 132

Query: 144 RAQLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLS 202
              L  GQ +LV  AAGGVG+AA Q+ K V   T++  A  A K + LK  GV HV+D  
Sbjct: 133 LGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYR 191

Query: 203 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA---SGEIPV 259
            +  +  VK+       +GVD++ D +GG+ T++S  LL    +++V G A   +GE   
Sbjct: 192 TQDYVEEVKKIS----PEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRS 247

Query: 260 IPANIALVKNW----------------TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 303
                 L K W                +V G   G +      +L + + +LL    +G 
Sbjct: 248 W---FKLAKKWWNRPKVDPMKLISENKSVLGFNLG-WLFEERELLTEVMDKLLKLYEEGK 303

Query: 304 ITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           I   I   +   E   A   ++ RK IGKV++
Sbjct: 304 IKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVL 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  190 bits (485), Expect = 5e-58
 Identities = 105/324 (32%), Positives = 150/324 (46%), Gaps = 10/324 (3%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           V IH    P VL   + P+P+      V VR  A  +N+ +     G Y    PLPFV G
Sbjct: 3   VRIHKTGGPEVLEYEDVPVPEP-GPGEVLVRNTAIGVNFIDTYFRSGLY--PLPLPFVLG 59

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
            + +G V+AVGP V+ FKVGD V      G++A++ V   S L  +P G     AAAL +
Sbjct: 60  VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLL 119

Query: 133 AFGTSHVALVHRA-QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191
              T+H  L+     +  G  +LV  AAGGVG+   Q  K  GAT+I      EK +  +
Sbjct: 120 QGLTAH-YLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178

Query: 192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 251
           + G DHV++  +E  +  V+E    R   GVDV+YD VG    + SL  L     ++  G
Sbjct: 179 AAGADHVINYRDEDFVERVREITGGR---GVDVVYDGVGKDTFEGSLDSLRPRGTLVSFG 235

Query: 252 FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT 311
            ASG +P          +  +       Y I     L     EL    A G + + I   
Sbjct: 236 NASGPVPPFDLLRLSKGSLFLTRPSLFHY-IATREELLARAAELFDAVASGKLKVEIGKR 294

Query: 312 YSPSEANLAFSAIEDRKVIGKVMI 335
           Y  ++A  A   +E RK  GK+++
Sbjct: 295 YPLADAAQAHRDLESRKTTGKLLL 318

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  186 bits (475), Expect = 5e-57
 Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 19/303 (6%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V V VKA  LN+ + L  LG            G + SG V  VG  V+  KVGD V G A
Sbjct: 3   VEVEVKAAGLNFRDVLVALGLLPGDET---PLGLECSGIVTRVGSGVTGLKVGDRVMGLA 59

Query: 100 ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 159
             G+FA  +  D   +  +P       AA LPVA+ T++ ALV  A+L  G+ +L+  AA
Sbjct: 60  P-GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAA 118

Query: 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG--VDHVVDLSNESVIPS-VKEFLKA 216
           GGVG AA+Q+ +  GA + A     EK +FL+ LG  VDH+      S   S     L+A
Sbjct: 119 GGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFS----SRDLSFADGILRA 174

Query: 217 RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTV 272
              +GVDV+ + + G+L + S + L    + + IG     ++ ++ + P     ++N + 
Sbjct: 175 TGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP----FLRNVSF 230

Query: 273 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
             +        RP +L + LRE+L     G++          +    AF  ++  K IGK
Sbjct: 231 SSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGK 290

Query: 333 VMI 335
           V++
Sbjct: 291 VVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  185 bits (472), Expect = 3e-56
 Identities = 108/350 (30%), Positives = 156/350 (44%), Gaps = 37/350 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+ALV    G P V              E P PQ      V VRV A+ +N  +     G
Sbjct: 1   MKALVLESFGGPEV----------FELREVPRPQP-GPGQVLVRVHASGVNPLDTKIRRG 49

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSE 114
               +PPLP + G D +G V+AVG  V+ F+VGD V G A       GS A++ V D   
Sbjct: 50  GAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL 109

Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
           L   P    +  AAALP+   T+   LV RA + +GQ +L+ G AGGVG  AVQ+ K  G
Sbjct: 110 LALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAG 169

Query: 175 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
           A + A A   EK  F +SLG D ++          V+   +    +G DV++D VGG+  
Sbjct: 170 ARVYATASS-EKAAFARSLGADPIIYYRET----VVEYVAEHTGGRGFDVVFDTVGGETL 224

Query: 235 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG------LYWGSYKIHRPHVL 288
             S + +    +++ I        + P +    +N T  G      L  G  + H  H  
Sbjct: 225 DASFEAVALYGRVVSI-LGGATHDLAPLSF---RNATYSGVFTLLPLLTGEGRAH--HG- 277

Query: 289 EDSLRELLLWAAKGLITIHIS-HTYSPSEANLAFSAIEDRKVIGKVMIAF 337
            + LRE      +G +   +   T+   EA  A + +E     GK++I  
Sbjct: 278 -EILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  184 bits (470), Expect = 6e-56
 Identities = 102/324 (31%), Positives = 153/324 (47%), Gaps = 6/324 (1%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           + I +   P VL   E P+P   +   V +RV A  +N  + LQ  GKY   P    + G
Sbjct: 4   IEITEPGGPEVLVLVEVPLPVPKAGE-VLIRVAAAGVNRPDLLQRAGKYPPPPGASDILG 62

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
            + +G V AVG  VS +KVGD VC   A G +A+++     ++ PVP+G  L+ AAALP 
Sbjct: 63  LEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPE 122

Query: 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 192
            F T    L  R  L +G+ +L+ G A G+G  A+Q+ K  GA +   A   EK    ++
Sbjct: 123 TFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA 182

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 252
           LG D  ++   E  +  VK        KGVDV+ D VGG     ++K L    +I+ IGF
Sbjct: 183 LGADIAINYREEDFVEVVKAETGG---KGVDVILDIVGGSYLNRNIKALALDGRIVQIGF 239

Query: 253 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL-WAAKGLITIHISHT 311
             G    +     L K  T+ G    +  +     +   LRE +    A G +   I   
Sbjct: 240 QGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKV 299

Query: 312 YSPSEANLAFSAIEDRKVIGKVMI 335
           +   +A  A + +E    IGK+++
Sbjct: 300 FPLEDAAQAHALMESGDHIGKIVL 323

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  180 bits (458), Expect = 4e-54
 Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 8/241 (3%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V +RV+A  LN A+ +   G Y E PPLP   G + +G V+AVG  V+ F VGD V    
Sbjct: 30  VLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIP 89

Query: 100 AL-----GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 154
           A      G++A++ +   + +  +P G   + AAAL + + T++ ALV  A L  G  +L
Sbjct: 90  AADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVL 149

Query: 155 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFL 214
           +  A+  VG+AA+QI    GAT+IA  R +EK   L +LG  HV+    E +   V E L
Sbjct: 150 ITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDL---VAEVL 206

Query: 215 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 274
           +    KGVDV++DPVGG    +    L  G  ++V G  SGE    P   AL K+ T  G
Sbjct: 207 RITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRG 266

Query: 275 L 275
            
Sbjct: 267 Y 267

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  179 bits (456), Expect = 1e-53
 Identities = 102/332 (30%), Positives = 140/332 (42%), Gaps = 36/332 (10%)

Query: 28  TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS 87
            EP+P+      V VRV A SLNY + L + G+Y      P +P SD +G V AVG  V+
Sbjct: 19  EEPVPEPGPGE-VLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVT 77

Query: 88  NFKVGDTVC---------------------GFAALGSFAQFIVADQSELFPVPKGCDLLA 126
            FKVGD V                      G    G  A+++V  +  L   P       
Sbjct: 78  RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEE 137

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
           AA LP A  T+  AL     L  G  +LV G  GGV + A+Q  K  GA +IA +   EK
Sbjct: 138 AATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEK 196

Query: 187 IKFLKSLGVDHVVDLSNESVIPS-VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA 245
           ++  K+LG DHV+   N    P   +E LK    +GVD + +  G     +S+K +  G 
Sbjct: 197 LERAKALGADHVI---NYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGG 253

Query: 246 QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 305
            I +IGF SG    +     L K  T+ G+  GS               +        I 
Sbjct: 254 VISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSR---------AQFEAMNRAIEAHRIR 304

Query: 306 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
             I   +   EA  A+  +E     GKV+I  
Sbjct: 305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  176 bits (449), Expect = 3e-53
 Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 25/303 (8%)

Query: 42  VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL 101
           + V+A  LN+ + L  LG Y  +  L    G + +G V  VGP V+   VGD V G A  
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPGEAVL----GGECAGVVTRVGPGVTGLAVGDRVMGLAP- 55

Query: 102 GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 161
           G+FA  +V D   + P+P G     AA +PV F T++ ALV  A+L  G+ +L+  AAGG
Sbjct: 56  GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGG 115

Query: 162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVVDLSNESVIPSVKEFLKARKL 219
           VG AA+Q+ +  GA + A A   EK  FL++LG+  DH+    + S      E L+A   
Sbjct: 116 VGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSF---ADEILRATGG 172

Query: 220 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTVHG- 274
           +GVDV+ + + G+    SL+ L  G + + IG      + ++ + P       N + H  
Sbjct: 173 RGVDVVLNSLSGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLAMAPFR----PNVSYHAV 228

Query: 275 -LYWGSYKIHRPHVLEDSLRELL-LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
            L         P  + + L E+L L+A   L  + +   +  S+A  AF  ++  K IGK
Sbjct: 229 DL---DALEEGPDRIRELLAEVLELFAEGVLRPLPV-TVFPISDAEDAFRYMQQGKHIGK 284

Query: 333 VMI 335
           V++
Sbjct: 285 VVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  174 bits (444), Expect = 1e-52
 Identities = 93/266 (34%), Positives = 126/266 (47%), Gaps = 29/266 (10%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V VRV+A  L   +     G Y   P LP + G + +G V  VGP V+  KVGD V    
Sbjct: 2   VLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLP 61

Query: 97  --------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT 136
                               G    G FA+++V     L P+P G  L  AA LP    T
Sbjct: 62  NLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLAT 121

Query: 137 SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD 196
           ++ AL     L  G  +LVLG AGGVG+ A Q+ K  GA +I   R  EK++  K LG D
Sbjct: 122 AYHALRRAGVLKPGDTVLVLG-AGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGAD 180

Query: 197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASG 255
           HV+D   E     ++E L+     G DV+ D VGG  T  ++L+LL  G +I+V+G  SG
Sbjct: 181 HVIDYKEE----DLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG 236

Query: 256 EIPVIPANIALVKNWTVHGLYWGSYK 281
             P+      L K  T+ G   G+ +
Sbjct: 237 GPPLDDLRRLLFKELTIIGSTGGTRE 262

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  171 bits (436), Expect = 7e-51
 Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 6/320 (1%)

Query: 19  EKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT 78
           E  P+VL              V VR+ A  +N ++ + I G Y  +PPLP VPG++  G 
Sbjct: 8   EPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGV 67

Query: 79  VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSH 138
           V  VG  VS   VG  V      G++ +++VA   +L PVP       AA L +   T+ 
Sbjct: 68  VVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAW 127

Query: 139 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 198
           + L    +L  G  ++   A   VG   +Q+ K+ G   I V R  E+++ LK+LG D V
Sbjct: 128 LMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEV 187

Query: 199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
           +D S E +   VKE   A    G  +  D VGG+      + L  G  ++  G  SGE  
Sbjct: 188 IDSSPEDLAQRVKE---ATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPV 244

Query: 259 VIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316
             P ++ + K+ TV G +W    +H       +++  E++     G++T  +   +   +
Sbjct: 245 PFPRSVFIFKDITVRG-FWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLED 303

Query: 317 ANLAFSAIEDRKVIGKVMIA 336
              A +A E     GKV++ 
Sbjct: 304 FEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  170 bits (433), Expect = 1e-50
 Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 8/299 (2%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           VR++V+A SLN+ + L + G Y   PP PF PG + SG V AVGP+V+   VGD V    
Sbjct: 10  VRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT 69

Query: 100 A--LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 157
              +G  A  +   + ++   P       A ALPV F T   A   RA L+ G+ +L+  
Sbjct: 70  GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQT 128

Query: 158 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR 217
           A GG G+ AVQ+ ++ GA I A A   +K+++LK LGV HV++   E     +      R
Sbjct: 129 ATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGR 188

Query: 218 KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF-ASGEIPVIPANIALVKNWTVHGLY 276
              GVDV+ + + G+  ++ L  L  G + + I   A    P +  ++ L  N + H + 
Sbjct: 189 ---GVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVD 244

Query: 277 WGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
                +  P  + D   E++    +G +   +S  +   +   A+  + DR+ IGKV++
Sbjct: 245 LRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  169 bits (430), Expect = 8e-50
 Identities = 111/371 (29%), Positives = 168/371 (45%), Gaps = 64/371 (17%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V +K G P           +     P P       V ++V+A  + + +     G 
Sbjct: 4   MKAAVLKKFGQP---------LEIEEVPVPEPGPGE---VLIKVEACGVCHTDLHVAKGD 51

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--------------C---------- 96
           +   P LP +PG +  GTV  VG  V+  KVGD V              C          
Sbjct: 52  WPV-PKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN 110

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G+   G +A+++V     +  +P+G DL  AA L  A  T++ AL   A +  G+ 
Sbjct: 111 QKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKW 169

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           + V+GA GG+G  AVQ  K  GA +IA+ R  EK++  K LG DHV++ S+   + +VKE
Sbjct: 170 VAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE 228

Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG-FASGEIPVIPANIALVKNWT 271
                     D + D VG    + SLK L  G  ++++G    G IP++PA + ++K  +
Sbjct: 229 --------IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEIS 280

Query: 272 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 331
           + G   G+            L E L +AA+G I   I  T    E N A+  +E  KV G
Sbjct: 281 IVGSLVGTRA---------DLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRG 331

Query: 332 KVMIAFDDMKS 342
           + +I   DM S
Sbjct: 332 RAVI---DMSS 339

Length = 339

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  164 bits (418), Expect = 3e-48
 Identities = 101/347 (29%), Positives = 154/347 (44%), Gaps = 45/347 (12%)

Query: 5   VCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK 64
           V  + G P V        ++L    PIP       V V+V A S+N  ++     K +  
Sbjct: 2   VYTRYGSPEV-------LLLLEVEVPIPTP-KPGEVLVKVHAASVNPVDW-----KLRRG 48

Query: 65  PPL-------PFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSE 114
           PP        P +PG D++G V AVG  V+ FKVGD V G       G+ A+++VA +S 
Sbjct: 49  PPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESG 108

Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
           L   P+G     AAALPVA  T+  AL    ++  GQ +L+ GA+GGVG  AVQI K  G
Sbjct: 109 LAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALG 168

Query: 175 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG--- 231
           A +  V       + ++SLG D V+D + E  +            +  DV++D VG    
Sbjct: 169 AHVTGVCSTR-NAELVRSLGADEVIDYTTEDFVA------LTAGGEKYDVIFDAVGNSPF 221

Query: 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
            L + SL L   G  + V G           +  L+    +     G  +  +  + + +
Sbjct: 222 SLYRASLALKPGGRYVSVGG---------GPSGLLLVLLLLPLTLGGGGRRLKFFLAKPN 272

Query: 292 ---LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
              L +L     +G +   I   Y   +A  A+  ++  +  GKV+I
Sbjct: 273 AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  160 bits (406), Expect = 2e-46
 Identities = 95/314 (30%), Positives = 145/314 (46%), Gaps = 31/314 (9%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V V+V+A+ +++A+     G Y ++PPLPF PG D  G VDA+G  V+ F+VGD V    
Sbjct: 30  VVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT 89

Query: 100 ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV----AFGTSHVALVHRAQLSSGQVLLV 155
            +G  A++I  D   L PVP+G D   A  L +    A+   H A    A++ +GQ +L+
Sbjct: 90  RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRA----AKVLTGQRVLI 145

Query: 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 215
            GA+GGVG A +++  + GA +   A        L+ LG    +D   +  +P++     
Sbjct: 146 HGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPAMLT--- 200

Query: 216 ARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-------PVIPANIALVK 268
                GVDV++D VGG+  +ES   L  G  ++  G  S  +        +      L K
Sbjct: 201 ---PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAK 257

Query: 269 NW-------TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF 321
                          W           +D L ELL   AKG I   I+     SE   A 
Sbjct: 258 LKLLPTGRRATFYYVWRDRAEDPKLFRQD-LTELLDLLAKGKIRPKIAKRLPLSEVAEAH 316

Query: 322 SAIEDRKVIGKVMI 335
             +E  KV+GK+++
Sbjct: 317 RLLESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  156 bits (397), Expect = 5e-45
 Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 51/335 (15%)

Query: 29  EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTVDAVGPNVS 87
           +P P       V ++VKA  + Y + L   G +   K PL  + G +  GTV+ VG  V 
Sbjct: 20  DPEPGPGE---VLIKVKAAGVCYRDLLFWKGFFPRGKYPL--ILGHEIVGTVEEVGEGVE 74

Query: 88  NFKVGDTV---------------------C------GFAALGSFAQFIVADQSELFPVPK 120
            FK GD V                     C      G    G FA+++   +  L  +P 
Sbjct: 75  RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPD 134

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
                +AA      GT+  AL  RA +  G  +LV GA GGVG+ A+Q+ K  GA +IAV
Sbjct: 135 NVSDESAALAACVVGTAVHAL-KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAV 193

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
            R  EK+K LK LG D+V+D S  S           +KL G DV+ + VG    +ESL+ 
Sbjct: 194 TRSPEKLKILKELGADYVIDGSKFSE--------DVKKLGGADVVIELVGSPTIEESLRS 245

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           LN G ++++IG  + +   +   + ++K   + G               D + E L    
Sbjct: 246 LNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIG--------SISATKAD-VEEALKLVK 296

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           +G I   I    S  + N A   ++  KV+G++++
Sbjct: 297 EGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  156 bits (398), Expect = 5e-45
 Identities = 97/367 (26%), Positives = 146/367 (39%), Gaps = 50/367 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN---------Y 51
           M+A      G            ++L +   IP +     V ++V A S+N         Y
Sbjct: 1   MKAWQIHSYGGIDS--------LLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGY 52

Query: 52  ANYL-----QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GS 103
              L     +           P   G D SG V  +G  V +F++GD V G       G+
Sbjct: 53  GRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGT 112

Query: 104 FAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL----SSGQVLLVLGAA 159
            A+++V  ++E+   PK      AA+LP A  T+  ALV+   L    ++G+ +L+LG +
Sbjct: 113 HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGS 172

Query: 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
           GGVG  A+Q+ K  GA +       + I  +KSLG D V+D +NE          +  + 
Sbjct: 173 GGVGTFAIQLLKAWGAHVTTTCS-TDAIPLVKSLGADDVIDYNNEDFE------EELTER 225

Query: 220 KGVDVLYDPVGGKLTKESLKLLNWGAQILVI-----------GFASGEIPVIPANIALVK 268
              DV+ D VGG   K +LKLL  G   + +           G   G   +  A   L K
Sbjct: 226 GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGM--LKSAVDLLKK 283

Query: 269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 328
           N     L    Y+         +L EL      G I   I   +   E   A+  +E   
Sbjct: 284 NV-KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGH 342

Query: 329 VIGKVMI 335
             GK +I
Sbjct: 343 ARGKTVI 349

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  151 bits (383), Expect = 5e-43
 Identities = 80/224 (35%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
            IP    +  V V+V A  LN  ++  I          P VPG D +G V AVG  V+ +
Sbjct: 21  EIPGP-GAGEVLVKVHAAGLNPVDWKVIAWGPPAWSY-PHVPGVDGAGVVVAVGAKVTGW 78

Query: 90  KVGDTVCGFAAL---GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ 146
           KVGD V   A+L   GSFA++ V D   + P+P       AAALP A  T++ AL  + +
Sbjct: 79  KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLR 138

Query: 147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206
           + +G+ +L+ G AGGVG  AVQ+ K  G  +I         +++KSLG DHV+D ++E V
Sbjct: 139 IEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKR-NFEYVKSLGADHVIDYNDEDV 197

Query: 207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVI 250
              +KE    R   GVD + D VGG+        L +   ++ I
Sbjct: 198 CERIKEITGGR---GVDAVLDTVGGETAAALAPTLAFNGHLVCI 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  149 bits (377), Expect = 4e-42
 Identities = 96/359 (26%), Positives = 146/359 (40%), Gaps = 44/359 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+  +  G   V               P P       V ++V A  +N A+ LQ  GK
Sbjct: 2   MRAVTLKGFGGVDVLK---------IGESPKPAPKR-NDVLIKVSAAGVNRADTLQRQGK 51

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           Y   P    + G + +G V+ VG +V  FK GD V      G +A++ VA +  +  +P+
Sbjct: 52  YPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQ 111

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           G     AAA+P AF T+   L     +  GQ +L+   A GVG AA Q+ +  GA  I  
Sbjct: 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIIT 171

Query: 181 ARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
               EK+ F K L    ++     E   P VK+       KGV+++ D VGG    E+ +
Sbjct: 172 TSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGE---KGVNLVLDCVGGSYLSETAE 228

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR------ 293
           +L    + +V GF  G                V           R  ++  +LR      
Sbjct: 229 VLAVDGKWIVYGFMGGA--------------KVEKFNLLPLLRKRASIIFSTLRSRSDEY 274

Query: 294 ----------ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKS 342
                     E+L +  +G I   +  TY   E   A + +E  K IGKV++  ++  S
Sbjct: 275 KADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPLS 333

Length = 334

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  148 bits (375), Expect = 6e-42
 Identities = 113/339 (33%), Positives = 163/339 (48%), Gaps = 21/339 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL--QIL 58
           M A+   + G P V +  E  P      +P+P       VR+ V A  +++ +       
Sbjct: 1   MRAIRLHEFGPPEV-LVPEDVP------DPVPGPGQ---VRIAVAAAGVHFVDTQLRSGW 50

Query: 59  GKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL--GSFAQFIVADQSELF 116
           G     P LP+VPG + +G VDAVGP V    +G  V        G +A+  VAD   L 
Sbjct: 51  GPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLH 110

Query: 117 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT 176
           PVP G DL AA A+ V  G + + L+  A L+ G V+LV  AAGG+G   VQ+ K  GAT
Sbjct: 111 PVPDGLDLEAAVAV-VHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT 169

Query: 177 IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE 236
           ++  A G  K   +++LG D  VD +       V+E L      GV V+ D VGG + + 
Sbjct: 170 VVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGG---GVTVVLDGVGGAIGRA 226

Query: 237 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL 296
           +L LL  G + L  G+ASGE   +  + A  +  TV GL     +  R  +     R L 
Sbjct: 227 ALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGL--LGVQAERGGLRALEARALA 284

Query: 297 LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             AA G +   +  T+    A  A +A+E R  +GKV++
Sbjct: 285 E-AAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLL 322

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  146 bits (370), Expect = 5e-41
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 29/244 (11%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY 75
           +      +++    P+P+      V V+VKA +LN  ++      Y   P  P + G D+
Sbjct: 6   LTGPGGGLLVVVDVPVPKPGPDE-VLVKVKAVALNPVDWKHQ--DYGFIPSYPAILGCDF 62

Query: 76  SGTVDAVGPNVSNFKVGDTVCGFA--------ALGSFAQFIVADQSELFPVPKGCDLLAA 127
           +GTV  VG  V+ FKVGD V GF           G+F +++VAD      +P       A
Sbjct: 63  AGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEA 122

Query: 128 AALPVAFGTSHVALVHRAQL----------SSGQVLLVLGAAGGVGVAAVQIGKVCGATI 177
           A LPV   T+ +AL  +  L          S G+ +L+ G +  VG  A+Q+ K+ G  +
Sbjct: 123 ATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKV 182

Query: 178 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 237
           I  A   +    +KSLG D V D  +    P V E ++A     +    D +    T ES
Sbjct: 183 ITTA-SPKNFDLVKSLGADAVFDYHD----PDVVEDIRAATGGKLRYALDCIS---TPES 234

Query: 238 LKLL 241
            +L 
Sbjct: 235 AQLC 238

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 7e-39
 Identities = 93/347 (26%), Positives = 149/347 (42%), Gaps = 50/347 (14%)

Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K    + +    P+      V ++V    L Y + LQ+ G Y  +   P + G +  GTV
Sbjct: 10  KQGYRIEEVP-DPKPGKDEVV-IKVNYAGLCYRDLLQLQGFYP-RMKYPVILGHEVVGTV 66

Query: 80  DAVGPNVSNFKVGDTV-------------C--GFAAL------------GSFAQFIVADQ 112
           + VG NV  FK GD V             C  G  A             G FA++     
Sbjct: 67  EEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKV 126

Query: 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 172
           + L  VP       A  +P   G  +  L  RA +  G+ +LV GA GGVG+ A+Q+ K 
Sbjct: 127 TSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRAGVKKGETVLVTGAGGGVGIHAIQVAKA 185

Query: 173 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232
            GA +IAV     K K +     D+V+  S  S     +E    +K+ G D++ + VG  
Sbjct: 186 LGAKVIAVTSSESKAKIVSKYA-DYVIVGSKFS-----EE---VKKIGGADIVIETVGTP 236

Query: 233 LTKESLKLLNWGAQILVIG-FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
             +ESL+ LN G +I+ IG         +     ++K+  + G    + +      +E++
Sbjct: 237 TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRD-----VEEA 291

Query: 292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338
           L+ +    A+G I   I    S SE + A   ++D+  IGK+++   
Sbjct: 292 LKLV----AEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKPS 334

Length = 334

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  138 bits (350), Expect = 4e-38
 Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 47/300 (15%)

Query: 62  QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------------- 97
                LPF  G + +G V+ VG  V   K GD V       CG                 
Sbjct: 52  ILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENAR 111

Query: 98  FAAL---GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV-HRAQLSSGQVL 153
           F  +   G FA++++     L  +P+G D + AA L  A  T++ A+      L  G  +
Sbjct: 112 FPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTV 171

Query: 154 LVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           +V+G  GG+G  AVQI +    AT+IAV R  E +K  + LG DHV++    +    V+E
Sbjct: 172 VVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN----ASDDVVEE 226

Query: 213 FLKARKLKGVDVLYDPVGGKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 271
             +    +G D + D VG   T   + KLL  G + +++G+  G    +P +  +    +
Sbjct: 227 VRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYG-GHGR-LPTSDLVPTEIS 284

Query: 272 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 331
           V G  WG+            L E++  A  G + + I+  +   +AN A   + + +V G
Sbjct: 285 VIGSLWGTRA---------ELVEVVALAESGKVKVEIT-KFPLEDANEALDRLREGRVTG 334

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score =  137 bits (348), Expect = 5e-38
 Identities = 102/340 (30%), Positives = 142/340 (41%), Gaps = 20/340 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A V  + GDP           VL   E P P   +   V VR   + ++  +   I G
Sbjct: 1   MRAAVHTQFGDPAD---------VLEIGEVPKPTPGAGE-VLVRTTLSPIHNHDLWTIRG 50

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
            Y  KP LP + GS+  G VDAVG  V   +VG  V      G++A++ VA    L P+P
Sbjct: 51  TYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLP 110

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
            G     AA L +A   S + L+    +  GQ L+   A G VG     +    G  +I 
Sbjct: 111 DGISDEVAAQL-IAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVIN 169

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           + R    +  L++LG+  VV          V+E      +    V  D VGGKL  E L 
Sbjct: 170 LVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPIS---VALDSVGGKLAGELLS 226

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR---ELL 296
           LL  G  ++  G  SGE   I +   + K  TV G  WG        V E   R   ELL
Sbjct: 227 LLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGF-WGGRWSQEMSV-EYRKRMIAELL 284

Query: 297 LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336
             A KG + + +   +   +A  A +A       GKV++ 
Sbjct: 285 TLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  136 bits (344), Expect = 3e-37
 Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 52/365 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V  + G+    + D           P+P+      V V+++A+ + + +    LG 
Sbjct: 1   MKAAVVEEFGEKPYEVKDV----------PVPE-PGPGEVLVKLEASGVCHTDLHAALGD 49

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC-- 96
           +  KP LP + G + +G V AVGP VS  KVGD                      T+C  
Sbjct: 50  WPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN 109

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G+   G+FA++ +AD   + P+P G     AA L  A  T + AL  +A L  G  
Sbjct: 110 QKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK-KAGLKPGDW 168

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           +++ GA GG+G   VQ  K  G  +IA+  G EK++  K LG D  VD      + +VKE
Sbjct: 169 VVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKE 228

Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
                    V V    V     +++L  L  G  ++ +G   G    +     +++  T+
Sbjct: 229 LTGGGGAHAVVVT--AVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITI 286

Query: 273 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
            G   G+         +D L+E L +AA+G +  HI       + N  F  +E+ K+ G+
Sbjct: 287 VGSLVGT--------RQD-LQEALEFAARGKVKPHIQ-VVPLEDLNEVFEKMEEGKIAGR 336

Query: 333 VMIAF 337
           V++ F
Sbjct: 337 VVVDF 341

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  135 bits (342), Expect = 5e-37
 Identities = 84/263 (31%), Positives = 125/263 (47%), Gaps = 31/263 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVK-----ATSLNYANY 54
              LV  +L        + +    +     P+P       V V+ +     A+ +N+   
Sbjct: 2   FRKLVVHRLS------PNFREATSIVDVPVPLP---GPGEVLVKNRFVGINASDINFTA- 51

Query: 55  LQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSE 114
               G+Y      PF  G +  G V AVG  V++FKVGD V    + G+FA++ V     
Sbjct: 52  ----GRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAV-ATMSFGAFAEYQVVPARH 106

Query: 115 LFPVPKGCDLLAAAALP--VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 172
             PVP+    L    LP  V+  T+ +AL    ++ SG+ +LV  AAGG G  AVQ+ K+
Sbjct: 107 AVPVPE----LKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKL 162

Query: 173 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232
            G  +I      EK +FLKSLG D  ++   E     + E LK    KGVDV+Y+ VGG+
Sbjct: 163 AGCHVIGTCSSDEKAEFLKSLGCDRPINYKTE----DLGEVLKKEYPKGVDVVYESVGGE 218

Query: 233 LTKESLKLLNWGAQILVIGFASG 255
           +    +  L    +++VIGF SG
Sbjct: 219 MFDTCVDNLALKGRLIVIGFISG 241

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  131 bits (333), Expect = 1e-35
 Identities = 98/352 (27%), Positives = 147/352 (41%), Gaps = 26/352 (7%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            +ALV  + G+P           VL  ++  IP       V V++ A  +N A+  QI G
Sbjct: 1   AKALVYTEHGEP---------KEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQG 51

Query: 60  KYQEKPP----LPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSE 114
            Y  KPP     P V G++  G V  VG  V + K GD V      LG++    V    +
Sbjct: 52  VYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD 111

Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
           L  VP   D   AA L V   T++  L    +L  G  ++  GA   VG A +Q+ K+ G
Sbjct: 112 LIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLG 171

Query: 175 ATIIAVARGAEKI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
              I V R    +    + LK+LG DHV+    E       E LK+       +  + VG
Sbjct: 172 IKTINVVRDRPDLEELKERLKALGADHVLT-EEELRSLLATELLKSAPGGRPKLALNCVG 230

Query: 231 GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS--YKIHRPHVL 288
           GK   E  +LL+ G  ++  G  SG+   +P ++ + K+ T+ G +W +   K   P   
Sbjct: 231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRG-FWLTRWLKRANPEEK 289

Query: 289 EDSLRELLLWAAKGLI---TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
           ED L EL     +G +    +         E   A +        GK ++  
Sbjct: 290 EDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  128 bits (324), Expect = 2e-34
 Identities = 87/282 (30%), Positives = 129/282 (45%), Gaps = 52/282 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+ALV  K G   + + D K P                 V +RVK   +N  +Y  I   
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPG-----------EVLIRVKMAGVNPVDYNVI-NA 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---------------------C--- 96
            + KP +P +PG++++G V+ VG +V   K GD V                     C   
Sbjct: 49  VKVKP-MPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNG 107

Query: 97  ---GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL 153
              G  + G +A++IV  +  LF +P       AA+LPVA  T++ AL   A L  G+ +
Sbjct: 108 GIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-KTAGLGPGETV 166

Query: 154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213
           +V GA+G  G+ AVQ+ K+ GA +IAV+R      +LK  G D VVD     V   VKE 
Sbjct: 167 VVFGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLKEFGADEVVDYDE--VEEKVKEI 220

Query: 214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
            K       DV+ + +G      SL +L  G +++  G  +G
Sbjct: 221 TKM-----ADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG 257

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  127 bits (321), Expect = 6e-34
 Identities = 96/351 (27%), Positives = 149/351 (42%), Gaps = 55/351 (15%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKA-----TSLNYANYLQILGKYQEKPPLPFV 70
            H     +++ +  P+P+      V V+VKA     + L+      + G       LP  
Sbjct: 6   FHKGSKGLLVLEEVPVPEP-GPGEVLVKVKAAGVCHSDLHI-----LDGGVPTLTKLPLT 59

Query: 71  PGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---------------------------GS 103
            G + +GTV  VG  V+NFKVGD V   A +                           G 
Sbjct: 60  LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119

Query: 104 FAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVG 163
           FA++IV     L PVP G     AA    A  T + A+V   ++  G+ +LV+G  GG+G
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLG 178

Query: 164 VAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 223
           + AVQI K  GA +IAV    EK++  K LG D V++  ++S        L      G D
Sbjct: 179 LNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLG----GGFD 234

Query: 224 VLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI 282
           V++D VG + T E   K +  G +I+V+G    ++  +  +  + +   + G + G+   
Sbjct: 235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLT-VDLSDLIARELRIIGSFGGTP-- 291

Query: 283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV 333
                  + L E+L   AKG +      T    E       +   KV G+V
Sbjct: 292 -------EDLPEVLDLIAKGKLDP-QVETRPLDEIPEVLERLHKGKVKGRV 334

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  123 bits (310), Expect = 2e-32
 Identities = 82/325 (25%), Positives = 130/325 (40%), Gaps = 50/325 (15%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V ++++A  + + +     G +      P VPG +  G V  VG  V   KVGD V    
Sbjct: 27  VLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGW 85

Query: 96  ------------------------CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131
                                    G+   G +A+++VAD      +P G  L  AA L 
Sbjct: 86  LVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLL 145

Query: 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191
            A  T + AL   A    G+ + VLG  GG+G  AVQ  +  G   +A+ R  +K +  +
Sbjct: 146 CAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR 203

Query: 192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV-GGKLTKESLKLLNWGAQILVI 250
            LG D VVD        S  E  +     G DV+   V  G   + +L  L  G +I+++
Sbjct: 204 KLGADEVVD--------SGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLV 255

Query: 251 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 310
           G              ++K  ++ G   G             L+E L +AA+G +   I  
Sbjct: 256 GLPESPPFSPDIFPLIMKRQSIAGSTHGGRA---------DLQEALDFAAEGKVKPMI-E 305

Query: 311 TYSPSEANLAFSAIEDRKVIGKVMI 335
           T+   +AN A+  +E   V  + ++
Sbjct: 306 TFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  122 bits (308), Expect = 6e-32
 Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 38/243 (15%)

Query: 65  PPLPFVPGSDYSGTVDAVGPNVSNFKVGD---------------------TVC------G 97
             LP VPG +++G V  VG +VS ++VGD                      VC      G
Sbjct: 52  VTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG 111

Query: 98  FAALGSFAQFIVADQSE--LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155
           F   GSFA+++   +++  L  +P   D + AA L   F T+  ALVH+A++  G+ + V
Sbjct: 112 FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAV 171

Query: 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFL 214
            G  GGVG++AV I    GA +IAV    +K++  + LG    V+ S  E V  +V++  
Sbjct: 172 HG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLT 230

Query: 215 KARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGE--IPVIPANIALVKNWT 271
                 G  V  D +G   T + S+  L    + + +G   GE     +P +  + +   
Sbjct: 231 G----GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELE 286

Query: 272 VHG 274
           + G
Sbjct: 287 IVG 289

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  120 bits (304), Expect = 3e-31
 Identities = 100/354 (28%), Positives = 154/354 (43%), Gaps = 73/354 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN---FKVGDTV- 95
           + +RV A  + +++ L +L K +   P PFV G + SG V  VGPNV N     VGD V 
Sbjct: 28  ILIRVAACGVCHSD-LHVL-KGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVV 85

Query: 96  ------CG---------------FAA---------------------------LGSFAQF 107
                 CG               F A                           +G  A++
Sbjct: 86  GSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEY 145

Query: 108 IVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV 167
            V   + L P+P+  D   +A L  A  T++ AL H A +  G+ + V+G  GGVG +A+
Sbjct: 146 AVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAI 204

Query: 168 QIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226
           Q+ K  GA  IIAV    EK+   K LG  H V+ + E  + +++E    R   GVDV+ 
Sbjct: 205 QLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGR---GVDVVV 261

Query: 227 DPVGGKLT-KESLKLLNWGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGSYKIH 283
           + +G   T K +L ++  G + +V+G A G      IP    + +   + G Y       
Sbjct: 262 EALGKPETFKLALDVVRDGGRAVVVGLAPGGATAE-IPITRLVRRGIKIIGSYGA----- 315

Query: 284 RPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           RP      L EL+  AA G +     ++H Y   E N A+  +    + G+ ++
Sbjct: 316 RPRQ---DLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIV 366

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  118 bits (298), Expect = 1e-30
 Identities = 81/287 (28%), Positives = 135/287 (47%), Gaps = 35/287 (12%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTVC--------------GFAALGS-----FAQFI 108
           P + G+D  G V AVG  V   ++G+ V                   +GS     FA++ 
Sbjct: 78  PRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYT 137

Query: 109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 168
           V      +PV      +  A  P ++ T+   L  RA + +G+ +LV GA+GGVG A VQ
Sbjct: 138 VVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQ 196

Query: 169 IGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228
           + K  GA +IAVA GA K + +++LG D V+      +  +     KA   + VDV+ D 
Sbjct: 197 LAKRRGAIVIAVA-GAAKEEAVRALGADTVILRDAPLLADA-----KALGGEPVDVVADV 250

Query: 229 VGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 288
           VGG L  + L+LL  G + +  G  +G +  +      +K+ T+ G   G+       V 
Sbjct: 251 VGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT-----REV- 304

Query: 289 EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
               R L+ +  +G I   ++ T+  SE   A +   +++ +GK+++
Sbjct: 305 ---FRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  115 bits (290), Expect = 1e-29
 Identities = 77/259 (29%), Positives = 115/259 (44%), Gaps = 21/259 (8%)

Query: 87  SNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFG----TSHVALV 142
            +FKVGD V GF     +A  +V   S L  +     L  +A L V  G    T++  L 
Sbjct: 82  PDFKVGDLVSGFLGWQEYA--VVDGASGLRKLDPSLGLPLSAYLGV-LGMTGLTAYFGLT 138

Query: 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDL 201
              +   G+ ++V  AAG VG    QI K+ GA ++ +A   EK ++L   LG D  ++ 
Sbjct: 139 EIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINY 198

Query: 202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG---EIP 258
                 P + E LK     G+DV +D VGG++   +L LLN G +I + G  S      P
Sbjct: 199 KT----PDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEP 254

Query: 259 VIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316
             P N+   + K  T+ G     Y    P    ++L EL  W A+G +            
Sbjct: 255 PGPKNLGNIITKRLTMQGFIVSDYADRFP----EALAELAKWLAEGKLKYREDVVEGLEN 310

Query: 317 ANLAFSAIEDRKVIGKVMI 335
           A  AF  +   K  GK+++
Sbjct: 311 APEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  109 bits (275), Expect = 2e-27
 Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 15/191 (7%)

Query: 42  VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--CG-F 98
           VRV+A S+N  +  ++       P  P + G D SG V+AVG  V+ FKVGD V   G  
Sbjct: 35  VRVEAVSVNPVDT-KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI 93

Query: 99  AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQVL 153
              GS A++ + D+  +   PK      AAALP+   T+  AL  R  +S      G+ L
Sbjct: 94  TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTL 153

Query: 154 LVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           L++G AGGVG  A+Q+ K + G T+IA A   E I ++K LG DHV++         + E
Sbjct: 154 LIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-----DLAE 208

Query: 213 FLKARKLKGVD 223
            L+A  ++ VD
Sbjct: 209 QLEALGIEPVD 219

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  108 bits (272), Expect = 3e-27
 Identities = 94/306 (30%), Positives = 137/306 (44%), Gaps = 26/306 (8%)

Query: 29  EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN 88
           +P P  + +    VRV A SLN       L    E+P    VPG D +G V+    + S 
Sbjct: 21  DPQPAPHEAL---VRVAAISLNRGE----LKFAAERPD-GAVPGWDAAGVVERAAADGSG 72

Query: 89  FKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
             VG  V G  A+G++A+ +      L  +P G     AA LPVA G + +  + R    
Sbjct: 73  PAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVA-GVTALRALRRGGPL 131

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVI 207
            G+ +LV GA+GGVG  AVQ+  + GA ++AV     + + L+ LG   VV   S  S  
Sbjct: 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGA 191

Query: 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALV 267
           P             VD++ D VGG     +L+LL  G  ++ +G +SGE  V     A V
Sbjct: 192 P-------------VDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPA-AFV 237

Query: 268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR 327
                  LY  ++ ++    L   L  LL   A G +   I    S +E + A  A+  R
Sbjct: 238 GGGGGRRLY--TFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLAR 295

Query: 328 KVIGKV 333
           +  GK 
Sbjct: 296 RFRGKA 301

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  108 bits (273), Expect = 4e-27
 Identities = 75/251 (29%), Positives = 108/251 (43%), Gaps = 25/251 (9%)

Query: 68  PFVPGSDYSGTVDAVG--PNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPV-PKGCDL 124
           P   G    G   A     N   F+ GD V G   +  + ++ ++D   L  + P    L
Sbjct: 68  PVELGEVMVGGTVAKVVASNHPGFQPGDIVVG---VSGWQEYAISDGEGLRKLDPSPAPL 124

Query: 125 LAAAALPVAFGTS---HVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA 181
             +A L V        +  L+   Q  +G+ ++V  AAG VG    QI K+ G  ++ +A
Sbjct: 125 --SAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIA 182

Query: 182 RGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
            GAEK  FL   LG D  +D   E       + LK    KG+DV ++ VGG++    L L
Sbjct: 183 GGAEKCDFLTEELGFDAGIDYKAE----DFAQALKEACPKGIDVYFENVGGEVLDAVLPL 238

Query: 241 LNWGAQILVIGFASG----EIPVIPANI--ALVKNWTVHGLYWGSYKIHRPHVLEDSLRE 294
           LN  A+I V G  S     E+P  P  +   + K   V G    S    R     ++LRE
Sbjct: 239 LNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFP---EALRE 295

Query: 295 LLLWAAKGLIT 305
           L  W  +G I 
Sbjct: 296 LGGWVKEGKIQ 306

Length = 340

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  108 bits (273), Expect = 4e-27
 Identities = 97/343 (28%), Positives = 149/343 (43%), Gaps = 54/343 (15%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P P+      V V+VKA  +  ++  + LG     PPL  V G ++SGTV+ VG  V + 
Sbjct: 18  PKPEPGPG-EVLVKVKACGICGSDIPRYLGTGAYHPPL--VLGHEFSGTVEEVGSGVDDL 74

Query: 90  KVGDTVCGFAAL---------------------------GSFAQFIVADQSELFPVPKGC 122
            VGD V     L                           G+FA+++      L  +P   
Sbjct: 75  AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHV 134

Query: 123 DLLAAAAL-PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-II 178
           D   AA + P A     VAL  V  A ++ G  ++V+G AG +G+ A+Q  K+ GA  +I
Sbjct: 135 DYEEAAMIEPAA-----VALHAVRLAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVI 188

Query: 179 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-S 237
           AV    EK+   + LG D  ++   E  +  V+E  + R   G D++ +  G   T E +
Sbjct: 189 AVDIDDEKLAVARELGADDTIN-PKEEDVEKVRELTEGR---GADLVIEAAGSPATIEQA 244

Query: 238 LKLLNWGAQILVIGFASGE--IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 295
           L L   G +++++G   G+  +        L K  T+ G  W SY    P    D  R  
Sbjct: 245 LALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQG-SWNSYSAPFPG---DEWRTA 300

Query: 296 LLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI-GKVMI 335
           L   A G I +   I+H     +   AF  + DR+   GKV++
Sbjct: 301 LDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  106 bits (268), Expect = 1e-26
 Identities = 91/349 (26%), Positives = 144/349 (41%), Gaps = 44/349 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+V          I     P VL   E PIP+      V +RVKA  LN +      G
Sbjct: 1   MKAIV----------IEQPGGPEVLKLREIPIPEPKPGW-VLIRVKAFGLNRSEIFTRQG 49

Query: 60  KYQEKPPLPF--VPGSDYSGTVDAVGPNVSNFKVGDTVC------GFAALGSFAQFIVAD 111
                P + F  V G +  G V+        F  G  V       G    GS+A++ +  
Sbjct: 50  ---HSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVP 104

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
             +++ +         AALP  + T+  +L     L  G  LL+ G    VG+AA+++ K
Sbjct: 105 NEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAK 164

Query: 172 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
             GAT+ A  R  E+   LK LG D VV + + ++   ++         G D + + VG 
Sbjct: 165 ALGATVTATTRSPERAALLKELGADEVV-IDDGAIAEQLRA-----APGGFDKVLELVGT 218

Query: 232 KLTKESLKLLNWGAQILVIGFASGEIPVIP-----ANIALVKNWTVHGLYWGSYKIHRPH 286
              K+SL+ L  G  + + G   G+   +       +I    N T+ G   G        
Sbjct: 219 ATLKDSLRHLRPGGIVCMTGLLGGQ-WTLEDFNPMDDIPSGVNLTLTGSSSGD------- 270

Query: 287 VLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           V +  L+EL  + A G + I  S  ++  E   A + +E  +  GKV++
Sbjct: 271 VPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score =  104 bits (261), Expect = 3e-25
 Identities = 75/242 (30%), Positives = 104/242 (42%), Gaps = 51/242 (21%)

Query: 1   MEALVCRKL--GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL 58
           M A   R+   GDP  +I  E  P+        P+L     + V V A  +NY N    L
Sbjct: 8   MYAFAIREERDGDPRQAIQLEVVPV--------PELGPGEVL-VAVMAAGVNYNNVWAAL 58

Query: 59  G---------KYQEKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV---C--------- 96
           G         +   K  LPF + GSD SG V  VGP V+ +KVGD V   C         
Sbjct: 59  GEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPD 118

Query: 97  ---------------GF-AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVA 140
                          G+    GSFA+F +    +L P PK      AA   +   T++  
Sbjct: 119 GRDGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQ 178

Query: 141 LVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 198
           LV    A +  G  +L+ GAAGG+G  A Q+ +  G   +AV    EK ++ +SLG + V
Sbjct: 179 LVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAV 238

Query: 199 VD 200
           +D
Sbjct: 239 ID 240

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score =  103 bits (258), Expect = 1e-24
 Identities = 77/266 (28%), Positives = 111/266 (41%), Gaps = 53/266 (19%)

Query: 1   MEALVCR--KLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL 58
           M A   R  + GDP  +I  E    V     P+P+L     V V V A  +NY N    L
Sbjct: 13  MYAFAIRPERYGDPAQAIQLE---DV-----PVPELGPGE-VLVAVMAAGVNYNNVWAAL 63

Query: 59  GK--------YQEKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV---CG--------- 97
           G+         +     P+ + GSD SG V AVG  V N+KVGD V   C          
Sbjct: 64  GEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPER 123

Query: 98  ------FAA----------LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVAL 141
                 F             GSFAQF +   ++L P PK      AAA  +   T++  L
Sbjct: 124 AGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRML 183

Query: 142 VHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 199
                  +  G  +L+ GA+GG+G  A+Q+ +  GA  +AV    EK ++ ++LG + V+
Sbjct: 184 FGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI 243

Query: 200 DLSNES---VIPSVKEFLKARKLKGV 222
           +  +     V+P V         K  
Sbjct: 244 NRRDFDHWGVLPDVNSEAYTAWTKEA 269

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  102 bits (255), Expect = 2e-24
 Identities = 85/336 (25%), Positives = 136/336 (40%), Gaps = 51/336 (15%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V +RV AT +  ++     G     PP   + G ++ G V  VG  V  FKVGD V    
Sbjct: 28  VLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEP 86

Query: 97  ------------------------GFAAL-----GSFAQFIVADQSELFPVPKGCDLLAA 127
                                   G+A L     G FA+++                  A
Sbjct: 87  NIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEA 146

Query: 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEK 186
           AAL     T++     RA +  G  ++V+G AG +G+ A+ + K+ GA+ +I V R  E+
Sbjct: 147 AALTEPLATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPER 205

Query: 187 IKF-LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWG 244
           ++   ++ G D VV+ S +     + E    R   G DV+ + VG      ++L+ L  G
Sbjct: 206 LELAKEAGGADVVVNPSEDDAGAEILELTGGR---GADVVIEAVGSPPALDQALEALRPG 262

Query: 245 AQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 304
             ++V+G   GE   +PA + + K  T+ G    S +      L+          A G I
Sbjct: 263 GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALD--------LLASGKI 314

Query: 305 TI--HISHTYSPSEANLAFSAIEDRK-VIGKVMIAF 337
                I+H     +A  A+    DRK    KV++  
Sbjct: 315 DPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  101 bits (255), Expect = 2e-24
 Identities = 95/382 (24%), Positives = 156/382 (40%), Gaps = 76/382 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A V  ++G P + I +    + L   +P P       V VR+ A  L +++   + G 
Sbjct: 1   MRAAVLHEVGKP-LEIEE----VELD--DPGP-----GEVLVRIAAAGLCHSDLHVVTGD 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------------- 97
                PLP V G + +G V+ VGP V+  K GD V       CG                
Sbjct: 49  L--PAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLG 106

Query: 98  ------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133
                                      LG+FA++ V  ++ +  +     L  AA L   
Sbjct: 107 AGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCG 166

Query: 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS 192
             T   A+V+ A++  G  + V+G  GGVG+ A+Q  ++ GA  IIAV    EK++  + 
Sbjct: 167 VTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR 225

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIG 251
            G  H V+ S +  + +V++    R   G D  ++ VG     +++L +   G   +V+G
Sbjct: 226 FGATHTVNASEDDAVEAVRDLTDGR---GADYAFEAVGRAATIRQALAMTRKGGTAVVVG 282

Query: 252 FASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--I 308
                  V +PA    +    + G  +GS    R     D  R L L+ A G + +   +
Sbjct: 283 MGPPGETVSLPALELFLSEKRLQGSLYGSANPRR-----DIPRLLDLYRA-GRLKLDELV 336

Query: 309 SHTYSPSEANLAFSAIEDRKVI 330
           +  YS  E N AF+ +   +  
Sbjct: 337 TRRYSLDEINEAFADMLAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 99.1 bits (248), Expect = 1e-23
 Identities = 82/347 (23%), Positives = 131/347 (37%), Gaps = 91/347 (26%)

Query: 40  VRVRVKA-----TSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDT 94
           V ++V A     T L+        G++   PPL  VPG +++G V AVG  V+ FKVGD 
Sbjct: 27  VLIKVAACGICGTDLHIYE-----GEFGAAPPL--VPGHEFAGVVVAVGSKVTGFKVGDR 79

Query: 95  V-------CG---------------FAALGS-----FAQFIVADQSELFPVPKGCDLLAA 127
           V       CG                 A+G      FA+++V    +++ +P       A
Sbjct: 80  VAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEA 139

Query: 128 AAL-PVAFGTSHVALVH---RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVAR 182
           A   P++        VH      +  G  +LV G AG +G+   Q+ K+ GA  +     
Sbjct: 140 ALAEPLS------CAVHGLDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEP 192

Query: 183 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLL 241
             EK++  K LG    VD S E          K     G DV+ +  G  K  +++++  
Sbjct: 193 NEEKLELAKKLGATETVDPSREDPEA-----QKEDNPYGFDVVIEATGVPKTLEQAIEYA 247

Query: 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-----------PHVLED 290
             G  +LV G       V   + A V            ++I +           P+    
Sbjct: 248 RRGGTVLVFG-------VYAPD-ARVS--------ISPFEIFQKELTIIGSFINPYTFPR 291

Query: 291 SLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           ++  LL     G I +   +SH     E   A   +     + KV++
Sbjct: 292 AI-ALL---ESGKIDVKGLVSHRLPLEEVPEALEGMRSGGAL-KVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 98.8 bits (247), Expect = 2e-23
 Identities = 72/225 (32%), Positives = 98/225 (43%), Gaps = 16/225 (7%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V +RV  +SLNY + L   G        P  PG D +GTV +       F+ GD V    
Sbjct: 30  VLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSSD--DPRFREGDEVLVTG 87

Query: 96  CGFAAL--GSFAQFIVADQSELFPVPKGCDLLAAAALPVA-F--GTSHVALVHRAQLSSG 150
                   G FA+++      + P+P+G  L  A  L  A F    S   L    Q    
Sbjct: 88  YDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPED 147

Query: 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 210
             +LV GA GGVG  AV I    G T++A+    E+  +LKSLG   V+D   + +  S 
Sbjct: 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDR-EDLLDESK 206

Query: 211 KEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
           K  LKAR    +D     VGG +    LK   +G  +   G A+G
Sbjct: 207 KPLLKARWAGAIDT----VGGDVLANLLKQTKYGGVVASCGNAAG 247

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 98.4 bits (246), Expect = 2e-23
 Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 12/255 (4%)

Query: 30  PIPQLNSSTA----VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN 85
            +P+          V ++V+A  +N ++   + G+Y     LP  PG + SGTV A G  
Sbjct: 19  SLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGG 78

Query: 86  -VSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH 143
            ++   +G  V   A   G++A++ VAD  +  P+P G      A+  V   T+ + ++ 
Sbjct: 79  PLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTA-LGMLE 137

Query: 144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN 203
            A+    + ++   AA  +G   V++ K  G  +I + R  E++  LK +G ++V++ S+
Sbjct: 138 TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSD 197

Query: 204 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-EIPVIPA 262
              +  +KE +         + +D VGG LT + L  + +G+ + V G+ SG     I  
Sbjct: 198 PDFLEDLKELIAKLNAT---IFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPIDP 254

Query: 263 NIALVKNWTVHGLYW 277
              + KN ++ G +W
Sbjct: 255 VDLIFKNKSIEG-FW 268

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 95.7 bits (239), Expect = 3e-22
 Identities = 103/375 (27%), Positives = 161/375 (42%), Gaps = 76/375 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKA-----TSLNYANYL 55
           M+ALVC K G   + + D   P V    E          V VRVK      + L+  +  
Sbjct: 1   MKALVCEKPGR--LEVVDIPEP-VPGAGE----------VLVRVKRVGICGSDLHIYHGR 47

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG--FAAL----- 101
                Y      P + G + SG V  VG  V+  KVGD V       CG  +A       
Sbjct: 48  NPFASY------PRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPN 101

Query: 102 -------------GSFAQFIVADQSELFPVPKGCDLLAAAAL-PVAFGTSHVALVHRAQL 147
                        G FA++IV     L  VP+G  L  AA + P+A G  H   V RA +
Sbjct: 102 CCENLQVLGVHRDGGFAEYIVVPADAL-LVPEGLSLDQAALVEPLAIGA-HA--VRRAGV 157

Query: 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
           ++G  +LV+GA G +G+  +Q+ K  GA +I V    E+++F + LG D  +++ +E V 
Sbjct: 158 TAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVA 216

Query: 208 PSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIAL 266
             ++E        G DV+ D  G   + +E+++L+  G +++++G + G +   P     
Sbjct: 217 ARLRELTDGE---GADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV-TFPDPEFH 272

Query: 267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAI 324
            K  T+ G         R    ED   +++     G +     I+H +   +   AF   
Sbjct: 273 KKELTILG--------SRNATRED-FPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLW 323

Query: 325 ED--RKVIGKVMIAF 337
           E     VI KV+I F
Sbjct: 324 EAPPGGVI-KVLIEF 337

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 94.3 bits (235), Expect = 9e-22
 Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 32/238 (13%)

Query: 17  HDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLN------YANYLQILGKYQEKPPLPF 69
            +  SP+ ++  + P+P       + V+V A +LN      Y +Y     K +EK     
Sbjct: 7   KNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHF-KVKEK----- 60

Query: 70  VPGSDYSGTVDAVGPNV-SNFKVGDTVCG-----FAALGSFAQFIVADQSELF----PVP 119
             G DYSG +  VG NV S +KVGD VCG     +   G+ +Q+++ D  +        P
Sbjct: 61  GLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKP 120

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGA--T 176
           +   L  AAA P+  GT++  L    Q L     +LVLG +  VG  A+Q+ K      T
Sbjct: 121 ENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGT 180

Query: 177 IIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG-VDVLYDPVGG 231
           ++     R AE  K    LG DH +D    S +  +K  L+  K +G  D++ D VGG
Sbjct: 181 VVGTCSSRSAELNKK---LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGG 235

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 93.5 bits (233), Expect = 9e-22
 Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 43/276 (15%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V ++V A  +  ++     G Y +    P V G ++SGT+  VGP+V  +KVGD V    
Sbjct: 29  VLIKVAAAGICGSDLHIYKGDY-DPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSET 87

Query: 96  ----CGFAAL--------------------GSFAQFIVADQSELFPVPKGCDLLAAAAL- 130
               CG                        G FA++++  +  L  +P+   L AAA   
Sbjct: 88  TFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAALTE 147

Query: 131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF- 189
           P+A   +  A+  R+ +  G  ++V G  G +G+ A Q+ K+ GAT++ V    ++++  
Sbjct: 148 PLA--VAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLD 204

Query: 190 -LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQI 247
             K LG D  V+   E +    +   +     G DV+ +  G     +++L+LL  G +I
Sbjct: 205 VAKELGADA-VNGGEEDL---AELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRI 260

Query: 248 LVIGFASGEIPVIPANIALVKNWTVHGLY---WGSY 280
           + +G        I     + K  +V G       S+
Sbjct: 261 VQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASW 296

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 82/300 (27%), Positives = 131/300 (43%), Gaps = 44/300 (14%)

Query: 65  PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGF------------AAL- 101
             LP V G +  G V AVGP+ ++ KVGD V          C               AL 
Sbjct: 64  VKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALG 123

Query: 102 ----GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 157
               G +A++++   S     P G D   AA L  +  T++ A V +         +V+ 
Sbjct: 124 IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSA-VKKLMPLVADEPVVII 182

Query: 158 AAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 216
            AGG+G+ A+ + K +  A II V     K++  K+ G D VV+ S+     + K  +KA
Sbjct: 183 GAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD---AAKRIIKA 239

Query: 217 RKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL 275
               GVD + D V    T   +  +L  G +++++G   GE  +    + L +  T+ G 
Sbjct: 240 AG-GGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPL-RALTIQGS 297

Query: 276 YWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           Y GS        LE+ LREL+  A  G +          S+ N A   ++  KV+G+ ++
Sbjct: 298 YVGS--------LEE-LRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 92.8 bits (231), Expect = 3e-21
 Identities = 86/387 (22%), Positives = 146/387 (37%), Gaps = 90/387 (23%)

Query: 3   ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ 62
           A V  + G P V    E +P         P+   +  VR+++ ATS+ + + L I G   
Sbjct: 5   AAVAWEAGKPLVIEEIEVAP---------PK---ANEVRIKMLATSVCHTDILAIEGFKA 52

Query: 63  EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG------------------ 97
                P + G + +G V++VG  V+N K GD V       CG                  
Sbjct: 53  --TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRA 110

Query: 98  ----------------------FAALGSFAQFIVADQS------ELFPVPKGCDLLAAAA 129
                                 F    +F+Q+ V D++         P+   C       
Sbjct: 111 NESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVC------L 164

Query: 130 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIK 188
           L   F T + A  + A++  G  + V G  G VG++A+   K+ GA+ II V    +K +
Sbjct: 165 LGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFE 223

Query: 189 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLK--LLNWGA 245
             K  G    ++  +      V E ++     GVD  ++  G   L  E+L+   L WG 
Sbjct: 224 KAKEFGATDFINPKDSD--KPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGV 281

Query: 246 QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGL 303
            ++V      E+ + P    L+   T  G ++G +K     P ++   + +      K  
Sbjct: 282 SVVVGVPPGAELSIRPFQ--LILGRTWKGSFFGGFKSRSDVPKLVSKYMNK------KFD 333

Query: 304 ITIHISHTYSPSEANLAFSAIEDRKVI 330
           +   I+H     E N  F  ++  + I
Sbjct: 334 LDELITHVLPFEEINKGFDLMKSGECI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 91.9 bits (229), Expect = 5e-21
 Identities = 96/361 (26%), Positives = 152/361 (42%), Gaps = 66/361 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V  K G        E++P+ L++  P+P+      V ++V+A  +   +   + G 
Sbjct: 1   MKAMVLEKPG------PIEENPLRLTEV-PVPEPGPGE-VLIKVEACGVCRTDLHIVEGD 52

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C-- 96
               P LP +PG +  G V+AVGP V+ F VGD V                      C  
Sbjct: 53  LPP-PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDN 111

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G+   G +A+++VAD+   +P+P+  D   AA L  A    + AL   A L  GQ 
Sbjct: 112 ARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQR 170

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           L + G  G     A+QI +  GA + A  R  E  +  + LG D   D S++        
Sbjct: 171 LGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGD-SDD-------- 220

Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
            L    L    +++ PV G L   +L+ +  G ++++ G    +IP              
Sbjct: 221 -LPPEPLDAA-IIFAPV-GALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE--------- 268

Query: 273 HGLYWGSYKIHRPHVL--EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 330
             L WG   I     L  +D   E L  AA+  I   +  TY   EAN A   +++ ++ 
Sbjct: 269 --LLWGEKTIRSVANLTRQD-GEEFLKLAAEIPIKPEV-ETYPLEEANEALQDLKEGRIR 324

Query: 331 G 331
           G
Sbjct: 325 G 325

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 91.5 bits (228), Expect = 6e-21
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 39/269 (14%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V ++V+A  + +++     G        P VPG +  G +DAVG  VS +KVGD V    
Sbjct: 28  VLIKVEACGVCHSDAFVKEGAMP-GLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGW 86

Query: 96  ------------------------CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131
                                    G    G +A++++A    L  +P   D   AA L 
Sbjct: 87  HGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLL 146

Query: 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191
            A  T+  AL + +    G ++ V G  GG+G  AVQ     G   +A++RG++K    +
Sbjct: 147 CAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR 204

Query: 192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVI 250
            LG  H +D S E V     E L  ++L G  ++       K     +  L    ++L++
Sbjct: 205 KLGAHHYIDTSKEDVA----EAL--QELGGAKLILATAPNAKAISALVGGLAPRGKLLIL 258

Query: 251 GFASGEIPVIPANIALVKNWTVHGLYWGS 279
           G A   + V P  + ++   ++HG   G+
Sbjct: 259 GAAGEPVAVSPLQL-IMGRKSIHGWPSGT 286

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 91.0 bits (226), Expect = 9e-21
 Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 10/172 (5%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           + V VKA S+N  +  ++  +   +   P + G D +G V AVG  V+ FK GD V    
Sbjct: 32  LLVEVKAISVNPVDT-KVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG 90

Query: 100 AL---GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQ 151
            +   GS A+F + D+  +   PK      AAALP+   T+   L  R  ++       +
Sbjct: 91  DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR 150

Query: 152 VLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLS 202
            LL++G AGGVG   +Q+ + + G T+IA A   E  +++  LG  HV+D S
Sbjct: 151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHS 202

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 89.7 bits (223), Expect = 3e-20
 Identities = 84/332 (25%), Positives = 142/332 (42%), Gaps = 53/332 (15%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V +RVKA+ L  ++       ++       +PG + +G V AVGP V++F+VGD V    
Sbjct: 27  VLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYH 86

Query: 96  ---C---------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131
              C                     G+   G  A++++  +  L P+P        A L 
Sbjct: 87  YVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLL 146

Query: 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFL 190
              GT++ AL  R  +S    +LV+G AG VG+ A+ + +  GA  +I V    E+++  
Sbjct: 147 CGIGTAYHAL-RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELA 204

Query: 191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD----PVGGKLTKESLKLLNWGAQ 246
           K+LG D V++   +     V+E  +     G DV  +        +L  E+  +  WG  
Sbjct: 205 KALGADFVINSGQD----DVQEIRELTSGAGADVAIECSGNTAARRLALEA--VRPWGRL 258

Query: 247 ILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 305
           +LV  G   GE+ +  +N  + K  T+ G ++ S            L    L   + L+T
Sbjct: 259 VLVGEG---GELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEF--LARHKLEVDR-LVT 312

Query: 306 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
               H +   +A  A+ A+  +   GKV+  F
Sbjct: 313 ----HRFGLDQAPEAY-ALFAQGESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 88.6 bits (220), Expect = 5e-20
 Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 20/305 (6%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQIL--GKYQEKPPLPFVPGSDYSGTVDAVGPNVS 87
           P P       V VRV+   +  ++         +   P  P  PG +  G V A+GP V 
Sbjct: 13  PRPTPGPGQ-VLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVR 71

Query: 88  NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 147
              VGD V G +  G+FA++ +AD     P+P   D  A    P+      + +  R  +
Sbjct: 72  GLAVGDRVAGLSG-GAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCA---LNVFRRGWI 127

Query: 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206
            +G+ + V+G AG +G+  +Q+    GA  +IA+ R   ++   + LG   VV   +E++
Sbjct: 128 RAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAI 186

Query: 207 IPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIA 265
           +  V+E        G DV+ + VG +     + +L+    ++++ G+       +P    
Sbjct: 187 VERVRELTGG---AGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTW 243

Query: 266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI--TIHISHTYSPSEANLAFSA 323
             K   +            P +  + +RE +   A G +     ++H +   E   AF A
Sbjct: 244 NWKGIDLINAVE-----RDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEA 298

Query: 324 IEDRK 328
              R 
Sbjct: 299 ARRRP 303

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 88.2 bits (219), Expect = 9e-20
 Identities = 82/271 (30%), Positives = 119/271 (43%), Gaps = 44/271 (16%)

Query: 3   ALVCRKLGD-PTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL------ 55
           ALV  K  D  +VS+          K   +  L     V +RV  +S+NY + L      
Sbjct: 3   ALVVEKDEDDVSVSV----------KNLTLDDLPEGD-VLIRVAYSSVNYKDGLASIPGG 51

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------GFAALGSFAQFIV 109
           +I+ +Y      PF+PG D +GTV  V  N   FK GD V       G +  G ++++  
Sbjct: 52  KIVKRY------PFIPGIDLAGTV--VESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYAR 103

Query: 110 ADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQVLLVLGAAGGVGV 164
                + P+PKG  L  A  L  A  T+ ++ +HR + +      G VL V GA GGVG 
Sbjct: 104 VPAEWVVPLPKGLTLKEAMILGTAGFTAALS-IHRLEENGLTPEQGPVL-VTGATGGVGS 161

Query: 165 AAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV 224
            AV I    G  ++A    A+   +LK LG   V+    E +     + L+ ++  G   
Sbjct: 162 LAVSILAKLGYEVVASTGKADAADYLKKLGAKEVI--PREELQEESIKPLEKQRWAGA-- 217

Query: 225 LYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
             DPVGGK     L  L +G  + V G   G
Sbjct: 218 -VDPVGGKTLAYLLSTLQYGGSVAVSGLTGG 247

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 81/344 (23%), Positives = 139/344 (40%), Gaps = 57/344 (16%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P+P+      V V+V+A  +   +  +I G +      P + G + +G +  VG  V+ F
Sbjct: 18  PVPEPGPG-EVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF 75

Query: 90  KVGD---------------------TVC------GFAALGSFAQFIV-----ADQSELFP 117
           KVGD                      +C      G    G FA+++        +  +  
Sbjct: 76  KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLK 135

Query: 118 VPKGCDL-LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA- 175
           +P       AA   P+A     +    +A +  G  +LV+G AG +G+    + K  GA 
Sbjct: 136 LPDNVSFEEAALVEPLA---CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKASGAR 191

Query: 176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLT 234
            +I       +++F K LG D+ +D + E ++  V+E    R   G DV+    G  +  
Sbjct: 192 KVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGR---GADVVIVATGSPEAQ 248

Query: 235 KESLKLLNWGAQILVI-GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 293
            ++L+L+  G +IL   G   G    I  N+   +  T+ G Y  S          +  +
Sbjct: 249 AQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS---------PEDYK 299

Query: 294 ELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           E L   A G I +   I+H +   +   AF    D K + K++I
Sbjct: 300 EALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSL-KIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 88.3 bits (219), Expect = 1e-19
 Identities = 80/344 (23%), Positives = 132/344 (38%), Gaps = 64/344 (18%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR++V AT + + +   I GK     PLP + G + +G V+++GP V+  K GD V    
Sbjct: 28  VRIKVVATGVCHTDLHVIDGKL--PTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLF 85

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +FA++ V  
Sbjct: 86  GPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVS 145

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           +  L  +     L     +   F T + A V+ A+++ G    V G  GGVG++ +   K
Sbjct: 146 EISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCK 204

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
             GA+ IIAV    +K +  K LG    ++   +   P + E L      GVD  ++ +G
Sbjct: 205 AAGASRIIAVDINKDKFEKAKQLGATECIN-PRDQDKP-IVEVLTEMTDGGVDYAFEVIG 262

Query: 231 G-KLTKESLKL--LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 287
                K++L    L  G  ++V    SG    +  N  L+   T+ G  +G +K      
Sbjct: 263 SADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPND-LLTGRTIKGTVFGGWKSKD--- 318

Query: 288 LEDSLRELLLWAAKGL-ITIHISHTYSPSEANLAFSAIEDRKVI 330
                + + L+  K   +   I+H     E N  F  +   + I
Sbjct: 319 --SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 87.6 bits (218), Expect = 2e-19
 Identities = 64/235 (27%), Positives = 91/235 (38%), Gaps = 44/235 (18%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------GFAAL 101
             P   G ++SG V  VG  V+ FKVGD V                         GF  L
Sbjct: 63  TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGL 122

Query: 102 GS----FAQFIVADQSELFPVPKGCDLLAAAAL--PVAFGTSHVAL--VHRAQLSSGQVL 153
           G     FA+++V     +  +P     L  AAL  P+A     VA   V R+    G   
Sbjct: 123 GGGGGGFAEYVVVPAYHVHKLPDNVP-LEEAALVEPLA-----VAWHAVRRSGFKPGDTA 176

Query: 154 LVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           LVLG AG +G+  +   K  GA+ II       + +  + LG   V+D +   V   V E
Sbjct: 177 LVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDV---VAE 232

Query: 213 FLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIAL 266
             K     GVDV +D  G + T   ++  L      + +      I   P ++ L
Sbjct: 233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVL 287

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 86.9 bits (216), Expect = 4e-19
 Identities = 85/345 (24%), Positives = 135/345 (39%), Gaps = 68/345 (19%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V VR+ AT + + +   + G   E    P V G + +G V+AVG  V++ K GD V    
Sbjct: 30  VLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLF 87

Query: 96  ---CG---------------------------------------FAALG--SFAQFIVAD 111
              CG                                       +  LG  +FA++ V  
Sbjct: 88  TPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVH 147

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           +  L  +     L  A  L     T   A+V+ A++  G  + V G  GGVG+AA+Q  K
Sbjct: 148 EISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAK 206

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
             GA  IIAV    EK++  K  G  H V+      +      L      G D  ++ VG
Sbjct: 207 AAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDG---GADYAFECVG 263

Query: 231 -GKLTKESLKLLNWGAQILVIGFA--SGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 287
             ++ +++L+  + G   ++IG A    EI   P  +   + W   G  +G     RP  
Sbjct: 264 NVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWK--GSAFGGA---RPRS 318

Query: 288 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVI 330
               +  L+     G + +   ++HT    + N AF  + + K I
Sbjct: 319 ---DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI 360

Length = 366

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 86.1 bits (214), Expect = 4e-19
 Identities = 75/225 (33%), Positives = 98/225 (43%), Gaps = 17/225 (7%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V ++V  +SLNY + L I GK       P +PG D +GTV  V      F+ GD V    
Sbjct: 29  VLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDEVIVTG 86

Query: 97  ---GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT---SHVALVHRAQLSSG 150
              G +  G ++Q+       L P+P+G  L  A AL  A  T   S +AL         
Sbjct: 87  YGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPED 146

Query: 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 210
             +LV GA GGVG  AV I    G  ++A    AE+  +LK LG   V+D   E + P  
Sbjct: 147 GPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVID--REDLSPPG 204

Query: 211 KEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
           K   K R    V    D VGG      L  L +G  +   G A G
Sbjct: 205 KPLEKERWAGAV----DTVGGHTLANVLAQLKYGGAVAACGLAGG 245

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 86.1 bits (214), Expect = 6e-19
 Identities = 83/310 (26%), Positives = 129/310 (41%), Gaps = 64/310 (20%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAA------------LGS-- 103
           P V G + SG V+AVGP V+    G  V          C +              LGS  
Sbjct: 54  PMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAM 113

Query: 104 --------FAQFIVADQSELFPVPKGCDLLAAA-ALPVAFGTSHVAL--VHRAQLSSGQV 152
                   F +++V D S+  P+P G  L  AA A P+A     VAL  V+RA   +G+ 
Sbjct: 114 RFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLA-----VALHAVNRAGDLAGKR 168

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVK 211
           +LV G AG +G   V   +  GA  I     A+  +   +++G D  V+L+ + +     
Sbjct: 169 VLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA--- 224

Query: 212 EFLKARKLKG-VDVLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANIALVKN 269
                   KG  DV+++  G      S L+++  G  ++ +G   G +P+ P N  + K 
Sbjct: 225 ----YAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPL-PLNALVAKE 279

Query: 270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDR 327
                   GS++        D   E +   A G I +   I+  +   EA  AF+   DR
Sbjct: 280 LD----LRGSFRFD------DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADR 329

Query: 328 KVIGKVMIAF 337
               KV ++F
Sbjct: 330 TRSVKVQLSF 339

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 80.4 bits (199), Expect = 1e-18
 Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 5/123 (4%)

Query: 161 GVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
           GVG+AAVQ+ K  GA  +IAV R  EK++  K LG DHV++  +E  +  V+E    R  
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGR-- 58

Query: 220 KGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 278
            GVDV+ D VG   T +++L+LL  G +++V+G   G     P    L+K  T+ G   G
Sbjct: 59  -GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 279 SYK 281
             +
Sbjct: 118 GRE 120

Length = 131

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 84.4 bits (209), Expect = 2e-18
 Identities = 91/330 (27%), Positives = 138/330 (41%), Gaps = 25/330 (7%)

Query: 14  VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS 73
           +  H    P VL   E  P   +   V+V  KA  +NY +     G Y   P LP   G+
Sbjct: 5   IEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLY-PPPSLPSGLGT 63

Query: 74  DYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
           + +G V  VG  V + KVGD V    +ALG+++        +   +P       AAA  +
Sbjct: 64  EAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFL 123

Query: 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 192
              T +  L    ++   +  L   AAGGVG+ A Q  K  GA +I     A+K +  K 
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK 183

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 252
            G   V++   E+++  VKE    +K   V V+YD VG    + SL  L     ++  G 
Sbjct: 184 AGAWQVINYREENIVERVKEITGGKK---VRVVYDSVGKDTWEASLDCLQRRGLMVSFGN 240

Query: 253 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LEDSLRELLLWAAKGL 303
           ASG  PV   N+ ++          GS  + RP +         L ++  EL    A G+
Sbjct: 241 ASG--PVTGVNLGILNQ-------KGSLYVTRPSLQGYITTREELTEASNELFSLIASGV 291

Query: 304 ITIHI--SHTYSPSEANLAFSAIEDRKVIG 331
           I + +     +   +A  A   +E R   G
Sbjct: 292 IKVDVAEQQKFPLKDAQRAHEILESRATQG 321

Length = 327

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 83.3 bits (207), Expect = 6e-18
 Identities = 79/325 (24%), Positives = 122/325 (37%), Gaps = 66/325 (20%)

Query: 65  PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV------CG---------------FAALG- 102
            PLP V G + +G V+AVG  V+  K GD V      CG               F  L  
Sbjct: 53  TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNF 112

Query: 103 ---------------------------SFAQFIVADQSELFPVPKGCDLLAAAALPVAFG 135
                                      SFA + V  +  +  V K   L   A L     
Sbjct: 113 SGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQ 172

Query: 136 TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG 194
           T   A+++  +   G  + V GA G VG+AAV   K+ G  TIIAV     +++  K LG
Sbjct: 173 TGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELG 231

Query: 195 VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFA 253
             HV++   E ++ +++E        GVD   D  G   + ++++  L     + ++G  
Sbjct: 232 ATHVINPKEEDLVAAIREITGG----GVDYALDTTGVPAVIEQAVDALAPRGTLALVGAP 287

Query: 254 S--GEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH-ISH 310
               E+  +  N  LV   T+ G+  G      P      +  L+    +G      +  
Sbjct: 288 PPGAEVT-LDVNDLLVSGKTIRGVIEGD---SVPQEF---IPRLIELYRQGKFPFDKLVT 340

Query: 311 TYSPSEANLAFSAIEDRKVIGKVMI 335
            Y   + N A +  E  KVI  V+ 
Sbjct: 341 FYPFEDINQAIADSESGKVIKPVLR 365

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 81.4 bits (202), Expect = 3e-17
 Identities = 90/351 (25%), Positives = 150/351 (42%), Gaps = 70/351 (19%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           PIP+      V VRV+A       ++Y  + +I G +  K P+  V G + +GTV AVG 
Sbjct: 16  PIPEP-GPGEVLVRVRAVGICGSDVHYYKHGRI-GDFVVKEPM--VLGHESAGTVVAVGS 71

Query: 85  NVSNFKVGDTV-------CG-----------------FAAL----GSFAQFIVADQSELF 116
            V++ KVGD V       C                  FAA     G+  +++        
Sbjct: 72  GVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCH 131

Query: 117 PVPKGCDLLAAAAL-PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
            +P    L   A + P++ G   V    RA +  G  +LV GA G +G+    + K  GA
Sbjct: 132 KLPDNVSLEEGALVEPLSVG---VHACRRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGA 187

Query: 176 T-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
           T ++       +++F K LG  H V++  E    S ++  +    KG DV+ +  G    
Sbjct: 188 TKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTG---- 243

Query: 235 KES-----LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL--YWGSYKIHRPHV 287
            ES     +     G  ++++G    E+ + P + A ++   + G+  Y  +Y    P  
Sbjct: 244 AESCIQTAIYATRPGGTVVLVGMGKPEVTL-PLSAASLREIDIRGVFRYANTY----PTA 298

Query: 288 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFS-AIEDRKVIGKVMI 335
           +     ELL   A G + +   I+H +   +A  AF  A + +K + KV+I
Sbjct: 299 I-----ELL---ASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 80.7 bits (200), Expect = 4e-17
 Identities = 71/290 (24%), Positives = 117/290 (40%), Gaps = 64/290 (22%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILG------KYQE------KPPLPFVPGSDYSG 77
           P+P+      V ++V A S        I G      ++ E      KPPL  + G +++G
Sbjct: 19  PVPKPGP-GEVLIKVLAAS--------ICGTDVHIYEWDEWAQSRIKPPL--IFGHEFAG 67

Query: 78  TVDAVGPNVSNFKVGDTV-------CGFAAL--------------------GSFAQFIVA 110
            V  VG  V+  KVGD V       CG                        G FA+++V 
Sbjct: 68  EVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVV 127

Query: 111 DQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS--SGQVLLVLGAAGGVGVAAVQ 168
            +  L+   K       A++    G +    VH       SG+ +L+ G  G +G+ A+ 
Sbjct: 128 PEENLWKNDKDIPP-EIASIQEPLGNA----VHTVLAGDVSGKSVLITGC-GPIGLMAIA 181

Query: 169 IGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227
           + K  GA  +IA      +++  K +G D V++   E     V E        GVDV+ +
Sbjct: 182 VAKAAGASLVIASDPNPYRLELAKKMGADVVINPREE----DVVEVKSVTDGTGVDVVLE 237

Query: 228 PVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 276
             G     ++ LK L  G ++ ++G   G + +   N+ + K  TV G+ 
Sbjct: 238 MSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGIT 287

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 98/380 (25%), Positives = 151/380 (39%), Gaps = 79/380 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V +  GD            V  +  PIPQ+   T   V+V A ++  ++    L  
Sbjct: 1   MKAVVFKGPGD------------VRVEEVPIPQIQDPTDAIVKVTAAAICGSD----LHI 44

Query: 61  YQ--EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG-------------- 97
           Y+        FV G ++ G V  VGP V   KVGD V       CG              
Sbjct: 45  YRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCA 104

Query: 98  ----FAALGSF------AQFI---VADQSELFPVPKGCD----LLAAAALPVAFGTSHVA 140
               F   GS       A+++    AD + L  +P G      LL    LP  +      
Sbjct: 105 KGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKLPDGLSDEAALLLGDILPTGYFG---- 159

Query: 141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV 199
              RAQ+  G  + V+G  G VG+ AV   +V GA  + AV    E+++   +LG    +
Sbjct: 160 -AKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGA-EPI 216

Query: 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGF-ASGEI 257
           +  +   +  V+E  + R   G DV+ + VGG      +  L+  G  I  +G   + E 
Sbjct: 217 NFEDAEPVERVREATEGR---GADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEF 273

Query: 258 PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEA 317
           P  P   A  KN T+    +G   +    +  + L   LL + +  +   I H     EA
Sbjct: 274 PF-PGLDAYNKNLTLR---FGRCPVRS--LFPELLP--LLESGRLDLEFLIDHRMPLEEA 325

Query: 318 NLAFSAIEDRKVIGKVMIAF 337
             A+   + RKV  KV++  
Sbjct: 326 PEAYRLFDKRKV-LKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 77.3 bits (191), Expect = 3e-16
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 22/194 (11%)

Query: 63  EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGC 122
           EK PLP  PG    G V  VG  V+ FK GD V  F   G  A+ +V   + L P+P G 
Sbjct: 16  EKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGL 72

Query: 123 DLLAAAALPVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIA 179
               AA   +A      AL  V  A+   G+ + V+G  G VG+ A Q+ K  GA  ++ 
Sbjct: 73  PPERAALTALA----ATALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVG 127

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESL 238
           V   A + +  ++LG         + V     + +  R   G DV+ +  G     + +L
Sbjct: 128 VDPDAARRELAEALGPA-------DPVAADTADEIGGR---GADVVIEASGSPSALETAL 177

Query: 239 KLLNWGAQILVIGF 252
           +LL    +++++G+
Sbjct: 178 RLLRDRGRVVLVGW 191

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 77.2 bits (191), Expect = 7e-16
 Identities = 68/253 (26%), Positives = 101/253 (39%), Gaps = 47/253 (18%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV-------------------------------- 95
           P VPG +  G V AVG  V+ FKVGD V                                
Sbjct: 54  PLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNG 113

Query: 96  ---CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G    G +A  IV D+  +F +P+G D  AAA L  A  T +  L  R  +  G+ 
Sbjct: 114 KYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKR 172

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           + V+G  GG+G  AV+  K  GA + A +R   K +    LG D  +   +        E
Sbjct: 173 VGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDP-------E 224

Query: 213 FLKARKLKGVDVLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 271
            +K      +D++ D V      +  L LL  G  ++++G     +PV P  + +    +
Sbjct: 225 AMKKAA-GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPL-IFGRKS 282

Query: 272 VHGLYWGSYKIHR 284
           V G   G  K  +
Sbjct: 283 VAGSLIGGRKETQ 295

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 26/226 (11%)

Query: 68  PFVPGSDYSGTVDAVGPNVSN-FKVGDTVCGFAAL-----------------GSFAQFIV 109
             V G ++ G V   GP      KVG  V     L                 G +A++++
Sbjct: 64  DIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYML 123

Query: 110 ADQSELFPVPKGCDLLAAA-ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 168
             ++ L  VP G  +  AA   P+A G   V    RA+L+ G+V LV+G  G +G+A + 
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVGLHAVR---RARLTPGEVALVIG-CGPIGLAVIA 179

Query: 169 IGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227
             K  G   I+A     E+     ++G D VVD + +S   +    L         V+++
Sbjct: 180 ALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFE 239

Query: 228 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
            VG   L ++ ++    G +I+V+G       + PA +A+ K  T+
Sbjct: 240 CVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPA-LAIRKELTL 284

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 52/263 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-G 59
           M+ALV    G   +S  D   P +   T+ I          V++  T++   + L IL G
Sbjct: 1   MKALV--YHGPGKISWEDRPKPTIQEPTDAI----------VKMLKTTICGTD-LHILKG 47

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALGSFAQ--- 106
                 P   + G +  G V+ VG  V+NFKVGD V          CG+   G ++    
Sbjct: 48  DVPTVTP-GRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCES 106

Query: 107 ------------------FIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
                                AD S L+ +P+G D  AA  L     T +   V   ++ 
Sbjct: 107 GGWILGNLIDGTQAEYVRIPHADNS-LYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVK 165

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
            G  + ++G AG VG+AA+   ++   + II V     +++  K LG  H V+ +    I
Sbjct: 166 PGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAI 224

Query: 208 PSVKEFLKARKLKGVDVLYDPVG 230
             V E    R   GVDV+ + VG
Sbjct: 225 EQVLELTDGR---GVDVVIEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 71.4 bits (176), Expect = 5e-14
 Identities = 60/172 (34%), Positives = 78/172 (45%), Gaps = 13/172 (7%)

Query: 39  AVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--- 95
            V V V  ++LNY + L I GK       P VPG D +GTV  V  +   FK GD V   
Sbjct: 29  DVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTV--VESSSPRFKPGDRVVLT 86

Query: 96  ---CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT---SHVALV-HRAQLS 148
               G    G +AQ        L P+P+G     A A+  A  T     +AL  H     
Sbjct: 87  GWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPG 146

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD 200
            G VL V GAAGGVG  AV +    G  ++A     E+  +L+SLG   ++D
Sbjct: 147 DGPVL-VTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 49/246 (19%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGF--------AAL--------- 101
           P+P V G ++ G V  VG  V+ FKVGD V       CG           L         
Sbjct: 56  PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV 115

Query: 102 ---GSFAQFIVADQSELFPVPKGCDL-LAAAALPVAFGTSHVALVHRAQLS---SGQVLL 154
              G+FA+++V     ++ +P      LAA   P  FG +    VH A LS    G+ +L
Sbjct: 116 NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDP--FGNA----VHTA-LSFDLVGEDVL 168

Query: 155 VLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213
           + GA G +G+ A  + K  GA  ++       +++  + +G    V+++ E +   + E 
Sbjct: 169 ITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAEL 227

Query: 214 LKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALV--KNW 270
                 +G DV  +  G     ++ L  +N G +I ++G   G++ +   +   V  K  
Sbjct: 228 ---GMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAI---DWNKVIFKGL 281

Query: 271 TVHGLY 276
           T+ G+Y
Sbjct: 282 TIKGIY 287

Length = 341

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 78/345 (22%), Positives = 131/345 (37%), Gaps = 64/345 (18%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V V++ A+ L +++   + G     P  P + G + +G V  VGP V+  K GD V    
Sbjct: 29  VLVKLVASGLCHSDEHLVTGDL-PMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSF 87

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                            LG+F+++ V  
Sbjct: 88  IPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVP 147

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           ++ +  +     L  A  +     T   + V+ A +  G  ++V+G  GGVG+ AVQ   
Sbjct: 148 EASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMG-IGGVGINAVQGAA 206

Query: 172 VCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
           V GA  +IAV     K +     G  H    S E  +  V+E    +      +    V 
Sbjct: 207 VAGARKVIAVDPVEFKREQALKFGATHAFA-SMEEAVQLVRELTNGQGADKTIITVGEVD 265

Query: 231 GKLTKESLKLLNWGAQILVIG---FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 287
           G+   E+L     G +++V G    A  ++ V    + L++      L+ G+     P  
Sbjct: 266 GEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQGTLFGGA----NPRA 321

Query: 288 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVI 330
             D  R L L+ A G + +   I+ TY+  + N  +  + D K I
Sbjct: 322 --DIPRLLELYRA-GKLKLDELITRTYTLDQINEGYQDMLDGKNI 363

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 69.2 bits (170), Expect = 4e-13
 Identities = 78/326 (23%), Positives = 124/326 (38%), Gaps = 73/326 (22%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNF------KVGDTV-------------C---------- 96
           PLP + G +  G V A+G  V+        KVGD V             C          
Sbjct: 53  PLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCEN 112

Query: 97  ----GFAA-------LGSFAQFIVADQ-SELFPVPKGCDLLAAAALPVAFGTSHVALVHR 144
               G  A        G +A+ I     + +  VP       AA    A  T  +A + R
Sbjct: 113 RKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATV-LAALDR 171

Query: 145 AQLSS-GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLS 202
           A     G  ++V GA G +G+ AV   K+ GA  +I +    E+++  +  G D  +D+ 
Sbjct: 172 AGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDID 230

Query: 203 NESVIPSVKEFLKARKL---KGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG--FASGE 256
               +P  +     R +   +G DV+ +  G      E L+LL  G   +++G    +G 
Sbjct: 231 ---ELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGT 287

Query: 257 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL------LLWAAKGLITIHISH 310
           +P+ P  I   KN T+ G+         P  L  ++R L        +A        ++H
Sbjct: 288 VPLDPERIVR-KNLTIIGV-HNY----DPSHLYRAVRFLERTQDRFPFAEL------VTH 335

Query: 311 TYSPSEANLAFSAIEDRKVIGKVMIA 336
            Y   + N A    E    + KV+I 
Sbjct: 336 RYPLEDINEALELAESGTAL-KVVID 360

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 64.6 bits (158), Expect = 5e-13
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 28/106 (26%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V VRVKA  +  ++     G       LP + G + +G V+ VGP V+  KVGD V    
Sbjct: 4   VLVRVKAAGICGSDLHIYRG-EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 97  ------------------------GFAALGSFAQFIVADQSELFPV 118
                                   G    G FA+++V     L P+
Sbjct: 63  LIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 69.0 bits (169), Expect = 5e-13
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 18/196 (9%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPV-PKGCD- 123
           P       D  G           F VGD V  F     +  + V D S L  V P+  D 
Sbjct: 67  PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNW--PWQTYAVLDGSSLEKVDPQLVDG 124

Query: 124 ----LLAAAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGAT- 176
                L A  LP    T+ + +  +  ++ G  Q ++V GAAG  G  A QIG++ G + 
Sbjct: 125 HLSYFLGAVGLPGL--TALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSR 182

Query: 177 IIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235
           ++ +    EK + LKS LG D  ++   ++V     E L+    +GVDV +D VGG+++ 
Sbjct: 183 VVGICGSDEKCQLLKSELGFDAAINYKTDNVA----ERLRELCPEGVDVYFDNVGGEISD 238

Query: 236 ESLKLLNWGAQILVIG 251
             +  +N  + I++ G
Sbjct: 239 TVISQMNENSHIILCG 254

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 70/281 (24%), Positives = 107/281 (38%), Gaps = 44/281 (15%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQEKPPLPFVPGSDYSGTVDAVGPNVSN 88
           P P++       VRV ATS+  ++ L I  G          + G ++ G V  VG +V  
Sbjct: 18  PDPKIQGPHDAIVRVTATSICGSD-LHIYRGGVPGAKH-GMILGHEFVGEVVEVGSDVKR 75

Query: 89  FKVGDTV-------CG----------------------FAAL-GSFAQFIV---ADQSEL 115
            K GD V       CG                         + G  A+++    AD + L
Sbjct: 76  LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-L 134

Query: 116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
             +P G     A  L     T        A +  G  + V+G AG VG+ AV   ++ GA
Sbjct: 135 AKIPDGLPDEDALMLSDILPTGFHGAE-LAGIKPGSTVAVIG-AGPVGLCAVAGARLLGA 192

Query: 176 T-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
             IIAV    E++   K  G   +++  N  ++  + E    R   GVD + + VG + T
Sbjct: 193 ARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGR---GVDCVIEAVGFEET 249

Query: 235 KES-LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 274
            E  +K++  G  I  +G      P+        KN T   
Sbjct: 250 FEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKT 290

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 14/143 (9%)

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 252
           LG D V+D + E       +F +A   +GVDV+ D VGG+    +L  L  G +++ IG 
Sbjct: 1   LGADEVIDYTTE-------DFEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGG 53

Query: 253 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY 312
                      +++       G+         P      L EL      G +   I   +
Sbjct: 54  P-------DLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDRVF 106

Query: 313 SPSEANLAFSAIEDRKVIGKVMI 335
              EA  A   +E  +  GKV++
Sbjct: 107 PLEEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 67.2 bits (164), Expect = 2e-12
 Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 37/215 (17%)

Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           +V    +    V     PIP++     V V+V ++ L  ++  +I          P   G
Sbjct: 3   SVVNDTDGI--VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHY--YPITLG 58

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVC---------------GFAAL------------GSFA 105
            ++SG V+AVG  V +   GD V                GF +L            G  A
Sbjct: 59  HEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNA 118

Query: 106 QFIVADQSELFPVPKGCDLLAAAAL-PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 164
           ++IV  +  LF +P    +   A + P+  G   +   H AQ   G+ ++++G AG +G+
Sbjct: 119 EYIVVKRKNLFALPTDMPIEDGAFIEPITVG---LHAFHLAQGCEGKNVIIIG-AGTIGL 174

Query: 165 AAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHV 198
            A+Q     GA ++ A+   +EK+   KSLG    
Sbjct: 175 LAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQT 209

Length = 347

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 67.2 bits (164), Expect = 2e-12
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 45/281 (16%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           P+P+      V ++V ATS     ++  N+ +     Q +   P V G + +G V  +GP
Sbjct: 17  PVPEPGPGE-VLIKVLATSICGTDVHIYNWDEW---AQSRIKPPQVVGHEVAGEVVGIGP 72

Query: 85  NVSNFKVGDTV-------CG--FAAL------------------GSFAQFIVADQSELFP 117
            V   KVGD V       CG  +A                    G FA++ V     ++ 
Sbjct: 73  GVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWK 132

Query: 118 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT- 176
            PK       A +    G + V  V    +S   VL+    AG +G+ A+ + K  GA  
Sbjct: 133 NPKSIP-PEYATIQEPLGNA-VHTVLAGPISGKSVLVT--GAGPIGLMAIAVAKASGAYP 188

Query: 177 IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTK 235
           +I       +++  K +G  +VV+   E V+  V +       +GVDV  +  G  K  +
Sbjct: 189 VIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDG---EGVDVFLEMSGAPKALE 245

Query: 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 276
           + L+ +  G ++ ++G   G++ +   N  + K  T++G+ 
Sbjct: 246 QGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT 286

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 13/172 (7%)

Query: 87  SNFKVGDTVCGFAALGSFAQFIV--ADQSELFPVP--KGCDLLAAAALPV--AFG-TSHV 139
           S F VG  V      G     +    DQ +L+ +P     DL  + AL V    G T++ 
Sbjct: 76  SKFPVGTIVVAS--FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYF 133

Query: 140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 199
            L+   +  +G+ ++V GAAG VG    QI K+ G  +I  A   +K+ +LK LG D V 
Sbjct: 134 GLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVF 193

Query: 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 251
           +        S++E LK     G+D  +D VGG+ +   L  +N   ++ V G
Sbjct: 194 NYKTV----SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCG 241

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 65.0 bits (159), Expect = 9e-12
 Identities = 64/220 (29%), Positives = 89/220 (40%), Gaps = 40/220 (18%)

Query: 77  GTVDAVGPNVSNFKVGDTV---------------CGFAAL---------------GSFAQ 106
           G V+ VG  V +FK GD V                G+ +                G FA+
Sbjct: 63  GVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAE 122

Query: 107 -FIVAD-QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 164
            F V D  + L P+P G     A  LP    T        A +  G  + V G  G VG+
Sbjct: 123 YFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFG-IGPVGL 180

Query: 165 AAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 223
            AV   ++ GA  IIAV     +++  K  G   +VD  N  V   V++ LK    KGVD
Sbjct: 181 MAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDV---VEQILKLTGGKGVD 237

Query: 224 VLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPV-IP 261
            +    GG+ T E  LK+L  G  I  + +   +  + IP
Sbjct: 238 AVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIP 277

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 78/348 (22%), Positives = 136/348 (39%), Gaps = 68/348 (19%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKP-PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--- 95
           V V++ A  L +++   I G   ++P PLP   G + +G V  VG  V++ +VGD V   
Sbjct: 36  VLVKIAAAGLCHSDLSVING---DRPRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLV 92

Query: 96  ----CG-----------------------------------------FAALGSFAQFIVA 110
               CG                                            + +FA++ V 
Sbjct: 93  FVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV 152

Query: 111 DQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG 170
            +  +  + K   L  AA    A  T   A+V+ A +  GQ + V+G  GGVG++A+   
Sbjct: 153 SRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGA 211

Query: 171 KVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229
              GA+ ++AV    +K+   + LG    V+  + + +  V+E        GVD  ++  
Sbjct: 212 VAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGG----GVDYAFEMA 267

Query: 230 GGKLTKES-LKLLNWGAQILVIGFASGE--IPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
           G     E+  ++   G   +  G    E  + V   ++   +  T+ G Y GS    R  
Sbjct: 268 GSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV-AEERTLKGSYMGSCVPRR-- 324

Query: 287 VLEDSLRELLLWAAKGL-ITIHISHTYSPSEANLAFSAIEDRKVIGKV 333
              D  R L L+ +  L +   ++H     E N  F  +   + + +V
Sbjct: 325 ---DIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 12/178 (6%)

Query: 136 TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV 195
           T++  L+    +  G+ ++V  AAG VG    QI K+ G  ++  A   EK+ +LK LG 
Sbjct: 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGF 184

Query: 196 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS- 254
           D      N   + S++E LK     G D  +D VGG+ +   +  +    +I + G  S 
Sbjct: 185 DVAF---NYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIST 241

Query: 255 ----GEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH 307
               G +P  P   I + +   + G     ++     V + +L+ELL W  +G I   
Sbjct: 242 YNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQ---GEVRQKALKELLKWVLEGKIQYK 296

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 63.3 bits (154), Expect = 3e-11
 Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 38/230 (16%)

Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTVC---------------------------GFA 99
            P V G ++SG V+  G NV NF+ GD V                            GF+
Sbjct: 87  FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFS 146

Query: 100 ALGSFAQFIVADQ------SELFPVPKGCDLLAAAALPVAFGTSHVALVHRA-QLSSGQV 152
           A G+FA++I  +       +EL  +        A AL      ++  L  R      G  
Sbjct: 147 ADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAY 206

Query: 153 LLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211
           ++V G AG +G+AA+ + K  GA+ +IA     E+    K +G D+V + +      S +
Sbjct: 207 VVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGE 265

Query: 212 EFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPV 259
           + ++  K  G D+  +  G       +  K +    +I+ IG A+  +P+
Sbjct: 266 KVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPL 315

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 62.2 bits (151), Expect = 8e-11
 Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 17/176 (9%)

Query: 102 GSFAQFIVADQSELFPVPKGCDLLAAAALPV--------AFGTSHVALVHRAQLSSGQVL 153
           G FA  IV     L  V +    LAAA LP+        A  T + A V +A L  G ++
Sbjct: 114 GGFASHIVVPAKGLCVVDEA--RLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLV 170

Query: 154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV---DLSNESVIPSV 210
           +V+GA GGVG   VQ  K  GA ++A+    EK++ +K  G D  +   D S   V   +
Sbjct: 171 IVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLI 229

Query: 211 KEFLKARKLKGVD-VLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANI 264
           K F KAR L+     +++  G K  +ES L LL+ G  ++V+G+   +     +N+
Sbjct: 230 KAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNL 285

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 45/204 (22%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGD-------TVCG-------------FAALGSFAQF 107
           PF+ G + +G V+AVG  V++   GD        VCG             F    +  + 
Sbjct: 55  PFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKM 114

Query: 108 IVADQSELFP------------VPKG-CDLLAAAALPVAFG-------TSHVALVHRAQL 147
            + D +EL P            V  G C  +  AA P A G           A V+   +
Sbjct: 115 TLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV 174

Query: 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESV 206
             G  + V+G  GGVG AA+    + GA+ IIAV     K+++ +  G  H V+ S    
Sbjct: 175 KRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDP 233

Query: 207 IPSVKEFLKARKLKGVDVLYDPVG 230
           + +++         G DV+ D VG
Sbjct: 234 VEAIRALTGGF---GADVVIDAVG 254

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 59.4 bits (144), Expect = 7e-10
 Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 48/263 (18%)

Query: 40  VRVRVKA-----TSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDT 94
           VRVR+KA     + ++Y   ++    +  K P+  V G + +G ++ VG  V +  VGD 
Sbjct: 44  VRVRMKAVGICGSDVHYLKTMRC-ADFVVKEPM--VIGHECAGIIEEVGSEVKHLVVGDR 100

Query: 95  V-------------C--GFAAL-------------GSFAQFIVADQSELFPVPKGCDLLA 126
           V             C  G   L             GS A  +V      F +P+   L  
Sbjct: 101 VALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE 160

Query: 127 AAAL-PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA 184
            A   P++ G   V    RA +     +LV+GA G +G+  +   +  GA  I+ V    
Sbjct: 161 GAMCEPLSVG---VHACRRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDD 216

Query: 185 EKIKFLKSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLL 241
           E++   K LG D +V +S   E V   V+E  KA    G+DV +D VG  K    +L+  
Sbjct: 217 ERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMG-GGIDVSFDCVGFNKTMSTALEAT 275

Query: 242 NWGAQILVIGFASGE--IPVIPA 262
             G ++ ++G    E  +P+ PA
Sbjct: 276 RAGGKVCLVGMGHNEMTVPLTPA 298

Length = 364

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 56.3 bits (136), Expect = 6e-09
 Identities = 84/350 (24%), Positives = 140/350 (40%), Gaps = 70/350 (20%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGK----YQEKPPL---PFVPGSDYSGTVDAV 82
           PIPQ  ++  VRV+VK           I G     Y+   P    P V G ++ G +DAV
Sbjct: 18  PIPQ-PAAGEVRVKVK--------LAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAV 68

Query: 83  GPNVSNFKVGDTV-------CG---------------FAAL-----GSFAQFIVADQSEL 115
           G  V   ++G+ V       CG                  L     G F+++ V      
Sbjct: 69  GEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNA 128

Query: 116 FPVPKGC-DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK-VC 173
             +P    D  A    P     +   +  R   +   V L+ G AG VG+  VQ+ K V 
Sbjct: 129 HRIPDAIADQYAVMVEPFTIAAN---VTGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVY 184

Query: 174 GA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG- 231
               +I   R  E++   K  G D V++ + E     + E L+ + +K   ++ D     
Sbjct: 185 NVKAVIVADRIDERLALAKESGADWVINNAQE----PLGEALEEKGIKPT-LIIDAACHP 239

Query: 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
            + +E++ L +  A+I+++GF+S    ++   I   K  ++      + K   P V++  
Sbjct: 240 SILEEAVTLASPAARIVLMGFSSEPSEIVQQGIT-GKELSIFSSRLNANKF--PVVID-- 294

Query: 292 LRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIE-DRKVIGKVMIAFD 338
                 W +KGLI     I+HT+       A    E D++   KV++ F 
Sbjct: 295 ------WLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA 338

Length = 339

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 39/249 (15%)

Query: 68  PFVPGSDYSG-----TVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGC 122
           PFVPG    G      VD+  PN   FK GD + G      ++  I +  ++L  +    
Sbjct: 73  PFVPGQRIEGFGVSKVVDSDDPN---FKPGDLISGITGWEEYS-LIRSSDNQLRKIQLQD 128

Query: 123 DLLAAAALPVAFGTSHVALVHRAQLSS------------GQVLLVLGAAGGVGVAAVQIG 170
           D+      P+++   H+ L+  A  ++            G  + V  A+G VG    Q+ 
Sbjct: 129 DI------PLSY---HLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLA 179

Query: 171 KVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229
           K+ G  ++  A  ++K+  LK+ LG D   +   E   P +   LK    +G+D+ +D V
Sbjct: 180 KLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEE---PDLDAALKRYFPEGIDIYFDNV 236

Query: 230 GGKLTKESLKLLNWGAQILVIGFASGEIPVIPANI-----ALVKNWTVHGLYWGSYKIHR 284
           GG +   +L  +    +I V G  S         I      + K   + G     Y    
Sbjct: 237 GGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLF 296

Query: 285 PHVLEDSLR 293
           P  LE+  R
Sbjct: 297 PQFLENVSR 305

Length = 348

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 68/289 (23%), Positives = 111/289 (38%), Gaps = 37/289 (12%)

Query: 68  PFVPGS--DYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDL- 124
           PF PG      G    V     +FKVGD V GF     + ++ +        +P+G DL 
Sbjct: 68  PFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTG---WEEYSL--------IPRGQDLR 116

Query: 125 -LAAAALPV-----AFG----TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
            +    +P+       G    T++       +   G+ + V  A+G VG    Q+ K+ G
Sbjct: 117 KIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKG 176

Query: 175 ATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 233
             ++  A   EK+  LK+ LG D   +   E   P +   LK     G+D+ +D VGGK+
Sbjct: 177 CYVVGSAGSDEKVDLLKNKLGFDDAFNYKEE---PDLDAALKRYFPNGIDIYFDNVGGKM 233

Query: 234 TKESLKLLNWGAQILVIGFAS----GEIPVIPANIALV-KNWTVHGLYWGSYKIHRPHVL 288
               L  +N   +I   G  S         +   + ++ K   + G   G Y     H  
Sbjct: 234 LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL----HRY 289

Query: 289 EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
            + L E+  +  +G +            A  AF  +     IGK ++  
Sbjct: 290 PEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 81/353 (22%), Positives = 141/353 (39%), Gaps = 81/353 (22%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT + + +   + G   E    P + G + +G V++VG  V++ K GD V    
Sbjct: 30  VRIKILATGVCHTDAYTLSGADPEGL-FPVILGHEGAGIVESVGEGVTSVKPGDHVIPLY 88

Query: 96  -----------------CG-----------------FAALG----------SFAQF-IVA 110
                            C                  F+  G          +F+++ +VA
Sbjct: 89  TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVA 148

Query: 111 DQS-----ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVA 165
           + S        P+ K C  L    +   +G    A+++ A++  G  + V G  G VG+A
Sbjct: 149 EISVAKINPEAPLDKVC--LLGCGVTTGYG----AVLNTAKVEPGSTVAVFGL-GAVGLA 201

Query: 166 AVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV 224
            +Q  K  GA+ II +    +K +  K  G    V+  +      +++ L      GVD 
Sbjct: 202 VIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHD--KPIQQVLVEMTDGGVDY 259

Query: 225 LYDPVGG-KLTKESLKLLN--WGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGS 279
            ++ +G  K+ + +L+  +  WG  + +IG A+   EI   P    LV      G  +G 
Sbjct: 260 TFECIGNVKVMRAALEACHKGWGTSV-IIGVAAAGQEISTRPFQ--LVTGRVWKGTAFGG 316

Query: 280 YKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI 330
           +K          + +L+    KG I +   I+HT    E N AF  +   K I
Sbjct: 317 WKS------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSI 363

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 32/166 (19%)

Query: 77  GTVDAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFI 108
           G V  VGP V++ KVGD                      T+C      G+   G  A+  
Sbjct: 63  GIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQC 122

Query: 109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 168
           +        VP+G D   A+++  A  T++ A +  + +  GQ + + G AGG+G  A+Q
Sbjct: 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKA-IKVSGIKPGQWIAIYG-AGGLGNLALQ 180

Query: 169 IGK-VCGATIIAVARGAEKIKFLKSLGVDHVVD-LSNESVIPSVKE 212
             K V  A +IAV    +K+   K +G D  ++    E V   ++E
Sbjct: 181 YAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQE 226

Length = 338

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 49.8 bits (120), Expect = 8e-07
 Identities = 63/272 (23%), Positives = 95/272 (34%), Gaps = 97/272 (35%)

Query: 30  PIPQLNSSTAVRVRVKATSL---------NYANYLQ---ILGKYQEKPPLPFVPGSDYSG 77
           P P++   T   VRV AT++          Y   ++   ILG   E     F+      G
Sbjct: 18  PDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILG--HE-----FM------G 64

Query: 78  TVDAVGPNVSNFKVGDTV-------CG---------FAA--------------------- 100
            V+ VGP V N KVGD V       CG         ++                      
Sbjct: 65  VVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGI 124

Query: 101 ------LGSFAQFIVADQSE----------LFPVPKGCD----LLAAAALPVAFGTSHVA 140
                  G +A      Q+E           F +P        L  +  LP    T + A
Sbjct: 125 FGYSHLTGGYA----GGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILP----TGYHA 176

Query: 141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV 199
               A++  G  + V G  G VG+ A +  K+ GA  +IA+ R  E+++  +S      +
Sbjct: 177 AEL-AEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234

Query: 200 DLSNESVIPS-VKEFLKARKLKGVDVLYDPVG 230
           +      +   ++E    R   G DV  D VG
Sbjct: 235 NFEEVDDVVEALRELTGGR---GPDVCIDAVG 263

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 45/165 (27%), Positives = 62/165 (37%), Gaps = 37/165 (22%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV--------C----------------------- 96
           P VPG +  G V  +G NV  FK GD V        C                       
Sbjct: 67  PIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNS 126

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G    G ++  IV DQ  +   P    L A A L  A  T +  + +      G+ 
Sbjct: 127 IGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKH 186

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD 196
           L V G  GG+G  AV+IGK  G  +  ++  + K  + +  LG D
Sbjct: 187 LGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGAD 230

Length = 360

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 52/204 (25%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT +  ++   + GK     P P + G + +G V++VG  V+  K GD V    
Sbjct: 35  VRIKIVATGICRSDDHVVSGK--LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLF 92

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +F+++ V D
Sbjct: 93  VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVD 152

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           +  +  +     L     +   F T + A V+ A+++ G    V G  GGVG++A+   K
Sbjct: 153 EIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCK 211

Query: 172 VCGAT-IIAVARGAEKIKFLKSLG 194
             GA+ IIAV    +K    K LG
Sbjct: 212 AAGASRIIAVDINKDKFAKAKELG 235

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 78/353 (22%), Positives = 139/353 (39%), Gaps = 73/353 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V VR+ AT + + +   + G   E    P + G + +G V+AVG  V++ KVGD V    
Sbjct: 29  VLVRIVATGVCHTDAFTLSGADPEGV-FPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLY 87

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         +    +F+++ V  
Sbjct: 88  TAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVP 147

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           +  L  +     L     L     T   A+++ A++  G  + V G  GG+G++ +Q  +
Sbjct: 148 EISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGAR 206

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
           +  A+ IIA+     K +  K LG    V+ ++      ++E +      GVD  ++ +G
Sbjct: 207 MAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD--KPIQEVIVEITDGGVDYSFECIG 264

Query: 231 G-KLTKESLKLLN--WGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGSYK--IH 283
              + + +L+  +  WG  I +IG A    EI   P  +   + W   G  +G  K    
Sbjct: 265 NVNVMRAALECCHKGWGESI-IIGVAGAGQEISTRPFQLVTGRVW--RGSAFGGVKGRTE 321

Query: 284 RPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVM 334
            P ++E  +        KG I +   ++HT    + N AF  + + K I  V+
Sbjct: 322 LPGIVEQYM--------KGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVI 366

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 37/174 (21%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV--------C----------------------- 96
           P VPG +  G V  VG +VS F VGD V        C                       
Sbjct: 64  PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYND 123

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G    G FA  +V DQ  +  +P+G     AA L  A  T +  L H     SG  
Sbjct: 124 VYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLR 183

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNES 205
             +LG  GGVG   V+I K  G  +  ++   +K  + L+ LG D  +  S+ +
Sbjct: 184 GGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAA 236

Length = 357

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 43/202 (21%)

Query: 72  GSDYSGTVDAVGPNVSNFKVGDTV----------C-----GFAA----LGSFAQFIVADQ 112
           G ++ G V+ VG  V++ K GD V          C     GF       G +  F+   Q
Sbjct: 58  GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQ 117

Query: 113 SE----------LFPVPK---GCDLLAAAALPVA--FGTSHVALVHRAQLSSGQVLLVLG 157
            E          L  VP      + L  + L ++   GT H A V  A +  G  ++V+G
Sbjct: 118 GEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAV-SAGVRPGSTVVVVG 176

Query: 158 AAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 216
             G VG+ AV   K  GA  IIA++R  ++    +  G   +V    E  +  V+E    
Sbjct: 177 -DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGG 235

Query: 217 RKLKGVDVLYDPVGGKLTKESL 238
               G D + + VG   T+ES+
Sbjct: 236 ---VGADAVLECVG---TQESM 251

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 43.9 bits (103), Expect = 7e-05
 Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 36/165 (21%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P +PG +  G    VG NV+ FK GD V                      C         
Sbjct: 61  PIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNS 120

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G    G ++  IV D   +  +P G    + A L  A  T +  + +         
Sbjct: 121 RSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK 180

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVD 196
            L +   GG+G  AV+IGK  G  +  ++R +EK +  +  LG D
Sbjct: 181 RLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD 225

Length = 375

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV---VDL 201
             +  +V+LV GAAGG+G AA Q     G  ++   R  E+ +    SLG DH    +D+
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDV 60

Query: 202 SNESVIPSVKEFLKARKLKGVDVLYDPVG 230
           S+E+ I    E L  R+   +DVL +  G
Sbjct: 61  SDEAQIREGFEQL-HREFGRIDVLVNNAG 88

Length = 520

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 41.4 bits (97), Expect = 5e-04
 Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 76/267 (28%)

Query: 22  PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
            +V+ + E  P       +R++V +TSL  ++    L  ++ +   P + G + SG V++
Sbjct: 24  ALVMEEVEVSPP--QPLEIRIKVVSTSLCRSD----LSAWESQALFPRIFGHEASGIVES 77

Query: 82  VGPNVSNFKVGDTV-------CG------------------------------------- 97
           +G  V+ F+ GD V       CG                                     
Sbjct: 78  IGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGK 137

Query: 98  ----FAALGSFAQFIVADQ------SELFPVPKGCDLLA---AAALPVAFGTSHVALVHR 144
               + A+ SF+++ V           L P+ K C LL+   AA L  A+          
Sbjct: 138 PVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKIC-LLSCGVAAGLGAAWNV-------- 188

Query: 145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN 203
           A +S G  +++ G  G VG++  Q  K+ GA+ II V    EK +  K+ GV   ++  N
Sbjct: 189 ADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN-PN 246

Query: 204 ESVIPSVKEFLKARKLKGVDVLYDPVG 230
           +   P +++ +K     G D  ++ VG
Sbjct: 247 DLSEP-IQQVIKRMTGGGADYSFECVG 272

Length = 378

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 32/167 (19%)

Query: 66  PLPFVPGSDYSGTVDAVGPN-------VS--NFKVGDTVCGFAAL--------------- 101
           P P VPG ++ G V+            V   N   G        L               
Sbjct: 49  PFPGVPGHEFVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDR 108

Query: 102 -GSFAQFIVADQSELFPVPKG-CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 159
            G+FA+++      L  VP    D  A  A P+A     +  V    ++ G  + VLG  
Sbjct: 109 DGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVP---ITPGDKVAVLG-D 164

Query: 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNE 204
           G +G+   Q+  + G  ++ V R +EK+   + LGV+     +  +E
Sbjct: 165 GKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAESE 211

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 81/382 (21%), Positives = 139/382 (36%), Gaps = 94/382 (24%)

Query: 3   ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ 62
           A V  + G P V    E +P         PQ   +  VR+++  TSL + +      K Q
Sbjct: 5   AAVAWEAGKPLVIEEVEVAP---------PQ---AMEVRIKILHTSLCHTDVYFWEAKGQ 52

Query: 63  EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG------------------ 97
             P  P + G + +G V++VG  V++ K GD V       C                   
Sbjct: 53  T-PLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRI 111

Query: 98  ------------------------FAALGSFAQFIVADQ------SELFPVPKGCDLLAA 127
                                   F    +F+++ V         +   P+ K C  L +
Sbjct: 112 NTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVC--LLS 169

Query: 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEK 186
             +    G    A  + A++  G  + + G  G VG+A  +  ++ GA+ II V     K
Sbjct: 170 CGVSTGLG----AAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSK 224

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLN--W 243
            +  K  GV   V+  +      V+E +      GVD  ++  G       + + ++  W
Sbjct: 225 FEQAKKFGVTEFVNPKDHD--KPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW 282

Query: 244 GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK--IHRPHVLEDSLRELLLWAAK 301
           G  +L+ G    +       + L+   T+ G  +G YK     P+++E  +        K
Sbjct: 283 GVTVLL-GVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYM--------K 333

Query: 302 GLITI--HISHTYSPSEANLAF 321
             + +   I+H    SE N AF
Sbjct: 334 KELELEKFITHELPFSEINKAF 355

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV---ARGAEKIKFLKSLGVDHV---VDLSN 203
           G+V LV G A G+G+A  +     GA ++        AEK+      G   +    D+++
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 204 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK--ESLKLLNWGAQILVIGFAS 254
           E+ + S  E     +  G+D++    G   +       L +W   + +     
Sbjct: 61  EAQVQSAFE-QAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGH 112

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 52/217 (23%), Positives = 79/217 (36%), Gaps = 42/217 (19%)

Query: 70  VPGSDYSGTVDAVGPNVSNFKVGDTV----------------------------CGFAAL 101
            PG +  G V   G +   F VGD V                             G+   
Sbjct: 59  TPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTD 118

Query: 102 GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 161
           G +A++     +  + +P G D +  A L  A    + AL+ RA L  G  L + G  G 
Sbjct: 119 GGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL-RASLPPGGRLGLYGFGGS 177

Query: 162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG 221
             + A Q+    GAT+  + RGA   +   +LG        +    P     L A     
Sbjct: 178 AHLTA-QVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTPPEP-----LDAA---- 227

Query: 222 VDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 258
             +L+ P GG L   +L+ L+ G  + V G    + P
Sbjct: 228 --ILFAPAGG-LVPPALEALDRGGVLAVAGIHLTDTP 261

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	347
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	100.0
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.78
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.75
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.53
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.48
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.42
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.75
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.64
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.46
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.44
PLN02494	477	adenosylhomocysteinase	98.26
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.24
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.13
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.07
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.06
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.01
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.01
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.0
PRK08324	681	short chain dehydrogenase; Validated	97.97
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.95
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.92
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.92
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.92
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.91
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.89
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.86
PRK05993	277	short chain dehydrogenase; Provisional	97.84
PRK06198	260	short chain dehydrogenase; Provisional	97.77
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.75
PRK05693	274	short chain dehydrogenase; Provisional	97.75
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.74
PRK06182	273	short chain dehydrogenase; Validated	97.71
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.67
PRK12742	237	oxidoreductase; Provisional	97.66
PRK06139	330	short chain dehydrogenase; Provisional	97.64
PLN03209	576	translocon at the inner envelope of chloroplast su	97.58
PRK08265	261	short chain dehydrogenase; Provisional	97.57
PRK07109	334	short chain dehydrogenase; Provisional	97.57
PRK08177	225	short chain dehydrogenase; Provisional	97.56
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.54
PRK06484	520	short chain dehydrogenase; Validated	97.52
PRK07806	248	short chain dehydrogenase; Provisional	97.5
PRK05872	296	short chain dehydrogenase; Provisional	97.48
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.46
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.44
PRK08339	263	short chain dehydrogenase; Provisional	97.44
PLN02780	320	ketoreductase/ oxidoreductase	97.41
PRK07060	245	short chain dehydrogenase; Provisional	97.41
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.39
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.39
PRK06128	300	oxidoreductase; Provisional	97.39
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.38
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.38
PRK05866	293	short chain dehydrogenase; Provisional	97.38
PRK06953	222	short chain dehydrogenase; Provisional	97.37
PRK08017	256	oxidoreductase; Provisional	97.37
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.35
PRK07904	253	short chain dehydrogenase; Provisional	97.35
PRK07814	263	short chain dehydrogenase; Provisional	97.34
PRK06196	315	oxidoreductase; Provisional	97.34
PRK06057	255	short chain dehydrogenase; Provisional	97.32
PRK07062	265	short chain dehydrogenase; Provisional	97.29
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.29
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.29
PRK07478	254	short chain dehydrogenase; Provisional	97.28
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.28
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.27
PRK07825	273	short chain dehydrogenase; Provisional	97.27
PRK07831	262	short chain dehydrogenase; Provisional	97.27
PRK12829	264	short chain dehydrogenase; Provisional	97.26
PRK06500	249	short chain dehydrogenase; Provisional	97.25
PRK09072	263	short chain dehydrogenase; Provisional	97.24
PRK06720	169	hypothetical protein; Provisional	97.24
PRK07576	264	short chain dehydrogenase; Provisional	97.24
PRK05867	253	short chain dehydrogenase; Provisional	97.24
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.23
PRK05854	313	short chain dehydrogenase; Provisional	97.23
PRK06949	258	short chain dehydrogenase; Provisional	97.22
PRK06194	287	hypothetical protein; Provisional	97.22
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.22
PRK08267	260	short chain dehydrogenase; Provisional	97.21
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.21
PRK12939	250	short chain dehydrogenase; Provisional	97.19
PRK07832	272	short chain dehydrogenase; Provisional	97.18
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.18
PRK08862	227	short chain dehydrogenase; Provisional	97.18
PRK06841	255	short chain dehydrogenase; Provisional	97.18
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.18
PRK07890	258	short chain dehydrogenase; Provisional	97.18
PRK06180	277	short chain dehydrogenase; Provisional	97.17
CHL00194	317	ycf39 Ycf39; Provisional	97.17
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.17
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.17
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.17
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.13
PRK06125	259	short chain dehydrogenase; Provisional	97.13
PRK09242	257	tropinone reductase; Provisional	97.12
PRK05876	275	short chain dehydrogenase; Provisional	97.12
PRK06181	263	short chain dehydrogenase; Provisional	97.11
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.11
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.11
PRK06197	306	short chain dehydrogenase; Provisional	97.11
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.11
PRK07677	252	short chain dehydrogenase; Provisional	97.1
PRK08303	305	short chain dehydrogenase; Provisional	97.1
KOG0725	270	consensus Reductases with broad range of substrate	97.1
PRK06114	254	short chain dehydrogenase; Provisional	97.1
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.09
PRK08643	256	acetoin reductase; Validated	97.09
PRK06101	240	short chain dehydrogenase; Provisional	97.09
PRK06172	253	short chain dehydrogenase; Provisional	97.08
PRK09186	256	flagellin modification protein A; Provisional	97.07
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.07
PRK09291	257	short chain dehydrogenase; Provisional	97.06
PRK07063	260	short chain dehydrogenase; Provisional	97.06
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.06
PRK12937	245	short chain dehydrogenase; Provisional	97.06
PRK06179	270	short chain dehydrogenase; Provisional	97.06
PRK08628	258	short chain dehydrogenase; Provisional	97.06
PRK07035	252	short chain dehydrogenase; Provisional	97.05
PRK08589	272	short chain dehydrogenase; Validated	97.05
PRK04148	134	hypothetical protein; Provisional	97.05
PRK12367	245	short chain dehydrogenase; Provisional	97.05
PRK12747	252	short chain dehydrogenase; Provisional	97.05
PRK07774	250	short chain dehydrogenase; Provisional	97.05
PRK05717	255	oxidoreductase; Validated	97.04
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.04
PRK10538	248	malonic semialdehyde reductase; Provisional	97.04
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.04
PRK07326	237	short chain dehydrogenase; Provisional	97.04
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.03
PRK12828	239	short chain dehydrogenase; Provisional	97.02
COG4122	219	Predicted O-methyltransferase [General function pr	97.02
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.01
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.01
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.01
PRK07856	252	short chain dehydrogenase; Provisional	97.01
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.01
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.99
PRK08251	248	short chain dehydrogenase; Provisional	96.99
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.98
TIGR00438	188	rrmJ cell division protein FtsJ.	96.97
COG2910	211	Putative NADH-flavin reductase [General function p	96.96
PRK07985	294	oxidoreductase; Provisional	96.96
PRK06138	252	short chain dehydrogenase; Provisional	96.96
PRK07454	241	short chain dehydrogenase; Provisional	96.96
PRK08703	239	short chain dehydrogenase; Provisional	96.96
PRK08264	238	short chain dehydrogenase; Validated	96.95
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.95
PRK06484	520	short chain dehydrogenase; Validated	96.95
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.94
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.94
PRK07791	286	short chain dehydrogenase; Provisional	96.93
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.93
PRK08278	273	short chain dehydrogenase; Provisional	96.92
PRK06482	276	short chain dehydrogenase; Provisional	96.92
PRK07067	257	sorbitol dehydrogenase; Provisional	96.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.91
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.9
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.9
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.9
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.9
PLN02476	278	O-methyltransferase	96.89
PRK07775	274	short chain dehydrogenase; Provisional	96.87
PRK08226	263	short chain dehydrogenase; Provisional	96.87
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.87
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.87
PRK08263	275	short chain dehydrogenase; Provisional	96.87
PRK12743	256	oxidoreductase; Provisional	96.87
PRK07024	257	short chain dehydrogenase; Provisional	96.87
PRK05650	270	short chain dehydrogenase; Provisional	96.87
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.87
PRK06483	236	dihydromonapterin reductase; Provisional	96.87
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.86
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.86
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.84
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.84
PRK05875	276	short chain dehydrogenase; Provisional	96.84
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.83
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	96.83
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.82
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.82
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.82
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.81
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.81
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.81
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.8
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.77
PRK06914	280	short chain dehydrogenase; Provisional	96.75
PLN02253	280	xanthoxin dehydrogenase	96.75
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.75
PRK05884	223	short chain dehydrogenase; Provisional	96.75
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.71
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.71
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.69
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.69
PRK07102	243	short chain dehydrogenase; Provisional	96.68
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.68
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.67
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.67
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.67
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.67
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.66
KOG1208	314	consensus Dehydrogenases with different specificit	96.66
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.66
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.65
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.65
PRK07577	234	short chain dehydrogenase; Provisional	96.65
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.64
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.64
PRK06523	260	short chain dehydrogenase; Provisional	96.64
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.63
PRK06701	290	short chain dehydrogenase; Provisional	96.63
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.62
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.62
PRK07074	257	short chain dehydrogenase; Provisional	96.61
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.59
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.58
PRK08219	227	short chain dehydrogenase; Provisional	96.58
PRK06398	258	aldose dehydrogenase; Validated	96.58
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.57
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.54
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.52
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.52
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.5
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.5
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.49
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	96.48
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.46
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.46
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.42
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.42
PRK05855	582	short chain dehydrogenase; Validated	96.4
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.4
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.39
PLN03139	386	formate dehydrogenase; Provisional	96.38
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.38
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.38
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.38
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.37
PRK07023	243	short chain dehydrogenase; Provisional	96.37
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.37
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.36
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.34
PRK12746	254	short chain dehydrogenase; Provisional	96.34
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.34
PRK07417	279	arogenate dehydrogenase; Reviewed	96.34
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.32
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.31
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.3
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.29
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.28
PRK09134	258	short chain dehydrogenase; Provisional	96.27
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.26
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.25
PRK12744	257	short chain dehydrogenase; Provisional	96.22
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.22
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.2
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.2
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.2
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.19
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.19
PRK05599	246	hypothetical protein; Provisional	96.18
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.18
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.17
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.17
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.16
PRK07201	657	short chain dehydrogenase; Provisional	96.16
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.15
PRK07402	196	precorrin-6B methylase; Provisional	96.14
PRK14967	223	putative methyltransferase; Provisional	96.14
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.14
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.13
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.13
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.12
PRK07574	385	formate dehydrogenase; Provisional	96.12
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.11
PRK09135	249	pteridine reductase; Provisional	96.09
PRK12827	249	short chain dehydrogenase; Provisional	96.09
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.09
PRK06940	275	short chain dehydrogenase; Provisional	96.08
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.07
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.06
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.06
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.03
PRK08618	325	ornithine cyclodeaminase; Validated	96.03
PRK08655	437	prephenate dehydrogenase; Provisional	96.01
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.01
PRK06123	248	short chain dehydrogenase; Provisional	95.99
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.99
PRK11207	197	tellurite resistance protein TehB; Provisional	95.97
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.96
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.95
PLN02653	340	GDP-mannose 4,6-dehydratase	95.94
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.94
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.93
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.92
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.92
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.9
PRK07041	230	short chain dehydrogenase; Provisional	95.9
PRK07069	251	short chain dehydrogenase; Validated	95.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.89
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.85
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.85
PRK13243	333	glyoxylate reductase; Reviewed	95.84
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.84
PRK14982	340	acyl-ACP reductase; Provisional	95.82
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.81
PRK08317	241	hypothetical protein; Provisional	95.81
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.79
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.78
PLN00015	308	protochlorophyllide reductase	95.78
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	95.76
PLN02214	342	cinnamoyl-CoA reductase	95.75
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.71
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.71
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.71
COG1028	251	FabG Dehydrogenases with different specificities (	95.7
PLN02244	340	tocopherol O-methyltransferase	95.69
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.68
PLN00016	378	RNA-binding protein; Provisional	95.67
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.66
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.66
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.66
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.65
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.63
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.63
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.62
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.61
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.6
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.6
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.59
KOG1663	237	consensus O-methyltransferase [Secondary metabolit	95.59
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.59
PLN03075	296	nicotianamine synthase; Provisional	95.59
PLN02366	308	spermidine synthase	95.59
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.57
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.55
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.55
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.53
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.5
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.5
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.48
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.47
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.47
PLN00203	519	glutamyl-tRNA reductase	95.47
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.41
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	95.39
PRK12320	699	hypothetical protein; Provisional	95.38
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.38
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.38
PRK06924	251	short chain dehydrogenase; Provisional	95.36
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.36
PRK07340	304	ornithine cyclodeaminase; Validated	95.35
PLN02240	352	UDP-glucose 4-epimerase	95.33
PRK10637	457	cysG siroheme synthase; Provisional	95.33
PLN02686	367	cinnamoyl-CoA reductase	95.33
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.32
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	95.29
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.29
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.28
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	95.28
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
PRK08309	177	short chain dehydrogenase; Provisional	95.26
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.23
PRK10669	558	putative cation:proton antiport protein; Provision	95.23
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.19
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.19
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.18
PRK07578	199	short chain dehydrogenase; Provisional	95.17
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	95.15

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.4e-60  Score=407.32  Aligned_cols=306  Identities=34%  Similarity=0.551  Sum_probs=280.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++++|           +.+++++.|+ |+|+||+|+|.|+|+|++|++.+.|..+... +|+++|||.+|+|+
T Consensus         4 mkA~~~~~~~~p-----------l~i~e~~~p~-p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~   70 (339)
T COG1064           4 MKAAVLKKFGQP-----------LEIEEVPVPE-PGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVV   70 (339)
T ss_pred             eEEEEEccCCCC-----------ceEEeccCCC-CCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEE
Confidence            899999999987           5557899999 7999999999999999999999999998654 99999999999999


Q ss_pred             EeCCCCCCCCCCCEEE----------------------------EecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVC----------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~----------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++|++|++||||.                            ++..+|+|+||+++++++++++|+++++++||.+.|
T Consensus        71 ~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllC  150 (339)
T COG1064          71 EVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLC  150 (339)
T ss_pred             EecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhc
Confidence            9999999999999992                            455579999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.|.|++| +..++.||++|+|+|. |++|++++|+|+++|++|++++++++|.+.++++|++++++.++.+.   .+.
T Consensus       151 aGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~---~~~  225 (339)
T COG1064         151 AGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDA---LEA  225 (339)
T ss_pred             CeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchh---hHH
Confidence            999999999 4599999999999999 89999999999999999999999999999999999999999886655   333


Q ss_pred             HHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC-CCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS-GEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      +.+     .+|+++||++...++.++++|+++|+++++|.+. ......+...++.+++++.|+..++         +.+
T Consensus       226 ~~~-----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---------~~d  291 (339)
T COG1064         226 VKE-----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---------RAD  291 (339)
T ss_pred             hHh-----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---------HHH
Confidence            332     2999999999777899999999999999999985 5555577778899999999999888         689


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +++++++..+|++++.+.+.++++++++||+.|.+++..|+.||.+.
T Consensus       292 ~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         292 LEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            99999999999999998889999999999999999999999999874

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=9.5e-56  Score=389.89  Aligned_cols=321  Identities=39%  Similarity=0.557  Sum_probs=285.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++..++.|+.         +..+|+|.|. |+++||+|||.++++|+.|...+.|.......+|+++|.|++|+|+
T Consensus         1 mka~~~~~~g~~~~---------l~~~e~~~P~-p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~   70 (326)
T COG0604           1 MKAVVVEEFGGPEV---------LKVVEVPEPE-PGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVV   70 (326)
T ss_pred             CeEEEEeccCCCce---------eEEEecCCCC-CCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEE
Confidence            99999999999864         6667999999 6999999999999999999999998744445689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049           81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      ++|++|++|++||||+...   .+|+|+||++++++.++++|+++|+++||+++..++|||+++....++++|++|||+|
T Consensus        71 avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~g  150 (326)
T COG0604          71 AVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHG  150 (326)
T ss_pred             EeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence            9999999999999999986   6799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHH
Q 019049          158 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  237 (347)
Q Consensus       158 ~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  237 (347)
                      |+|++|.+++|+|+++|+++++++.++++.++++++|+++++++.+.++   .+.+.+.+++.++|+|+|++|++.+..+
T Consensus       151 aaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~---~~~v~~~t~g~gvDvv~D~vG~~~~~~~  227 (326)
T COG0604         151 AAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDF---VEQVRELTGGKGVDVVLDTVGGDTFAAS  227 (326)
T ss_pred             CCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccH---HHHHHHHcCCCCceEEEECCCHHHHHHH
Confidence            9999999999999999988888888888888999999999999999888   7888889998899999999999999999


Q ss_pred             HhccccCCEEEEEeecCC-CCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhh
Q 019049          238 LKLLNWGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  316 (347)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~  316 (347)
                      +.+|+++|+++.+|..++ .....+...++.+++...+......   +++...+.++++.+++.+|.+++.+..+|++++
T Consensus       228 l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e  304 (326)
T COG0604         228 LAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DPEALAEALAELFDLLASGKLKPVIDRVYPLAE  304 (326)
T ss_pred             HHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---chHHHHHHHHHHHHHHHcCCCcceeccEechhh
Confidence            999999999999998874 3333445556777888888775543   335667889999999999999999999999999


Q ss_pred             HHHHHHHHHc-CCcceeEEEEe
Q 019049          317 ANLAFSAIED-RKVIGKVMIAF  337 (347)
Q Consensus       317 ~~~a~~~~~~-~~~~gk~vv~~  337 (347)
                      ..++...... ++..||+|+++
T Consensus       305 ~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         305 APAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             hHHHHHHHHcccCCcceEEEeC
Confidence            6555554444 58899999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=7.1e-54  Score=343.55  Aligned_cols=325  Identities=32%  Similarity=0.444  Sum_probs=302.7

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      |-+++++.|++++         +.+++.|.|. |.|+|++|+-.|+|+|..|.....|-+. +.+.|.+||.|.+|+|+.
T Consensus        10 k~i~v~e~Ggydv---------lk~ed~pv~~-papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvA   78 (336)
T KOG1197|consen   10 KCIVVTEFGGYDV---------LKLEDRPVPP-PAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVA   78 (336)
T ss_pred             eEEEEeccCCcce---------EEEeeecCCC-CCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEE
Confidence            5678899999876         8889999999 7999999999999999999999999885 567899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  161 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~  161 (347)
                      +|++++++++||||.-..+.|.|+++..+|...+.++|+.+++++||++...++|||.-+++..++++|++||+|.++|+
T Consensus        79 vG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGG  158 (336)
T KOG1197|consen   79 VGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGG  158 (336)
T ss_pred             ecCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccc
Confidence            99999999999999999899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhcc
Q 019049          162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  241 (347)
Q Consensus       162 ~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  241 (347)
                      +|++++|+++..|++++++.++.+|++.+++.|+.+.++++.+++   ..++.++|++.|+|+++|.+|.+.+..++.+|
T Consensus       159 VGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~---v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L  235 (336)
T KOG1197|consen  159 VGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDY---VDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL  235 (336)
T ss_pred             HHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhH---HHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence            999999999999999999999999999999999999999999999   88899999999999999999999999999999


Q ss_pred             ccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHH
Q 019049          242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF  321 (347)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~  321 (347)
                      ++.|.+|.+|..++..+.++++++..+.+++.-.++..+. ..+..+.....+++.++.+|.+++.+.++|||++..+|+
T Consensus       236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi-~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~  314 (336)
T KOG1197|consen  236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYI-DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH  314 (336)
T ss_pred             ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhccc-CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence            9999999999999988889999998898888765444432 344556678889999999999999999999999999999


Q ss_pred             HHHHcCCcceeEEEEeCCCC
Q 019049          322 SAIEDRKVIGKVMIAFDDMK  341 (347)
Q Consensus       322 ~~~~~~~~~gk~vv~~~~~~  341 (347)
                      ..+++++..||+++.+.++.
T Consensus       315 ~diesrktvGkvlLlp~~~~  334 (336)
T KOG1197|consen  315 ADIESRKTVGKVLLLPGPEK  334 (336)
T ss_pred             HHHHhhhccceEEEeCCccc
Confidence            99999999999999987764

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.9e-51  Score=338.94  Aligned_cols=313  Identities=25%  Similarity=0.350  Sum_probs=267.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC--CCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK--PPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~--~~~p~~~G~e~~G~   78 (347)
                      |+|+++.+++..           .+ ++.|.|++++|+||+|++.+.|||++|+|.+.......  ...|.++|||.+|+
T Consensus         5 ~~A~vl~g~~di-----------~i-~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGi   72 (354)
T KOG0024|consen    5 NLALVLRGKGDI-----------RI-EQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGI   72 (354)
T ss_pred             cceeEEEccCce-----------eE-eeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccc
Confidence            789999999985           33 58999998899999999999999999999997665432  24699999999999


Q ss_pred             EEEeCCCCCCCCCCCEEE------------------------Eec----CCCcceeeEeeeCCCeeeCCCCCCHHHHccC
Q 019049           79 VDAVGPNVSNFKVGDTVC------------------------GFA----ALGSFAQFIVADQSELFPVPKGCDLLAAAAL  130 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~------------------------~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  130 (347)
                      |.++|++|++|++||||.                        .|+    .+|++++|++.+++.|+|+|+++|++++|.+
T Consensus        73 V~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~  152 (354)
T KOG0024|consen   73 VEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALI  152 (354)
T ss_pred             hhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccc
Confidence            999999999999999993                        111    2499999999999999999999999999966


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049          131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  209 (347)
Q Consensus       131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (347)
                       .+++.+|||. +.+++++|++|||+|+ |++|+++...|+.+|| +|++++..+.|++.++++|++.+.+.......+.
T Consensus       153 -ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~  229 (354)
T KOG0024|consen  153 -EPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQE  229 (354)
T ss_pred             -cchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHH
Confidence             7899999998 7899999999999999 9999999999999999 8999999999999999999999888776553222


Q ss_pred             HHHHHHH-hcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchh
Q 019049          210 VKEFLKA-RKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV  287 (347)
Q Consensus       210 ~~~~~~~-~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (347)
                      ..+..+. .+...+|+.|||+|. ..++.++..++.+|++++++...... .+|......+++.+.|++.+.        
T Consensus       230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~-~fpi~~v~~kE~~~~g~fry~--------  300 (354)
T KOG0024|consen  230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEI-QFPIIDVALKEVDLRGSFRYC--------  300 (354)
T ss_pred             HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCcc-ccChhhhhhheeeeeeeeeec--------
Confidence            3333333 333569999999998 45688999999999988887665443 478888999999999988544        


Q ss_pred             HHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcc-eeEEEEeC
Q 019049          288 LEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI-GKVMIAFD  338 (347)
Q Consensus       288 ~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~-gk~vv~~~  338 (347)
                       ...+...++++++|+++.  .+++.|++++..+||+.+..++.. =|+++..+
T Consensus       301 -~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  301 -NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             -cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence             358899999999999995  699999999999999999887742 37877654

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=9.7e-51  Score=341.11  Aligned_cols=309  Identities=27%  Similarity=0.389  Sum_probs=272.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++.+++++|           +.++++.++. |++|||+||+.++|+|++|.....|..+.  .+|.++|||.+|+|+
T Consensus         3 ~~aAV~~~~~~P-----------l~i~ei~l~~-P~~gEVlVri~AtGVCHTD~~~~~G~~p~--~~P~vLGHEgAGiVe   68 (366)
T COG1062           3 TRAAVAREAGKP-----------LEIEEVDLDP-PRAGEVLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVE   68 (366)
T ss_pred             ceEeeeecCCCC-----------eEEEEEecCC-CCCCeEEEEEEEeeccccchhhhcCCCCC--CCceecccccccEEE
Confidence            689999999998           6667899999 79999999999999999999999998875  389999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe--------------------------------------c----------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGF--------------------------------------A----------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~--------------------------------------~----------~~g~~~~~~~~~~  112 (347)
                      +||++|+.+++||+|+..                                      .          ..++|++|.++++
T Consensus        69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~  148 (366)
T COG1062          69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE  148 (366)
T ss_pred             EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence            999999999999999411                                      0          0159999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      ..++|++++.+++.++.+.|..+|.+.+....+++++|++|.|.|. |++|++++|-|+..|+ ++++++.+++|+++++
T Consensus       149 ~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~  227 (366)
T COG1062         149 ISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK  227 (366)
T ss_pred             cceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC-CCcchhHhhhc
Q 019049          192 SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVK  268 (347)
Q Consensus       192 ~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~  268 (347)
                      ++|+.+++|.++. +.   .+.+.+.|++ ++|++|||+|. ..+++++.++.++|+.+.+|...... .+.+...+...
T Consensus       228 ~fGAT~~vn~~~~~~v---v~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g  303 (366)
T COG1062         228 KFGATHFVNPKEVDDV---VEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG  303 (366)
T ss_pred             hcCCceeecchhhhhH---HHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence            9999999998876 35   6666777764 99999999998 77899999999999999999876432 22444445555


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                       .++.|++++....      +.++.+++++..+|+++.  .+++.++|+|++|||+.|.+++.. |.||.
T Consensus       304 -r~~~Gs~~G~~~p------~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         304 -RVWKGSAFGGARP------RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             -ceEEEEeecCCcc------ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence             9999999886432      368899999999999996  499999999999999999999988 55544

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7e-50  Score=332.06  Aligned_cols=310  Identities=25%  Similarity=0.368  Sum_probs=266.2

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ++|.+..+++...         ....+++.|+ |+++||+|++.|+|+|++|++.+.|..+. ..+|.++|||.+|+|++
T Consensus        11 ~g~~~~~~~G~l~---------p~~~~~~~~~-~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~Vvk   79 (360)
T KOG0023|consen   11 FGWAARDPSGVLS---------PEVFSFPVRE-PGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVK   79 (360)
T ss_pred             EEEEEECCCCCCC---------cceeEcCCCC-CCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEE
Confidence            4677777776421         2225788899 79999999999999999999999999887 67999999999999999


Q ss_pred             eCCCCCCCCCCCEE------------------------------EEecCC-----CcceeeEeeeCCCeeeCCCCCCHHH
Q 019049           82 VGPNVSNFKVGDTV------------------------------CGFAAL-----GSFAQFIVADQSELFPVPKGCDLLA  126 (347)
Q Consensus        82 vG~~v~~~~~Gd~V------------------------------~~~~~~-----g~~~~~~~~~~~~~~~~p~~~~~~~  126 (347)
                      +|++|++|++||||                              .++..+     |+|++|+++++.++++||+++++++
T Consensus        80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~  159 (360)
T KOG0023|consen   80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS  159 (360)
T ss_pred             ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence            99999999999999                              122223     5699999999999999999999999


Q ss_pred             HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHhcCCcEEEeCC-CC
Q 019049          127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLS-NE  204 (347)
Q Consensus       127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~~~g~~~v~~~~-~~  204 (347)
                      ||.+.|+..|+|.+| ...++.||+++.|.|+ |++|.+++|+|+++|.+|++++++. .|.+.++.+||+..++.. +.
T Consensus       160 aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~  237 (360)
T KOG0023|consen  160 AAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP  237 (360)
T ss_pred             ccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence            999999999999999 6788899999999999 6699999999999999999999988 455666789999999987 55


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  284 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      +.   .+++...++ .++|-+.+. ....+..++.+++++|++|++|.+.... .++...+..+.+++.|+..++     
T Consensus       238 d~---~~~~~~~~d-g~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~~~-~~~~~~lil~~~~I~GS~vG~-----  306 (360)
T KOG0023|consen  238 DI---MKAIMKTTD-GGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEKPL-KLDTFPLILGRKSIKGSIVGS-----  306 (360)
T ss_pred             HH---HHHHHHhhc-Ccceeeeec-cccchHHHHHHhhcCCEEEEEeCcCCcc-cccchhhhcccEEEEeecccc-----
Confidence            55   666666554 355666555 4467889999999999999999988743 356667788999999999988     


Q ss_pred             chhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCC
Q 019049          285 PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       285 ~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                          +...++.+++.+++.++..+ ...+++++++||++|.+++..++.|+.++.+
T Consensus       307 ----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~~  357 (360)
T KOG0023|consen  307 ----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVSKS  357 (360)
T ss_pred             ----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEcccc
Confidence                68889999999999999776 4789999999999999999999999998654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=4.6e-48  Score=351.22  Aligned_cols=318  Identities=25%  Similarity=0.388  Sum_probs=268.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.+.- +.. +.. +.++++|.|+ |+++||+|||.++++|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         1 mka~~~~~~g~~~~-~~~-~~~-l~~~~~~~P~-~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~GhE~~G~V~   74 (371)
T cd08281           1 MRAAVLRETGAPTP-YAD-SRP-LVIEEVELDP-PGPGEVLVKIAAAGLCHSDLSVINGDRP--RPLPMALGHEAAGVVV   74 (371)
T ss_pred             CcceEEEecccccc-ccc-CCC-ceEEEeecCC-CCCCeEEEEEEEEeeCccchHhhcCCCC--CCCCccCCccceeEEE
Confidence            99999999886410 000 011 4456899999 5999999999999999999999988653  3468999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|++++++++||+|+...                                                ..|+|++|+++++
T Consensus        75 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~  154 (371)
T cd08281          75 EVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSR  154 (371)
T ss_pred             EeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecc
Confidence            9999999999999997531                                                0268999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++|+.+++++.+||+++...+++++|++|||.|+ |++|++++|+|+..|+ +|++++.+++|++.++
T Consensus       155 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~  233 (371)
T cd08281         155 RSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR  233 (371)
T ss_pred             cceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence            9999999999999999999999999999878889999999999997 9999999999999999 6999999999999999


Q ss_pred             hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcc
Q 019049          192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKN  269 (347)
Q Consensus       192 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~  269 (347)
                      ++|+++++++.+.++   .+.+.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.++
T Consensus       234 ~~Ga~~~i~~~~~~~---~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  309 (371)
T cd08281         234 ELGATATVNAGDPNA---VEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE  309 (371)
T ss_pred             HcCCceEeCCCchhH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence            999999999877666   5566666665 89999999987 5778899999999999999876432 2234555678899


Q ss_pred             eEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      +++.+++...+.      ..+.++++++++.+|++++  .++++|+|+|+++||+.+.+++..||+|+
T Consensus       310 ~~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         310 RTLKGSYMGSCV------PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             CEEEEEecCCCC------hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            999998765432      1356788999999999985  48899999999999999999998888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-48  Score=318.24  Aligned_cols=313  Identities=23%  Similarity=0.361  Sum_probs=270.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++.+++++|           +.+|++.++. |+.+||+|++.++++|++|...+.|..+ ...+|.++|||.+|+|+
T Consensus         8 CKAAV~w~a~~P-----------L~IEei~V~p-Pka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVE   74 (375)
T KOG0022|consen    8 CKAAVAWEAGKP-----------LVIEEIEVAP-PKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVE   74 (375)
T ss_pred             EeEeeeccCCCC-----------eeEEEEEeCC-CCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEE
Confidence            689999999999           8889999888 7999999999999999999999998763 34689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCcceeeEeee
Q 019049           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (347)
                      ++|.+|+++++||+|+...                                                 ...+|+||.+++
T Consensus        75 SvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~  154 (375)
T KOG0022|consen   75 SVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVD  154 (375)
T ss_pred             EecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEee
Confidence            9999999999999994110                                                 015999999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      ...+++|++..+++.++.+.+...|+|.|....++++||+++.|+|- |++|+++++-|+..|| +++.++-+++|.+.+
T Consensus       155 ~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a  233 (375)
T KOG0022|consen  155 DISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKA  233 (375)
T ss_pred             cceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999 9999999999999999 999999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchhHhhhc
Q 019049          191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVK  268 (347)
Q Consensus       191 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  268 (347)
                      +++|+.+++|..+..- ...+.+.+.|+ +++|+.|||+|. ..+.+++.+...+ |+-+.+|..............+..
T Consensus       234 k~fGaTe~iNp~d~~~-~i~evi~EmTd-gGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~  311 (375)
T KOG0022|consen  234 KEFGATEFINPKDLKK-PIQEVIIEMTD-GGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT  311 (375)
T ss_pred             HhcCcceecChhhccc-cHHHHHHHHhc-CCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc
Confidence            9999999998773221 23555666675 799999999998 6778999999988 999999987654332122223455


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.++.|+.++.|..      ++++..+++...+++++.  .+++.++|+++++||+.|.+++.. +.|+.
T Consensus       312 GR~~~Gs~FGG~K~------~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  312 GRTWKGSAFGGFKS------KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             ccEEEEEecccccc------hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            88899998888643      578899999999999986  499999999999999999999988 66654

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=8e-47  Score=339.64  Aligned_cols=307  Identities=25%  Similarity=0.396  Sum_probs=261.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.            +.+++++.|. |+++||+|++.++++|++|++.+.+.+.....+|.++|||++|+|+
T Consensus         1 mka~~~~~~~~------------l~~~~~~~p~-~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~   67 (339)
T cd08239           1 MRGAVFPGDRT------------VELREFPVPV-PGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVV   67 (339)
T ss_pred             CeEEEEecCCc------------eEEEecCCCC-CCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEE
Confidence            99999987654            3346899999 5999999999999999999998877643323458899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++++++++||+|+.+.                            .+|+|++|++++.+.++++|+++++++|+.+++
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~  147 (339)
T cd08239          68 AVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLC  147 (339)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcc
Confidence            9999999999999997542                            258999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  211 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  211 (347)
                      ++.|||+++ ..+++.+|++|||+|+ |++|++++|+|+.+|++ |++++++++|++.++++|+++++++.+.+    .+
T Consensus       148 ~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~----~~  221 (339)
T cd08239         148 GIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD----VQ  221 (339)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch----HH
Confidence            999999998 5678899999999987 99999999999999998 99999999999999999999999876543    34


Q ss_pred             HHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          212 EFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      .+.+.+.+.++|++|||+|+.. +..++++++++|+++.+|..... .......++.+++++.+++...         .+
T Consensus       222 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~  291 (339)
T cd08239         222 EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFS---------VP  291 (339)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCC---------HH
Confidence            4556666678999999999864 47889999999999999875432 2122345678899999887544         36


Q ss_pred             HHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          291 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++++++++.+|.+++  .++++|+++++++||+.+.++. .||+|++|
T Consensus       292 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         292 DMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            7889999999999874  5889999999999999998875 68999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=9.7e-47  Score=341.05  Aligned_cols=311  Identities=23%  Similarity=0.355  Sum_probs=267.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|++           ..++++|.|. |+++||+|||.++++|++|++.+.|..+  ..+|.++|||++|+|+
T Consensus         2 mka~~~~~~~~~-----------~~~~~~~~p~-~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~G~e~~G~V~   67 (358)
T TIGR03451         2 VRGVIARSKGAP-----------VELETIVVPD-PGPGEVIVDIQACGVCHTDLHYREGGIN--DEFPFLLGHEAAGVVE   67 (358)
T ss_pred             cEEEEEccCCCC-----------CEEEEEECCC-CCCCeEEEEEEEEeecHHHHHHhcCCcc--ccCCcccccceEEEEE
Confidence            999999999976           4457899999 5999999999999999999999888653  3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------------------cCCCcceeeEeeeCCCeeeCCC
Q 019049           81 AVGPNVSNFKVGDTVCGF----------------------------------------AALGSFAQFIVADQSELFPVPK  120 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~----------------------------------------~~~g~~~~~~~~~~~~~~~~p~  120 (347)
                      ++|+++++|++||+|+..                                        ...|+|+||+.+++..++++|+
T Consensus        68 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~  147 (358)
T TIGR03451        68 AVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDP  147 (358)
T ss_pred             EeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCC
Confidence            999999999999999751                                        0248999999999999999999


Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEE
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV  199 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~  199 (347)
                      ++++++|+.+++.+.++|+++...+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++.++++|+++++
T Consensus       148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i  226 (358)
T TIGR03451       148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV  226 (358)
T ss_pred             CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence            99999999999999999998877889999999999986 9999999999999999 599999999999999999999999


Q ss_pred             eCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC-CCcchhHhhhcceEEEEEEe
Q 019049          200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVKNWTVHGLYW  277 (347)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  277 (347)
                      ++.+.++   .+.+.+.+++.++|++|||+|+ ..+..++++++++|+++.+|...... ..++...++.+++++.+++.
T Consensus       227 ~~~~~~~---~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~  303 (358)
T TIGR03451       227 NSSGTDP---VEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY  303 (358)
T ss_pred             cCCCcCH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence            9877666   5667777777789999999997 56788999999999999999765321 23454567788999988764


Q ss_pred             ccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          278 GSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      ....   +   .+.++++++++.+|++++  .++++|+++|+++||+.+.+++.. |+++.
T Consensus       304 ~~~~---~---~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       304 GDCL---P---ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             CCCC---c---HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            3211   1   366888999999999985  488999999999999999988776 76664

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.2e-46  Score=334.62  Aligned_cols=317  Identities=24%  Similarity=0.369  Sum_probs=268.9

Q ss_pred             CceEEecccCCC---CccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeE
Q 019049            1 MEALVCRKLGDP---TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG   77 (347)
Q Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G   77 (347)
                      |||+++.++|.|   +.         ..++++|.|. |+++||+|++.++++|++|++...|.++....+|.++|||++|
T Consensus         1 m~a~~~~~~~~~~~~~~---------~~~~~~~~p~-~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G   70 (324)
T cd08291           1 MKALLLEEYGKPLEVKE---------LSLPEPEVPE-PGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSG   70 (324)
T ss_pred             CeEEEEeecCCCccccE---------EEecccCCCC-CCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEE
Confidence            999999998865   22         4456889999 5999999999999999999999988765444578899999999


Q ss_pred             EEEEeCCCCCC-CCCCCEEEEecC-CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           78 TVDAVGPNVSN-FKVGDTVCGFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        78 ~V~~vG~~v~~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      +|+++|+++.+ |++||+|+++.. +|+|++|++++++.++++|+++++++++.++..+.|||..+ ....+ ++++++|
T Consensus        71 ~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv  148 (324)
T cd08291          71 TVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVV  148 (324)
T ss_pred             EEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEE
Confidence            99999999996 999999998764 39999999999999999999999999998888899998544 55555 5556666


Q ss_pred             e-cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049          156 L-GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  234 (347)
Q Consensus       156 ~-g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  234 (347)
                      + +++|++|++++|+|+.+|++|+++++++++++.++++|+++++++...++   .+.+.+.+.+.++|++|||+|+...
T Consensus       149 ~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~v~~~~~~~~~d~vid~~g~~~~  225 (324)
T cd08291         149 HTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDF---LEDLKELIAKLNATIFFDAVGGGLT  225 (324)
T ss_pred             EccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccH---HHHHHHHhCCCCCcEEEECCCcHHH
Confidence            6 78899999999999999999999999999999999999999999887776   5667777777789999999999888


Q ss_pred             HHHHhccccCCEEEEEeecCCCCC-CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeC
Q 019049          235 KESLKLLNWGAQILVIGFASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYS  313 (347)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~  313 (347)
                      ...+++++++|+++.+|....... ..+...++.+++++.+++...+....   ..+.++++++++. +.+++.++++|+
T Consensus       226 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~i~~~~~  301 (324)
T cd08291         226 GQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL---GPEVVKKLKKLVK-TELKTTFASRYP  301 (324)
T ss_pred             HHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc---CHHHHHHHHHHHh-CccccceeeEEc
Confidence            888999999999999987654322 24445667889999998876543221   2467888888888 999988999999


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEE
Q 019049          314 PSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       314 ~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      |+|+++||+.+.++...||+++.
T Consensus       302 l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         302 LALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHHHHHHHhCCCCCeEEeC
Confidence            99999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.4e-46  Score=339.10  Aligned_cols=312  Identities=21%  Similarity=0.351  Sum_probs=261.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           +.+++++.|. |+++||+|+|.++|+|++|++.+.|..+....+|.++|||++|+|+
T Consensus        11 mka~~~~~~~~~-----------~~~~e~~~P~-~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~   78 (381)
T PLN02740         11 CKAAVAWGPGEP-----------LVMEEIRVDP-PQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVE   78 (381)
T ss_pred             eEEEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEE
Confidence            899999888764           3346899999 5999999999999999999999988765444678999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------------------------------CCCcceeeEe
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------------------------------ALGSFAQFIV  109 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------------------------------~~g~~~~~~~  109 (347)
                      ++|+++++|++||||+...                                                   .+|+|+||++
T Consensus        79 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~  158 (381)
T PLN02740         79 SVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTV  158 (381)
T ss_pred             EeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEE
Confidence            9999999999999997531                                                   1489999999


Q ss_pred             eeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHH
Q 019049          110 ADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK  188 (347)
Q Consensus       110 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~  188 (347)
                      ++.+.++++|+++++++++.+++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++
T Consensus       159 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~  237 (381)
T PLN02740        159 LDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE  237 (381)
T ss_pred             EehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence            9999999999999999999999999999998877889999999999997 9999999999999999 6999999999999


Q ss_pred             HHHhcCCcEEEeCCCCC--chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCC-CCcchh
Q 019049          189 FLKSLGVDHVVDLSNES--VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPAN  263 (347)
Q Consensus       189 ~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~  263 (347)
                      .++++|++++++..+.+  +   .+.+.+.+.+ ++|++||++|. ..+..++.+++++ |+++.+|...... ..++..
T Consensus       238 ~a~~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~  313 (381)
T PLN02740        238 KGKEMGITDFINPKDSDKPV---HERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPM  313 (381)
T ss_pred             HHHHcCCcEEEecccccchH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHH
Confidence            99999999999876532  4   4455556655 89999999997 5678899999996 9999999765321 112222


Q ss_pred             HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          264 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      . +.++.++.|+..+.+..      ...+.++++++.+|.+++  .++++|+|+|+++|++.+.+++.. |++|++
T Consensus       314 ~-~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~~  381 (381)
T PLN02740        314 E-LFDGRSITGSVFGDFKG------KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLHL  381 (381)
T ss_pred             H-HhcCCeEEEEecCCCCc------HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEeC
Confidence            2 34688898887654321      246788999999999875  588999999999999999888764 888863

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.3e-45  Score=335.04  Aligned_cols=310  Identities=23%  Similarity=0.316  Sum_probs=260.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++++.           +.++++|.|. |+++||+|||.++++|++|++.+.+..    .+|.++|||++|+|+
T Consensus        13 mka~~~~~~~~~-----------~~~~e~~~P~-~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~   76 (378)
T PLN02827         13 CRAAVAWGAGEA-----------LVMEEVEVSP-PQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVE   76 (378)
T ss_pred             eEEEEEecCCCC-----------ceEEEeecCC-CCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEE
Confidence            899999876643           4456899999 599999999999999999999887642    457899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC------------------------------------------------CCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFAA------------------------------------------------LGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~  112 (347)
                      ++|+++++|++||+|+....                                                .|+|++|+.+++
T Consensus        77 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~  156 (378)
T PLN02827         77 SIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS  156 (378)
T ss_pred             EcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence            99999999999999986521                                                279999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++++.+++++.++|+++...+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.+++|.+.++
T Consensus       157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~  235 (378)
T PLN02827        157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK  235 (378)
T ss_pred             hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            9999999999999999998899999988777788999999999997 9999999999999999 5888888999999999


Q ss_pred             hcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccC-CEEEEEeecCCCCCCcchhHhhh
Q 019049          192 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWG-AQILVIGFASGEIPVIPANIALV  267 (347)
Q Consensus       192 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~  267 (347)
                      ++|+++++++.+.  ++   .+.+.+.+.+ ++|++|||+|.+ .+..++++++++ |+++.+|.............++.
T Consensus       236 ~lGa~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~  311 (378)
T PLN02827        236 TFGVTDFINPNDLSEPI---QQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL  311 (378)
T ss_pred             HcCCcEEEcccccchHH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence            9999999987652  33   3445555654 899999999985 688899999998 99999997654322122234677


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +++++.|+....+..      ...++++++++.+|++++  .++++|+|+++++||+.+.+++. +|+||.+.
T Consensus       312 ~~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        312 SGRTLKGSLFGGWKP------KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             cCceEEeeecCCCch------hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            999999987654321      356788999999999997  68999999999999999998887 59999774

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=4.1e-45  Score=331.18  Aligned_cols=311  Identities=23%  Similarity=0.351  Sum_probs=255.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..+++.           ..++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         2 ~~a~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~   68 (368)
T TIGR02818         2 SRAAVAWAAGQP-----------LKIEEVDVEM-PQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVE   68 (368)
T ss_pred             ceEEEEecCCCC-----------eEEEEecCCC-CCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEE
Confidence            899999887764           4446889999 59999999999999999999999887643 3568999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|+++++|++||||+...                                                ..|+|+||+++++
T Consensus        69 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  148 (368)
T TIGR02818        69 AVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPE  148 (368)
T ss_pred             EECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEech
Confidence            9999999999999997531                                                0268999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++++.+++++.+||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.+++|++.++
T Consensus       149 ~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~  227 (368)
T TIGR02818       149 ISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK  227 (368)
T ss_pred             hheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            9999999999999999999999999999878889999999999987 9999999999999999 7999999999999999


Q ss_pred             hcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCC-CCcchhHhh
Q 019049          192 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPANIAL  266 (347)
Q Consensus       192 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~  266 (347)
                      ++|+++++++.+.  ++   .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|...... .......++
T Consensus       228 ~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~  303 (368)
T TIGR02818       228 KLGATDCVNPNDYDKPI---QEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV  303 (368)
T ss_pred             HhCCCeEEcccccchhH---HHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh
Confidence            9999999987642  23   3445566665 89999999997 5678899999886 9999999764221 112222222


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                       ++..+.++......      ....+.++++++.+|++++  .++++|+|+++++||+.+.+++. .|+++.|
T Consensus       304 -~~~~~~g~~~~~~~------~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       304 -TGRVWRGSAFGGVK------GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             -ccceEEEeeccCCC------cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence             33456665443211      1356888999999999874  58999999999999999988765 5998875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=5.2e-45  Score=326.05  Aligned_cols=323  Identities=28%  Similarity=0.391  Sum_probs=278.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.|.        ....++++|.|. +.++||+|+|.++++|++|++.+.|.++.....|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   71 (324)
T cd08292           1 MRAAVHTQFGDPA--------DVLEIGEVPKPT-PGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVD   71 (324)
T ss_pred             CeeEEEccCCChh--------HeEEEeecCCCC-CCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEE
Confidence            9999999887651        124457899999 4999999999999999999999888765334468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|++++++++||+|+++...|+|++|+.+++..++++|+++++++++.++....++|+++ ..+++++|++|||+|++|
T Consensus        72 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g  150 (324)
T cd08292          72 AVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGG  150 (324)
T ss_pred             EeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEccccc
Confidence            9999999999999999987569999999999999999999999999999999999999988 568999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      .+|++++|+|+.+|+++++++.++++.+.++++|+++++++.+.++   .+.+.+.+.+.++|++|||+|+.....++++
T Consensus       151 ~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~  227 (324)
T cd08292         151 AVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGW---QDKVREAAGGAPISVALDSVGGKLAGELLSL  227 (324)
T ss_pred             HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchH---HHHHHHHhCCCCCcEEEECCCChhHHHHHHh
Confidence            9999999999999999999999999999998899999998877666   5667777888899999999999888899999


Q ss_pred             cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC-chhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049          241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  319 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~  319 (347)
                      ++++|+++.+|.........+....+.++.++.++....+.... |....+.++.+++++.+|.+++.+.+.|+++++.+
T Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~  307 (324)
T cd08292         228 LGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAK  307 (324)
T ss_pred             hcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHH
Confidence            99999999998653322223434456789999998876654443 55566788999999999999976788999999999


Q ss_pred             HHHHHHcCCcceeEEEE
Q 019049          320 AFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       320 a~~~~~~~~~~gk~vv~  336 (347)
                      |++.+.++...||++++
T Consensus       308 a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         308 AAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHcCCCCceEEeC
Confidence            99999988888898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.6e-45  Score=326.44  Aligned_cols=299  Identities=23%  Similarity=0.287  Sum_probs=251.5

Q ss_pred             eEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEe
Q 019049            3 ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAV   82 (347)
Q Consensus         3 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~v   82 (347)
                      |+.+.++|.++.       ..+.++++|.|. |+++||+|||.++++|++|++.+.|.++.. .+|.++|||++|+|+++
T Consensus         1 ~~~~~~~g~~~~-------~~l~~~~~p~P~-~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~v   71 (329)
T TIGR02822         1 AWEVERPGPIED-------GPLRFVERPVPR-PGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGR   71 (329)
T ss_pred             CeeeecCCcCCC-------CCceEEeCCCCC-CCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEE
Confidence            456667765521       124456899999 699999999999999999999998876432 34789999999999999


Q ss_pred             CCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchH
Q 019049           83 GPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAF  134 (347)
Q Consensus        83 G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~  134 (347)
                      |+++++|++||+|+..                            ..+|+|++|+++++..++++|+++++++++.+++.+
T Consensus        72 G~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~  151 (329)
T TIGR02822        72 GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAG  151 (329)
T ss_pred             CCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccc
Confidence            9999999999999631                            125899999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHH
Q 019049          135 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       135 ~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      .|||+++. .+++++|++|||+|+ |++|++++|+|+..|++|++++++++|++.++++|++++++..+..         
T Consensus       152 ~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~---------  220 (329)
T TIGR02822       152 IIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP---------  220 (329)
T ss_pred             hHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC---------
Confidence            99999984 688999999999998 9999999999999999999999999999999999999998754321         


Q ss_pred             HHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049          215 KARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  293 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                          ..++|+++++.+. ..+..++++++++|+++.+|........++...++.+++++.++....         ++.+.
T Consensus       221 ----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~  287 (329)
T TIGR02822       221 ----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT---------RADAR  287 (329)
T ss_pred             ----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC---------HHHHH
Confidence                1368988888765 567889999999999999997543333345556678888888876432         35678


Q ss_pred             HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ++++++.+|++++ ++++|+|+|+++||+.+.+++..||+|+
T Consensus       288 ~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       288 EFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            8899999999985 5789999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=3.9e-45  Score=330.01  Aligned_cols=306  Identities=24%  Similarity=0.286  Sum_probs=251.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++.+...+.++.         +...+++.|. |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        11 ~~~~~~~~~~~~~~---------l~~~~~~~p~-~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~   79 (360)
T PLN02586         11 QKAFGWAARDPSGV---------LSPFHFSRRE-NGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVT   79 (360)
T ss_pred             hheeEEEecCCCCC---------ceEEeecCCC-CCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEE
Confidence            55555555554322         3345788888 59999999999999999999998876542 3568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049           81 AVGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQSELFPVPKGCDLL  125 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  125 (347)
                      ++|+++++|++||+|+..                                   ..+|+|+||++++++.++++|++++++
T Consensus        80 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~  159 (360)
T PLN02586         80 KLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLD  159 (360)
T ss_pred             EECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHH
Confidence            999999999999999631                                   125899999999999999999999999


Q ss_pred             HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcEEEeCCCC
Q 019049          126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNE  204 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~  204 (347)
                      +++.+++.+.|+|+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.+++++ +.++++|++++++..+.
T Consensus       160 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~  238 (360)
T PLN02586        160 AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP  238 (360)
T ss_pred             HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH
Confidence            999999999999999866677789999999887 9999999999999999999888777654 45578999999876542


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                            +.+.+.++  ++|++||++|. ..+..++++++++|+++.+|..... ..++...++.++..+.++..+.    
T Consensus       239 ------~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g~~~~~----  305 (360)
T PLN02586        239 ------EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP-LELPIFPLVLGRKLVGGSDIGG----  305 (360)
T ss_pred             ------HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC-CccCHHHHHhCCeEEEEcCcCC----
Confidence                  12333332  69999999997 4678899999999999999865433 2345555677788877776543    


Q ss_pred             CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                           .+.++++++++.+|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus       306 -----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        306 -----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             -----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence                 35688999999999999766 5899999999999999999889999998

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2e-44  Score=326.31  Aligned_cols=291  Identities=24%  Similarity=0.314  Sum_probs=245.5

Q ss_pred             eeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE-e----c
Q 019049           25 LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-F----A   99 (347)
Q Consensus        25 ~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~----~   99 (347)
                      ...+++.|. |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++||+|+. .    +
T Consensus        20 ~~~~~~~p~-~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~c   97 (375)
T PLN02178         20 SPFHFSRRE-NGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSC   97 (375)
T ss_pred             eEEeecCCC-CCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCC
Confidence            335788888 69999999999999999999999886532 246889999999999999999999999999963 1    1


Q ss_pred             ------------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcC-CC
Q 019049          100 ------------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ-LS  148 (347)
Q Consensus       100 ------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~-~~  148 (347)
                                                    .+|+|+||++++++.++++|+++++++++++++...|+|+++..... .+
T Consensus        98 g~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~  177 (375)
T PLN02178         98 QSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE  177 (375)
T ss_pred             CCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCC
Confidence                                          15899999999999999999999999999999999999999854433 36


Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++++|+++++++.+.      +.+.+.++  ++|++||
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~------~~v~~~~~--~~D~vid  248 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS------QKMKEAVG--TMDFIID  248 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH------HHHHHhhC--CCcEEEE
Confidence            8999999987 999999999999999999999877654 677889999999876542      23334442  6999999


Q ss_pred             CCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049          228 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                      |+|.+ .+..++++++++|+++.+|..... ..++...++.+++++.|+....         .+.+.++++++.+|++++
T Consensus       249 ~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~i~~  318 (375)
T PLN02178        249 TVSAEHALLPLFSLLKVSGKLVALGLPEKP-LDLPIFPLVLGRKMVGGSQIGG---------MKETQEMLEFCAKHKIVS  318 (375)
T ss_pred             CCCcHHHHHHHHHhhcCCCEEEEEccCCCC-CccCHHHHHhCCeEEEEeCccC---------HHHHHHHHHHHHhCCCcc
Confidence            99986 678999999999999999876433 2345566778899999877544         356888999999999998


Q ss_pred             eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          307 HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       307 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .+ +.|+|+++++||+.+.+++..||+|+++
T Consensus       319 ~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        319 DI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             cE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            77 5799999999999999999899999998

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-45  Score=327.14  Aligned_cols=301  Identities=20%  Similarity=0.304  Sum_probs=248.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh-ccCCC-CCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQE-KPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~-g~~~~-~~~~p~~~G~e~~G~   78 (347)
                      ||++++..++..+            +++.+.| + +++||+|||.++|+|++|++.+. |..+. ...+|.++|||++|+
T Consensus         5 ~~~~~~~~~~~~~------------~~~~~~p-~-~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~   70 (343)
T PRK09880          5 TQSCVVAGKKDVA------------VTEQEIE-W-NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGK   70 (343)
T ss_pred             ceEEEEecCCceE------------EEecCCC-C-CCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEE
Confidence            6788888777643            2677777 3 78999999999999999999875 33222 235689999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe--------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHH
Q 019049           79 VDAVGPNVSNFKVGDTVCGF--------------------------------AALGSFAQFIVADQSELFPVPKGCDLLA  126 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~  126 (347)
                      |+++  ++++|++||+|+..                                ..+|+|+||++++++.++++|+++++++
T Consensus        71 V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~  148 (343)
T PRK09880         71 IVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKV  148 (343)
T ss_pred             EEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHH
Confidence            9999  78899999999742                                1259999999999999999999999987


Q ss_pred             HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCC
Q 019049          127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNES  205 (347)
Q Consensus       127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~  205 (347)
                      ++ +..+++++|+++. .....+|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.++++|+++++++++.+
T Consensus       149 aa-~~~~~~~a~~al~-~~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~  225 (343)
T PRK09880        149 MA-FAEPLAVAIHAAH-QAGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD  225 (343)
T ss_pred             HH-hhcHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc
Confidence            65 4578899999984 456668999999997 9999999999999999 699999999999999999999999987655


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  284 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      +    .++...  .+++|++|||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.++...      
T Consensus       226 ~----~~~~~~--~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~------  292 (343)
T PRK09880        226 L----DHYKAE--KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP-PEFPMMTLIVKEISLKGSFRF------  292 (343)
T ss_pred             H----HHHhcc--CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHHhCCcEEEEEeec------
Confidence            3    223322  2369999999997 4678899999999999999975432 345666778899999987632      


Q ss_pred             chhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          285 PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       285 ~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                          .+.++++++++.+|++++  .++++|+++|+++||+.+.+++..||+++.+
T Consensus       293 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        293 ----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             ----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence                246788999999999986  5789999999999999999988889999864

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.9e-44  Score=327.14  Aligned_cols=310  Identities=23%  Similarity=0.356  Sum_probs=255.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..++++           ..++++|.|. |+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         3 ~~a~~~~~~~~~-----------~~~~~~~~P~-~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~   69 (368)
T cd08300           3 CKAAVAWEAGKP-----------LSIEEVEVAP-PKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVE   69 (368)
T ss_pred             ceEEEEecCCCC-----------cEEEEeecCC-CCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEE
Confidence            899998877654           3446899999 59999999999999999999999887643 3578999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|+++++|++||+|+...                                                ..|+|+||+++++
T Consensus        70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  149 (368)
T cd08300          70 SVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAE  149 (368)
T ss_pred             EeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEch
Confidence            9999999999999997641                                                1258999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++++.+++++.+||+++...+.+++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.++
T Consensus       150 ~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~  228 (368)
T cd08300         150 ISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK  228 (368)
T ss_pred             hceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999999877889999999999986 9999999999999999 7999999999999999


Q ss_pred             hcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCC-CCcchhHhh
Q 019049          192 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPANIAL  266 (347)
Q Consensus       192 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~  266 (347)
                      ++|+++++++.+.  ++   .+.+.+.+.+ ++|++|||+|+ ..+..++++++++ |+++.+|...... ...+...+.
T Consensus       229 ~lGa~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~  304 (368)
T cd08300         229 KFGATDCVNPKDHDKPI---QQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV  304 (368)
T ss_pred             HcCCCEEEcccccchHH---HHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh
Confidence            9999999987754  24   4455556665 89999999997 5778899999886 9999998764221 111222222


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                       ++..+.++..+.+..      .+.+.++++++.+|++++  .++++|+|+++++||+.+.+++. .|++++
T Consensus       305 -~~~~~~g~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         305 -TGRVWKGTAFGGWKS------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             -hcCeEEEEEecccCc------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence             344666665444321      366788999999999985  48899999999999999988775 488774

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.7e-44  Score=326.59  Aligned_cols=309  Identities=22%  Similarity=0.327  Sum_probs=258.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           ..+++++.|. |+++||+||+.++++|++|++.+.|..+ ...+|.++|||++|+|+
T Consensus         3 ~ka~~~~~~~~~-----------~~l~~~~~p~-~~~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~   69 (369)
T cd08301           3 CKAAVAWEAGKP-----------LVIEEVEVAP-PQAMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVE   69 (369)
T ss_pred             cEEEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEE
Confidence            899999887765           4446889999 5999999999999999999999888654 24578999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCcceeeEeee
Q 019049           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (347)
                      ++|+++++|++||+|+.+.                                                 ..|+|++|++++
T Consensus        70 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~  149 (369)
T cd08301          70 SVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVH  149 (369)
T ss_pred             EeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEe
Confidence            9999999999999998641                                                 137899999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      +..++++|+++++++++++++++.++|+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+
T Consensus       150 ~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         150 VGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             cccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            99999999999999999999999999999878899999999999987 9999999999999999 899999999999999


Q ss_pred             HhcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccC-CEEEEEeecCCC-CCCcchhHh
Q 019049          191 KSLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWG-AQILVIGFASGE-IPVIPANIA  265 (347)
Q Consensus       191 ~~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~  265 (347)
                      +++|++.++++...  .+   .+.+.+.+++ ++|++|||+|.. .+..++++++++ |+++.+|..... ...++...+
T Consensus       229 ~~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~  304 (369)
T cd08301         229 KKFGVTEFVNPKDHDKPV---QEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL  304 (369)
T ss_pred             HHcCCceEEcccccchhH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH
Confidence            99999998887652  23   3444555554 899999999974 568889999996 999999976532 112222223


Q ss_pred             hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                       .+++++.++....+.      .+..++++++++.+|.+++  .++++|+|+|+++||+.+.+++.. |+++
T Consensus       305 -~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         305 -LNGRTLKGTLFGGYK------PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             -hcCCeEEEEecCCCC------hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence             468999998765432      1356888999999999875  478999999999999999998865 8776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-43  Score=319.28  Aligned_cols=307  Identities=21%  Similarity=0.259  Sum_probs=253.1

Q ss_pred             Cceeeecc--ccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCC--ceeEEEEEeCCCCCCCCCCCEEE
Q 019049           21 SPIVLSKT--EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS--DYSGTVDAVGPNVSNFKVGDTVC   96 (347)
Q Consensus        21 ~~~~~~~~--~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~~Gd~V~   96 (347)
                      +.|.+.+.  .+.|..+++||||||+.++++||.|.....+... ....|.++|+  +++|+|..+|+++++|++||+|+
T Consensus        25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~  103 (348)
T PLN03154         25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLIS  103 (348)
T ss_pred             ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEE
Confidence            33777663  5665424799999999999999999875443222 2235888998  88999999999999999999999


Q ss_pred             EecCCCcceeeEeeeCCC--eee--CCCCCCHH-HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 019049           97 GFAALGSFAQFIVADQSE--LFP--VPKGCDLL-AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK  171 (347)
Q Consensus        97 ~~~~~g~~~~~~~~~~~~--~~~--~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~  171 (347)
                      ++   |+|++|.+++.+.  +++  +|++++++ ++|+++++++|||+++...+++++|++|||+|++|++|++++|+|+
T Consensus       104 ~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk  180 (348)
T PLN03154        104 GI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAK  180 (348)
T ss_pred             ec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence            86   6899999998853  544  59999987 6888999999999999888899999999999999999999999999


Q ss_pred             HcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEE
Q 019049          172 VCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       172 ~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~  249 (347)
                      .+|++|++++++++++++++ ++|+++++++.+. ++   .+.+.+.++ .++|++|||+|+..+..++++++++|+++.
T Consensus       181 ~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~---~~~i~~~~~-~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~  256 (348)
T PLN03154        181 LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDL---DAALKRYFP-EGIDIYFDNVGGDMLDAALLNMKIHGRIAV  256 (348)
T ss_pred             HcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccH---HHHHHHHCC-CCcEEEEECCCHHHHHHHHHHhccCCEEEE
Confidence            99999999999999999987 7999999998754 44   344444554 589999999998888999999999999999


Q ss_pred             EeecCCCCC-----CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHH
Q 019049          250 IGFASGEIP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI  324 (347)
Q Consensus       250 ~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~  324 (347)
                      +|..++...     ..+...++.+++++.|++...+..    ...+.++++++++.+|++++.+..+|+|+++++|++.+
T Consensus       257 ~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~----~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l  332 (348)
T PLN03154        257 CGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH----LFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGL  332 (348)
T ss_pred             ECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHH----HHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHH
Confidence            987653211     123455778899999987544321    12467888999999999998888899999999999999


Q ss_pred             HcCCcceeEEEEeCC
Q 019049          325 EDRKVIGKVMIAFDD  339 (347)
Q Consensus       325 ~~~~~~gk~vv~~~~  339 (347)
                      .+++..||+|+++.+
T Consensus       333 ~~g~~~GKvVl~~~~  347 (348)
T PLN03154        333 FSGKNVGKQVIRVAK  347 (348)
T ss_pred             HcCCCCceEEEEecC
Confidence            999999999999854

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-44  Score=321.89  Aligned_cols=312  Identities=22%  Similarity=0.311  Sum_probs=255.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.            ..+++.|.|.+++++||+|||.++++|++|++.+.....  ..+|.++|||++|+|+
T Consensus         1 Mka~~~~~~~~------------~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~   66 (347)
T PRK10309          1 MKSVVNDTDGI------------VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVE   66 (347)
T ss_pred             CceEEEeCCCc------------eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEE
Confidence            99999998764            334678889843689999999999999999976433211  2357899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      ++|+++++|++||+|+.+.                           ..|+|++|+.++++.++++|+++++++++.+. +
T Consensus        67 ~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~  145 (347)
T PRK10309         67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-P  145 (347)
T ss_pred             EeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-H
Confidence            9999999999999998642                           25899999999999999999999999998773 5


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      +.++++++ ....++++++|+|+|+ |++|++++|+|+.+|++ |+++++++++++.++++|+++++++.+..    .++
T Consensus       146 ~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~----~~~  219 (347)
T PRK10309        146 ITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS----APQ  219 (347)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC----HHH
Confidence            66788876 5678899999999986 99999999999999996 78999999999999999999999876543    234


Q ss_pred             HHHHhcCCccc-EEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCC--CcchhHhhhcceEEEEEEeccccccCchhH
Q 019049          213 FLKARKLKGVD-VLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP--VIPANIALVKNWTVHGLYWGSYKIHRPHVL  288 (347)
Q Consensus       213 ~~~~~~~~~~d-~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      +.+.+.+.++| ++|||+|. ..+..++++++++|+++.+|.......  ..+...++.+++++.+++.+.....    .
T Consensus       220 ~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~----~  295 (347)
T PRK10309        220 IQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPW----P  295 (347)
T ss_pred             HHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCc----c
Confidence            55666667888 99999997 477899999999999999997654321  1122356788999999765422111    1


Q ss_pred             HHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          289 EDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       289 ~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .+.++++++++.+|.++  +.++++|+|+|+++|++.+.+++..||+|+++
T Consensus       296 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        296 GQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            35678899999999986  46899999999999999999998889999976

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=9e-44  Score=321.14  Aligned_cols=308  Identities=24%  Similarity=0.310  Sum_probs=259.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |+|+++++++.+           +.+++++.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        10 ~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv   76 (357)
T PLN02514         10 TTGWAARDPSGH-----------LSPYTYTLRK-TGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVV   76 (357)
T ss_pred             EEEEEEecCCCC-----------ceEEeecCCC-CCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEE
Confidence            578999999876           5557899999 59999999999999999999998876532 3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-e----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049           81 AVGPNVSNFKVGDTVCG-F----------------------------------AALGSFAQFIVADQSELFPVPKGCDLL  125 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~-~----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  125 (347)
                      ++|+++++|++||+|+. +                                  ..+|+|++|++++.+.++++|++++++
T Consensus        77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  156 (357)
T PLN02514         77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPE  156 (357)
T ss_pred             EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHH
Confidence            99999999999999963 1                                  125899999999999999999999999


Q ss_pred             HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCC
Q 019049          126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNE  204 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~  204 (347)
                      +++.+++.+.|||+++......++|++|+|+|+ |++|++++|+|+.+|++|++++.++++++.+ +++|++.+++..+.
T Consensus       157 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~  235 (357)
T PLN02514        157 QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA  235 (357)
T ss_pred             HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence            999999999999999876666789999999976 9999999999999999999999888777655 56999887765432


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                            ..+.+.+  .++|++|||+|. ..+..++++++++|+++.+|...... .++...++.+++++.+++...    
T Consensus       236 ------~~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~----  302 (357)
T PLN02514        236 ------AEMQEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPL-QFVTPMLMLGRKVITGSFIGS----  302 (357)
T ss_pred             ------HHHHHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCC-cccHHHHhhCCcEEEEEecCC----
Confidence                  1233333  369999999996 57788999999999999999765332 345566778899999987654    


Q ss_pred             CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCC
Q 019049          284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK  341 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~  341 (347)
                           ...++++++++.+|++++.+ ++|+++++.+||+.+.+++..||+|+.++...
T Consensus       303 -----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~~  354 (357)
T PLN02514        303 -----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAGSN  354 (357)
T ss_pred             -----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccccc
Confidence                 35788899999999998766 58999999999999999998899999986543

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=321.27  Aligned_cols=310  Identities=24%  Similarity=0.367  Sum_probs=256.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           ..++++|.|. ++++||+||+.++++|++|++.+.|..+  ..+|.++|||++|+|+
T Consensus         3 ~ka~~~~~~~~~-----------~~~~~~~~p~-~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~   68 (365)
T cd08277           3 CKAAVAWEAGKP-----------LVIEEIEVAP-PKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVE   68 (365)
T ss_pred             cEEEEEccCCCC-----------cEEEEEECCC-CCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEE
Confidence            789989887754           4457899999 5999999999999999999999988654  3568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----------------------------------------------CCCcceeeEeeeCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA-----------------------------------------------ALGSFAQFIVADQS  113 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~  113 (347)
                      ++|++++++++||+|+...                                               ..|+|++|+.++.+
T Consensus        69 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~  148 (365)
T cd08277          69 SVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDEN  148 (365)
T ss_pred             eeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchh
Confidence            9999999999999998641                                               13789999999999


Q ss_pred             CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh
Q 019049          114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS  192 (347)
Q Consensus       114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~  192 (347)
                      .++++|+++++++++.+++++.|||+++...+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.+++
T Consensus       149 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~  227 (365)
T cd08277         149 YVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE  227 (365)
T ss_pred             heEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            999999999999999999999999999877889999999999986 9999999999999999 79999999999999999


Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchhHhhhcce
Q 019049          193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVKNW  270 (347)
Q Consensus       193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  270 (347)
                      +|++++++..+.+. ...+.+.+.++ .++|++|||+|. ..+..++++++++ |+++.+|...+....++...++. ++
T Consensus       228 ~ga~~~i~~~~~~~-~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~  304 (365)
T cd08277         228 FGATDFINPKDSDK-PVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GR  304 (365)
T ss_pred             cCCCcEeccccccc-hHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CC
Confidence            99999988765321 01334555555 689999999996 5668899999885 99999987653222233333443 78


Q ss_pred             EEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          271 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ++.+++.+.+..      ...++++++++.++.++  +.++++|+++|+++||+.+.+++. .|+++
T Consensus       305 ~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i  364 (365)
T cd08277         305 TWKGSFFGGFKS------RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI  364 (365)
T ss_pred             EEEeeecCCCCh------HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence            888877655321      35678899999999876  458899999999999999988874 47776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.9e-43  Score=321.27  Aligned_cols=308  Identities=20%  Similarity=0.249  Sum_probs=241.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCC------CCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLN------SSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD   74 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e   74 (347)
                      |||+++.+++..            .++++|.|++.      ++|||+|||.++|||++|++.+.|..+  ..+|.++|||
T Consensus         3 mka~v~~~~~~~------------~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~--~~~p~i~GhE   68 (393)
T TIGR02819         3 NRGVVYLGPGKV------------EVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT--APTGLVLGHE   68 (393)
T ss_pred             ceEEEEecCCce------------eEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC--CCCCccccce
Confidence            999999888864            23688888841      269999999999999999999987643  3568999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEe-------------------------------c------CCCcceeeEeeeCC--Ce
Q 019049           75 YSGTVDAVGPNVSNFKVGDTVCGF-------------------------------A------ALGSFAQFIVADQS--EL  115 (347)
Q Consensus        75 ~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~------~~g~~~~~~~~~~~--~~  115 (347)
                      ++|+|+++|++|++|++||||+..                               .      .+|+|+||+++++.  .+
T Consensus        69 ~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l  148 (393)
T TIGR02819        69 ITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNL  148 (393)
T ss_pred             eEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCce
Confidence            999999999999999999999531                               0      24899999999974  79


Q ss_pred             eeCCCCCCH----HHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHH
Q 019049          116 FPVPKGCDL----LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFL  190 (347)
Q Consensus       116 ~~~p~~~~~----~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~  190 (347)
                      +++|++++.    .+++++.+++.++|+++ ..++++++++|+|.|+ |++|++++|+|+.+|++ |++++.+++|++.+
T Consensus       149 ~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a  226 (393)
T TIGR02819       149 LKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQA  226 (393)
T ss_pred             EECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH
Confidence            999998753    35677788999999998 4688999999999766 99999999999999997 45556788899999


Q ss_pred             HhcCCcEEEeCC-CCCchhhHHHHHHHhcCCcccEEEeCCCcc---------------chHHHHhccccCCEEEEEeecC
Q 019049          191 KSLGVDHVVDLS-NESVIPSVKEFLKARKLKGVDVLYDPVGGK---------------LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       191 ~~~g~~~v~~~~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +++|++. ++.. +.++   .+.+.+.+.+.++|++|||+|.+               .+..++++++++|+++.+|...
T Consensus       227 ~~~Ga~~-v~~~~~~~~---~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~  302 (393)
T TIGR02819       227 RSFGCET-VDLSKDATL---PEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV  302 (393)
T ss_pred             HHcCCeE-EecCCcccH---HHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence            9999975 4443 3344   44566667777899999999975               6889999999999999999863


Q ss_pred             C-CCCC-----------cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eec-eeeChhhHHH
Q 019049          255 G-EIPV-----------IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HIS-HTYSPSEANL  319 (347)
Q Consensus       255 ~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~-~~~~~~~~~~  319 (347)
                      . ....           +....++.++.++.+.....         .+...++++++.+|++++  .++ ++|+|+++++
T Consensus       303 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~  373 (393)
T TIGR02819       303 TEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV---------MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPE  373 (393)
T ss_pred             CcccccccccccccccccchHHhhccCceEEeccCCh---------hhhHHHHHHHHHcCCCCHHHceecceecHHHHHH
Confidence            2 1111           11223345555555521100         133467899999999985  344 7899999999


Q ss_pred             HHHHHHcCCcceeEEEEeC
Q 019049          320 AFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       320 a~~~~~~~~~~gk~vv~~~  338 (347)
                      ||+.+.+++. +|+++.++
T Consensus       374 a~~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       374 GYAEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             HHHHHhhCCc-eEEEEeCC
Confidence            9999988754 79999873

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=2.2e-43  Score=318.05  Aligned_cols=299  Identities=23%  Similarity=0.327  Sum_probs=249.7

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEe-----
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF-----   98 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----   98 (347)
                      ..+++.|.|. |+++||+|||.++++|++|++.+.+.+.....+|.++|||++|+|+++|+++..+ +||+|+..     
T Consensus        11 ~~~~~~p~P~-~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~c   88 (349)
T TIGR03201        11 MVKTRVEIPE-LGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPC   88 (349)
T ss_pred             ceEEeccCCC-CCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCC
Confidence            3446899999 5999999999999999999998754433223568899999999999999999887 99999751     


Q ss_pred             ----------------------cCCCcceeeEeeeCCCeeeCCC------CCCHHHHccCcchHHHHHHHHHHhcCCCCC
Q 019049           99 ----------------------AALGSFAQFIVADQSELFPVPK------GCDLLAAAALPVAFGTSHVALVHRAQLSSG  150 (347)
Q Consensus        99 ----------------------~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~  150 (347)
                                            ..+|+|++|++++.+.++++|+      ++++++++.+++++.++|+++. ..++++|
T Consensus        89 g~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g  167 (349)
T TIGR03201        89 GECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKG  167 (349)
T ss_pred             CCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCC
Confidence                                  1358999999999999999999      8999999999999999999985 5789999


Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc----EEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD----VLY  226 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d----~v~  226 (347)
                      ++|+|+|+ |++|++++|+|+..|++|++++++++|++.++++|+++++++.+.+..+..+.+.+.+++.++|    .+|
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~  246 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIF  246 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEE
Confidence            99999999 9999999999999999999999999999999999999999876643222245566677777776    899


Q ss_pred             eCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee
Q 019049          227 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT  305 (347)
Q Consensus       227 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~  305 (347)
                      ||+|+. .+..++++++++|+++.+|...... .++...++.++.++.+++...         .+.++++++++.+|+++
T Consensus       247 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~i~~g~i~  316 (349)
T TIGR03201       247 ECSGSKPGQESALSLLSHGGTLVVVGYTMAKT-EYRLSNLMAFHARALGNWGCP---------PDRYPAALDLVLDGKIQ  316 (349)
T ss_pred             ECCCChHHHHHHHHHHhcCCeEEEECcCCCCc-ccCHHHHhhcccEEEEEecCC---------HHHHHHHHHHHHcCCCC
Confidence            999985 4677899999999999999765432 344456667788888866432         35788999999999998


Q ss_pred             ee-eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          306 IH-ISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       306 ~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +. +.+.|+|+++++||+.+.+++..||++++
T Consensus       317 ~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       317 LGPFVERRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             cccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence            53 33579999999999999999989999885

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=4.8e-43  Score=314.85  Aligned_cols=302  Identities=23%  Similarity=0.302  Sum_probs=248.7

Q ss_pred             eeeccccC----CCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCce--eEEEEEeCCCCCCCCCCCEEEE
Q 019049           24 VLSKTEPI----PQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY--SGTVDAVGPNVSNFKVGDTVCG   97 (347)
Q Consensus        24 ~~~~~~~~----p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~   97 (347)
                      +.+.+.+.    |+ |+++||||||.++++||.|++...|.......+|.++|++.  .|++..+|+.+++|++||+|++
T Consensus        21 ~~~~~~~~~~~~p~-p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~   99 (338)
T cd08295          21 LELRTTKLTLKVPP-GGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWG   99 (338)
T ss_pred             eEEEEecCCcCCCC-CCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEe
Confidence            44456665    88 69999999999999999999998875432234577889754  4566667888889999999998


Q ss_pred             ecCCCcceeeEeeeC-CCeeeCC-CCCCHH-HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Q 019049           98 FAALGSFAQFIVADQ-SELFPVP-KGCDLL-AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG  174 (347)
Q Consensus        98 ~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g  174 (347)
                      +   |+|+||+++++ ..++++| +++++. +++++++++.|||+++...+++++|++|||+|++|++|++++|+|+.+|
T Consensus       100 ~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G  176 (338)
T cd08295         100 F---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKG  176 (338)
T ss_pred             c---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcC
Confidence            6   68999999999 7999995 678887 7999999999999999888999999999999999999999999999999


Q ss_pred             CEEEEEecChhhHHHHHh-cCCcEEEeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEee
Q 019049          175 ATIIAVARGAEKIKFLKS-LGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       175 ~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ++|+++++++++.+++++ +|+++++++.+. ++   .+.+.+.++ .++|++||++|+..+..++++++++|+++.+|.
T Consensus       177 ~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~---~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         177 CYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDL---DAALKRYFP-NGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             CEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccH---HHHHHHhCC-CCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence            999999999999999998 999999987653 44   334444444 689999999999888999999999999999986


Q ss_pred             cCCCCC-----CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcC
Q 019049          253 ASGEIP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  327 (347)
Q Consensus       253 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~  327 (347)
                      ......     ..+...++.+++++.++....+    +....+.++++++++.+|.+++.+...|+++++++|++.+.++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~  328 (338)
T cd08295         253 ISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDY----LHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTG  328 (338)
T ss_pred             cccCCCCCCCCccCHHHHhhccceeeEEEehhh----HHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcC
Confidence            543211     1233456677888887655432    1223467888999999999998777789999999999999999


Q ss_pred             CcceeEEEEe
Q 019049          328 KVIGKVMIAF  337 (347)
Q Consensus       328 ~~~gk~vv~~  337 (347)
                      +..||+|+++
T Consensus       329 ~~~GkvVl~~  338 (338)
T cd08295         329 SNIGKQVVKV  338 (338)
T ss_pred             CCCceEEEEC
Confidence            9999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=5.7e-43  Score=316.05  Aligned_cols=306  Identities=24%  Similarity=0.310  Sum_probs=260.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC-CC---------CCCCCcc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QE---------KPPLPFV   70 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~-~~---------~~~~p~~   70 (347)
                      |||+++.+++.            ..+++++.|. |+++||+||+.++++|++|++.+.+.. ..         +..+|.+
T Consensus         1 mka~~~~~~~~------------l~~~~~~~p~-~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i   67 (351)
T cd08233           1 MKAARYHGRKD------------IRVEEVPEPP-VKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVT   67 (351)
T ss_pred             CceEEEecCCc------------eEEEeccCCC-CCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCce
Confidence            99999988764            3346889999 599999999999999999998765431 11         1236889


Q ss_pred             cCCceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCC
Q 019049           71 PGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGC  122 (347)
Q Consensus        71 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~  122 (347)
                      +|||++|+|+++|+++++|++||+|+...                            .+|+|++|++++.+.++++|+++
T Consensus        68 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~  147 (351)
T cd08233          68 LGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNV  147 (351)
T ss_pred             ecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCC
Confidence            99999999999999999999999998621                            15899999999999999999999


Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++++.+ .++.+||+++ ..++++++++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus       148 ~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~  224 (351)
T cd08233         148 PLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP  224 (351)
T ss_pred             CHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence            99998866 6888999998 7889999999999986 9999999999999999 89999999999999999999999998


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  280 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (347)
                      .+.++   .+.+.+.+.+.++|+++||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.+++... 
T Consensus       225 ~~~~~---~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~-  299 (351)
T cd08233         225 TEVDV---VAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKP-ISFNPNDLVLKEKTLTGSICYT-  299 (351)
T ss_pred             CccCH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCC-CccCHHHHHhhCcEEEEEeccC-
Confidence            87776   5666677777789999999986 5778899999999999999976532 3345556778899999876432 


Q ss_pred             cccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhH-HHHHHHHHcCCcc-eeEEE
Q 019049          281 KIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEA-NLAFSAIEDRKVI-GKVMI  335 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vv  335 (347)
                              .+.++++++++.+|.+++  .++++|+++|+ ++|++.+.+++.. ||+||
T Consensus       300 --------~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         300 --------REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             --------cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence                    367899999999999964  47889999996 7999999998874 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=3.1e-43  Score=317.92  Aligned_cols=302  Identities=22%  Similarity=0.258  Sum_probs=238.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCC--CCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP--PLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~--~~p~~~G~e~~G~   78 (347)
                      |||+++..++ ++          ..++++|.|+ |+++||+|||.++++|++|++.+.|.++..+  .+|.++|||++|+
T Consensus         1 mka~~~~~~~-~~----------l~~~~~p~p~-~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~   68 (355)
T cd08230           1 MKAIAVKPGK-PG----------VRVVDIPEPE-PTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGV   68 (355)
T ss_pred             CceeEecCCC-CC----------CeEEeCCCCC-CCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceE
Confidence            8999998643 21          3346899999 5999999999999999999999998754322  3578999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec------------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHc
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA------------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAA  128 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa  128 (347)
                      |+++|++ ++|++||||+...                              .+|+|++|++++++.++++|++++  +++
T Consensus        69 V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a  145 (355)
T cd08230          69 VEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVG  145 (355)
T ss_pred             EEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cce
Confidence            9999999 9999999997531                              248899999999999999999998  444


Q ss_pred             cCcchHHHHHHHHHHh------cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---ChhhHHHHHhcCCcEEE
Q 019049          129 ALPVAFGTSHVALVHR------AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVV  199 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~------~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---~~~~~~~~~~~g~~~v~  199 (347)
                      ++..++.+++.++...      .++.+|++|+|+|+ |++|++++|+|+..|++|+++++   +++|++.++++|++. +
T Consensus       146 ~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v  223 (355)
T cd08230         146 VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-V  223 (355)
T ss_pred             eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-e
Confidence            5556777666555322      23568999999997 99999999999999999999987   678999999999987 4


Q ss_pred             eCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC-CCCcc----hhHhhhcceEEE
Q 019049          200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIP----ANIALVKNWTVH  273 (347)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~----~~~~~~~~~~~~  273 (347)
                      ++.+.++   .+  ..  ...++|++|||+|++ .+..++++++++|+++.+|...+. ...++    ...++.+++++.
T Consensus       224 ~~~~~~~---~~--~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~  296 (355)
T cd08230         224 NSSKTPV---AE--VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALV  296 (355)
T ss_pred             cCCccch---hh--hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEE
Confidence            6555443   11  11  135899999999974 678899999999999999976642 11222    245678999999


Q ss_pred             EEEeccccccCchhHHHHHHHHHHHHHcCc------eeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          274 GLYWGSYKIHRPHVLEDSLRELLLWAAKGL------ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      |+...+         .+.++++++++.++.      +++.++++|+++|+++||+.+.++.  +|+|++|
T Consensus       297 g~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         297 GSVNAN---------KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             EecCCc---------hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            976433         245677777777665      5556889999999999999887654  4999865

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.1e-42  Score=313.10  Aligned_cols=324  Identities=28%  Similarity=0.362  Sum_probs=273.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCC-CeEEEEEEEecCChhhHHHHhccCCCCCC----CCcccCCce
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-TAVRVRVKATSLNYANYLQILGKYQEKPP----LPFVPGSDY   75 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~i~v~~~~i~~~d~~~~~g~~~~~~~----~p~~~G~e~   75 (347)
                      |||+++.++|.+.        ....+++.|.|. |.+ +||+|++.++++|++|+..+.|..+....    +|.++|||+
T Consensus         1 ~~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~   71 (341)
T cd08290           1 AKALVYTEHGEPK--------EVLQLESYEIPP-PGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEG   71 (341)
T ss_pred             CceEEEccCCCch--------hheEEeecCCCC-CCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcce
Confidence            9999999998762        113456788888 477 99999999999999999998887643222    677899999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049           76 SGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  154 (347)
Q Consensus        76 ~G~V~~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl  154 (347)
                      +|+|+++|+++..+++||+|++.. ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.....++++++||
T Consensus        72 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  151 (341)
T cd08290          72 VGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI  151 (341)
T ss_pred             EEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence            999999999999999999999875 3599999999999999999999999999999999999999997778899999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHhcCCcEEEeCCCC---CchhhHHHHHHHhcCCcccEEEe
Q 019049          155 VLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNE---SVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       155 I~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      |+|++|++|++++|+|+..|+++++++.++    ++.+.++++|+++++++...   .+   ...+...+.+ ++|+++|
T Consensus       152 I~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~i~~~~~~-~~d~vld  227 (341)
T cd08290         152 QNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLA---TELLKSAPGG-RPKLALN  227 (341)
T ss_pred             EccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccH---HHHHHHHcCC-CceEEEE
Confidence            999999999999999999999999998876    66888889999999987664   44   4445555555 8999999


Q ss_pred             CCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc-cCchhHHHHHHHHHHHHHcCceee
Q 019049          228 PVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                      |+|+......+++++++|+++.+|.........+....+.++.++.+.....+.. .+|....+.++.+++++.++.+.+
T Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  307 (341)
T cd08290         228 CVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKA  307 (341)
T ss_pred             CcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccC
Confidence            9999878888999999999999985443322334445578899999988765544 556666678899999999999987


Q ss_pred             eeceee---ChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          307 HISHTY---SPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       307 ~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .+...+   ++++++++++.+.++...||+|+++
T Consensus       308 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         308 PPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             CcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            666677   9999999999999999999999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.7e-42  Score=309.19  Aligned_cols=311  Identities=22%  Similarity=0.289  Sum_probs=253.8

Q ss_pred             CceEEecc-c-CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049            1 MEALVCRK-L-GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~   78 (347)
                      ||+|++.+ + |.+.       .+.+.+++.+.|+ |+++||+|||.++++|+.|.....  .  ..++|.++|+|++|+
T Consensus         3 ~~~~~~~~~~~~~~~-------~~~l~~~~~~~p~-~~~~evlVkv~a~~in~~~~~~~~--~--~~~~p~v~G~e~~G~   70 (329)
T cd08294           3 AKTWVLKKHFDGKPK-------ESDFELVEEELPP-LKDGEVLCEALFLSVDPYMRPYSK--R--LNEGDTMIGTQVAKV   70 (329)
T ss_pred             ceEEEEecCCCCCCC-------ccceEEEecCCCC-CCCCcEEEEEEEEecCHHHhcccc--c--CCCCCcEecceEEEE
Confidence            89999998 3 5541       1225556899999 699999999999999998765211  1  124588999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCC---CeeeCCCCCC-----HHHHccCcchHHHHHHHHHHhcCCCCC
Q 019049           79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQS---ELFPVPKGCD-----LLAAAALPVAFGTSHVALVHRAQLSSG  150 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~l~~~~~~a~~~l~~~~~~~~~  150 (347)
                      |++   .+++|++||+|+++   ++|++|++++.+   .++++|++++     ...+++++.+++|||+++...+++++|
T Consensus        71 V~~---~~~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g  144 (329)
T cd08294          71 IES---KNSKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAG  144 (329)
T ss_pred             Eec---CCCCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence            985   45689999999986   479999999999   9999999998     233346789999999999888999999


Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++|||+|++|++|.+++|+|+.+|++|+++++++++.+.++++|+++++++.+.++   .+.+.+.++ .++|++||++|
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~---~~~v~~~~~-~gvd~vld~~g  220 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSL---EEALKEAAP-DGIDCYFDNVG  220 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccH---HHHHHHHCC-CCcEEEEECCC
Confidence            99999999999999999999999999999999999999999999999999988776   445555554 68999999999


Q ss_pred             ccchHHHHhccccCCEEEEEeecCCC-CC-----CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCce
Q 019049          231 GKLTKESLKLLNWGAQILVIGFASGE-IP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI  304 (347)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l  304 (347)
                      ++.+..++++++++|+++.+|..... ..     ......++.+++++.++....+.    ....+.++++++++.+|++
T Consensus       221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~l~~~g~i  296 (329)
T cd08294         221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ----DRWPEALKQLLKWIKEGKL  296 (329)
T ss_pred             HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhH----HHHHHHHHHHHHHHHCCCC
Confidence            98889999999999999999854321 11     11223456778888886643321    2335678899999999999


Q ss_pred             eeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          305 TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       305 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++.+...|+++++++|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         297 KYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             cCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            977667899999999999999999999999863

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1.2e-42  Score=284.00  Aligned_cols=325  Identities=29%  Similarity=0.378  Sum_probs=278.6

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      |+++++++|.|        .+++...++++|+. ..++|+|+..|+-|||+|+..++|.|+.++.+|.+-|.|++|.|+.
T Consensus        21 kalvY~~hgdP--------~kVlql~~~~~p~~-~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~   91 (354)
T KOG0025|consen   21 KALVYSEHGDP--------AKVLQLKNLELPAV-PGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVA   91 (354)
T ss_pred             ceeeecccCCc--------hhhheeecccCCCC-CCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEE
Confidence            78899999988        55667778999996 5566999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecC-CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           82 VGPNVSNFKVGDTVCGFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      +|+++.+|++||+|+-... .|.|++|.+.+++.++++++.++++.||++...-+|||.-|.....+++|++|+-.||++
T Consensus        92 vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS  171 (354)
T KOG0025|consen   92 VGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANS  171 (354)
T ss_pred             ecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCccc
Confidence            9999999999999997764 499999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHH
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE  236 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  236 (347)
                      ++|.+.+|+|+++|.+-+-++++....+.+    +++||++|+.-.+..-   -+.........+..+.|||+|+.....
T Consensus       172 ~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~---~~~~k~~~~~~~prLalNcVGGksa~~  248 (354)
T KOG0025|consen  172 GVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD---RKMKKFKGDNPRPRLALNCVGGKSATE  248 (354)
T ss_pred             HHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc---hhhhhhhccCCCceEEEeccCchhHHH
Confidence            999999999999999988888877665554    5699999985221110   011111123457889999999998889


Q ss_pred             HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC--chhHHHHHHHHHHHHHcCceeeeeceeeCh
Q 019049          237 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSP  314 (347)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~  314 (347)
                      +.+.|..+|+++.+|.-+......+...+++|++.+.|+++..|...+  |+...+.+.++.+++..|++..+.....+|
T Consensus       249 iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L  328 (354)
T KOG0025|consen  249 IARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPL  328 (354)
T ss_pred             HHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeec
Confidence            999999999999998777655567778899999999999999998765  888889999999999999999888788899


Q ss_pred             hhHHHHHHHHHcC-CcceeEEEEeC
Q 019049          315 SEANLAFSAIEDR-KVIGKVMIAFD  338 (347)
Q Consensus       315 ~~~~~a~~~~~~~-~~~gk~vv~~~  338 (347)
                      ++...|++...+. ...||-++.++
T Consensus       329 ~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  329 ADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             hhhhHHHHHHHHHhccCCceEEEec
Confidence            9998888865543 34467666653

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2e-42  Score=317.73  Aligned_cols=312  Identities=19%  Similarity=0.225  Sum_probs=248.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh-ccCCCC-----CCCCcccCCc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQEK-----PPLPFVPGSD   74 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~-g~~~~~-----~~~p~~~G~e   74 (347)
                      |||+++.+++.            +.++++|.|+ |+++||+|||.++|+|++|++.+. |.....     ..+|.++|||
T Consensus         3 ~~a~~~~~~~~------------l~~~e~p~P~-~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE   69 (410)
T cd08238           3 TKAWRMYGKGD------------LRLEKFELPE-IADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE   69 (410)
T ss_pred             cEEEEEEcCCc------------eEEEecCCCC-CCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence            77888877664            3346899999 599999999999999999999763 432111     1368899999


Q ss_pred             eeEEEEEeCCCCC-CCCCCCEEEEec----------------CCCcceeeEeeeCC----CeeeCCCCCCHHHHccC-cc
Q 019049           75 YSGTVDAVGPNVS-NFKVGDTVCGFA----------------ALGSFAQFIVADQS----ELFPVPKGCDLLAAAAL-PV  132 (347)
Q Consensus        75 ~~G~V~~vG~~v~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l-~~  132 (347)
                      ++|+|+++|++++ +|++||||+...                .+|+|++|++++++    .++++|+++++++++.+ +.
T Consensus        70 ~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl  149 (410)
T cd08238          70 FAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL  149 (410)
T ss_pred             cEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence            9999999999998 699999997641                25999999999987    68999999999998855 32


Q ss_pred             hH-HHHHHHH--------HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHhc-------
Q 019049          133 AF-GTSHVAL--------VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLKSL-------  193 (347)
Q Consensus       133 ~~-~~a~~~l--------~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~---~V~~~~~~~~~~~~~~~~-------  193 (347)
                      ++ .+++.++        ...+++++|++|+|+|++|++|++++|+|+.+|+   +|++++.+++|++.++++       
T Consensus       150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~  229 (410)
T cd08238         150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS  229 (410)
T ss_pred             HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence            21 1233332        2457889999999999889999999999999864   799999999999999987       


Q ss_pred             -CCc-EEEeCCC-CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC-CC-CCCcchhHhhh
Q 019049          194 -GVD-HVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS-GE-IPVIPANIALV  267 (347)
Q Consensus       194 -g~~-~v~~~~~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~  267 (347)
                       |++ .++++.+ .++   .+.+.+.+.+.++|++||++|. ..+..++++++++|+++.++... .. ...++...++.
T Consensus       230 ~Ga~~~~i~~~~~~~~---~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~  306 (410)
T cd08238         230 RGIELLYVNPATIDDL---HATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY  306 (410)
T ss_pred             cCceEEEECCCccccH---HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence             666 5666654 344   5556677777899999999986 67788999999999888765432 11 12355566788


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +++++.|+....         ...++++++++.+|++++  .++++|+|+++++|++.+. ++..||+|+.++
T Consensus       307 ~~~~i~g~~~~~---------~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         307 NNTHYVGTSGGN---------TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             cCcEEEEeCCCC---------HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            999999976433         367889999999999997  5899999999999999999 777899999874

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3.8e-42  Score=310.16  Aligned_cols=308  Identities=22%  Similarity=0.307  Sum_probs=242.7

Q ss_pred             CCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC--CCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE
Q 019049           20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG   97 (347)
Q Consensus        20 ~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   97 (347)
                      ..+.+.+++.+.|++++++||+|||.|+|+|+.|........  .....+|.++|||++|+|+++|+++++|++||+|++
T Consensus        19 ~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   98 (345)
T cd08293          19 VAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS   98 (345)
T ss_pred             CccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence            344566678999983249999999999999999964332111  111246788999999999999999999999999998


Q ss_pred             ecCCCcceeeEeeeCCCeeeCCCCCCHHH----HccCcchHHHHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHH
Q 019049           98 FAALGSFAQFIVADQSELFPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGK  171 (347)
Q Consensus        98 ~~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~~--~~VlI~g~~g~~G~~~~~la~  171 (347)
                      +.  ++|++|++++++.++++|+++++.+    +++++.++.|||+++...++++++  ++|||+|++|++|++++|+|+
T Consensus        99 ~~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk  176 (345)
T cd08293          99 FN--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGR  176 (345)
T ss_pred             cC--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence            64  6899999999999999999854322    456778999999999888888877  999999999999999999999


Q ss_pred             HcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEE
Q 019049          172 VCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       172 ~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~  249 (347)
                      ++|+ +|+++++++++.+.+++ +|+++++++.+.++   .+.+.+.++ .++|++|||+|+..+..++++++++|+++.
T Consensus       177 ~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~---~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~  252 (345)
T cd08293         177 LLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNV---AERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIIL  252 (345)
T ss_pred             HcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCH---HHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEE
Confidence            9999 89999999999999876 99999999887776   455555554 689999999998878899999999999999


Q ss_pred             EeecCCC---CC---Ccc--hhH-hhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHH
Q 019049          250 IGFASGE---IP---VIP--ANI-ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA  320 (347)
Q Consensus       250 ~g~~~~~---~~---~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a  320 (347)
                      +|.....   ..   ...  ... ...+++++..+....    .+....+.++++++++.+|.+++.....++++++++|
T Consensus       253 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A  328 (345)
T cd08293         253 CGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLN----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEA  328 (345)
T ss_pred             EeeeecccCccCccccccchhHHHhhhcceEEEEEEeec----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHH
Confidence            9853221   10   111  011 123344443332211    2233456788899999999999776666799999999


Q ss_pred             HHHHHcCCcceeEEEEe
Q 019049          321 FSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       321 ~~~~~~~~~~gk~vv~~  337 (347)
                      ++.+.+++..||+|+++
T Consensus       329 ~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         329 FQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHhcCCCCCeEEEEC
Confidence            99999999999999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=305.79  Aligned_cols=329  Identities=29%  Similarity=0.404  Sum_probs=277.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..++.+..         ..+++.+.|. +.++||+|++.++++|+.|+....+.++.....|.++|+|++|+|+
T Consensus         2 m~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   71 (334)
T PTZ00354          2 MRAVTLKGFGGVDV---------LKIGESPKPA-PKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVE   71 (334)
T ss_pred             cEEEEEEecCCCcc---------eEEEeCCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEE
Confidence            99999998887632         3334667777 4899999999999999999999887665444567789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|+++.++++||+|+++..+|+|++|++++.++++++|+++++.+++.++.++.+||+++...++++++++|+|+|++|
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g  151 (334)
T PTZ00354         72 DVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS  151 (334)
T ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            99999999999999999866799999999999999999999999999999999999999998778999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      ++|++++++|+.+|+++++++.++++.+.++++|++.+++....+ +   .+.+.+.+++.++|+++||.|+..+..+++
T Consensus       152 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~  228 (334)
T PTZ00354        152 GVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGF---APKVKKLTGEKGVNLVLDCVGGSYLSETAE  228 (334)
T ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHH---HHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence            999999999999999988899999999999999998888876543 4   555666777778999999999888889999


Q ss_pred             ccccCCEEEEEeecCCCCCC-cchhHhhhcceEEEEEEecc-ccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhH
Q 019049          240 LLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGS-YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEA  317 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~  317 (347)
                      +++++|+++.++...+.... ++...++.++.++.++.... .....+....+.++++++++.++.+++.+.+.++++++
T Consensus       229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  308 (334)
T PTZ00354        229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEV  308 (334)
T ss_pred             HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHH
Confidence            99999999999855432211 44444566777888876544 22234445556778889999999998778889999999


Q ss_pred             HHHHHHHHcCCcceeEEEEeCCCCC
Q 019049          318 NLAFSAIEDRKVIGKVMIAFDDMKS  342 (347)
Q Consensus       318 ~~a~~~~~~~~~~gk~vv~~~~~~~  342 (347)
                      +++++.+.+++..||+|+++.++-+
T Consensus       309 ~~~~~~~~~~~~~~kvvv~~~~~~~  333 (334)
T PTZ00354        309 AEAHTFLEQNKNIGKVVLTVNEPLS  333 (334)
T ss_pred             HHHHHHHHhCCCCceEEEecCCCCC
Confidence            9999999988888999998866543

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.9e-42  Score=309.44  Aligned_cols=310  Identities=30%  Similarity=0.395  Sum_probs=250.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCc-ccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF-VPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~-~~G~e~~G~V   79 (347)
                      |+++++..++..           ..+++.+.|. ++|+||+|||.++|||+||++.+++..+... .|. ++|||++|+|
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~-~~~~i~GHE~~G~V   67 (350)
T COG1063           1 MKAAVVYVGGGD-----------VRLEEPPPPI-PGPGDVLIRVTATGICGSDLHIYRGGEPFVP-PGDIILGHEFVGEV   67 (350)
T ss_pred             CceeEEEecCCc-----------cccccCCCCC-CCCCeEEEEEEEEeEchhhhhhccCCCCCCC-CCCcccCccceEEE
Confidence            888888887754           2156777774 6999999999999999999999999765432 333 8999999999


Q ss_pred             EEeCCCCCCCCCCCEEEE---------------------------ec-----CCCcceeeEeeeCCCeee-CCCCCCHHH
Q 019049           80 DAVGPNVSNFKVGDTVCG---------------------------FA-----ALGSFAQFIVADQSELFP-VPKGCDLLA  126 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~---------------------------~~-----~~g~~~~~~~~~~~~~~~-~p~~~~~~~  126 (347)
                      +++| .++.+++||||..                           ..     .+|+|+||+.+|.+++++ +|+++ ..+
T Consensus        68 ~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~  145 (350)
T COG1063          68 VEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEE  145 (350)
T ss_pred             EEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-Chh
Confidence            9999 7788999999930                           00     258999999999866555 58888 556


Q ss_pred             HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCC
Q 019049          127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNE  204 (347)
Q Consensus       127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~  204 (347)
                      ++++..++.++|++........++++|+|.|+ |++|++++++++..|+ +|++++.+++|++.+++ .|++.+.+....
T Consensus       146 ~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~  224 (350)
T COG1063         146 AAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED  224 (350)
T ss_pred             hhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc
Confidence            66677999999887545555566669999999 9999999999999998 89999999999999998 666666655444


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      ..   ...+.+.+++.++|++|||+|.+ .+..++++++++|+++.+|........++...++.|++++.|+.....   
T Consensus       225 ~~---~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~---  298 (350)
T COG1063         225 DA---GAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSG---  298 (350)
T ss_pred             cH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCC---
Confidence            33   66777888888999999999974 578999999999999999988765434667788999999999843111   


Q ss_pred             CchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCc-ceeEEEEe
Q 019049          284 RPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV-IGKVMIAF  337 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~  337 (347)
                           ...++..++++.+|++++  .+++.+++++++++|+.+.+++. .-|+++.+
T Consensus       299 -----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         299 -----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             -----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence                 357899999999999996  37889999999999999998654 45887753

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=5.3e-42  Score=310.91  Aligned_cols=312  Identities=24%  Similarity=0.341  Sum_probs=258.6

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+++.++++.           +.+++.+.|. |+++||+|++.++++|++|+....|.++. ..+|.++|||++|+|++
T Consensus         2 ka~~~~~~~~~-----------l~~~~~~~p~-~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~   68 (361)
T cd08231           2 RAAVLTGPGKP-----------LEIREVPLPD-LEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVA   68 (361)
T ss_pred             eEEEEcCCCCC-----------CEEEeccCCC-CCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEE
Confidence            78999988843           4456899999 59999999999999999999999887643 45688999999999999


Q ss_pred             eCCCCCC------CCCCCEEEEec----------------------------------CCCcceeeEeeeCC-CeeeCCC
Q 019049           82 VGPNVSN------FKVGDTVCGFA----------------------------------ALGSFAQFIVADQS-ELFPVPK  120 (347)
Q Consensus        82 vG~~v~~------~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~  120 (347)
                      +|+++++      |++||+|+.+.                                  ..|+|++|++++++ .++++|+
T Consensus        69 vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~  148 (361)
T cd08231          69 LGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPD  148 (361)
T ss_pred             eCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCC
Confidence            9999986      99999998761                                  25899999999996 7999999


Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEE
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV  199 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~  199 (347)
                      ++++++++.++++++|||+++......+++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++
T Consensus       149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi  227 (361)
T cd08231         149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI  227 (361)
T ss_pred             CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence            99999999999999999999977777779999999986 9999999999999999 999999999999999999999998


Q ss_pred             eCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEe
Q 019049          200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYW  277 (347)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  277 (347)
                      +++.....+....+.+.+++.++|++|||+|+ ..+..++++++++|+++.+|..... ....+...++.++.++.++..
T Consensus       228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (361)
T cd08231         228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN  307 (361)
T ss_pred             cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence            87765542223456677777899999999986 5678899999999999999865422 122333446788999888764


Q ss_pred             ccccccCchhHHHHHHHHHHHHHcC--ce--eeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          278 GSYKIHRPHVLEDSLRELLLWAAKG--LI--TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~l~~g--~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .+         .+.+++.++++.++  .+  .+.+.++|+++++++||+.+.++.. +|+||.+
T Consensus       308 ~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         308 YD---------PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             CC---------chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            33         24566777777776  33  3457889999999999999988774 7998853

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=5.9e-42  Score=306.20  Aligned_cols=296  Identities=21%  Similarity=0.297  Sum_probs=243.9

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCc
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS  103 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~  103 (347)
                      +..++.+.|+ |++|||+|||.|+++|+.+..   |.+.. ...|.++|.|++|+|.++|+   +|++||+|+++   ++
T Consensus        19 l~~~~~~~p~-~~~~evlv~v~a~~~n~~~~~---g~~~~-~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---~~   87 (325)
T TIGR02825        19 FELKTVELPP-LNNGEVLLEALFLSVDPYMRV---AAKRL-KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---PG   87 (325)
T ss_pred             eEEEeccCCC-CCCCcEEEEEEEEecCHHHhc---ccCcC-CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe---cC
Confidence            4556799999 699999999999999996543   33322 23477999999999999773   69999999986   46


Q ss_pred             ceeeEeeeCCCeeeC----CCCCCHHHH-ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEE
Q 019049          104 FAQFIVADQSELFPV----PKGCDLLAA-AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII  178 (347)
Q Consensus       104 ~~~~~~~~~~~~~~~----p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~  178 (347)
                      |++|++++.+.+.++    |++++++++ +++++++.|||+++...+++++|++|||+|++|++|++++|+|+..|++|+
T Consensus        88 ~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi  167 (325)
T TIGR02825        88 WTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVV  167 (325)
T ss_pred             ceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEE
Confidence            999999999888777    999999997 678999999999998889999999999999999999999999999999999


Q ss_pred             EEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCC---
Q 019049          179 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG---  255 (347)
Q Consensus       179 ~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~---  255 (347)
                      ++++++++.++++++|+++++++.+.+.   ..+..+.+.++++|++|||+|++.+..++++++++|+++.+|....   
T Consensus       168 ~~~~s~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~  244 (325)
T TIGR02825       168 GAAGSDEKVAYLKKLGFDVAFNYKTVKS---LEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNR  244 (325)
T ss_pred             EEeCCHHHHHHHHHcCCCEEEecccccc---HHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhccc
Confidence            9999999999999999999999876433   2333333445689999999999888999999999999999986532   


Q ss_pred             --CCCC-cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCccee
Q 019049          256 --EIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK  332 (347)
Q Consensus       256 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk  332 (347)
                        ..+. .....++.+++++.++....+   .+....+.++++++++.+|++++.+...|+++++++|++.+.+++..||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gk  321 (325)
T TIGR02825       245 TGPLPPGPPPEIVIYQELRMEGFIVNRW---QGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGK  321 (325)
T ss_pred             CCCCCCCcchHHHhhhcceEeEEEehhh---hhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCe
Confidence              1111 123345667888888765332   2223356788999999999999877788999999999999999999999


Q ss_pred             EEEE
Q 019049          333 VMIA  336 (347)
Q Consensus       333 ~vv~  336 (347)
                      +|++
T Consensus       322 vVv~  325 (325)
T TIGR02825       322 TIVK  325 (325)
T ss_pred             EEeC
Confidence            9974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7e-42  Score=306.66  Aligned_cols=304  Identities=25%  Similarity=0.353  Sum_probs=259.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++..           ..++++|.|++ +++||+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~   67 (333)
T cd08296           1 YKAVQVTEPGGP-----------LELVERDVPLP-GPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRID   67 (333)
T ss_pred             CeEEEEccCCCC-----------ceEEeccCCCC-CCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEE
Confidence            999999988543           44578999995 8999999999999999999999886543 3457899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE----------------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCG----------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++++++++||+|+.                            +...|++++|+.++.+.++++|+++++++++.+++
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~  147 (333)
T cd08296          68 AVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLC  147 (333)
T ss_pred             EECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhh
Confidence            99999999999999975                            22358999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.++|+++.. .++.++++|+|+| +|++|++++++|+.+|++|+++++++++++.++++|+++++++...++   .+.
T Consensus       148 ~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~  222 (333)
T cd08296         148 AGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDV---AEA  222 (333)
T ss_pred             hhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccH---HHH
Confidence            99999999854 5899999999999 599999999999999999999999999999999999999998877665   333


Q ss_pred             HHHHhcCCcccEEEeCCC-ccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      +.+.   .++|+++|++| +..+..++++++++|+++.+|..... ..++...++.+++++.++....         ...
T Consensus       223 ~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~---------~~~  289 (333)
T cd08296         223 LQEL---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEP-VAVSPLQLIMGRKSIHGWPSGT---------ALD  289 (333)
T ss_pred             HHhc---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCC-CCcCHHHHhhcccEEEEeCcCC---------HHH
Confidence            3333   36999999987 46778899999999999999876532 2344456678999999976433         356


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      ++.+++++.++.+++.+ ..|+++++.+||+.+.+++..||+|++
T Consensus       290 ~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         290 SEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            77888889999888665 589999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.3e-42  Score=310.09  Aligned_cols=294  Identities=16%  Similarity=0.183  Sum_probs=231.5

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC---CCCCcccCCceeEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---PPLPFVPGSDYSGT   78 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~---~~~p~~~G~e~~G~   78 (347)
                      |+.+++.++..            .+++.+.| . +++||+|||.++|||++|++.+.|.+...   ..+|.++|||++|+
T Consensus         4 ~~~~~~~~~~~------------~~~~~~~P-~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~   69 (341)
T cd08237           4 QVYRLVRPKFF------------EVTYEEEN-L-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGV   69 (341)
T ss_pred             cceEEeccceE------------EEeecCCC-C-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEE
Confidence            46666666643            33678888 3 89999999999999999999998865321   35799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchH
Q 019049           79 VDAVGPNVSNFKVGDTVCGF------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAF  134 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~  134 (347)
                      |+++|.+  +|++||||+..                        ..+|+|+||++++++.++++|+++++++|| +..++
T Consensus        70 V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~  146 (341)
T cd08237          70 VVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELV  146 (341)
T ss_pred             EEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchH
Confidence            9998764  79999999753                        235899999999999999999999999877 44689


Q ss_pred             HHHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHH-cC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          135 GTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKV-CG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       135 ~~a~~~l~~~--~~~~~~~~VlI~g~~g~~G~~~~~la~~-~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      +++|+++...  +.+++|++|+|.|+ |++|++++|+++. .| ++|++++++++|++.+++.+++..++    ++    
T Consensus       147 ~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~----  217 (341)
T cd08237         147 SVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DI----  217 (341)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hh----
Confidence            9999998543  45688999999997 9999999999986 55 58999999999999998866543221    11    


Q ss_pred             HHHHHHhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCch
Q 019049          211 KEFLKARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH  286 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (347)
                            ....++|++|||+|+    ..+..++++++++|+++.+|..... ..++...++.+++++.++....       
T Consensus       218 ------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~~-------  283 (341)
T cd08237         218 ------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYP-VPINTRMVLEKGLTLVGSSRST-------  283 (341)
T ss_pred             ------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCC-cccCHHHHhhCceEEEEecccC-------
Confidence                  112369999999995    3578899999999999999975433 2345556788999999976432       


Q ss_pred             hHHHHHHHHHHHHHcC-----ceeeeeceeeChh---hHHHHHHHHHcCCcceeEEEEeC
Q 019049          287 VLEDSLRELLLWAAKG-----LITIHISHTYSPS---EANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       287 ~~~~~~~~~~~~l~~g-----~l~~~~~~~~~~~---~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                        .+.++++++++.++     .+++.++++|+++   ++.++|+.+.++ ..||+|++++
T Consensus       284 --~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         284 --REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             --HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence              35688899999998     4556788999985   566666655544 6789999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.7e-42  Score=305.31  Aligned_cols=291  Identities=18%  Similarity=0.202  Sum_probs=232.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCC-hhhHHHHhccCCCC--CCCCcccCCceeE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN-YANYLQILGKYQEK--PPLPFVPGSDYSG   77 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~-~~d~~~~~g~~~~~--~~~p~~~G~e~~G   77 (347)
                      |||+++.+++.            +.+++.+.|+ |+++||+|||.++++| ++|++.+.|.++..  ..+|.++|||++|
T Consensus         2 ~ka~~~~~~~~------------l~~~e~~~p~-~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G   68 (308)
T TIGR01202         2 TQAIVLSGPNQ------------IELREVTLTP-PSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVG   68 (308)
T ss_pred             ceEEEEeCCCe------------EEEEEecCCC-CCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEE
Confidence            78999987654            3346899999 6999999999999996 69999888876432  2579999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEec---------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCC
Q 019049           78 TVDAVGPNVSNFKVGDTVCGFA---------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS  148 (347)
Q Consensus        78 ~V~~vG~~v~~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~  148 (347)
                      +|+++|+++ +|++||||+...         ..|+|+||++++++.++++|++++++. +++ ..+.|||+++.. . ..
T Consensus        69 ~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~  143 (308)
T TIGR01202        69 RVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EV  143 (308)
T ss_pred             EEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-cc
Confidence            999999998 699999998532         149999999999999999999999864 444 457899999854 3 33


Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++++++|+|+ |++|++++|+|+.+|++ |++++.+++|++.+.+.   .++|+.+.             .+.++|++||
T Consensus       144 ~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-------------~~~g~Dvvid  206 (308)
T TIGR01202       144 KVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-------------PRRDYRAIYD  206 (308)
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-------------cCCCCCEEEE
Confidence            6889999986 99999999999999997 55666666676655543   34443211             2457999999


Q ss_pred             CCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049          228 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                      |+|++ .+..++++++++|+++.+|..... ..++...++.+++++.++....         .+.++++++++.+|++++
T Consensus       207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~l~~~g~i~~  276 (308)
T TIGR01202       207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRIAAEWQ---------PGDLHAVRELIESGALSL  276 (308)
T ss_pred             CCCCHHHHHHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEEecccc---------hhHHHHHHHHHHcCCCCh
Confidence            99985 578999999999999999976533 2344556678888888765332         467899999999999986


Q ss_pred             --eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          307 --HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       307 --~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                        .++++|+|+|+++||+.+.++...+|++++
T Consensus       277 ~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       277 DGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             hhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence              489999999999999998877777899874

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5.5e-41  Score=300.07  Aligned_cols=320  Identities=34%  Similarity=0.468  Sum_probs=270.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (347)
                      |||+++.+++.+..        +.+ .+.+.|. +.++||+|++.++++|++|+....|..+.  ....|.++|||++|+
T Consensus         1 ~~a~~~~~~~~~~~--------~~~-~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~   70 (324)
T cd08244           1 MRAIRLHEFGPPEV--------LVP-EDVPDPV-PGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGV   70 (324)
T ss_pred             CeEEEEcCCCCccc--------eEE-eccCCCC-CCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEE
Confidence            99999988776532        233 4566677 48999999999999999999988776432  234578899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecC--CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049           79 VDAVGPNVSNFKVGDTVCGFAA--LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      |+++|++++.+++||+|++...  .|+|++|+.++.+.++++|+++++++++.+++.+.+|| ++...++++++++|+|+
T Consensus        71 v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~  149 (324)
T cd08244          71 VDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVT  149 (324)
T ss_pred             EEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEE
Confidence            9999999999999999999762  58999999999999999999999999999999999995 55578899999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHH
Q 019049          157 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE  236 (347)
Q Consensus       157 g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  236 (347)
                      |++|++|.+++++|+.+|++|+++++++++.+.++++|++.+++..+.++   .+.+.+.+++.++|+++||+|+.....
T Consensus       150 g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~g~~~~~~  226 (324)
T cd08244         150 AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDW---PDQVREALGGGGVTVVLDGVGGAIGRA  226 (324)
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccH---HHHHHHHcCCCCceEEEECCChHhHHH
Confidence            99999999999999999999999999999999999999998888877666   556666677778999999999887888


Q ss_pred             HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhh
Q 019049          237 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  316 (347)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~  316 (347)
                      ++++++++|+++.+|.........+....+.++.++.++.....   .+....+.++++++++.++.+++.+.+.|++++
T Consensus       227 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  303 (324)
T cd08244         227 ALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQA---ERGGLRALEARALAEAAAGRLVPVVGQTFPLER  303 (324)
T ss_pred             HHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccC---CHHHHHHHHHHHHHHHHCCCccCccceEEeHHH
Confidence            99999999999999876533223343455788889888775432   223445788889999999999877888999999


Q ss_pred             HHHHHHHHHcCCcceeEEEEe
Q 019049          317 ANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       317 ~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++.+.++...||+++++
T Consensus       304 ~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         304 AAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.1e-41  Score=304.76  Aligned_cols=308  Identities=29%  Similarity=0.461  Sum_probs=261.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (347)
                      |||+++.++|++           ..+.+.+.|.+ .++||+|++.++++|++|+....|.++.  ...+|.++|+|++|+
T Consensus         1 ~ka~~~~~~~~~-----------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~   68 (340)
T cd05284           1 MKAARLYEYGKP-----------LRLEDVPVPEP-GPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGW   68 (340)
T ss_pred             CeeeEeccCCCC-----------ceEEeCCCCCC-CCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEE
Confidence            899999988754           44457888884 8999999999999999999998887652  345688999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  131 (347)
                      |+++|+++.++++||+|+++.                           ..|+|++|+.++.++++++|+++++++++.++
T Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~  148 (340)
T cd05284          69 VEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLA  148 (340)
T ss_pred             EEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhc
Confidence            999999999999999998763                           25899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049          132 VAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  209 (347)
Q Consensus       132 ~~~~~a~~~l~~~-~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (347)
                      ..+.|||+++... ..+.++++|||+|+ |++|++++|+|+.+| .+|+++++++++.+.++++|+++++++... +   
T Consensus       149 ~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~---  223 (340)
T cd05284         149 DAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-V---  223 (340)
T ss_pred             chHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-H---
Confidence            9999999998765 46889999999996 779999999999999 799999999999999999999999988765 5   


Q ss_pred             HHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhH
Q 019049          210 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL  288 (347)
Q Consensus       210 ~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      ..++.+.+.+.++|+++||+|+ .....++++++++|+++.+|....  ...+....+.+++++.++....         
T Consensus       224 ~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---------  292 (340)
T cd05284         224 VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT---------  292 (340)
T ss_pred             HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc---------
Confidence            5556666777789999999996 677889999999999999986543  2223333357888888765432         


Q ss_pred             HHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          289 EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       289 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .+.++++++++.++.+++ +.+.|++++++++++.+.+++..||+|+.+
T Consensus       293 ~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         293 RAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            367788999999999886 446799999999999999999999999764

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.3e-41  Score=304.69  Aligned_cols=312  Identities=29%  Similarity=0.433  Sum_probs=261.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-----------------
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-----------------   63 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-----------------   63 (347)
                      ||++++..++.++        .+.+.++.+.|. +.+++|+|||.++++|++|++.+.|.++.                 
T Consensus         1 ~~a~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~   71 (350)
T cd08274           1 MRAVLLTGHGGLD--------KLVYRDDVPVPT-PAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWW   71 (350)
T ss_pred             CeEEEEeccCCcc--------ceeecccCCCCC-CCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccc
Confidence            8999998877652        234444567777 58999999999999999999988775431                 


Q ss_pred             --CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec-------------------CCCcceeeEeeeCCCeeeCCCCC
Q 019049           64 --KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-------------------ALGSFAQFIVADQSELFPVPKGC  122 (347)
Q Consensus        64 --~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~  122 (347)
                        ...+|.++|||++|+|+++|+++++|++||+|+...                   .+|++++|+.++.+.++++|+++
T Consensus        72 ~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~  151 (350)
T cd08274          72 GGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPL  151 (350)
T ss_pred             cCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCC
Confidence              234688999999999999999999999999998731                   24899999999999999999999


Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS  202 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~  202 (347)
                      ++.+++++++.+.+||+++ ...+++++++|||+|++|++|++++++|+.+|+++++++.+. +++.++++|++.+++..
T Consensus       152 ~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~  229 (350)
T cd08274         152 SDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRD  229 (350)
T ss_pred             CHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCC
Confidence            9999999999999999988 778999999999999999999999999999999999998765 88888999987666544


Q ss_pred             CCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc
Q 019049          203 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  282 (347)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      ....    .+ ...+.+.++|++|||+|++.+..++++++++|+++.+|.........+...++.++.++.++....   
T Consensus       230 ~~~~----~~-~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  301 (350)
T cd08274         230 APLL----AD-AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT---  301 (350)
T ss_pred             CccH----HH-HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC---
Confidence            3332    23 455677789999999999888999999999999999986543322344455578888888877532   


Q ss_pred             cCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                            .+.++++++++.++.+++.+.+.|++++++++++.+.++...||+|+.+
T Consensus       302 ------~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         302 ------REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             ------HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence                  4778999999999999877889999999999999999988889999853

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=8.9e-42  Score=300.88  Aligned_cols=311  Identities=34%  Similarity=0.453  Sum_probs=253.6

Q ss_pred             eeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCC---CCCcccCCcee---EEEEEeC-CCCCCCCCCCEE
Q 019049           23 IVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP---PLPFVPGSDYS---GTVDAVG-PNVSNFKVGDTV   95 (347)
Q Consensus        23 ~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~---~~p~~~G~e~~---G~V~~vG-~~v~~~~~Gd~V   95 (347)
                      +.+.++.+.|. |.++|++|++.++++||.|+.+..|.++...   .+|.+++.++.   |.+...| ..+.....||.+
T Consensus        19 ~~~~~~~~iP~-~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~   97 (347)
T KOG1198|consen   19 VLFSEEVPIPE-PEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV   97 (347)
T ss_pred             eEEeecccCCC-CCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence            48888999999 6999999999999999999999999887655   67865555554   4455556 345668888888


Q ss_pred             EEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc------CCCCCCEEEEecCCchHHHHHHHH
Q 019049           96 CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA------QLSSGQVLLVLGAAGGVGVAAVQI  169 (347)
Q Consensus        96 ~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~~~~~VlI~g~~g~~G~~~~~l  169 (347)
                      +.....|+|+||++++...++++|+++++.+||++|.++.|||.++.+..      ++++|++|||+||+|++|++++|+
T Consensus        98 ~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQl  177 (347)
T KOG1198|consen   98 VAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQL  177 (347)
T ss_pred             eeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHH
Confidence            88888999999999999999999999999999999999999999999999      999999999999999999999999


Q ss_pred             HHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEE
Q 019049          170 GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       170 a~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~  249 (347)
                      |++.++..+++++++++.++++++|+++++||++.++   .+.+.+.+ +.+||+||||+|+........++...|+...
T Consensus       178 Ak~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~---~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~  253 (347)
T KOG1198|consen  178 AKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENV---VELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLLKGGGGAY  253 (347)
T ss_pred             HHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHH---HHHHHhhc-CCCccEEEECCCCCccccchhhhccCCceEE
Confidence            9999976666777788999999999999999999877   77777777 8899999999999888888888888887666


Q ss_pred             EeecCCCCCCcchh----HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHH
Q 019049          250 IGFASGEIPVIPAN----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE  325 (347)
Q Consensus       250 ~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~  325 (347)
                      ++............    .+........+....++.+.......+.++.+.+++.+|++++.+.+.||++++.+|++++.
T Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~  333 (347)
T KOG1198|consen  254 IGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLE  333 (347)
T ss_pred             EEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHh
Confidence            65444322111111    01111111122222222222233336889999999999999999999999999999999999


Q ss_pred             cCCcceeEEEEeC
Q 019049          326 DRKVIGKVMIAFD  338 (347)
Q Consensus       326 ~~~~~gk~vv~~~  338 (347)
                      ++...||++++++
T Consensus       334 ~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  334 KSHATGKVVLEKD  346 (347)
T ss_pred             hcCCcceEEEEec
Confidence            9999999999875

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=8.2e-41  Score=299.30  Aligned_cols=321  Identities=26%  Similarity=0.326  Sum_probs=265.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++.++|.++.         ..+++++.|. |+++||+|++.++++|++|++...|.++. ..+|.++|||++|+|+
T Consensus         2 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~   70 (327)
T PRK10754          2 AKRIEFHKHGGPEV---------LQAVEFTPAD-PAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVS   70 (327)
T ss_pred             ceEEEEeccCChhH---------eEEeeccCCC-CCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEE
Confidence            89999999988753         4455788898 59999999999999999999988776643 2357789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      .+|++++++++||+|+... ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++...+.+++|++|+|+|++
T Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  150 (327)
T PRK10754         71 KVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA  150 (327)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCC
Confidence            9999999999999998653 358999999999999999999999999999999999999998778899999999999998


Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      |.+|++++|+++.+|++|++++.++++++.++++|++++++....++   .+.+.+.+.+.++|+++||+|+.....+++
T Consensus       151 g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~  227 (327)
T PRK10754        151 GGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENI---VERVKEITGGKKVRVVYDSVGKDTWEASLD  227 (327)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcH---HHHHHHHcCCCCeEEEEECCcHHHHHHHHH
Confidence            99999999999999999999999999999999999999988776665   556677778889999999999888888999


Q ss_pred             ccccCCEEEEEeecCCCCCCcchhHhhhcceEE-EEEEeccccccCchhHHHHHHHHHHHHHcCceeee--eceeeChhh
Q 019049          240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTV-HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSE  316 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~  316 (347)
                      +++++|+++.+|.........+...+..++..+ .......+ ..++....+.++.+++++.+|.+++.  +.+.|++++
T Consensus       228 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~  306 (327)
T PRK10754        228 CLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKD  306 (327)
T ss_pred             HhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHH
Confidence            999999999998665322222322222332221 11111111 22344455677889999999999864  578999999


Q ss_pred             HHHHHHHHHcCCcceeEEEE
Q 019049          317 ANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       317 ~~~a~~~~~~~~~~gk~vv~  336 (347)
                      ++++++.+.++...+|+|+.
T Consensus       307 ~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        307 AQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHHHHcCCCcceEEEe
Confidence            99999999999999999985

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-40  Score=298.81  Aligned_cols=315  Identities=26%  Similarity=0.329  Sum_probs=256.0

Q ss_pred             ceEEeccc---CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049            2 EALVCRKL---GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (347)
Q Consensus         2 ~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~   78 (347)
                      ||+++.++   +.++.         +...+.|.|. |+++||+|+|.++++|++|+..+.+..+. ..+|.++|+|++|+
T Consensus         1 ~~~~~~~~~~~~~~~~---------~~~~~~~~p~-~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~   69 (336)
T TIGR02817         1 KAVGYKKPLPITDPDA---------LVDIDLPKPK-PGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGV   69 (336)
T ss_pred             CceeeccccCCCCccc---------ceecccCCCC-CCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEE
Confidence            68999997   65543         5566889999 59999999999999999999988775432 34678899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCC-----C
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----G  150 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~  150 (347)
                      |+++|+++++|++||+|+++.   ..|+|++|++++.+.++++|+++++++++.+++.+.|||+++...+++++     |
T Consensus        70 V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g  149 (336)
T TIGR02817        70 VVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDK  149 (336)
T ss_pred             EEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            999999999999999999874   35899999999999999999999999999999999999999988888887     9


Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++++|+++++++.. ++   .+.+.+ ..+.++|+++|++
T Consensus       150 ~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~---~~~i~~-~~~~~vd~vl~~~  224 (336)
T TIGR02817       150 RALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PL---KAQLEK-LGLEAVSYVFSLT  224 (336)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CH---HHHHHH-hcCCCCCEEEEcC
Confidence            99999999999999999999998 999999999999999999999999998654 44   333333 4556899999998


Q ss_pred             Cc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEec-cccccCchhH--HHHHHHHHHHHHcCcee
Q 019049          230 GG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG-SYKIHRPHVL--EDSLRELLLWAAKGLIT  305 (347)
Q Consensus       230 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~g~l~  305 (347)
                      ++ .....++++++++|+++.++...    ..+...+..++.++.+..+. ......+...  .+.++++++++.++.++
T Consensus       225 ~~~~~~~~~~~~l~~~G~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  300 (336)
T TIGR02817       225 HTDQHFKEIVELLAPQGRFALIDDPA----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR  300 (336)
T ss_pred             CcHHHHHHHHHHhccCCEEEEEcccc----cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee
Confidence            64 67788999999999999874221    12222334455666654433 1112222222  25788999999999998


Q ss_pred             eeeceee---ChhhHHHHHHHHHcCCcceeEEEE
Q 019049          306 IHISHTY---SPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       306 ~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.+.+.+   +++++++|++.+.+++..||++++
T Consensus       301 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       301 TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            7655555   479999999999999999998875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.8e-40  Score=298.77  Aligned_cols=312  Identities=30%  Similarity=0.454  Sum_probs=265.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++ +..         ..+++++.|. +.++||+|++.++++|++|+..+.+.++.....|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~-~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~   69 (341)
T cd08297           1 MKAAVVEEFG-EKP---------YEVKDVPVPE-PGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVV   69 (341)
T ss_pred             CceEEeeccC-CCC---------ceEEEeeCCC-CCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEE
Confidence            9999999888 221         4446788899 5999999999999999999999888765444557789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++++.+++||+|+.+.                            ..|+|++|+.++.+.++++|+++++.+++.++.
T Consensus        70 ~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~  149 (341)
T cd08297          70 AVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLC  149 (341)
T ss_pred             EeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHc
Confidence            9999999999999998641                            258999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .+.|||+++.. .+++++++|||+|+++++|++++++|+.+|++|+++++++++.+.++++|++.++++.+.++   ...
T Consensus       150 ~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~  225 (341)
T cd08297         150 AGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDD---VEA  225 (341)
T ss_pred             chHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccH---HHH
Confidence            99999999855 58999999999999888999999999999999999999999999999999999998877665   566


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      +.+.+++.++|+++|+.++ .....++++++++|+++.+|.........+...+..++.++.+.....         .+.
T Consensus       226 ~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  296 (341)
T cd08297         226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT---------RQD  296 (341)
T ss_pred             HHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC---------HHH
Confidence            6777777889999997764 677889999999999999986553322333344557888888754332         478


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++++.++.+++.+ ..|++++++++++.+..+...||++++|
T Consensus       297 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         297 LQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            88999999999998644 6799999999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.6e-40  Score=294.95  Aligned_cols=316  Identities=24%  Similarity=0.289  Sum_probs=257.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++.+++++.         ..+++.|.|. ++++||+|++.++++|++|+....|.++....+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (325)
T cd05280           1 FKALVVEEQDGGVS---------LFLRTLPLDD-LPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVV   70 (325)
T ss_pred             CceEEEcccCCCCc---------ceEEeCCCCC-CCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEE
Confidence            99999999987533         4456889999 5999999999999999999999988765444567899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcC--CC-CCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ--LS-SGQ  151 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~--~~-~~~  151 (347)
                      ++  +++.+++||+|++..      .+|+|++|+.++++.++++|+++++++++.+++.+.++|+++.....  +. .++
T Consensus        71 ~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  148 (325)
T cd05280          71 SS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDG  148 (325)
T ss_pred             Ee--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCC
Confidence            98  466899999999853      36899999999999999999999999999999999999999865543  35 357


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|+|+|++|++|++++|+|+.+|++|+++++++++++.++++|++++++..+.     .....+.+..+++|+++||+|+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~d~vi~~~~~  223 (325)
T cd05280         149 PVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL-----LDESKKPLLKARWAGAIDTVGG  223 (325)
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH-----HHHHHHHhcCCCccEEEECCch
Confidence            99999999999999999999999999999999999999999999988875432     1223344455679999999999


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      ..+..++++++++|+++.+|.............++.++.++.++.....   .+....+.++.+.+++..+ +.+.+...
T Consensus       224 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~  299 (325)
T cd05280         224 DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNC---PMELRKQVWQKLATEWKPD-LLEIVVRE  299 (325)
T ss_pred             HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecC---chhHHHHHHHHHHHHHhcC-CccceeeE
Confidence            8889999999999999999865432112333334478888888765432   1223345667777777777 34457889


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      |++++++++++.+.+++..||+|+++
T Consensus       300 ~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         300 ISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             ecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            99999999999999999999999863

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2e-40  Score=303.66  Aligned_cols=318  Identities=26%  Similarity=0.368  Sum_probs=260.5

Q ss_pred             CceEEecc--cCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC------C---CCCCc
Q 019049            1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE------K---PPLPF   69 (347)
Q Consensus         1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~------~---~~~p~   69 (347)
                      |||+++..  +|.+        .....++++|.|.+ +++||+|++.++++|++|++...+....      .   ...+.
T Consensus        13 ~~a~~~~~~~~g~~--------~~~~~~~~~~~p~l-~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~   83 (393)
T cd08246          13 MYAFAIRPERYGDP--------AQAIQLEDVPVPEL-GPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH   83 (393)
T ss_pred             hhheeeecccCCCc--------ccceEEeecCCCCC-CCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence            88988863  3433        12245567899994 9999999999999999999887664110      0   11235


Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCC
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKG  121 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~  121 (347)
                      ++|||++|+|+++|++++.+++||+|+.+.                            ..|+|++|+.++...++++|++
T Consensus        84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~  163 (393)
T cd08246          84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH  163 (393)
T ss_pred             ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCC
Confidence            789999999999999999999999998764                            2489999999999999999999


Q ss_pred             CCHHHHccCcchHHHHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE
Q 019049          122 CDLLAAAALPVAFGTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV  199 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~  199 (347)
                      +++++++.+++++.+||+++...  ++++++++|+|+|++|++|++++++|+.+|++++++++++++++.++++|+++++
T Consensus       164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i  243 (393)
T cd08246         164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI  243 (393)
T ss_pred             CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998654  7889999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCc-------------------hhhHHHHHHHhcCC-cccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCC
Q 019049          200 DLSNESV-------------------IPSVKEFLKARKLK-GVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV  259 (347)
Q Consensus       200 ~~~~~~~-------------------~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  259 (347)
                      +.+..+.                   ....+.+.+.+++. ++|++|||+|+..+..++++++++|+++.+|........
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  323 (393)
T cd08246         244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT  323 (393)
T ss_pred             cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence            8654310                   01145566677776 899999999987788999999999999999865432223


Q ss_pred             cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcC-CcceeEEEE
Q 019049          260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR-KVIGKVMIA  336 (347)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~  336 (347)
                      .....++.++.++.+++...         .+.+..+++++.++.+.+.+.++|++++++++++.+.++ +..||+++-
T Consensus       324 ~~~~~l~~~~~~i~g~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         324 YDNRYLWMRQKRIQGSHFAN---------DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             CcHHHHhhheeEEEecccCc---------HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            34455667788887765443         356788999999999987788899999999999999998 788998864

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3e-40  Score=295.13  Aligned_cols=309  Identities=28%  Similarity=0.431  Sum_probs=267.0

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCc
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS  103 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~  103 (347)
                      ..+++.+.|. ++++||+|++.++++|+.|+..+.+........|.++|+|++|+|+.+|++++++++||+|+++...|+
T Consensus        14 ~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~   92 (323)
T cd05282          14 LELVSLPIPP-PGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGT   92 (323)
T ss_pred             EEeEeCCCCC-CCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCCCCc
Confidence            3345678888 499999999999999999999887766544456789999999999999999999999999999864599


Q ss_pred             ceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          104 FAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       104 ~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      |++|+.++.+.++++|+++++.+++.+++.+.+||+++...+.+.++++|+|+|++|.+|++++++|+.+|+++++++.+
T Consensus        93 ~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~  172 (323)
T cd05282          93 WQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR  172 (323)
T ss_pred             ceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999999999999999999999999999999999998888889999999999999999999999999999999999999


Q ss_pred             hhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchh
Q 019049          184 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN  263 (347)
Q Consensus       184 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  263 (347)
                      +++++.++++|++.++++.+..+   ...+.+.+.+.++|+++||+|+......+++++++|+++.+|.........+..
T Consensus       173 ~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  249 (323)
T cd05282         173 DEQVEELKALGADEVIDSSPEDL---AQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRS  249 (323)
T ss_pred             hHHHHHHHhcCCCEEecccchhH---HHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHH
Confidence            99999999999999998876555   566677777889999999999987788899999999999998665432223333


Q ss_pred             HhhhcceEEEEEEecccccc-CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          264 IALVKNWTVHGLYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      .+..++.++.++....+... +|....+.++++++++.++.+.+.+.+.|++++++++++.+..+...||+|++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         250 VFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            34448999999887665543 66666788999999999999987788899999999999999998888898863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.2e-40  Score=299.14  Aligned_cols=310  Identities=27%  Similarity=0.372  Sum_probs=259.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.+           +..++.+.|. ++++||+||+.++++|++|++...|.++  ..+|.++|||++|+|+
T Consensus         3 ~~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~   68 (365)
T cd08278           3 TTAAVVREPGGP-----------FVLEDVELDD-PRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVE   68 (365)
T ss_pred             cEEeeeccCCCc-----------ceEEEeecCC-CCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEE
Confidence            899999887654           3456888898 5999999999999999999999988764  3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-------------------------------------------------cCCCcceeeEeee
Q 019049           81 AVGPNVSNFKVGDTVCGF-------------------------------------------------AALGSFAQFIVAD  111 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~  111 (347)
                      ++|++++++++||+|+..                                                 ...|+|++|+.++
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~  148 (365)
T cd08278          69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH  148 (365)
T ss_pred             EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence            999999999999999841                                                 1148899999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      +++++++|+++++++++.+++.+.+|++++...+.++++++|+|+|+ |++|++++|+|+..|+ ++++++.+++|.+.+
T Consensus       149 ~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~  227 (365)
T cd08278         149 ERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA  227 (365)
T ss_pred             chhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            99999999999999999999999999999888889999999999976 9999999999999999 689999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHhhhc
Q 019049          191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVK  268 (347)
Q Consensus       191 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~  268 (347)
                      +++|++.++++...++   .+.+.+.+ +.++|+++||+|+ ..+..++++++++|+++.+|.... .....+...++.+
T Consensus       228 ~~~g~~~~i~~~~~~~---~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  303 (365)
T cd08278         228 KELGATHVINPKEEDL---VAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVS  303 (365)
T ss_pred             HHcCCcEEecCCCcCH---HHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhc
Confidence            9999999998877666   45566666 6789999999986 567899999999999999986532 2223444455578


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee-eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI-HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.++.++.....   .+   .+.++++++++.++.+++ .+...|++++++++++.+.+++.. |+|++
T Consensus       304 ~~~~~~~~~~~~---~~---~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         304 GKTIRGVIEGDS---VP---QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             CceEEEeecCCc---Ch---HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            888888764321   11   367788999999999865 355689999999999999887765 77663

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.4e-40  Score=297.93  Aligned_cols=310  Identities=26%  Similarity=0.335  Sum_probs=253.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++..           . +++.+.|. +.++||+|++.++++|++|++...+.+.. ..+|.++|||++|+|+
T Consensus         1 mka~~~~~~~~~-----------~-l~~~~~p~-~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~   66 (351)
T cd08285           1 MKAFAMLGIGKV-----------G-WIEKPIPV-CGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVE   66 (351)
T ss_pred             CceEEEccCCcc-----------E-EEECCCCC-CCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEE
Confidence            999999998854           2 35788888 58999999999999999999988776543 3458899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHHc
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAAA  128 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa  128 (347)
                      ++|++++++++||+|+...                              .+|+|++|+.++.+  .++++|+++++++++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa  146 (351)
T cd08285          67 EVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAV  146 (351)
T ss_pred             EecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhh
Confidence            9999999999999998732                              25899999999974  899999999999999


Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      .++..+.+||+++ ..++++++++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++++|++.++++...++ 
T Consensus       147 ~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-  223 (351)
T cd08285         147 MLPDMMSTGFHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDV-  223 (351)
T ss_pred             hhccchhhHHHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCH-
Confidence            9999999999996 6788999999999975 9999999999999999 5899999999999999999999998877666 


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCC-Ccch--hHhhhcceEEEEEEecccccc
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP-VIPA--NIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~  283 (347)
                        .+.+...+.+.++|+++||+|+ ..+..++++++++|+++.+|....... ..+.  .....+..++.+.....    
T Consensus       224 --~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----  297 (351)
T cd08285         224 --VEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG----  297 (351)
T ss_pred             --HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC----
Confidence              5556666667789999999997 567899999999999999986653211 1121  11123344444432111    


Q ss_pred             CchhHHHHHHHHHHHHHcCceee---eeceeeChhhHHHHHHHHHcCCc-ceeEEEEe
Q 019049          284 RPHVLEDSLRELLLWAAKGLITI---HISHTYSPSEANLAFSAIEDRKV-IGKVMIAF  337 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~  337 (347)
                      .    .+.++++++++.+|++++   .+.+.++++++++|++.+.+++. ..|++++|
T Consensus       298 ~----~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         298 G----RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             c----cccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            1    256788999999999997   35567999999999999999874 67999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=4e-40  Score=300.44  Aligned_cols=309  Identities=26%  Similarity=0.327  Sum_probs=257.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++..            .+++.+.|.+++++||+|++.++++|++|+..+.|.++. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~------------~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~   67 (386)
T cd08283           1 MKALVWHGKGDV------------RVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVE   67 (386)
T ss_pred             CeeEEEecCCCc------------eEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEE
Confidence            999999866543            346788888435999999999999999999999887754 3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----------------------------------------------CCCcceeeEeeeCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA-----------------------------------------------ALGSFAQFIVADQS  113 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~  113 (347)
                      ++|++++++++||+|+...                                               ..|+|++|++++.+
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~  147 (386)
T cd08283          68 EVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFA  147 (386)
T ss_pred             EeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccc
Confidence            9999999999999997642                                               14899999999987


Q ss_pred             --CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          114 --ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       114 --~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                        .++++|++++++++++++..+++||+++ ..+++.++++|+|+|+ |++|.+++++|+..|+ +|+++++++++.+.+
T Consensus       148 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~  225 (386)
T cd08283         148 DVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMA  225 (386)
T ss_pred             cCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence              8999999999999999999999999998 7889999999999976 9999999999999998 599999999999999


Q ss_pred             HhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEeCCCcc----------------------chHHHHhccccCCEE
Q 019049          191 KSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGK----------------------LTKESLKLLNWGAQI  247 (347)
Q Consensus       191 ~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~  247 (347)
                      ++++...++++...+ +   .+.+...+.+.++|++|||+|++                      .+..++++++++|++
T Consensus       226 ~~~~~~~vi~~~~~~~~---~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~i  302 (386)
T cd08283         226 RSHLGAETINFEEVDDV---VEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTV  302 (386)
T ss_pred             HHcCCcEEEcCCcchHH---HHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEE
Confidence            998544677766553 4   55566677777899999999753                      467889999999999


Q ss_pred             EEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHH
Q 019049          248 LVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIE  325 (347)
Q Consensus       248 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~  325 (347)
                      +.+|.........+....+.+++++.+....         ..+.++++++++.++++.+  .+.+.|+++++++|++.+.
T Consensus       303 v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~  373 (386)
T cd08283         303 SIIGVYGGTVNKFPIGAAMNKGLTLRMGQTH---------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD  373 (386)
T ss_pred             EEEcCCCCCcCccCHHHHHhCCcEEEeccCC---------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence            9998765432333444567888888876421         1467888999999999986  3678899999999999998


Q ss_pred             cCC-cceeEEEE
Q 019049          326 DRK-VIGKVMIA  336 (347)
Q Consensus       326 ~~~-~~gk~vv~  336 (347)
                      ++. ..+|+|++
T Consensus       374 ~~~~~~~k~~~~  385 (386)
T cd08283         374 KKEDGCIKVVLK  385 (386)
T ss_pred             hCCCCeEEEEec
Confidence            876 56799985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.8e-40  Score=289.82  Aligned_cols=303  Identities=31%  Similarity=0.374  Sum_probs=254.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++.+++ |+.         ...++.+.|. ++++||+|++.++++|+.|++...+.     ..|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~-~~~---------~~~~~~~~p~-~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~   64 (305)
T cd08270           1 MRALVVDPDA-PLR---------LRLGEVPDPQ-PAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVE   64 (305)
T ss_pred             CeEEEEccCC-Cce---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEE
Confidence            8999998866 532         3345788888 59999999999999999999876521     235689999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|+++.+|++||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.+||+++...... ++++|+|+|++|
T Consensus        65 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~  143 (305)
T cd08270          65 RAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASG  143 (305)
T ss_pred             EeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCc
Confidence            9999999999999999987679999999999999999999999999999999999999998666555 599999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      ++|.+++++++..|++|+++++++++.+.++++|++.+++... +          .+. .++|+++||+|+.....++++
T Consensus       144 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~----------~~~-~~~d~vl~~~g~~~~~~~~~~  211 (305)
T cd08270         144 GVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-E----------LSG-APVDLVVDSVGGPQLARALEL  211 (305)
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-c----------ccC-CCceEEEECCCcHHHHHHHHH
Confidence            9999999999999999999999999999999999876654221 1          112 479999999999888999999


Q ss_pred             cccCCEEEEEeecCCCCCCcchhHhhh--cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHH
Q 019049          241 LNWGAQILVIGFASGEIPVIPANIALV--KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  318 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~  318 (347)
                      ++++|+++.+|.........+...+..  ++.++.++.+..     +....+.++.+++++.++++++.+.+.+++++++
T Consensus       212 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  286 (305)
T cd08270         212 LAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD-----GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEID  286 (305)
T ss_pred             hcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccC-----HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHH
Confidence            999999999986653322334333433  588888877553     3334578899999999999997788899999999


Q ss_pred             HHHHHHHcCCcceeEEEEe
Q 019049          319 LAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       319 ~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++.+.++...||+|+.+
T Consensus       287 ~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         287 EAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999999999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1e-39  Score=299.06  Aligned_cols=324  Identities=27%  Similarity=0.366  Sum_probs=265.5

Q ss_pred             CceEEecc--cCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC---------CCCCC-
Q 019049            1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE---------KPPLP-   68 (347)
Q Consensus         1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~---------~~~~p-   68 (347)
                      ||||++..  +++|.       . ...+++++.|. |+++||+|++.++++|++|++...+....         +...| 
T Consensus         8 ~~a~~~~~~~~~~~~-------~-~~~~~~~~~p~-l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T TIGR01751         8 MYAFAIREERDGDPR-------Q-AIQLEVVPVPE-LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPF   78 (398)
T ss_pred             hhheEEecccCCCcc-------c-ceEEeecCCCC-CCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCc
Confidence            89999965  67652       1 24446789999 59999999999999999998876553210         00223 


Q ss_pred             cccCCceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCC
Q 019049           69 FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPK  120 (347)
Q Consensus        69 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~  120 (347)
                      .++|||++|+|+++|++++++++||+|+...                            ..|+|++|+.++.+.++++|+
T Consensus        79 ~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~  158 (398)
T TIGR01751        79 HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPK  158 (398)
T ss_pred             eecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCC
Confidence            3799999999999999999999999998753                            248999999999999999999


Q ss_pred             CCCHHHHccCcchHHHHHHHHHH--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE
Q 019049          121 GCDLLAAAALPVAFGTSHVALVH--RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV  198 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v  198 (347)
                      ++++++++.++..+.+||+++..  .+++.++++|+|+|++|++|++++|+|+.+|+++++++.++++.+.++++|++.+
T Consensus       159 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~  238 (398)
T TIGR01751       159 HLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAV  238 (398)
T ss_pred             CCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEE
Confidence            99999999999999999999854  4778999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCc-------------------hhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCC
Q 019049          199 VDLSNESV-------------------IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV  259 (347)
Q Consensus       199 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  259 (347)
                      +|.++.+.                   ....+.+.+.+.+.++|++|||+|...+..++++++++|+++.+|........
T Consensus       239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  318 (398)
T TIGR01751       239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD  318 (398)
T ss_pred             ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence            98754310                   01234556677778899999999987788899999999999999876543233


Q ss_pred             cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      .+...++.++.++.++....         .+.++++++++.++.+.+.+.+++++++++++++.+.++...||+|+++..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~  389 (398)
T TIGR01751       319 YDNRYLWMRQKRIQGSHFAN---------LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA  389 (398)
T ss_pred             cCHHHHhhcccEEEccccCc---------HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence            44455566777777765433         245678999999999998788999999999999999999999999999876


Q ss_pred             CCC
Q 019049          340 MKS  342 (347)
Q Consensus       340 ~~~  342 (347)
                      ...
T Consensus       390 ~~~  392 (398)
T TIGR01751       390 PRP  392 (398)
T ss_pred             CCC
Confidence            543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-40  Score=298.42  Aligned_cols=310  Identities=32%  Similarity=0.495  Sum_probs=262.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||||++.++|.+           +.+++.|.|. ++++||+|++.++++|++|+....+.++.  .+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~   66 (367)
T cd08263           1 MKAAVLKGPNPP-----------LTIEEIPVPR-PKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVV   66 (367)
T ss_pred             CeeEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEE
Confidence            999999988754           3346788888 58999999999999999999988876643  567899999999999


Q ss_pred             EeCCCCCC---CCCCCEEEEe-------------------------------------------------cCCCcceeeE
Q 019049           81 AVGPNVSN---FKVGDTVCGF-------------------------------------------------AALGSFAQFI  108 (347)
Q Consensus        81 ~vG~~v~~---~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~  108 (347)
                      .+|+++++   +++||+|++.                                                 ...|++++|+
T Consensus        67 ~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  146 (367)
T cd08263          67 EVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYA  146 (367)
T ss_pred             EeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEE
Confidence            99999988   9999999872                                                 1258999999


Q ss_pred             eeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhH
Q 019049          109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKI  187 (347)
Q Consensus       109 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~  187 (347)
                      .++.+.++++|+++++.+++.++..++|||+++...+.+.++++|+|+| +|++|.+++++|+..|++ |++++.++++.
T Consensus       147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~  225 (367)
T cd08263         147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKL  225 (367)
T ss_pred             EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            9999999999999999999999999999999998888889999999996 599999999999999997 99999999999


Q ss_pred             HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC-CCCcchhHh
Q 019049          188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIPANIA  265 (347)
Q Consensus       188 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~  265 (347)
                      +.++++|++.+++.+..++   ..++.+.+.+.++|+++|++++. ....++++++++|+++.++..... ........+
T Consensus       226 ~~~~~~g~~~v~~~~~~~~---~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  302 (367)
T cd08263         226 AKAKELGATHTVNAAKEDA---VAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRL  302 (367)
T ss_pred             HHHHHhCCceEecCCcccH---HHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHH
Confidence            9999999999999877666   55566667777899999999987 788899999999999999865422 122333334


Q ss_pred             hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.++.++.++....     +   .+.++++++++.++.+++.  +++.++++++.++++.+.+++..||+|++
T Consensus       303 ~~~~~~~~~~~~~~-----~---~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         303 VRRGIKIIGSYGAR-----P---RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             hhCCeEEEecCCCC-----c---HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            46788877743211     1   3678889999999999863  67889999999999999999988999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.1e-40  Score=295.31  Aligned_cols=309  Identities=29%  Similarity=0.458  Sum_probs=262.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||||++.+++.+           ..+++.+.|. +.++||+|++.++++|++|+....|..+. ..+|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~   67 (345)
T cd08260           1 MRAAVYEEFGEP-----------LEIREVPDPE-PPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVV   67 (345)
T ss_pred             CeeEEEecCCCC-----------cEEEEccCCC-CCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEE
Confidence            999999988865           4456788899 48999999999999999999998887543 3557899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE---------------------------ecCCCcceeeEeeeCC--CeeeCCCCCCHHHHccCc
Q 019049           81 AVGPNVSNFKVGDTVCG---------------------------FAALGSFAQFIVADQS--ELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~  131 (347)
                      .+|++++++++||+|++                           +..+|+|++|+.++..  +++++|+++++++++.++
T Consensus        68 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~  147 (345)
T cd08260          68 EVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLG  147 (345)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhc
Confidence            99999999999999986                           4346999999999974  899999999999999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhH
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSV  210 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~  210 (347)
                      ..+++||+++...+++.++++|+|+| +|++|++++|+|+..|++|++++.++++.+.++++|++.+++.+. .++   .
T Consensus       148 ~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---~  223 (345)
T cd08260         148 CRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDV---A  223 (345)
T ss_pred             cchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhH---H
Confidence            99999999987788899999999999 599999999999999999999999999999999999999998876 455   4


Q ss_pred             HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC--CCcchhHhhhcceEEEEEEeccccccCchh
Q 019049          211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHV  287 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (347)
                      +.+...+.+ ++|++|||+|+ .....++++++++|+++.+|......  ...+...++.++.++.++....        
T Consensus       224 ~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  294 (345)
T cd08260         224 AAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP--------  294 (345)
T ss_pred             HHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC--------
Confidence            555566655 89999999985 56788999999999999998664322  2234444557788888765422        


Q ss_pred             HHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          288 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       288 ~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                       .+.++++++++.++.+.+.  +...+++++++++++.+.++...||+|++
T Consensus       295 -~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         295 -AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             -HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence             4678889999999998853  67899999999999999999999998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.9e-40  Score=296.35  Aligned_cols=309  Identities=28%  Similarity=0.421  Sum_probs=260.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-----------CCCCCc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-----------KPPLPF   69 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-----------~~~~p~   69 (347)
                      |||+++..++.+           ..+++.|.|+ ++++||+|++.++++|++|++.+.|.++.           ...+|.
T Consensus         1 ~~a~~~~~~~~~-----------~~~~~~~~p~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~   68 (350)
T cd08240           1 MKAAAVVEPGKP-----------LEEVEIDTPK-PPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPL   68 (350)
T ss_pred             CeeEEeccCCCC-----------ceEEecCCCC-CCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCc
Confidence            999999888765           3456889899 59999999999999999999998876532           224567


Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCC
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGC  122 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~  122 (347)
                      ++|+|++|+|+++|++++++++||+|+++.                           ..|++++|+.++.+.++++|+++
T Consensus        69 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~  148 (350)
T cd08240          69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGL  148 (350)
T ss_pred             ccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCC
Confidence            899999999999999999999999998761                           35899999999999999999999


Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++.+++.+++.+.+||+++.....+.++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.+++.
T Consensus       149 s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  227 (350)
T cd08240         149 DPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG  227 (350)
T ss_pred             CHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence            999999999999999999977777778999999975 9999999999999999 79999999999999999999888887


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  280 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (347)
                      .+..+   .+.+.+...+ ++|++||++|. .....++++|+++|+++.+|...... ..+......++.++.++.... 
T Consensus       228 ~~~~~---~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~-  301 (350)
T cd08240         228 SDPDA---AKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEA-TLPLPLLPLRALTIQGSYVGS-  301 (350)
T ss_pred             CCccH---HHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCC-cccHHHHhhcCcEEEEcccCC-
Confidence            76665   4455555555 89999999985 66788999999999999988654321 223333445778887766443 


Q ss_pred             cccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          281 KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                              .+.+..+++++.++.+++.+...|++++++++++.+.+++..||+++.
T Consensus       302 --------~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         302 --------LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             --------HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence                    367888999999999987677889999999999999999888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.2e-39  Score=290.75  Aligned_cols=322  Identities=33%  Similarity=0.488  Sum_probs=273.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.++.         ..+++.+.|.+ .++||+|++.++++|++|+....+.++....+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (323)
T cd05276           1 MKAIVIKEPGGPEV---------LELGEVPKPAP-GPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVV   70 (323)
T ss_pred             CeEEEEecCCCccc---------ceEEecCCCCC-CCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEE
Confidence            99999998887643         33346677774 899999999999999999998877665545678899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|+++.++++||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.....+.++++|+|+|++|
T Consensus        71 ~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~  150 (323)
T cd05276          71 AVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGAS  150 (323)
T ss_pred             eeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcC
Confidence            99999999999999999976799999999999999999999999999999999999999988888899999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      ++|++++++++..|++|+++++++++.+.++++|++.+++....++   ...+.+.+.+.++|++++++|+......+++
T Consensus       151 ~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~  227 (323)
T cd05276         151 GVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDF---AEEVKEATGGRGVDVILDMVGGDYLARNLRA  227 (323)
T ss_pred             hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhH---HHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence            9999999999999999999999999999998899888888766555   4555566666789999999998778889999


Q ss_pred             cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc-cccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049          241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY-KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  319 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~  319 (347)
                      ++++|+++.++..+..........++.++.++.++..... ....+....+.++++++++.++.+++...+.|+++++++
T Consensus       228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (323)
T cd05276         228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAE  307 (323)
T ss_pred             hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHH
Confidence            9999999999865432222333445578899998876654 234455556777888999999999877888999999999


Q ss_pred             HHHHHHcCCcceeEEE
Q 019049          320 AFSAIEDRKVIGKVMI  335 (347)
Q Consensus       320 a~~~~~~~~~~gk~vv  335 (347)
                      +++.+.++...||+++
T Consensus       308 a~~~~~~~~~~~kvv~  323 (323)
T cd05276         308 AHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHhCCCcceEeC
Confidence            9999998888888763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.8e-39  Score=290.60  Aligned_cols=317  Identities=24%  Similarity=0.287  Sum_probs=249.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|++++         +..++.|.|. +.++||+|++.++++|++|.....+.......+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~   70 (326)
T cd08289           1 FQALVVEKDEDDVS---------VSVKNLTLDD-LPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVV   70 (326)
T ss_pred             CeeEEEeccCCcce---------eEEEEccCCC-CCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEE
Confidence            99999999887643         5567899998 5999999999999999999876653222223458899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc--C-CCCCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA--Q-LSSGQ  151 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~--~-~~~~~  151 (347)
                      +.|  +.++++||+|++..      ..|+|++|+.++++.++++|+++++++++.+++.+.|||.++....  . ..+++
T Consensus        71 ~~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~  148 (326)
T cd08289          71 ESN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQG  148 (326)
T ss_pred             EcC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCC
Confidence            954  57799999999874      3699999999999999999999999999999999999998875433  2 34578


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|+|+|++|++|.+++|+|+.+|++|+++++++++.+.++++|++++++..+. .   .+.+... .+.++|+++||+|+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~~~~-~~~~~d~vld~~g~  223 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-Q---EESIKPL-EKQRWAGAVDPVGG  223 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-H---HHHHHhh-ccCCcCEEEECCcH
Confidence            99999999999999999999999999999999999999999999888876543 1   2333333 35679999999998


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      ..+..++++++++|+++.+|.........+...++.++.++.++.......   ....+.++.+.+.+..+.+...+.+.
T Consensus       224 ~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (326)
T cd08289         224 KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPM---ELRRRIWRRLATDLKPTQLLNEIKQE  300 (326)
T ss_pred             HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCc---hHHHHHHHHHHhhcCccccccccceE
Confidence            888899999999999999997643222223445568889988875322100   11123444444444333333456889


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      |+++++++||+.+.+++..||+|+++
T Consensus       301 ~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         301 ITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             eeHHHHHHHHHHHhcCcccceEEEeC
Confidence            99999999999999999999999863

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.1e-39  Score=294.44  Aligned_cols=308  Identities=25%  Similarity=0.312  Sum_probs=257.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCC-CCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |||+++.+++.+           . +.++|.|. | .++||+|++.++++|++|++.+.|.++. ..+|.++|+|++|+|
T Consensus         1 ~ka~~~~~~~~~-----------~-~~~~~~p~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V   66 (347)
T cd05278           1 MKALVYLGPGKI-----------G-LEEVPDPK-IQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEV   66 (347)
T ss_pred             CceEEEecCCce-----------E-EEEcCCCC-CCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEE
Confidence            899999887754           3 35788888 6 7899999999999999999999887654 456889999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEe------------------------------cCCCcceeeEeeeCC--CeeeCCCCCCHHHH
Q 019049           80 DAVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQS--ELFPVPKGCDLLAA  127 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~a  127 (347)
                      +++|++++++++||+|++.                              ..+|+|++|++++.+  +++++|++++++++
T Consensus        67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~a  146 (347)
T cd05278          67 VEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDA  146 (347)
T ss_pred             EEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHH
Confidence            9999999999999999862                              125899999999997  89999999999999


Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      +.++..+.+||+++ ...+++++++|||.|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|++.++++.+.++
T Consensus       147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  224 (347)
T cd05278         147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDI  224 (347)
T ss_pred             hhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchH
Confidence            99999999999998 6788999999999875 9999999999999997 8999988888889999999999998877665


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  285 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
                         .+.+...+++.++|++||++|. ..+..++++++++|+++.+|..............+.+++++.+.....      
T Consensus       225 ---~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  295 (347)
T cd05278         225 ---VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV------  295 (347)
T ss_pred             ---HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc------
Confidence               5556666777789999999987 677889999999999999985543321112223346777777654221      


Q ss_pred             hhHHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCc-ceeEEEE
Q 019049          286 HVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKV-IGKVMIA  336 (347)
Q Consensus       286 ~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~  336 (347)
                         .+.++++++++.++.+++.  +...|++++++++++.+..++. .+|+|++
T Consensus       296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         296 ---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             ---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence               4678889999999999863  5678999999999999988776 6788875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.4e-39  Score=288.56  Aligned_cols=313  Identities=33%  Similarity=0.405  Sum_probs=269.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..++.++.        +. +++.+.|. ++++|++|++.++++|++|++...|.++.....|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~--------~~-~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (336)
T cd08276           1 MKAWRLSGGGGLDN--------LK-LVEEPVPE-PGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVV   70 (336)
T ss_pred             CeEEEEeccCCCcc--------eE-EEeccCCC-CCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEE
Confidence            99999998765432        33 34677777 5899999999999999999999888765544578889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHH
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV  139 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~  139 (347)
                      ++|++++++++||+|++..                     .+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~  150 (336)
T cd08276          71 AVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWN  150 (336)
T ss_pred             EeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHH
Confidence            9999999999999999865                     1588999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhc
Q 019049          140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARK  218 (347)
Q Consensus       140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~  218 (347)
                      ++...+.+.+|++|+|+| +|++|++++++++..|++|++++.++++++.++++|++.+++... .++   ...+.+.++
T Consensus       151 ~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~  226 (336)
T cd08276         151 ALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDW---GEEVLKLTG  226 (336)
T ss_pred             HHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCH---HHHHHHHcC
Confidence            997788999999999996 599999999999999999999999999999999999999988766 455   555666777


Q ss_pred             CCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHH
Q 019049          219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLW  298 (347)
Q Consensus       219 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      +.++|.++|+++......++++++++|+++.+|..............+.++.++.++....         .+.+++++++
T Consensus       227 ~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l  297 (336)
T cd08276         227 GRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---------RAQFEAMNRA  297 (336)
T ss_pred             CCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---------HHHHHHHHHH
Confidence            7899999999998888899999999999999987654322334456678999999887543         4678888999


Q ss_pred             HHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          299 AAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       299 l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.++.+.+...+.+++++++++++.+.+++..+|++++
T Consensus       298 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         298 IEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             HHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            99999887777899999999999999998888999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=3.2e-39  Score=289.30  Aligned_cols=314  Identities=30%  Similarity=0.452  Sum_probs=261.7

Q ss_pred             CceEEecccCC--CCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGD--PTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~   78 (347)
                      ||||++.+++.  ++        . ..+++.+.|. +.++||+|++.++++|++|++...|.++....+|.++|+|++|+
T Consensus         2 ~~~~~~~~~~~~~~~--------~-~~~~~~~~~~-~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~   71 (329)
T cd08250           2 FRKLVVHRLSPNFRE--------A-TSIVDVPVPL-PGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGE   71 (329)
T ss_pred             ceEEEeccCCCCccc--------C-ceEEecCCCC-CCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEE
Confidence            99999999887  43        3 3345788888 58999999999999999999998887654456788999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019049           79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  158 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~  158 (347)
                      |+.+|++++++++||+|+++. .|+|++|+.++.+.++++|++  +.+++.++.++.+||+++....++.++++|+|+|+
T Consensus        72 v~~vG~~v~~~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga  148 (329)
T cd08250          72 VVAVGEGVTDFKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAA  148 (329)
T ss_pred             EEEECCCCCCCCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeC
Confidence            999999999999999999986 489999999999999999997  35677889999999999988889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHH
Q 019049          159 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  238 (347)
Q Consensus       159 ~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  238 (347)
                      +|.+|++++|+++..|++|+++++++++.+.++++|++.+++....++   .+.+.... +.++|+++|++|+.....++
T Consensus       149 ~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~~-~~~vd~v~~~~g~~~~~~~~  224 (329)
T cd08250         149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDL---GEVLKKEY-PKGVDVVYESVGGEMFDTCV  224 (329)
T ss_pred             ccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccH---HHHHHHhc-CCCCeEEEECCcHHHHHHHH
Confidence            999999999999999999999999999999999999988888766554   33333333 46899999999988888999


Q ss_pred             hccccCCEEEEEeecCCCC----------CCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeee-
Q 019049          239 KLLNWGAQILVIGFASGEI----------PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH-  307 (347)
Q Consensus       239 ~~l~~~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~-  307 (347)
                      ++++++|+++.+|......          ...+ ...+.++.++.++....+..    ...+.++++++++.++.+++. 
T Consensus       225 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~  299 (329)
T cd08250         225 DNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK----LIPQHLDRLLQLYQRGKLVCEV  299 (329)
T ss_pred             HHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH----HHHHHHHHHHHHHHCCCeeeeE
Confidence            9999999999998654320          1111 23467788888877544321    135678889999999999874 


Q ss_pred             -eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          308 -ISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       308 -~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                       +.+.++++++++|++.+.+++..||+|++
T Consensus       300 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         300 DPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             CCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence             45569999999999999998888898864

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=9.7e-40  Score=293.43  Aligned_cols=312  Identities=25%  Similarity=0.350  Sum_probs=256.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..+| +..         +..++++.|+ |+++||+|++.++++|++|+....+..  ....|.++|||++|+|+
T Consensus         1 m~a~~~~~~~-~~~---------~~~~~~~~p~-~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~   67 (339)
T cd08249           1 QKAAVLTGPG-GGL---------LVVVDVPVPK-PGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVV   67 (339)
T ss_pred             CceEEeccCC-CCc---------ccccCCCCCC-CCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEE
Confidence            9999999886 532         4457899999 599999999999999999998775543  12346789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC--------CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCC-----
Q 019049           81 AVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL-----  147 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~-----  147 (347)
                      .+|++++.+++||+|+++..        +|+|++|++++.+.++++|+++++++++.+++.+.+||+++....++     
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~  147 (339)
T cd08249          68 EVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPP  147 (339)
T ss_pred             EeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCC
Confidence            99999999999999999853        48999999999999999999999999999999999999998766655     


Q ss_pred             -----CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          148 -----SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       148 -----~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                           .++++|+|+|++|.+|++++++++.+|++|++++ ++++.+.++++|++++++..+.++   .+.+.+.++ +++
T Consensus       148 ~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~---~~~l~~~~~-~~~  222 (339)
T cd08249         148 KPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDV---VEDIRAATG-GKL  222 (339)
T ss_pred             CCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchH---HHHHHHhcC-CCe
Confidence                 7899999999999999999999999999999888 568899999999999999877666   444545544 689


Q ss_pred             cEEEeCCCc-cchHHHHhcccc--CCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc---cCchhHHHHHHHHH
Q 019049          223 DVLYDPVGG-KLTKESLKLLNW--GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI---HRPHVLEDSLRELL  296 (347)
Q Consensus       223 d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  296 (347)
                      |+++|++|+ ..+..+++++++  +|+++.++......       .+..+.++.......+..   ..+......++.+.
T Consensus       223 d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (339)
T cd08249         223 RYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP  295 (339)
T ss_pred             eEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHH
Confidence            999999998 778899999999  99999997654321       112233333333322221   33444456788899


Q ss_pred             HHHHcCceeeeeceeeC--hhhHHHHHHHHHcCC-cceeEEEEe
Q 019049          297 LWAAKGLITIHISHTYS--PSEANLAFSAIEDRK-VIGKVMIAF  337 (347)
Q Consensus       297 ~~l~~g~l~~~~~~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~  337 (347)
                      +++.++.+.+.+...++  ++++++|++.+.+++ ..+|+|+++
T Consensus       296 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         296 ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            99999999976666778  999999999999998 889999863

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.9e-39  Score=289.56  Aligned_cols=306  Identities=28%  Similarity=0.452  Sum_probs=257.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++++.            ..+++++.|.+ .++||+|+|.++++|+.|+....+.++.. .+|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~~~~-~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~   66 (337)
T cd08261           1 MKALVCEKPGR------------LEVVDIPEPVP-GAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVV   66 (337)
T ss_pred             CeEEEEeCCCc------------eEEEECCCCCC-CCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEE
Confidence            89999987753            44567899994 99999999999999999999988876543 457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEE---------------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCG---------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|++++++++||+|++                           +...|+|++|+.++++ ++++|+++++++++++ ..
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~  144 (337)
T cd08261          67 EVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EP  144 (337)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-ch
Confidence            99999999999999987                           3235899999999999 9999999999999877 67


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      ++++++++ ...++.++++|||+|+ |.+|.+++|+|+.+|++|+++++++++.++++++|+++++++...++   .+.+
T Consensus       145 ~~~a~~~~-~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~---~~~l  219 (337)
T cd08261         145 LAIGAHAV-RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDV---AARL  219 (337)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCH---HHHH
Confidence            88899887 7889999999999975 99999999999999999999999999999999999999998887665   5566


Q ss_pred             HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  292 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      .+.+.+.++|+++||.|+ ..+..++++++++|+++.++...... ..+...+..+++++.+...         ...+.+
T Consensus       220 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~  289 (337)
T cd08261         220 RELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV-TFPDPEFHKKELTILGSRN---------ATREDF  289 (337)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCC-ccCHHHHHhCCCEEEEecc---------CChhhH
Confidence            667777789999999986 56788999999999999987554221 2233344556777766421         124678


Q ss_pred             HHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcC-CcceeEEEEe
Q 019049          293 RELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDR-KVIGKVMIAF  337 (347)
Q Consensus       293 ~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~  337 (347)
                      +++++++.+|.+++  .+...+++++++++++.+.++ ...+|+|+++
T Consensus       290 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         290 PDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            88999999999987  678899999999999999988 4778999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-39  Score=291.10  Aligned_cols=305  Identities=24%  Similarity=0.355  Sum_probs=248.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.            ..+++++.|. |+++||+||+.++++|++|++.+.|..+. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~------------~~~~~~~~p~-~~~~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G~V~   66 (339)
T PRK10083          1 MKSIVIEKPNS------------LAIEERPIPQ-PAAGEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFGVID   66 (339)
T ss_pred             CeEEEEecCCe------------eEEEeccCCC-CCCCeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEEEEE
Confidence            89999988764            3346889999 59999999999999999999998886643 2468899999999999


Q ss_pred             EeCCCCCCCCCCCEEE---------------------------EecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVC---------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|++++.+++||+|+                           ++..+|+|++|+.++.+.++++|+++++++++ +..+
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~  145 (339)
T PRK10083         67 AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEP  145 (339)
T ss_pred             EECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhch
Confidence            9999999999999998                           44446899999999999999999999998876 5577


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV-CGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  211 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~-~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  211 (347)
                      +.++|++ ...+++++|++|+|+|+ |++|++++|+|+. +|++ +++++++++|.+.++++|+++++++.+..+   .+
T Consensus       146 ~~~a~~~-~~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~---~~  220 (339)
T PRK10083        146 FTIAANV-TGRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPL---GE  220 (339)
T ss_pred             HHHHHHH-HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccH---HH
Confidence            8888864 47789999999999995 9999999999997 5995 777888899999999999999998876554   22


Q ss_pred             HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      .+..  .+.++|++||++|. ..+..++++++++|+++.+|...... ......+..+++++.+....          .+
T Consensus       221 ~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~  287 (339)
T PRK10083        221 ALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPS-EIVQQGITGKELSIFSSRLN----------AN  287 (339)
T ss_pred             HHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCc-eecHHHHhhcceEEEEEecC----------hh
Confidence            2221  23356799999996 56889999999999999998764322 12233344566776665421          36


Q ss_pred             HHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcC-CcceeEEEEeC
Q 019049          291 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDR-KVIGKVMIAFD  338 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~~  338 (347)
                      .++++++++.++.+++  .+.+.|+++++++|++.+.++ ...+|+|+.+.
T Consensus       288 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        288 KFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence            7888999999999987  378899999999999999865 45689999874

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=3.3e-39  Score=292.58  Aligned_cols=310  Identities=27%  Similarity=0.431  Sum_probs=261.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.+           ..+++++.|++ +++||+|++.++++|+.|+..+.|.++  ..+|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~~-~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~   66 (363)
T cd08279           1 MRAAVLHEVGKP-----------LEIEEVELDDP-GPGEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHEGAGVVE   66 (363)
T ss_pred             CeEEEEecCCCC-----------ceEEEeeCCCC-CCCeEEEEEEEeecCcHHHHHhcCCCC--CCCCccccccceEEEE
Confidence            999999998765           44568899994 999999999999999999998888664  3467789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------------------cCCCcceeeEeeeCC
Q 019049           81 AVGPNVSNFKVGDTVCGF-----------------------------------------------AALGSFAQFIVADQS  113 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~  113 (347)
                      ++|++++++++||+|++.                                               ...|+|++|+.++++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  146 (363)
T cd08279          67 EVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEA  146 (363)
T ss_pred             EeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccc
Confidence            999999999999999983                                               135899999999999


Q ss_pred             CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHh
Q 019049          114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS  192 (347)
Q Consensus       114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~  192 (347)
                      .++++|+++++++++.+++++.+||+++...+++.++++|+|+|+ |++|.+++++|+..|++ |+++++++++.+.+++
T Consensus       147 ~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~  225 (363)
T cd08279         147 SVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARR  225 (363)
T ss_pred             cEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence            999999999999999999999999999888899999999999965 99999999999999996 9999999999999999


Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHhhhcce
Q 019049          193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVKNW  270 (347)
Q Consensus       193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~  270 (347)
                      +|++++++....++   ..++.+.+.+.++|+++|++++ .....++++++++|+++.++.... ....++...+..++.
T Consensus       226 ~g~~~vv~~~~~~~---~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  302 (363)
T cd08279         226 FGATHTVNASEDDA---VEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEK  302 (363)
T ss_pred             hCCeEEeCCCCccH---HHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCc
Confidence            99999998877666   5556666666789999999995 567889999999999999986542 222234444555677


Q ss_pred             EEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEE
Q 019049          271 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVM  334 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v  334 (347)
                      .+.++.+...      ...+.++++++++.++.+++  .+.++|++++++++++.+.+++..+.++
T Consensus       303 ~~~~~~~~~~------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         303 RLQGSLYGSA------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EEEEEEecCc------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            7777654321      12477889999999999986  3778899999999999999888775554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.1e-38  Score=284.93  Aligned_cols=319  Identities=33%  Similarity=0.479  Sum_probs=271.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++.+++.++.         ..+++.+.|.+ .+++|+|++.++++|++|+....|..+.....|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~l-~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (325)
T cd08253           1 MRAIRYHEFGAPDV---------LRLGDLPVPTP-GPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVE   70 (325)
T ss_pred             CceEEEcccCCccc---------ceeeecCCCCC-CCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEE
Confidence            89999998876542         33457888885 899999999999999999998877665444578899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      .+|+++.+|++||+|+++.     ..|++++|+.++.+.++++|+++++.+++.+++++.+||+++....++.++++++|
T Consensus        71 ~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI  150 (325)
T cd08253          71 AVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV  150 (325)
T ss_pred             eeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE
Confidence            9999999999999999875     35899999999999999999999999999999999999999988899999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049          156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  235 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  235 (347)
                      +|+++++|++++++++..|++|+++++++++.+.++++|++.+++....++   .+.+.+.+.+.++|++++|+|.....
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~  227 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDL---ADRILAATAGQGVDVIIEVLANVNLA  227 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCH---HHHHHHHcCCCceEEEEECCchHHHH
Confidence            999999999999999999999999999999999999999998888776665   55566666667899999999988788


Q ss_pred             HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChh
Q 019049          236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS  315 (347)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~  315 (347)
                      ..+++++++|+++.++... .....+...++.++.++.+....   ...+....+.++.+.+++.++.+++.....++++
T Consensus       228 ~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  303 (325)
T cd08253         228 KDLDVLAPGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLY---TATPEERAAAAEAIAAGLADGALRPVIAREYPLE  303 (325)
T ss_pred             HHHHhhCCCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehh---hcCHHHHHHHHHHHHHHHHCCCccCccccEEcHH
Confidence            8899999999999998654 22223333446677777766532   2344455677888888999999987788899999


Q ss_pred             hHHHHHHHHHcCCcceeEEEE
Q 019049          316 EANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       316 ~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +++++++.+.++...||++++
T Consensus       304 ~~~~~~~~~~~~~~~~kvv~~  324 (325)
T cd08253         304 EAAAAHEAVESGGAIGKVVLD  324 (325)
T ss_pred             HHHHHHHHHHcCCCcceEEEe
Confidence            999999999998889999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=5.4e-39  Score=288.85  Aligned_cols=306  Identities=22%  Similarity=0.336  Sum_probs=252.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++++.++           .++++|.|. ++++||+||+.++++|++|++.+.|..+.  ..|.++|||++|+|+
T Consensus         1 mka~~~~~~~~~~-----------~~~~~~~p~-~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~   66 (338)
T PRK09422          1 MKAAVVNKDHTGD-----------VVVEKTLRP-LKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVK   66 (338)
T ss_pred             CeEEEecCCCCCc-----------eEEEecCCC-CCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEE
Confidence            9999999988752           246889999 59999999999999999999988876542  236789999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-----------ec-----------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCG-----------FA-----------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|+++++|++||+|+.           ++                 .+|++++|+.++.++++++|+++++.+++.++.
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~  146 (338)
T PRK09422         67 EVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITC  146 (338)
T ss_pred             EECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhc
Confidence            99999999999999985           11                 258999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSV  210 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~  210 (347)
                      .+.|||+++ ..++++++++|||+|+ |++|++++++|+.. |++|+++++++++++.++++|++.++++.. .++   .
T Consensus       147 ~~~ta~~~~-~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~  221 (338)
T PRK09422        147 AGVTTYKAI-KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDV---A  221 (338)
T ss_pred             chhHHHHHH-HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccH---H
Confidence            999999998 7789999999999995 99999999999984 999999999999999999999999888754 333   3


Q ss_pred             HHHHHHhcCCcccE-EEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          211 KEFLKARKLKGVDV-LYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       211 ~~~~~~~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +.+.+.++  ++|. ++++.++..+..++++++++|+++.+|...... ..+...+..++.++.++....         .
T Consensus       222 ~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~  289 (338)
T PRK09422        222 KIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESM-DLSIPRLVLDGIEVVGSLVGT---------R  289 (338)
T ss_pred             HHHHHhcC--CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCc-eecHHHHhhcCcEEEEecCCC---------H
Confidence            44444443  6884 455555577889999999999999998654322 233344556777776654322         3


Q ss_pred             HHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          290 DSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       290 ~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +.++.+++++.+|.+.+.+. .+++++++++|+.+.++...||+++.+.
T Consensus       290 ~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        290 QDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            66888999999999876554 6899999999999999999999998753

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-39  Score=289.28  Aligned_cols=305  Identities=29%  Similarity=0.425  Sum_probs=256.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           ..+++.|.|+ +.++||+|++.++++|++|++...|..+. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~   67 (334)
T PRK13771          1 MKAVILPGFKQG-----------YRIEEVPDPK-PGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVE   67 (334)
T ss_pred             CeeEEEcCCCCC-----------cEEEeCCCCC-CCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEE
Confidence            999999998874           4456789999 59999999999999999999988876542 3457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|++++.+++||+|+++.                           .+|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus        68 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~  147 (334)
T PRK13771         68 EVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCV  147 (334)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccch
Confidence            9999998899999999863                           1589999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.+||+++... .+.++++|+|+|++|.+|++++|+++..|++|+++++++++.+.++++ ++++++..  ++   .+.+
T Consensus       148 ~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~---~~~v  220 (334)
T PRK13771        148 TGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KF---SEEV  220 (334)
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hH---HHHH
Confidence            99999998655 899999999999999999999999999999999999999999998888 77666554  33   3333


Q ss_pred             HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCC-CcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  292 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      .+.   .++|+++||+|+.....++++++++|+++.+|....... .......+.++.++.+....         ..+.+
T Consensus       221 ~~~---~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  288 (334)
T PRK13771        221 KKI---GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---------TKRDV  288 (334)
T ss_pred             Hhc---CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---------CHHHH
Confidence            332   269999999998878899999999999999987543221 12233345678888776321         14678


Q ss_pred             HHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       293 ~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +.+++++.++.+++.+.+.|++++++++|+.+.++...||+++.+
T Consensus       289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        289 EEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            899999999999877888999999999999999988889999864

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=8.2e-39  Score=290.37  Aligned_cols=310  Identities=24%  Similarity=0.358  Sum_probs=248.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||.++.+++++           ..++++|.|. +.++||+||+.++++|++|++.+.|.+.  ..+|.++|||++|+|+
T Consensus         8 ~~a~~~~~~~~~-----------~~l~~~p~p~-~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~   73 (373)
T cd08299           8 CKAAVLWEPKKP-----------FSIEEIEVAP-PKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVE   73 (373)
T ss_pred             eEEEEEecCCCC-----------cEEEEeecCC-CCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEE
Confidence            678888776654           3446899999 5999999999999999999999988753  3568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|+++..+++||+|+.+.                                                ..|+|++|++++.
T Consensus        74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~  153 (373)
T cd08299          74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE  153 (373)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence            9999999999999998641                                                2489999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++++.+++++.+||+++...++++++++|+|+|+ |++|++++++++..|+ +|+++++++++++.++
T Consensus       154 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~  232 (373)
T cd08299         154 IAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK  232 (373)
T ss_pred             cceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            9999999999999999999999999999878899999999999976 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCCCC--chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhc-cccCCEEEEEeecCCCCCCcchhH-hh
Q 019049          192 SLGVDHVVDLSNES--VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKL-LNWGAQILVIGFASGEIPVIPANI-AL  266 (347)
Q Consensus       192 ~~g~~~v~~~~~~~--~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~-l~~~G~~v~~g~~~~~~~~~~~~~-~~  266 (347)
                      ++|++++++..+.+  +   .+.+.+.+. +++|+++||+|. ..+..++.. ++++|+++.+|..... ...+... .+
T Consensus       233 ~lGa~~~i~~~~~~~~~---~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~-~~~~~~~~~~  307 (373)
T cd08299         233 ELGATECINPQDYKKPI---QEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS-QNLSINPMLL  307 (373)
T ss_pred             HcCCceEecccccchhH---HHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC-ceeecCHHHH
Confidence            99999998876533  3   344455555 589999999996 556665654 4679999999876432 1112111 24


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++.++.++....+..      .+.+.+.++.+.++.++  +.+.+.|+++++.+|++.+.+++.. |+++.+
T Consensus       308 ~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~-k~~~~~  373 (373)
T cd08299         308 LTGRTWKGAVFGGWKS------KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI-RTVLTF  373 (373)
T ss_pred             hcCCeEEEEEecCCcc------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcc-eEEEeC
Confidence            5677888877655421      24455666667666554  3478999999999999998877654 777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.7e-39  Score=286.49  Aligned_cols=305  Identities=31%  Similarity=0.478  Sum_probs=255.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..++.+           ..+++.|.|. +.++||+|++.++++|++|++...|.++. ...|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~   67 (332)
T cd08259           1 MKAAILHKPNKP-----------LQIEEVPDPE-PGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVE   67 (332)
T ss_pred             CeEEEEecCCCc-----------eEEEEccCCC-CCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEE
Confidence            899999874433           4456889999 48999999999999999999999886653 3457889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      ++|++++++++||+|+++.                           ..|+|++|+.++...++++|+++++++++.++++
T Consensus        68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~  147 (332)
T cd08259          68 EVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACV  147 (332)
T ss_pred             EECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccH
Confidence            9999999999999999874                           1589999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.+||+++.. +.+.++++++|+|++|++|++++++++..|++|+++++++++.+.++++|.+.+++..+  +   .+.+
T Consensus       148 ~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~  221 (332)
T cd08259         148 VGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--F---SEDV  221 (332)
T ss_pred             HHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--H---HHHH
Confidence            9999999866 88999999999999999999999999999999999999999999998899887776543  3   2333


Q ss_pred             HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  293 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .+.   .++|++++++|......++++++++|+++.++................++.++.++...         ..+.++
T Consensus       222 ~~~---~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  289 (332)
T cd08259         222 KKL---GGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA---------TKADVE  289 (332)
T ss_pred             Hhc---cCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC---------CHHHHH
Confidence            322   27999999999888888999999999999998654332222333334566666665311         146788


Q ss_pred             HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      ++++++.++.+++.+.+.|++++++++|+.+.+++..||+|++
T Consensus       290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         290 EALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            8999999999987788899999999999999999888998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.5e-38  Score=282.81  Aligned_cols=313  Identities=25%  Similarity=0.285  Sum_probs=254.4

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+++.+.|.|++         ..++++|.|. ++++||+|++.++++|++|++.+.|.++....+|.++|||++|+|+.
T Consensus         1 ~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~   70 (323)
T TIGR02823         1 KALVVEKEDGKVS---------AQVETLDLSD-LPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS   70 (323)
T ss_pred             CeEEEccCCCCcc---------eeEeecCCCC-CCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe
Confidence            6889988887753         5578899999 59999999999999999999999887644345688899999999988


Q ss_pred             eCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh--cCCCCCC-E
Q 019049           82 VGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR--AQLSSGQ-V  152 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~-~  152 (347)
                        +++.+|++||+|+++.      .+|++++|+.++.+.++++|+++++++++.++..+.+|+.++...  +++.+++ +
T Consensus        71 --~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~  148 (323)
T TIGR02823        71 --SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP  148 (323)
T ss_pred             --cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCce
Confidence              5677899999999874      358999999999999999999999999999999999999887433  3488898 9


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  232 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  232 (347)
                      |+|+|++|.+|.+++++|+.+|+++++++.++++++.++++|++.+++..+..     ..+...+. .++|.++||+|+.
T Consensus       149 vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~-~~~d~vld~~g~~  222 (323)
T TIGR02823       149 VLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLS-----PPGKPLEK-ERWAGAVDTVGGH  222 (323)
T ss_pred             EEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHH-----HHHHHhcC-CCceEEEECccHH
Confidence            99999999999999999999999999999989989999999998888754322     12223333 3599999999988


Q ss_pred             chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceee
Q 019049          233 LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY  312 (347)
Q Consensus       233 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~  312 (347)
                      .+..++++++++|+++.+|.........+...++.++.++.++.....   ......+.++.+.+++..+.+.+. ...|
T Consensus       223 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  298 (323)
T TIGR02823       223 TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYC---PMALREAAWQRLATDLKPRNLESI-TREI  298 (323)
T ss_pred             HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecccc---CchhHHHHHHHHHHHhhcCCCcCc-eeee
Confidence            888899999999999999876432222233345578888888764321   112223556777778888887654 5589


Q ss_pred             ChhhHHHHHHHHHcCCcceeEEEE
Q 019049          313 SPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       313 ~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +++++++||+.+.+++..||+|+.
T Consensus       299 ~l~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       299 TLEELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             cHHHHHHHHHHHhCCCccceEEEe
Confidence            999999999999999999999875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.3e-38  Score=289.59  Aligned_cols=306  Identities=24%  Similarity=0.285  Sum_probs=250.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++..++.            +.++++|.|.+|+++||+|++.++++|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         1 m~~~~~~~~~~------------~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e~~G~V~   66 (375)
T cd08282           1 MKAVVYGGPGN------------VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHEAMGEVE   66 (375)
T ss_pred             CceEEEecCCc------------eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccccEEEEE
Confidence            89999977663            445788989844789999999999999999999988765  3458899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-------ec------------------------------CCCcceeeEeeeCC--CeeeCCCC
Q 019049           81 AVGPNVSNFKVGDTVCG-------FA------------------------------ALGSFAQFIVADQS--ELFPVPKG  121 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~  121 (347)
                      ++|++++++++||+|+.       .+                              .+|+|++|+.++..  .++++|++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          67 EVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             EeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCC
Confidence            99999999999999976       21                              13889999999975  89999999


Q ss_pred             CCHH---HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcE
Q 019049          122 CDLL---AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDH  197 (347)
Q Consensus       122 ~~~~---~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~  197 (347)
                      ++++   +++.++.++++||+++ ..+++.+|++|+|.|+ |++|++++|+++..|+ +|+++++++++.+.++++|+. 
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-  223 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-  223 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-
Confidence            9998   5677888999999998 7889999999999776 9999999999999998 899999999999999999984 


Q ss_pred             EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccc------------hHHHHhccccCCEEEEEeecCCC-C-------
Q 019049          198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL------------TKESLKLLNWGAQILVIGFASGE-I-------  257 (347)
Q Consensus       198 v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~-~-------  257 (347)
                      .+++.+.++   .+.+.+.+. +++|+++||+|.+.            +..++++++++|+++.+|..... .       
T Consensus       224 ~v~~~~~~~---~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~  299 (375)
T cd08282         224 PIDFSDGDP---VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAA  299 (375)
T ss_pred             EeccCcccH---HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccc
Confidence            566665555   455555665 68999999999763            78889999999999988764321 1       


Q ss_pred             ----CCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcce
Q 019049          258 ----PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIG  331 (347)
Q Consensus       258 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~g  331 (347)
                          ..++...++.++..+.+....         ..+.+..+++++.++.+++  .+.+.|++++++++++.+.+++ .+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~  369 (375)
T cd08282         300 KQGELSFDFGLLWAKGLSFGTGQAP---------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET  369 (375)
T ss_pred             cCccccccHHHHHhcCcEEEEecCC---------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce
Confidence                112334455666655543211         1467788899999999986  3889999999999999999988 88


Q ss_pred             eEEEEe
Q 019049          332 KVMIAF  337 (347)
Q Consensus       332 k~vv~~  337 (347)
                      |+|+++
T Consensus       370 kvvv~~  375 (375)
T cd08282         370 KVVIKP  375 (375)
T ss_pred             EEEeCC
Confidence            999753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.4e-38  Score=281.02  Aligned_cols=320  Identities=32%  Similarity=0.433  Sum_probs=268.7

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+.+..++.+..        +. +.+.+.|. +.++||+|++.++++|+.|++...+..+.  .+|.++|||++|+|+.
T Consensus         1 ~~~~~~~~~~~~~--------~~-~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~   68 (320)
T cd05286           1 KAVRIHKTGGPEV--------LE-YEDVPVPE-PGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEA   68 (320)
T ss_pred             CeEEEecCCCccc--------eE-EeecCCCC-CCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEE
Confidence            5677776665532        22 34566666 48999999999999999999988776542  4577899999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  161 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~  161 (347)
                      +|+++.++++||+|+++...|++++|+.++.+.++++|+++++.+++.++....++|+++...+++.++++|+|+|++|+
T Consensus        69 ~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~  148 (320)
T cd05286          69 VGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG  148 (320)
T ss_pred             ECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence            99999999999999998535899999999999999999999999999999999999999988899999999999999899


Q ss_pred             HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhcc
Q 019049          162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  241 (347)
Q Consensus       162 ~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  241 (347)
                      +|.+++++++.+|++|++++.++++.+.++++|++.+++.....+   ...+...+.+.++|.+++|+++.....+++++
T Consensus       149 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l  225 (320)
T cd05286         149 VGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDF---VERVREITGGRGVDVVYDGVGKDTFEGSLDSL  225 (320)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhH---HHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence            999999999999999999999999999999999998887766555   55566667777899999999988788899999


Q ss_pred             ccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHH
Q 019049          242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF  321 (347)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~  321 (347)
                      +++|+++.+|........++...+..+++++.++....+. ..+....+.++++++++.++.+++.+.+.|+++++++++
T Consensus       226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~  304 (320)
T cd05286         226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI-ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAH  304 (320)
T ss_pred             ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhc-CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHH
Confidence            9999999998655432233333344788888876654443 455666678889999999999987777899999999999


Q ss_pred             HHHHcCCcceeEEEEe
Q 019049          322 SAIEDRKVIGKVMIAF  337 (347)
Q Consensus       322 ~~~~~~~~~gk~vv~~  337 (347)
                      +.+.++...+++++++
T Consensus       305 ~~~~~~~~~~~vv~~~  320 (320)
T cd05286         305 RDLESRKTTGKLLLIP  320 (320)
T ss_pred             HHHHcCCCCceEEEeC
Confidence            9999988889998753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-38  Score=287.78  Aligned_cols=305  Identities=19%  Similarity=0.308  Sum_probs=251.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC------C--CCCCcccC
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE------K--PPLPFVPG   72 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~------~--~~~p~~~G   72 (347)
                      |||+++.+++..            .+++.+.|+ ++++||+|++.++++|+.|+..+.|....      +  ..+|.++|
T Consensus         1 mka~~~~~~~~~------------~~~~~~~p~-~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g   67 (350)
T cd08256           1 MRAVVCHGPQDY------------RLEEVPVPR-PGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPG   67 (350)
T ss_pred             CeeEEEecCCce------------EEEECCCCC-CCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccC
Confidence            999999877653            346788899 59999999999999999999988775311      0  13577899


Q ss_pred             CceeEEEEEeCCCCC--CCCCCCEEEE---------------------------e--cCCCcceeeEeeeCC-CeeeCCC
Q 019049           73 SDYSGTVDAVGPNVS--NFKVGDTVCG---------------------------F--AALGSFAQFIVADQS-ELFPVPK  120 (347)
Q Consensus        73 ~e~~G~V~~vG~~v~--~~~~Gd~V~~---------------------------~--~~~g~~~~~~~~~~~-~~~~~p~  120 (347)
                      ||++|+|+++|+.++  +|++||+|++                           +  ...|+|++|+.++++ .++++|+
T Consensus        68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~  147 (350)
T cd08256          68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPD  147 (350)
T ss_pred             cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCC
Confidence            999999999999998  8999999986                           3  135899999999987 6789999


Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEE
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVV  199 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~  199 (347)
                      ++++++++.+ .+++++|+++ ..+++.++++|+|.|+ |++|++++++|+.+|++ ++++++++++.+.++++|++.++
T Consensus       148 ~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~  224 (350)
T cd08256         148 DIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL  224 (350)
T ss_pred             CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence            9999999988 8999999998 7889999999999554 99999999999999985 77888888999999999999998


Q ss_pred             eCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHh-hhcceEEEEEEe
Q 019049          200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIA-LVKNWTVHGLYW  277 (347)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~  277 (347)
                      +....++   ..++.+.+.+.++|+++|++|. ..+..++++++++|+++.+|...... ..+...+ ..+++++.++..
T Consensus       225 ~~~~~~~---~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~i~~~~~  300 (350)
T cd08256         225 NPPEVDV---VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPV-TVDWSIIGDRKELDVLGSHL  300 (350)
T ss_pred             cCCCcCH---HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCC-ccChhHhhcccccEEEEecc
Confidence            8876666   5566677777789999999995 56788999999999999998544222 1222222 355667776653


Q ss_pred             ccccccCchhHHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          278 GSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ..          ..++++++++.+|.+++.  +.+.|+++++++|++.+.+++..+|+|+
T Consensus       301 ~~----------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         301 GP----------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             Cc----------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            32          357788999999999863  6889999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=7.7e-39  Score=264.37  Aligned_cols=301  Identities=28%  Similarity=0.353  Sum_probs=248.5

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCC--CCcccCCceeEEEEEeC--CCCCCCCCCCEEEEec
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPP--LPFVPGSDYSGTVDAVG--PNVSNFKVGDTVCGFA   99 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~--~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~   99 (347)
                      .-+++.++|+ |+++|||+|+.|.+++|    .++|.+...++  .|+-+|-..+|.++...  |+...|++||.|.+..
T Consensus        27 F~lee~~vp~-p~~GqvLl~~~ylS~DP----ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~  101 (340)
T COG2130          27 FRLEEVDVPE-PGEGQVLLRTLYLSLDP----YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS  101 (340)
T ss_pred             ceeEeccCCC-CCcCceEEEEEEeccCH----HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc
Confidence            3345789999 69999999999999998    33444443333  47778877655443322  6688899999999975


Q ss_pred             CCCcceeeEeeeCCCeeeCCCCCCH--HHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE
Q 019049          100 ALGSFAQFIVADQSELFPVPKGCDL--LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI  177 (347)
Q Consensus       100 ~~g~~~~~~~~~~~~~~~~p~~~~~--~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V  177 (347)
                         +|++|.+++.+.+.|++++.-.  .....+.++..|||.+|.+.+.+++|++|+|.+|+|++|..+.|+|+..|++|
T Consensus       102 ---GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rV  178 (340)
T COG2130         102 ---GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRV  178 (340)
T ss_pred             ---cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeE
Confidence               8999999999999999865322  23455789999999999999999999999999999999999999999999999


Q ss_pred             EEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC
Q 019049          178 IAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       178 ~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      +.++.+++|+.++++ +|.+.++||+++++   .+.+.+. .+.++|+.||++|++.+...+..|+.++|++.||..+..
T Consensus       179 VGiaGg~eK~~~l~~~lGfD~~idyk~~d~---~~~L~~a-~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~Y  254 (340)
T COG2130         179 VGIAGGAEKCDFLTEELGFDAGIDYKAEDF---AQALKEA-CPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQY  254 (340)
T ss_pred             EEecCCHHHHHHHHHhcCCceeeecCcccH---HHHHHHH-CCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhc
Confidence            999999999999987 99999999999987   4444444 468999999999999999999999999999999976542


Q ss_pred             C----CC--cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcc
Q 019049          257 I----PV--IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI  330 (347)
Q Consensus       257 ~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~  330 (347)
                      .    +.  .....++.+.+++.|+........++   .+.++++..|+++|+|+...+.+-.||++++||..+.+++..
T Consensus       255 N~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~---~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~  331 (340)
T COG2130         255 NAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRF---PEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNF  331 (340)
T ss_pred             CCCCCCCCcchhhHHHhhhheeEEEEechhhhhhh---HHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCcc
Confidence            1    11  12234778899999998744332222   478899999999999998888788999999999999999999


Q ss_pred             eeEEEEeCC
Q 019049          331 GKVMIAFDD  339 (347)
Q Consensus       331 gk~vv~~~~  339 (347)
                      ||+|+++.+
T Consensus       332 GK~vvKv~~  340 (340)
T COG2130         332 GKLVVKVAD  340 (340)
T ss_pred             ceEEEEecC
Confidence            999999853

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.9e-38  Score=285.97  Aligned_cols=309  Identities=25%  Similarity=0.339  Sum_probs=257.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++..            .+++.+.|+++.++||+|++.++++|++|+..+.|.++. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~------------~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~   67 (345)
T cd08286           1 MKALVYHGPGKI------------SWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT-VTPGRILGHEGVGVVE   67 (345)
T ss_pred             CceEEEecCCce------------eEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC-CCCCceecccceEEEE
Confidence            999999887753            346788888337899999999999999999999887643 2447899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHHccC
Q 019049           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAAAAL  130 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l  130 (347)
                      ++|++++++++||+|+.+.                            .+|+|++|+.++.+  .++++|++++..+++.+
T Consensus        68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l  147 (345)
T cd08286          68 EVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVML  147 (345)
T ss_pred             EeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhc
Confidence            9999999999999998642                            13889999999987  89999999999999999


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049          131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  209 (347)
Q Consensus       131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (347)
                      +..+++||+++...+++.++++|+|.|+ |++|.+++|+++.+| .+|++++.++++.+.++++|++.++++...++   
T Consensus       148 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---  223 (345)
T cd08286         148 SDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDA---  223 (345)
T ss_pred             cchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccH---
Confidence            9999999998777889999999999876 999999999999999 69999988888999999999999998876665   


Q ss_pred             HHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhH
Q 019049          210 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL  288 (347)
Q Consensus       210 ~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      ...+.+.+.+.++|+++||+|. ..+..+++.++++|+++.+|..... ..++...++.+++++.+....          
T Consensus       224 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------  292 (345)
T cd08286         224 IEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP-VDLHLEKLWIKNITITTGLVD----------  292 (345)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC-CCcCHHHHhhcCcEEEeecCc----------
Confidence            5566667777789999999986 4567888999999999999865432 223444457788888774321          


Q ss_pred             HHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCC--cceeEEEEe
Q 019049          289 EDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRK--VIGKVMIAF  337 (347)
Q Consensus       289 ~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~--~~gk~vv~~  337 (347)
                      .+.++++.+++.++.+++  .+.++|++++++++++.+....  ...|+||+|
T Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            145788889999999875  3678999999999999998764  334888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2e-38  Score=285.90  Aligned_cols=306  Identities=29%  Similarity=0.389  Sum_probs=254.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..++.            ..+++++.|++++++||+|++.++++|+.|+....|.++  ..+|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~   66 (344)
T cd08284           1 MKAVVFKGPGD------------VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHEFVGEVV   66 (344)
T ss_pred             CeeEEEecCCC------------ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC--CCCCcccccceEEEEE
Confidence            89999987542            455788999943499999999999999999998887664  2447789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHH
Q 019049           81 AVGPNVSNFKVGDTVCGFA-------------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAA  127 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~a  127 (347)
                      ++|++++++++||+|+++.                               .+|+|++|+.++.+  .++++|++++++++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a  146 (344)
T cd08284          67 EVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAA  146 (344)
T ss_pred             eeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHh
Confidence            9999999999999998753                               14889999999874  99999999999999


Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      +++++.++|||+++. .+++.++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|+. .++.+..++
T Consensus       147 ~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~  223 (344)
T cd08284         147 LLLGDILPTGYFGAK-RAQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEP  223 (344)
T ss_pred             hhhcCchHHHHhhhH-hcCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCH
Confidence            999999999999985 588999999999975 9999999999999997 899998888899988999975 466665555


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  285 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
                         ...+.+.+.+.++|++|||+|+ .....++++++++|+++.+|..............+.+++++.+...        
T Consensus       224 ---~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------  292 (344)
T cd08284         224 ---VERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC--------  292 (344)
T ss_pred             ---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC--------
Confidence               5566667777889999999996 5678899999999999999866533222333455677787765421        


Q ss_pred             hhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          286 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       286 ~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                       ...+.++++++++.++.+++  .+.+.+++++++++++.+.+++. +|+|+.
T Consensus       293 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         293 -PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             -CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence             12477889999999999985  37788999999999999998877 899875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-38  Score=281.78  Aligned_cols=318  Identities=32%  Similarity=0.439  Sum_probs=268.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..++.++.         +.+++.+.|. +.+++|+|++.++++|++|+....+........|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (326)
T cd08272           1 MKALVLESFGGPEV---------FELREVPRPQ-PGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVE   70 (326)
T ss_pred             CeEEEEccCCCchh---------eEEeecCCCC-CCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEE
Confidence            99999999887743         3345677777 4899999999999999999998877654333457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      .+|+++.++++||+|+++.     ..|++++|+.++.++++++|+++++.+++.++..+.+||+++....++.++++++|
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli  150 (326)
T cd08272          71 AVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLI  150 (326)
T ss_pred             EeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence            9999999999999999885     25899999999999999999999999999999999999999888899999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049          156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  235 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  235 (347)
                      +|++|.+|++++++++..|++|++++++ ++.+.++++|++.+++.... +   ...+...+.+.++|.++||+++....
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~---~~~~~~~~~~~~~d~v~~~~~~~~~~  225 (326)
T cd08272         151 HGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-V---VEYVAEHTGGRGFDVVFDTVGGETLD  225 (326)
T ss_pred             EcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-H---HHHHHHhcCCCCCcEEEECCChHHHH
Confidence            9998999999999999999999999988 88899999999888877655 5   55566667777899999999987788


Q ss_pred             HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc--ccccCchhHHHHHHHHHHHHHcCceeeeec-eee
Q 019049          236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS--YKIHRPHVLEDSLRELLLWAAKGLITIHIS-HTY  312 (347)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~-~~~  312 (347)
                      .++++++++|+++.++... .   .+......+++++.+.....  .....+....+.+..+++++.++.+++.++ +.|
T Consensus       226 ~~~~~l~~~g~~v~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~  301 (326)
T cd08272         226 ASFEAVALYGRVVSILGGA-T---HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTF  301 (326)
T ss_pred             HHHHHhccCCEEEEEecCC-c---cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccccee
Confidence            8999999999999987653 1   12222336788888776543  333455556678899999999999987655 899


Q ss_pred             ChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          313 SPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       313 ~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++++++.+.++...+|+++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         302 PLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             cHHHHHHHHHHHHcCCcccEEEEEC
Confidence            9999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-38  Score=285.51  Aligned_cols=309  Identities=25%  Similarity=0.338  Sum_probs=250.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC----------CCCCCCcc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ----------EKPPLPFV   70 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~----------~~~~~p~~   70 (347)
                      |||+++.++  +           ..+++++.|+ ++++||+|++.++++|+.|+....|...          ....+|.+
T Consensus         1 m~a~~~~~~--~-----------~~~~~~~~p~-~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~   66 (341)
T cd08262           1 MRAAVFRDG--P-----------LVVRDVPDPE-PGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIV   66 (341)
T ss_pred             CceEEEeCC--c-----------eEEEecCCCC-CCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcc
Confidence            899999765  3           4456889999 5999999999999999999998887321          12235778


Q ss_pred             cCCceeEEEEEeCCCCCC-CCCCCEEEEec-----------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           71 PGSDYSGTVDAVGPNVSN-FKVGDTVCGFA-----------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        71 ~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      +|+|++|+|+++|+++++ +++||+|+++.                 ..|+|++|+.++.+.++++|+++++++++ ++.
T Consensus        67 ~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~  145 (341)
T cd08262          67 LGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTE  145 (341)
T ss_pred             cccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhh
Confidence            999999999999999987 99999999872                 35899999999999999999999999887 667


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  211 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  211 (347)
                      ++++||+++ ..++++++++|+|+|+ |++|.+++|+++.+|++ +++++.++++.+.++++|++++++++..+..+...
T Consensus       146 ~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~  223 (341)
T cd08262         146 PLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA  223 (341)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence            889999985 7899999999999976 99999999999999996 77777788899999999999899877654322222


Q ss_pred             HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      .+.+.+.+.++|+++|++|+ ..+..++++++++|+++.+|....... ........++.++.++...+         .+
T Consensus       224 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~  293 (341)
T cd08262         224 AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQFSLGYT---------PE  293 (341)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEEEeccc---------HH
Confidence            34455666789999999997 467888999999999999986643221 12222245666666543222         35


Q ss_pred             HHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          291 SLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      .++++++++.+|.+++.  +.+.+++++++++++.+.+++..||+|++
T Consensus       294 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         294 EFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            77889999999999853  57899999999999999999999999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=3.1e-38  Score=284.48  Aligned_cols=305  Identities=26%  Similarity=0.386  Sum_probs=254.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++++..            .+++.+.|.+ .+++|+|++.++++|+.|+..+.|.+. +...|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~~------------~~~~~~~~~l-~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~   66 (343)
T cd08235           1 MKAAVLHGPNDV------------RLEEVPVPEP-GPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIV   66 (343)
T ss_pred             CeEEEEecCCce------------EEEEccCCCC-CCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEE
Confidence            899999987743            3457888885 899999999999999999999887653 23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCC-----eeeCCCCCCHHHHc
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSE-----LFPVPKGCDLLAAA  128 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa  128 (347)
                      ++|++++++++||+|+++.                           ..|+|++|+.++.+.     ++++|+++++.+++
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa  146 (343)
T cd08235          67 EVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA  146 (343)
T ss_pred             eeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHH
Confidence            9999999999999999862                           358999999999998     99999999999998


Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      .+ .++.+||+++. ..++.+|++|+|+|+ |++|.+++|+|+..|++ |+++++++++.+.++++|.++++++++.++ 
T Consensus       147 ~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~-  222 (343)
T cd08235         147 LV-EPLACCINAQR-KAGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDL-  222 (343)
T ss_pred             hh-hHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCH-
Confidence            76 88999999985 458999999999975 99999999999999998 999999999999998999999998887776 


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEeccccccCc
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRP  285 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
                        .+.+.+.+.+.++|+++||++.. .+..++++++++|+++.++..... ...........++..+.++....      
T Consensus       223 --~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------  294 (343)
T cd08235         223 --VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS------  294 (343)
T ss_pred             --HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC------
Confidence              55666677777899999999964 778899999999999998865432 12223344556777776654322      


Q ss_pred             hhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          286 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       286 ~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                         .+.++++++++.++.+++  .+...|+++++.++++.+.+++ .||+|+
T Consensus       295 ---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi  342 (343)
T cd08235         295 ---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI  342 (343)
T ss_pred             ---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence               356788899999999873  4667899999999999999998 889986

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=4.3e-38  Score=282.82  Aligned_cols=320  Identities=27%  Similarity=0.325  Sum_probs=262.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++++++.      ...+..++++.|+ +.++||+|++.++++|++|++...+..+ ...+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~   72 (336)
T cd08252           1 MKAIGFTQPLPITD------PDSLIDIELPKPV-PGGRDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWDASGVVE   72 (336)
T ss_pred             CceEEecCCCCCCc------ccceeEccCCCCC-CCCCEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccceEEEEE
Confidence            89999999998741      0113445788888 4899999999999999999998877654 23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCC-----CCE
Q 019049           81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----GQV  152 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~~~  152 (347)
                      ++|+++.++++||+|+...   .+|+|++|+.++.++++++|+++++++++.++..+.+||+++...+.+.+     +++
T Consensus        73 ~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~  152 (336)
T cd08252          73 AVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKT  152 (336)
T ss_pred             EcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCE
Confidence            9999999999999999864   46999999999999999999999999999999999999999878888887     999


Q ss_pred             EEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      |+|+|++|++|++++|+++.+| ++|++++.++++.++++++|++++++... .+   ...+. ...+.++|+++||+|+
T Consensus       153 vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~---~~~i~-~~~~~~~d~vl~~~~~  227 (336)
T cd08252         153 LLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DL---AEQLE-ALGIEPVDYIFCLTDT  227 (336)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cH---HHHHH-hhCCCCCCEEEEccCc
Confidence            9999988999999999999999 89999999999999999999999888764 33   33333 3344689999999996


Q ss_pred             -cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccc-ccCc--hhHHHHHHHHHHHHHcCceeee
Q 019049          232 -KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK-IHRP--HVLEDSLRELLLWAAKGLITIH  307 (347)
Q Consensus       232 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~g~l~~~  307 (347)
                       ..+..++++++++|+++.+|....   ..+...+..++.++.+..+.... ...+  ....+.++++++++.+|.+++.
T Consensus       228 ~~~~~~~~~~l~~~g~~v~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (336)
T cd08252         228 DQHWDAMAELIAPQGHICLIVDPQE---PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT  304 (336)
T ss_pred             HHHHHHHHHHhcCCCEEEEecCCCC---cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence             678899999999999999985531   22223344678888876654311 1222  2445778899999999999864


Q ss_pred             ec---eeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          308 IS---HTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       308 ~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.   ..+++++++++++.+.++...||++++
T Consensus       305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         305 LTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            32   357999999999999999988998864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.2e-38  Score=281.56  Aligned_cols=309  Identities=28%  Similarity=0.404  Sum_probs=254.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++...+.++.         ..+++.+.|. ++++||+|++.++++|++|+....+..+. ...|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~   69 (320)
T cd08243           1 MKAIVIEQPGGPEV---------LKLREIPIPE-PKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVE   69 (320)
T ss_pred             CeEEEEcCCCCccc---------eEEeecCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEE
Confidence            89999988776532         2234677777 48999999999999999999988876532 3457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  154 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl  154 (347)
                      ++|+  .++++||+|+++.      .+|+|++|+.++...++++|+++++++++.++.++.+||+++....++.+|++|+
T Consensus        70 ~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  147 (320)
T cd08243          70 EAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLL  147 (320)
T ss_pred             EecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEE
Confidence            9995  5799999999875      2489999999999999999999999999999999999999998888899999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049          155 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  234 (347)
Q Consensus       155 I~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  234 (347)
                      |+|++|++|.+++|+|+..|++|++++.++++.+.++++|++++++. ..++   .+.+.+.  +.++|+++||+|+..+
T Consensus       148 V~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~---~~~i~~~--~~~~d~vl~~~~~~~~  221 (320)
T cd08243         148 IRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAI---AEQLRAA--PGGFDKVLELVGTATL  221 (320)
T ss_pred             EEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccH---HHHHHHh--CCCceEEEECCChHHH
Confidence            99999999999999999999999999999999999999999888754 3344   3444444  5689999999998888


Q ss_pred             HHHHhccccCCEEEEEeecCCCCCC--cchhHh--hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeece
Q 019049          235 KESLKLLNWGAQILVIGFASGEIPV--IPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH  310 (347)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~  310 (347)
                      ..++++++++|+++.+|........  ......  +.++.++.++......       ...++.+++++.++.+++.+.+
T Consensus       222 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  294 (320)
T cd08243         222 KDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-------QTPLQELFDFVAAGHLDIPPSK  294 (320)
T ss_pred             HHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-------HHHHHHHHHHHHCCceeccccc
Confidence            8999999999999999865332111  111111  2566676665533211       3567888999999999877788


Q ss_pred             eeChhhHHHHHHHHHcCCcceeEEE
Q 019049          311 TYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       311 ~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      .++++++++|++.+.++...||+|+
T Consensus       295 ~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         295 VFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             EEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            9999999999999999888888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=5e-38  Score=280.77  Aligned_cols=323  Identities=30%  Similarity=0.482  Sum_probs=272.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+.+..++.+..         +.+++.+.|.+ ++++++|++.++++|+.|+....+.++.+..+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~l-~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (325)
T TIGR02824         1 MKAIEITEPGGPEV---------LVLVEVPLPVP-KAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVV   70 (325)
T ss_pred             CceEEEccCCCccc---------ceEEeCCCCCC-CCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEE
Confidence            89999988776643         33345566664 899999999999999999998877665444567899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      .+|+++.++++||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++....++.++++++|+|++|
T Consensus        71 ~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~  150 (325)
T TIGR02824        71 AVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGAS  150 (325)
T ss_pred             EeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcc
Confidence            99999999999999999876699999999999999999999999999999999999999988889999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      ++|.+++++++..|++|+++++++++.+.++++|++.+++....++   ...+...+.+.++|.+++|+|+..+..++++
T Consensus       151 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  227 (325)
T TIGR02824       151 GIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDF---VEVVKAETGGKGVDVILDIVGGSYLNRNIKA  227 (325)
T ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhH---HHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence            9999999999999999999999999898888899888877665555   5556666666789999999998777889999


Q ss_pred             cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc-ccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049          241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS-YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  319 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~  319 (347)
                      ++++|+++.++.........+...++.++.++.++.... .....+....+.+.++++++.++.+++.+.+.++++++++
T Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  307 (325)
T TIGR02824       228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQ  307 (325)
T ss_pred             hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHH
Confidence            999999999986542222334444558999999988655 2334454556777889999999999877888999999999


Q ss_pred             HHHHHHcCCcceeEEEE
Q 019049          320 AFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       320 a~~~~~~~~~~gk~vv~  336 (347)
                      +++.+.++...||++++
T Consensus       308 ~~~~~~~~~~~~~~v~~  324 (325)
T TIGR02824       308 AHALMESGDHIGKIVLT  324 (325)
T ss_pred             HHHHHHhCCCcceEEEe
Confidence            99999988888899875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2.9e-38  Score=284.14  Aligned_cols=310  Identities=30%  Similarity=0.440  Sum_probs=263.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++.+++++.          ...++.+.|.+ ++++|+|++.++++|+.|+....|.++.+..+|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~   69 (338)
T cd08254           1 MKAWRFHKGSKGL----------LVLEEVPVPEP-GPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVV   69 (338)
T ss_pred             CeeEEEecCCCCc----------eEEeccCCCCC-CCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEE
Confidence            9999999998761          23457888884 899999999999999999999988776445567889999999999


Q ss_pred             EeCCCCCCCCCCCEEEE------------------ec---------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCG------------------FA---------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|++++++++||+|+.                  ++         .+|+|++|+.++.+.++++|+++++.+++.++.+
T Consensus        70 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~  149 (338)
T cd08254          70 EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDA  149 (338)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcch
Confidence            99999999999999986                  21         2489999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.+||+++.....+.++++|||.|+ |.+|++++++|+..|++|++++.++++.+.++++|++++++..+...   ...+
T Consensus       150 ~~ta~~~l~~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~---~~~~  225 (338)
T cd08254         150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSP---KDKK  225 (338)
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCH---HHHH
Confidence            9999999988888999999999865 99999999999999999999999999999999999988888766554   2333


Q ss_pred             HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  292 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                       ..+.+.++|+++||+|. ..+..++++++++|+++.++..... ..++...++.++.++.+++...         .+.+
T Consensus       226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~  294 (338)
T cd08254         226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK-LTVDLSDLIARELRIIGSFGGT---------PEDL  294 (338)
T ss_pred             -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC-CccCHHHHhhCccEEEEeccCC---------HHHH
Confidence             55667789999999985 5778899999999999999765432 2234455677888888765332         4678


Q ss_pred             HHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       293 ~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +.+++++.++.+++. .+.+++++++++++.+.+++..||+|+++
T Consensus       295 ~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         295 PEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            889999999999876 67899999999999999999999999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-38  Score=284.64  Aligned_cols=301  Identities=25%  Similarity=0.335  Sum_probs=254.2

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      |+|+.+..+.-           +..++++.|. ++++||+||+.++++|++|++.+.|... ...+|.++|||++|+|++
T Consensus         1 ~~~~~~~~~~~-----------~~~~~~~~p~-~~~~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~V~~   67 (337)
T cd05283           1 KGYAARDASGK-----------LEPFTFERRP-LGPDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVVA   67 (337)
T ss_pred             CceEEecCCCC-----------ceEEeccCCC-CCCCeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcceeeEEEE
Confidence            56777777743           5567899999 5999999999999999999999988763 235688999999999999


Q ss_pred             eCCCCCCCCCCCEEEEe-----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHH
Q 019049           82 VGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQSELFPVPKGCDLLA  126 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~  126 (347)
                      +|+++++|++||+|+..                                   ...|+|++|+.++.+.++++|+++++++
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~  147 (337)
T cd05283          68 VGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAA  147 (337)
T ss_pred             ECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHH
Confidence            99999999999999731                                   2358999999999999999999999999


Q ss_pred             HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      ++.+++.+.+||+++.. ..+.++++++|.|+ |++|++++++++..|++|+++++++++.++++++|++.+++....+.
T Consensus       148 aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  225 (337)
T cd05283         148 AAPLLCAGITVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEA  225 (337)
T ss_pred             hhhhhhHHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhh
Confidence            99999999999999854 56899999999775 99999999999999999999999999999999999998887665432


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  285 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
                         ..    . .+.++|+++||+|... ...++++++++|+++.+|...... ..+...++.++.++.++....      
T Consensus       226 ---~~----~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~------  290 (337)
T cd05283         226 ---MK----K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLIGG------  290 (337)
T ss_pred             ---hh----h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecccC------
Confidence               11    1 2467999999999864 788999999999999998765432 344455667899999877653      


Q ss_pred             hhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          286 HVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       286 ~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                         .+.++.+++++.++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus       291 ---~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         291 ---RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             ---HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence               36788899999999998654 689999999999999999999998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.2e-38  Score=286.13  Aligned_cols=307  Identities=25%  Similarity=0.420  Sum_probs=253.4

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+++.+++++           ..+++++.|. ++++||+|++.++++|++|++.+.+.+.  ..+|.++|||++|+|++
T Consensus         2 ~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~vlv~v~~~~i~~~d~~~~~g~~~--~~~~~i~g~e~~G~V~~   67 (365)
T cd05279           2 KAAVLWEKGKP-----------LSIEEIEVAP-PKAGEVRIKVVATGVCHTDLHVIDGKLP--TPLPVILGHEGAGIVES   67 (365)
T ss_pred             ceeEEecCCCC-----------cEEEEeecCC-CCCCeEEEEEEEeeecchhHHHhcCCCC--CCCCcccccceeEEEEE
Confidence            57777766654           4456889999 4999999999999999999999888654  34578999999999999


Q ss_pred             eCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeCC
Q 019049           82 VGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQS  113 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~  113 (347)
                      +|++++.+++||+|+.+.                                                ..|+|++|+.++++
T Consensus        68 vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  147 (365)
T cd05279          68 IGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEI  147 (365)
T ss_pred             eCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCC
Confidence            999999999999998752                                                13689999999999


Q ss_pred             CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHh
Q 019049          114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS  192 (347)
Q Consensus       114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~  192 (347)
                      .++++|+++++++++.+++++.+||+++...+++.+|++|||+|+ |++|++++++|+.+|++ |+++++++++.+.+++
T Consensus       148 ~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~  226 (365)
T cd05279         148 SLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ  226 (365)
T ss_pred             ceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            999999999999999999999999999888899999999999975 99999999999999995 7788889999999999


Q ss_pred             cCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccc-cCCEEEEEeecC-CCCCCcchhHhhh
Q 019049          193 LGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLN-WGAQILVIGFAS-GEIPVIPANIALV  267 (347)
Q Consensus       193 ~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~  267 (347)
                      +|++++++..+.  ++   .+.+.+.++ .++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .
T Consensus       227 ~g~~~~v~~~~~~~~~---~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~  301 (365)
T cd05279         227 LGATECINPRDQDKPI---VEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-L  301 (365)
T ss_pred             hCCCeecccccccchH---HHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-h
Confidence            999999887665  44   445556564 689999999986 67788999999 999999998653 22223444444 6


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ++.++.|++...+..      .+.+.++++++.++.+++  .+.++++++++++||+.+.+++.. |+++
T Consensus       302 ~~~~l~g~~~~~~~~------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         302 TGRTIKGTVFGGWKS------KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             cCCeEEEEeccCCch------HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            677787776544321      467888999999999985  478899999999999999877654 5554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.6e-38  Score=281.31  Aligned_cols=315  Identities=35%  Similarity=0.503  Sum_probs=265.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++...+.+..         ..+++.+.|. +.+++|+|++.++++|++|++.+.|..+....+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (342)
T cd08266           1 MKAVVIRGHGGPEV---------LEYGDLPEPE-PGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVE   70 (342)
T ss_pred             CeEEEEecCCCccc---------eeEeecCCCC-CCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEE
Confidence            89999986665432         2234667777 4899999999999999999998887654334567889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|+++.++++||+|+.+.                           ..|++++|+.++.+.++++|+++++++++.++..
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~  150 (342)
T cd08266          71 AVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLT  150 (342)
T ss_pred             EeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhH
Confidence            9999999999999998751                           2588999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.+||+++....++.++++++|+|+++++|++++++++..|++|+++++++++.+.++..+.+.+++..+.+.   ...+
T Consensus       151 ~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  227 (342)
T cd08266         151 FLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDF---VREV  227 (342)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHH---HHHH
Confidence            9999999888889999999999999889999999999999999999999999999888888887777665554   4555


Q ss_pred             HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  293 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ...+.+.++|++++++|...+..++++++++|+++.++..............+.++.++.+.....         ...+.
T Consensus       228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  298 (342)
T cd08266         228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT---------KAELD  298 (342)
T ss_pred             HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC---------HHHHH
Confidence            566666789999999998888889999999999999986654322333334567788888876543         35788


Q ss_pred             HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++.++.+++.+.+.|++++++++++.+.++...+|+++++
T Consensus       299 ~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         299 EALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            89999999999877888999999999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.6e-38  Score=283.72  Aligned_cols=309  Identities=24%  Similarity=0.400  Sum_probs=250.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (347)
                      ||++++.++++.           ..+.+.|.|. |+++||+||+.++++|++|+..+.+...  ....+|.++|||++|+
T Consensus         1 ~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~   68 (341)
T PRK05396          1 MKALVKLKAEPG-----------LWLTDVPVPE-PGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGE   68 (341)
T ss_pred             CceEEEecCCCc-----------eEEEECCCCC-CCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEE
Confidence            899999887753           4456788899 5999999999999999999998765321  1224677899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  131 (347)
                      |+++|++++++++||+|++..                           .+|+|++|+.++.+.++++|+++++++++.+ 
T Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-  147 (341)
T PRK05396         69 VVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-  147 (341)
T ss_pred             EEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-
Confidence            999999999999999998751                           3589999999999999999999999988754 


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      ..+.++++++..  ...+|++|+|.|+ |++|.+++|+|+.+|+ +|++++.++++.+.++++|+++++++++.++   .
T Consensus       148 ~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~---~  221 (341)
T PRK05396        148 DPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDL---R  221 (341)
T ss_pred             hHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccH---H
Confidence            677777766532  3468999999875 9999999999999999 6888888889999999999999998887666   5


Q ss_pred             HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +.+.+.+.+.++|++|||.|+ ..+..++++++++|+++.+|....... .+...+..++.++.++....+        .
T Consensus       222 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--------~  292 (341)
T PRK05396        222 DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMA-IDWNKVIFKGLTIKGIYGREM--------F  292 (341)
T ss_pred             HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCc-ccHHHHhhcceEEEEEEccCc--------c
Confidence            556666777889999999986 567889999999999999987653322 234566778888877642211        2


Q ss_pred             HHHHHHHHHHHcC-ceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          290 DSLRELLLWAAKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       290 ~~~~~~~~~l~~g-~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +.+..+++++.++ .+.+.+.+.+++++++++++.+.++. .||+|++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        293 ETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             chHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            4456678888888 45455778999999999999998877 799999874

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-37  Score=277.34  Aligned_cols=322  Identities=33%  Similarity=0.485  Sum_probs=272.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++...+.++.         ..+++.+.|. +++++|+|++.++++|+.|+....+.......+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (328)
T cd08268           1 MRAVRFHQFGGPEV---------LRIEELPVPA-PGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVE   70 (328)
T ss_pred             CeEEEEeccCCcce---------eEEeecCCCC-CCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEE
Confidence            89999988776532         3335677777 5899999999999999999988777654434557789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      .+|+++.++++||+|+++.     ..|++++|+.++.+.++++|+++++.+++.+++++.++|+++.....+.++++++|
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli  150 (328)
T cd08268          71 AVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI  150 (328)
T ss_pred             eeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence            9999999999999999874     24899999999999999999999999999999999999999988889999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049          156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  235 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  235 (347)
                      +|++|++|++++++++..|+++++++.+.++.+.++++|++.+++......   ...+.+.+.+.++|++++++|+....
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~  227 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDL---VAEVLRITGGKGVDVVFDPVGGPQFA  227 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccH---HHHHHHHhCCCCceEEEECCchHhHH
Confidence            999999999999999999999999999999999998899888888776555   55566666667899999999998888


Q ss_pred             HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChh
Q 019049          236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS  315 (347)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~  315 (347)
                      .++++++++|+++.+|.........+....+.++.++.+....... .++....+.++.+.+++.++.+.+.....|+++
T Consensus       228 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (328)
T cd08268         228 KLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT-LDPEARRRAIAFILDGLASGALKPVVDRVFPFD  306 (328)
T ss_pred             HHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc-CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHH
Confidence            8999999999999998665322223333357888888887765544 556666677888888888999887778889999


Q ss_pred             hHHHHHHHHHcCCcceeEEEE
Q 019049          316 EANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       316 ~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      ++.++++.+..+...+|++++
T Consensus       307 ~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         307 DIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHHHHHHcCCCCceEEEe
Confidence            999999999988888899875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.6e-37  Score=278.47  Aligned_cols=316  Identities=31%  Similarity=0.473  Sum_probs=256.3

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+++...+.++.         +.+++.+.|. |.++||+|++.++++|++|+....|..+....+|.++|||++|+|+.
T Consensus         2 ~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~   71 (331)
T cd08273           2 REVVVTRRGGPEV---------LKVVEADLPE-PAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDA   71 (331)
T ss_pred             eeEEEccCCCccc---------EEEeccCCCC-CCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEE
Confidence            7888988887743         4455778898 58999999999999999999988877644345688999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  161 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~  161 (347)
                      +|++++.+++||+|+++...|+|++|+.++.+.++++|+++++++++.+++++.+||+++...+++.++++|+|+|++|+
T Consensus        72 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  151 (331)
T cd08273          72 LGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGG  151 (331)
T ss_pred             eCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence            99999999999999998756899999999999999999999999999999999999999988789999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhcc
Q 019049          162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  241 (347)
Q Consensus       162 ~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  241 (347)
                      +|++++++++..|++|++++. +++.+.++++|+.. ++....++   ...  .. .++++|.+++|+|+.....+++++
T Consensus       152 ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~---~~~--~~-~~~~~d~vl~~~~~~~~~~~~~~l  223 (331)
T cd08273         152 VGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDW---LPA--ML-TPGGVDVVFDGVGGESYEESYAAL  223 (331)
T ss_pred             HHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcch---hhh--hc-cCCCceEEEECCchHHHHHHHHHh
Confidence            999999999999999999998 88889998999754 45544444   222  22 335899999999987788999999


Q ss_pred             ccCCEEEEEeecCCCCC-Ccch------------hHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeee
Q 019049          242 NWGAQILVIGFASGEIP-VIPA------------NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHI  308 (347)
Q Consensus       242 ~~~G~~v~~g~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~  308 (347)
                      +++|+++.+|....... ....            .........+.+.........+|....+.++.+++++.++.+++.+
T Consensus       224 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~  303 (331)
T cd08273         224 APGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKI  303 (331)
T ss_pred             cCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCc
Confidence            99999999986543211 1110            0011122233332222233345656678899999999999999778


Q ss_pred             ceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          309 SHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       309 ~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      .+.+++++++++++.+.++...||+|+
T Consensus       304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         304 AKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            889999999999999999888888885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.5e-37  Score=280.03  Aligned_cols=309  Identities=28%  Similarity=0.430  Sum_probs=255.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++++.            ..+++.+.|.+ +++||+|++.++++|+.|+..+.+.+  +...|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------l~~~~~~~~~l-~~~~v~v~v~~~~~n~~d~~~~~~~~--~~~~~~~~g~~~~G~V~   65 (343)
T cd08236           1 MKALVLTGPGD------------LRYEDIPKPEP-GPGEVLVKVKACGICGSDIPRYLGTG--AYHPPLVLGHEFSGTVE   65 (343)
T ss_pred             CeeEEEecCCc------------eeEEecCCCCC-CCCeEEEEEEEEEECccchHhhcCCC--CCCCCcccCcceEEEEE
Confidence            89999998764            33467888985 89999999999999999999887765  23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|+++++|++||+|+++.                           ..|+|++|+.++.+.++++|+++++++++++ ..
T Consensus        66 ~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~  144 (343)
T cd08236          66 EVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EP  144 (343)
T ss_pred             EECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-ch
Confidence            9999999999999999861                           3589999999999999999999999999887 67


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      +.+||+++. .+.+.++++|+|+|+ |.+|.+++|+|+.+|++ |+++++++++.+.++++|++.++++....    ..+
T Consensus       145 ~~ta~~~l~-~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~~  218 (343)
T cd08236         145 AAVALHAVR-LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED----VEK  218 (343)
T ss_pred             HHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc----HHH
Confidence            899999985 788999999999975 99999999999999997 99999999999999999998888876544    334


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC--CCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +...+.+.++|+++||.|. ..+..++++++++|+++.+|......  ...+...++.++.++.++......   + ...
T Consensus       219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~  294 (343)
T cd08236         219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA---P-FPG  294 (343)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc---c-cch
Confidence            5556666789999999986 46788999999999999998654321  222334456888899887753221   1 234


Q ss_pred             HHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHc-CCcceeEEE
Q 019049          290 DSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIED-RKVIGKVMI  335 (347)
Q Consensus       290 ~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv  335 (347)
                      +.++++++++.++.+.  +.+.+.+++++++++++.+.+ +...||+|+
T Consensus       295 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         295 DEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            6778889999999986  346788999999999999998 667788774

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=3.4e-37  Score=275.58  Aligned_cols=315  Identities=25%  Similarity=0.281  Sum_probs=254.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++..+|.++.         ...++.|.|. |+++||+|++.++++|++|+....|.+.....+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~   70 (324)
T cd08288           1 FKALVLEKDDGGTS---------AELRELDESD-LPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVV   70 (324)
T ss_pred             CeeEEEeccCCCcc---------eEEEECCCCC-CCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEE
Confidence            99999999887643         5556899999 5999999999999999999998877654334467889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHH--HhcCCC-CCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLS-SGQ  151 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~-~~~  151 (347)
                      +  ++++++++||+|+++.      ..|+|++|+.++.+.++++|+++++++++.++..+++++.++.  ...+.. +++
T Consensus        71 ~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~  148 (324)
T cd08288          71 E--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDG  148 (324)
T ss_pred             e--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCC
Confidence            8  7778899999999863      2589999999999999999999999999999999999987763  124455 578


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|+|+|++|++|.+++|+|+.+|++|++++.++++.+.++++|+++++++.+..     ..+...+ ..++|.++|++++
T Consensus       149 ~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~-~~~~~~~~d~~~~  222 (324)
T cd08288         149 PVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELS-----EPGRPLQ-KERWAGAVDTVGG  222 (324)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhh-----Hhhhhhc-cCcccEEEECCcH
Confidence            999999999999999999999999999999999999999999999998875421     2233333 3358999999998


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      ..+...+..++.+|+++.+|.........+...++.++.++.++.......   ....+.+..+.+++.++.+.+ +.+.
T Consensus       223 ~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-i~~~  298 (324)
T cd08288         223 HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI---ERRRAAWARLARDLDPALLEA-LTRE  298 (324)
T ss_pred             HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc---hhhHHHHHHHHHHHhcCCccc-ccee
Confidence            667788888999999999987532111123333447888888876433211   223467777888888998875 4789


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +++++++++++.+.+++..||+++++
T Consensus       299 ~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         299 IPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             ecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            99999999999999999999999863

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=8.5e-38  Score=282.44  Aligned_cols=319  Identities=29%  Similarity=0.385  Sum_probs=247.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCC-CCeEEEEEEEecCChhhHHHHhccCC--------------CCC
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STAVRVRVKATSLNYANYLQILGKYQ--------------EKP   65 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~eV~i~v~~~~i~~~d~~~~~g~~~--------------~~~   65 (347)
                      |||++++++|++.        +.+.+++.+.|. |. ++||+|++.++++|++|+....|...              ...
T Consensus         1 ~~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~   71 (350)
T cd08248           1 MKAWQIHSYGGID--------SLLLLENARIPV-IRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGI   71 (350)
T ss_pred             CceEEecccCCCc--------ceeeecccCCCC-CCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCC
Confidence            9999999988763        124456888898 54 99999999999999999998877421              023


Q ss_pred             CCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHH
Q 019049           66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV  142 (347)
Q Consensus        66 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~  142 (347)
                      .+|.++|||++|+|+.+|+++.++++||+|+++.   ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.
T Consensus        72 ~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~  151 (350)
T cd08248          72 EFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALV  151 (350)
T ss_pred             CCCeeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHH
Confidence            4588999999999999999999999999999875   2599999999999999999999999999999999999999987


Q ss_pred             HhcCCCC----CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSS----GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~----~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ..+.+.+    |++|+|+|++|++|++++++++.+|++|+++.++ ++.+.++++|++.+++..+..+   .+.+.   .
T Consensus       152 ~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~---~~~l~---~  224 (350)
T cd08248         152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDF---EEELT---E  224 (350)
T ss_pred             HhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhH---HHHHH---h
Confidence            7777754    9999999999999999999999999999988865 5777888999988888766544   33332   3


Q ss_pred             CCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCC-C--c---ch-hHhhhcceEEEEEEeccc-cccCchhHHH
Q 019049          219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP-V--I---PA-NIALVKNWTVHGLYWGSY-KIHRPHVLED  290 (347)
Q Consensus       219 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~--~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  290 (347)
                      ..++|+++||+|......++++++++|+++.++....... .  .   +. ..+......+........ ....+....+
T Consensus       225 ~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (350)
T cd08248         225 RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGS  304 (350)
T ss_pred             cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHH
Confidence            4679999999998888899999999999999975432110 0  0   00 000000000000000000 0000011247


Q ss_pred             HHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      .+.++++++.+|.+++.+.+.|++++++++++.+.++...+|+++
T Consensus       305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         305 ALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            788999999999998778899999999999999998888888876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.1e-36  Score=271.86  Aligned_cols=321  Identities=48%  Similarity=0.828  Sum_probs=270.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCC-CCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |+|+++..++.+..        +. +.+.+ |. +. +++++|++.++++|++|+....|.+......|.++|||++|+|
T Consensus         1 ~~~~~~~~~~~~~~--------~~-~~~~~-~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v   69 (323)
T cd08241           1 MKAVVCKELGGPED--------LV-LEEVP-PE-PGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVV   69 (323)
T ss_pred             CeEEEEecCCCcce--------eE-EecCC-CC-CCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEE
Confidence            89999987766532        23 34555 65 35 5999999999999999999887766443445778999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      +.+|+++.++++||+|+++...|++++|+.++.+.++++|++++..+++.++..+.+|++++.....+.++++|+|+|++
T Consensus        70 ~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  149 (323)
T cd08241          70 EAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAA  149 (323)
T ss_pred             EEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            99999999999999999987458999999999999999999999999998999999999998778899999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      |++|++++++++..|++|++++.++++.+.++++|++.+++....++   .+.+...+.+.++|.+++|+|......+++
T Consensus       150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~  226 (323)
T cd08241         150 GGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDL---RERVKALTGGRGVDVVYDPVGGDVFEASLR  226 (323)
T ss_pred             chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccH---HHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence            99999999999999999999999999999999999888887766555   556666777778999999999877788999


Q ss_pred             ccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049          240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  319 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~  319 (347)
                      +++++|+++.++..............+.++.++.+.....+....+....+.++++++++.++.+++.+...|+++++.+
T Consensus       227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (323)
T cd08241         227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAE  306 (323)
T ss_pred             hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHH
Confidence            99999999999865433221223345678889988877666555665566788999999999999877888999999999


Q ss_pred             HHHHHHcCCcceeEEE
Q 019049          320 AFSAIEDRKVIGKVMI  335 (347)
Q Consensus       320 a~~~~~~~~~~gk~vv  335 (347)
                      +++.+.++...+|+++
T Consensus       307 ~~~~~~~~~~~~~vvv  322 (323)
T cd08241         307 ALRALADRKATGKVVL  322 (323)
T ss_pred             HHHHHHhCCCCCcEEe
Confidence            9999998888888876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-36  Score=271.00  Aligned_cols=318  Identities=31%  Similarity=0.432  Sum_probs=261.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++..+.         ..++++|.|.+ .+++|+|++.++++|++|+....+.... ..+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~   69 (325)
T cd08271           1 MKAWVLPKPGAALQ---------LTLEEIEIPGP-GAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPHVPGVDGAGVVV   69 (325)
T ss_pred             CeeEEEccCCCcce---------eEEeccCCCCC-CCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCcccccceEEEEE
Confidence            99999999984211         44568899994 9999999999999999999988776532 2346789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049           81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      .+|+++.++++||+|+++.   ..|+|++|+.++.+.++++|+++++.+++.+++.+.++++++...+++.+|++++|+|
T Consensus        70 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g  149 (325)
T cd08271          70 AVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITG  149 (325)
T ss_pred             EeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            9999999999999999885   3589999999999999999999999999999999999999998888999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHH
Q 019049          158 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  237 (347)
Q Consensus       158 ~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  237 (347)
                      ++|++|++++++++..|++|+++. ++++.+.+.++|++.+++.....+   ...+...+.+.++|.+++|+++.....+
T Consensus       150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~  225 (325)
T cd08271         150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDV---CERIKEITGGRGVDAVLDTVGGETAAAL  225 (325)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccH---HHHHHHHcCCCCCcEEEECCCcHhHHHH
Confidence            989999999999999999999887 677888888899988888766655   4556666677789999999998777788


Q ss_pred             HhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc----hhHHHHHHHHHHHHHcCceeeeeceeeC
Q 019049          238 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP----HVLEDSLRELLLWAAKGLITIHISHTYS  313 (347)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~g~l~~~~~~~~~  313 (347)
                      +++++++|+++.++......    ....+.++..+....+.......+    ....+.+.++++++.++.+++...+.|+
T Consensus       226 ~~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (325)
T cd08271         226 APTLAFNGHLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLP  301 (325)
T ss_pred             HHhhccCCEEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEc
Confidence            99999999999986443221    112234445555444333222222    3445777889999999999877778899


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEEe
Q 019049          314 PSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       314 ~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++.++++.+.++...+|+++++
T Consensus       302 ~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         302 FEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHHHHHHcCCccceEEEEC
Confidence            999999999999988889998763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.8e-37  Score=276.39  Aligned_cols=306  Identities=25%  Similarity=0.338  Sum_probs=249.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++.+++..            .+++.|.|.+++++||+||+.++++|++|+..+.|.++.  ..|.++|||++|+|+
T Consensus         1 m~~~~~~~~~~~------------~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~   66 (345)
T cd08287           1 MRATVIHGPGDI------------RVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVE   66 (345)
T ss_pred             CceeEEecCCce------------eEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEE
Confidence            999999876643            346788888228999999999999999999988876542  357899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-ec--------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHHc---
Q 019049           81 AVGPNVSNFKVGDTVCG-FA--------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAAA---  128 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa---  128 (347)
                      ++|+++.++++||+|+. +.                          .+|++++|+.++.+  .++++|++++++.+.   
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~  146 (345)
T cd08287          67 EVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPS  146 (345)
T ss_pred             EeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhh
Confidence            99999999999999986 22                          12889999999974  999999999883221   


Q ss_pred             --cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCC
Q 019049          129 --ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNES  205 (347)
Q Consensus       129 --~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~  205 (347)
                        .+...+.+||+++ ..+++.++++|+|.| +|++|++++|+|+..|++ ++++++++++.+.++++|+++++++....
T Consensus       147 ~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~  224 (345)
T cd08287         147 LLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE  224 (345)
T ss_pred             hHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc
Confidence              2236788999988 578899999999977 499999999999999995 88888888888989999999999988766


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  284 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      +   .+.+.+.+++.++|+++||+|+ ..+..++++++++|+++.++..... ..++....+.+++++.+...       
T Consensus       225 ~---~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~-------  293 (345)
T cd08287         225 A---VARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG-VELDVRELFFRNVGLAGGPA-------  293 (345)
T ss_pred             H---HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC-CccCHHHHHhcceEEEEecC-------
Confidence            6   5667777777789999999986 5678899999999999998866532 22343355788888876322       


Q ss_pred             chhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          285 PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       285 ~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                        ...+.++++++++.++.+++  .+.+.+++++++++++.+.++... |++|+
T Consensus       294 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         294 --PVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             --CcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence              12478899999999999986  367889999999999998877655 88885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.1e-36  Score=273.34  Aligned_cols=301  Identities=26%  Similarity=0.410  Sum_probs=249.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.            ...++.+.|.+ .++||+||+.++++|+.|+....|.++.  .+|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~~~l-~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~   65 (334)
T cd08234           1 MKALVYEGPGE------------LEVEEVPVPEP-GPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVV   65 (334)
T ss_pred             CeeEEecCCCc------------eEEEeccCCCC-CCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEE
Confidence            89999988774            34568899995 9999999999999999999998887643  367889999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-------------------------e--cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCG-------------------------F--AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~-------------------------~--~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|++++++++||+|+.                         +  ...|+|++|+.++.+.++++|+++++.+++.+ ..
T Consensus        66 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~  144 (334)
T cd08234          66 AVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EP  144 (334)
T ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hH
Confidence            99999999999999986                         1  13589999999999999999999999998866 78


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      +.++++++ ..+++.++++|+|+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|++.++++...+.   ...
T Consensus       145 ~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~  219 (334)
T cd08234         145 LSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDP---EAQ  219 (334)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCH---HHH
Confidence            88999998 7889999999999976 99999999999999997 899999999999999999988888766554   222


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                        +.+.+.++|+++||+|. .....++++++++|+++.+|..... ........++.++.++.++...          .+
T Consensus       220 --~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  287 (334)
T cd08234         220 --KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----------PY  287 (334)
T ss_pred             --HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----------HH
Confidence              44566789999999985 5678899999999999999865431 1122222334467777765421          35


Q ss_pred             HHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          291 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      .++++++++.++.+++  .+..++++++++++++.+.+ ...||+|+
T Consensus       288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            6888999999999875  26788999999999999998 77888886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.3e-37  Score=273.51  Aligned_cols=297  Identities=31%  Similarity=0.461  Sum_probs=240.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||++++..++ ++.         ..+++.+.|+ ++++||+|++.++++|++|+....+. .. ..+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~-~~~---------~~~~~~~~~~-~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~   67 (325)
T cd08264           1 MKALVFEKSG-IEN---------LKVEDVKDPK-PGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVE   67 (325)
T ss_pred             CeeEEeccCC-CCc---------eEEEeccCCC-CCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEE
Confidence            8999998776 422         3335677777 59999999999999999999887642 21 2357789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      .+|++++++++||+|+.+.                           ..|+|++|+.++.+.++++|+++++++++.++.+
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~  147 (325)
T cd08264          68 EVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVA  147 (325)
T ss_pred             EECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhh
Confidence            9999999999999998651                           3589999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.+||+++.. ++++++++|+|+|++|++|++++++|+.+|++|+++++    .+.++++|++++++..+  .   .+.+
T Consensus       148 ~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~---~~~l  217 (325)
T cd08264         148 ALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--V---EEKV  217 (325)
T ss_pred             hHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--H---HHHH
Confidence            9999999854 89999999999999999999999999999999988873    36778899988887543  2   2334


Q ss_pred             HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  293 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .+.+  .++|++++++|+..+..++++++++|+++.+|.........+...+..++.++.++..+.         ++.++
T Consensus       218 ~~~~--~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  286 (325)
T cd08264         218 KEIT--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT---------RKELL  286 (325)
T ss_pred             HHHh--CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC---------HHHHH
Confidence            4444  579999999998888899999999999999986532222344455666777777765432         46777


Q ss_pred             HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeE
Q 019049          294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV  333 (347)
Q Consensus       294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~  333 (347)
                      ++++++....  ..+.+.|+++++++|++.+.++...+|+
T Consensus       287 ~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         287 ELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            8888885443  4566889999999999999988777665

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.3e-36  Score=273.55  Aligned_cols=308  Identities=26%  Similarity=0.392  Sum_probs=247.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC--CCCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~--~~~~~~p~~~G~e~~G~   78 (347)
                      |||+++..+|..           ...++.+.|. |+++|++||+.++++|+.|+..+.+..  .....+|.++|+|++|+
T Consensus         1 ~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~   68 (341)
T cd05281           1 MKAIVKTKAGPG-----------AELVEVPVPK-PGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGE   68 (341)
T ss_pred             CcceEEecCCCc-----------eEEEeCCCCC-CCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEE
Confidence            999999987753           4456788899 599999999999999999998765432  11223567899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  131 (347)
                      |+.+|++++.+++||+|+++.                           ..|+|++|++++.+.++++|++++++.+ +++
T Consensus        69 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~  147 (341)
T cd05281          69 VVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQ  147 (341)
T ss_pred             EEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhh
Confidence            999999999999999998851                           2589999999999999999999998554 567


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      .++.++++++.  ....++++|+|.|+ |++|++++|+++..|+ +|++++.+++|...++++|++++++....++   .
T Consensus       148 ~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~  221 (341)
T cd05281         148 EPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDV---V  221 (341)
T ss_pred             hHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccH---H
Confidence            88889998873  45678999999876 9999999999999999 7999988888899889999998888776665   4


Q ss_pred             HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                       .+.+.+.++++|++|||+|. .....++++++++|+++.+|.............+..++..+.++....        ..
T Consensus       222 -~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  292 (341)
T cd05281         222 -EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--------MF  292 (341)
T ss_pred             -HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCC--------cc
Confidence             56667777889999999986 466888999999999999886543221111123556777777654211        12


Q ss_pred             HHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          290 DSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       290 ~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +.++++++++.++.+++  .+...+++++++++|+.+.+++ .||+|+++
T Consensus       293 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         293 ETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             hhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            45678889999999863  4677899999999999999988 89999763

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=2e-36  Score=267.89  Aligned_cols=299  Identities=30%  Similarity=0.520  Sum_probs=252.3

Q ss_pred             CCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec--CCCcceeeE
Q 019049           31 IPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA--ALGSFAQFI  108 (347)
Q Consensus        31 ~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~~g~~~~~~  108 (347)
                      .|. +.+++|+|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|++++++++||+|+++.  .+|+|++|+
T Consensus         2 ~p~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~   80 (303)
T cd08251           2 VAP-PGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLV   80 (303)
T ss_pred             CCC-CCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEE
Confidence            466 48899999999999999999998887654445688999999999999999999999999999875  358999999


Q ss_pred             eeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 019049          109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK  188 (347)
Q Consensus       109 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~  188 (347)
                      .++.+.++++|+++++++++.++..+.+||+++ ....+.++++++|+++++++|.+++|+++.+|++|+++++++++.+
T Consensus        81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  159 (303)
T cd08251          81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE  159 (303)
T ss_pred             EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            999999999999999999999999999999998 5789999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhh
Q 019049          189 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALV  267 (347)
Q Consensus       189 ~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~  267 (347)
                      .++++|++.+++....++   ...+...+.+.++|.++|++++.....++++++++|+++.++..... ....... .+.
T Consensus       160 ~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~  235 (303)
T cd08251         160 YLKQLGVPHVINYVEEDF---EEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS-VLS  235 (303)
T ss_pred             HHHHcCCCEEEeCCCccH---HHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh-Hhh
Confidence            999999999998777666   55566677778899999999887788899999999999998765422 1112211 244


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ++..+....+.......+....+.+.++.+++.+|.+++...+.|++++++++++.+.+++..||+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         236 NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            45555555544443445555567788899999999998778889999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.8e-36  Score=272.61  Aligned_cols=319  Identities=25%  Similarity=0.360  Sum_probs=243.2

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      |++++.+++.+..         ....++|.|.+++++||+|++.++++|++|+....+........|.++|+|++|+|++
T Consensus         2 ~~~~~~~~~~~~~---------~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~   72 (352)
T cd08247           2 KALTFKNNTSPLT---------ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVK   72 (352)
T ss_pred             ceEEEecCCCcce---------eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEE
Confidence            7899998887732         3333555564349999999999999999999887543221112377899999999999


Q ss_pred             eCCCCC-CCCCCCEEEEec-----CCCcceeeEeeeCC----CeeeCCCCCCHHHHccCcchHHHHHHHHHHhc-CCCCC
Q 019049           82 VGPNVS-NFKVGDTVCGFA-----ALGSFAQFIVADQS----ELFPVPKGCDLLAAAALPVAFGTSHVALVHRA-QLSSG  150 (347)
Q Consensus        82 vG~~v~-~~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~~  150 (347)
                      +|++++ +|++||+|+++.     ..|+|++|++++..    .++++|+++++.+++.++..+.+||+++.... ++++|
T Consensus        73 vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g  152 (352)
T cd08247          73 VGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPD  152 (352)
T ss_pred             eCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCC
Confidence            999998 899999999875     25899999999987    78999999999999999999999999997777 79999


Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CC-EEEEEecChhhHHHHHhcCCcEEEeCCCCC---chhhHHHHHHHhc-CCcccE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC-GA-TIIAVARGAEKIKFLKSLGVDHVVDLSNES---VIPSVKEFLKARK-LKGVDV  224 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~-g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~~~~~~~-~~~~d~  224 (347)
                      ++|+|+|+++.+|.+++|+|+.. +. +++++.. +++.+.++++|++.+++..+.+   +   ..++.+.+. +.++|+
T Consensus       153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~d~  228 (352)
T cd08247         153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKL---LKPVLENVKGQGKFDL  228 (352)
T ss_pred             CeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccch---HHHHHHhhcCCCCceE
Confidence            99999999999999999999988 44 6777764 5556677889999998876654   4   445555554 678999


Q ss_pred             EEeCCCc-cchHHHHhccc---cCCEEEEEeecC-CCCCCcc--------h-hHhhhcceEEEEEEeccccccCchhHHH
Q 019049          225 LYDPVGG-KLTKESLKLLN---WGAQILVIGFAS-GEIPVIP--------A-NIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       225 v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~-~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      ++||+|+ .....++++++   ++|+++.++... ......+        . ...+.++.++....+.... ..+.  .+
T Consensus       229 vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~  305 (352)
T cd08247         229 ILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL-LDPN--AD  305 (352)
T ss_pred             EEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE-ecCC--HH
Confidence            9999998 56788899999   999999874221 1100000        0 0111222222221111111 1121  36


Q ss_pred             HHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      .++.+++++.++.+++.+.+.+++++++++++.+.+++..||++++
T Consensus       306 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         306 WIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             HHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            6788999999999997788999999999999999999989999985

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.9e-36  Score=271.28  Aligned_cols=300  Identities=28%  Similarity=0.398  Sum_probs=245.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.++.      ..+.+ ++.+.|. ++++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~------~~~~~-~~~~~~~-~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~   71 (329)
T cd08298           1 MKAMVLEKPGPIEE------NPLRL-TEVPVPE-PGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVE   71 (329)
T ss_pred             CeEEEEecCCCCCC------CCceE-EeccCCC-CCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEE
Confidence            89999998885421      11233 4567777 59999999999999999999999887654 3457899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      .+|+++.++++||+|+..                            ..+|+|++|+.++.+.++++|+++++.+++.+++
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~  151 (329)
T cd08298          72 AVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLC  151 (329)
T ss_pred             EECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence            999999999999999752                            1258999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.+||+++ ..++++++++|+|+|+ |++|++++++++..|++|++++.++++++.++++|++.+++....        
T Consensus       152 ~~~ta~~~~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------  221 (329)
T cd08298         152 AGIIGYRAL-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL--------  221 (329)
T ss_pred             hhHHHHHHH-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------
Confidence            999999998 8899999999999975 999999999999999999999999999999999999887765432        


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                           .+.++|+++++++. ..+..++++++++|+++.+|.........+... +.++..+.++....         .+.
T Consensus       222 -----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~---------~~~  286 (329)
T cd08298         222 -----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLT---------RQD  286 (329)
T ss_pred             -----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCC---------HHH
Confidence                 23578999998664 567889999999999998875332222222222 34455555543221         467


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ++.+++++.++.+++. .+.|+++++++|++.+.+++..||+|+
T Consensus       287 ~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         287 GEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            8889999999998874 588999999999999999999998874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.9e-36  Score=272.31  Aligned_cols=297  Identities=24%  Similarity=0.362  Sum_probs=239.2

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE----
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----   97 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----   97 (347)
                      ..+++.|.|. |+++||+|++.++++|++|+..+.+...  ...++|.++|+|++|+|+++|++++++++||+|++    
T Consensus        11 ~~l~~~~~p~-~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   89 (340)
T TIGR00692        11 AELTEVPVPE-PGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHI   89 (340)
T ss_pred             cEEEECCCCC-CCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcC
Confidence            4456789999 5999999999999999999988755421  12235778999999999999999999999999987    


Q ss_pred             -----------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049           98 -----------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  154 (347)
Q Consensus        98 -----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl  154 (347)
                                             +...|+|++|++++++.++++|++++++++ +++.++.++++++  ...+.+|++|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vl  166 (340)
T TIGR00692        90 VCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVL  166 (340)
T ss_pred             CCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEE
Confidence                                   224589999999999999999999998655 4678899999886  45678999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-c
Q 019049          155 VLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-K  232 (347)
Q Consensus       155 I~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~  232 (347)
                      |.|+ |++|.+++|+++.+|++ |++++.++++.+.++++|++.++++...++   .+.+.+.+.+.++|+++||+|. .
T Consensus       167 I~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~l~~~~~~~~~d~vld~~g~~~  242 (340)
T TIGR00692       167 VTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDV---VKEVADLTDGEGVDVFLEMSGAPK  242 (340)
T ss_pred             EECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCH---HHHHHHhcCCCCCCEEEECCCCHH
Confidence            9775 99999999999999996 889988888889899999988888877666   5556666777789999999886 5


Q ss_pred             chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeece
Q 019049          233 LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISH  310 (347)
Q Consensus       233 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~  310 (347)
                      .+..++++++++|+++.+|.............+..++.++.++...        ...+.+.++++++.++.++  +.+.+
T Consensus       243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~  314 (340)
T TIGR00692       243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--------HMFETWYTVSRLIQSGKLDLDPIITH  314 (340)
T ss_pred             HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecC--------CchhhHHHHHHHHHcCCCChHHheee
Confidence            6788999999999999998653322211122455667777664411        1135678899999999997  34788


Q ss_pred             eeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          311 TYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       311 ~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++++++.++++.+.+++. ||+|+.+
T Consensus       315 ~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       315 KFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             eeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            9999999999999988874 9999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.3e-36  Score=274.61  Aligned_cols=296  Identities=24%  Similarity=0.355  Sum_probs=240.2

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC------CCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG   97 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   97 (347)
                      +.++++|.|+ ++++||+|++.++++|++|++.+.+..      +....+|.++|||++|+|+++|+++++|++||+|+.
T Consensus        39 ~~~~~~~~p~-~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          39 LRVEDVPVPN-LKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             EEEEECCCCC-CCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            4456889999 499999999999999999999876321      112346789999999999999999999999999985


Q ss_pred             ---------------------------ecCCCcceeeEeeeCCCeeeCCCC-------CCHHHHccCcchHHHHHHHHHH
Q 019049           98 ---------------------------FAALGSFAQFIVADQSELFPVPKG-------CDLLAAAALPVAFGTSHVALVH  143 (347)
Q Consensus        98 ---------------------------~~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~l~~~~~~a~~~l~~  143 (347)
                                                 +..+|+|++|+.++++.++++|++       ++.+ +++++.++++||+++..
T Consensus       118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~  196 (384)
T cd08265         118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI  196 (384)
T ss_pred             CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence                                       434699999999999999999986       3455 55677899999999866


Q ss_pred             h-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCC---CchhhHHHHHHHhc
Q 019049          144 R-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNE---SVIPSVKEFLKARK  218 (347)
Q Consensus       144 ~-~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~~  218 (347)
                      . +++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|.+.++++|+++++++.+.   ++   ...+.+.+.
T Consensus       197 ~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~~v~~~~~  272 (384)
T cd08265         197 RGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLS---GEKVMEVTK  272 (384)
T ss_pred             hcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccH---HHHHHHhcC
Confidence            5 78999999999965 9999999999999999 79999999999999999999998887643   44   566777787


Q ss_pred             CCcccEEEeCCCcc--chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHH
Q 019049          219 LKGVDVLYDPVGGK--LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL  296 (347)
Q Consensus       219 ~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      +.++|+++|++|+.  .+..++++++++|+++.+|....... .....+..++.++.+......        ...+++++
T Consensus       273 g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~  343 (384)
T cd08265         273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVP-LHLEVLQVRRAQIVGAQGHSG--------HGIFPSVI  343 (384)
T ss_pred             CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCc-ccHHHHhhCceEEEEeeccCC--------cchHHHHH
Confidence            78899999999963  66889999999999999986543222 233445566777776643211        25678899


Q ss_pred             HHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          297 LWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       297 ~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      +++.++.+++.  +.+.|+++++++|++.+.++ ..||+|+
T Consensus       344 ~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         344 KLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            99999999863  67889999999999997665 5678875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-36  Score=270.15  Aligned_cols=288  Identities=25%  Similarity=0.324  Sum_probs=236.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.            ..+++++.|++ +++||+|++.++++|++|++...|.++    .|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~p~~-~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv   63 (319)
T cd08242           1 MKALVLDGGLD------------LRVEDLPKPEP-PPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVE   63 (319)
T ss_pred             CeeEEEeCCCc------------EEEEECCCCCC-CCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEE
Confidence            89999987653            45578999994 999999999999999999998887653    47789999999999


Q ss_pred             EeCCCCCCCCCCCEEEE---------------------------e-cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCG---------------------------F-AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++   +++||+|..                           + ..+|+|++|++++.++++++|+++++++++.+ .
T Consensus        64 ~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~  139 (319)
T cd08242          64 EGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-E  139 (319)
T ss_pred             EeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-h
Confidence            99987   679999963                           1 12589999999999999999999999988864 4


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.++|..+ ...+++++++|+|+|+ |++|.+++|+|+.+|++|++++.++++.+.++++|++.++++...        
T Consensus       140 ~~~~~~~~~-~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------  209 (319)
T cd08242         140 PLAAALEIL-EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE--------  209 (319)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc--------
Confidence            556666655 7788999999999975 999999999999999999999999999999999999888765432        


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                          +.+.++|+++||+|. ..+..++++++++|+++..+..... ...+...+..++.++.+....            .
T Consensus       210 ----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~------------~  272 (319)
T cd08242         210 ----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP-ASFDLTKAVVNEITLVGSRCG------------P  272 (319)
T ss_pred             ----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-CccCHHHheecceEEEEEecc------------c
Confidence                345689999999987 5678889999999999986654322 233444556777887776432            2


Q ss_pred             HHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          292 LRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       292 ~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++++.++.++  +.+.+.|++++++++|+.+.++. .+|+|+++
T Consensus       273 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         273 FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            67788999999994  45789999999999999998766 47998853

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=4.9e-36  Score=268.64  Aligned_cols=315  Identities=25%  Similarity=0.302  Sum_probs=251.6

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTV   79 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V   79 (347)
                      |||++...++..     +....+.+++.+.|. +.++||+|++.++++|+.|.....+....  +...+.++|+|++|+|
T Consensus         3 ~~~~~~~~~~~~-----~~~~~~~~~~~~~p~-~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   76 (329)
T cd05288           3 RQVVLAKRPEGP-----PPPDDFELVEVPLPE-LKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV   76 (329)
T ss_pred             cEEEEeccCCCC-----CCccceeEEeccCCC-CCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEE
Confidence            677776554210     112235557889999 59999999999999999887655543211  1123567899999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCcceeeEeeeC-CCeeeCCCCCC--HHHHcc-CcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ-SELFPVPKGCD--LLAAAA-LPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      +++|++  ++++||+|+++   ++|++|+.++. +.++++|++++  +.+++. +++++.+||+++...+.+.++++|+|
T Consensus        77 ~~~G~~--~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI  151 (329)
T cd05288          77 VESRSP--DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV  151 (329)
T ss_pred             EecCCC--CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence            999964  79999999986   48999999999 99999999985  555555 88999999999988788999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049          156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  234 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  234 (347)
                      +|++|++|++++|+++..|++|+++++++++.+.+++ +|++.++++.+.++   .+.+.+.+. .++|+++||+|+..+
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~v~~~~~-~~~d~vi~~~g~~~~  227 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDL---AEALKEAAP-DGIDVYFDNVGGEIL  227 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhH---HHHHHHhcc-CCceEEEEcchHHHH
Confidence            9998999999999999999999999999999999988 99999998877655   445555554 689999999999888


Q ss_pred             HHHHhccccCCEEEEEeecCCCCCC-----cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeec
Q 019049          235 KESLKLLNWGAQILVIGFASGEIPV-----IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHIS  309 (347)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~  309 (347)
                      ..++++++++|+++.+|........     .+....+.++.++.++......    ....+.+.++++++.++.+++...
T Consensus       228 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~  303 (329)
T cd05288         228 DAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA----DRFPEALAELAKWLAEGKLKYRED  303 (329)
T ss_pred             HHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH----HHHHHHHHHHHHHHHCCCcccccc
Confidence            9999999999999999865432211     2234456788888887654322    233567888999999999987666


Q ss_pred             eeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          310 HTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       310 ~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ..+++++++++++.+.+++..||+++
T Consensus       304 ~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         304 VVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccccHHHHHHHHHHHhcCCCccceeC
Confidence            77999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=5.7e-36  Score=269.58  Aligned_cols=297  Identities=25%  Similarity=0.382  Sum_probs=240.7

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhcc-CCC-CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE----
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-YQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----   97 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~----   97 (347)
                      ..+++.+.|. +.++||+|++.++++|+.|++.+.+. ... ...+|.++|+|++|+|+++|++++++++||+|++    
T Consensus        10 ~~~~~~~~~~-l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   88 (343)
T cd05285          10 LRLEERPIPE-PGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGV   88 (343)
T ss_pred             eeEEECCCCC-CCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEcccc
Confidence            4446788898 48999999999999999999876432 111 1135678999999999999999999999999986    


Q ss_pred             --------------------ec----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEE
Q 019049           98 --------------------FA----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL  153 (347)
Q Consensus        98 --------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~V  153 (347)
                                          +.    ..|+|++|++++++.++++|+++++++++.+ .++.+|++++ ..++++++++|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~v  166 (343)
T cd05285          89 PCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTV  166 (343)
T ss_pred             CCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEE
Confidence                                21    2589999999999999999999999999877 6889999987 78999999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049          154 LVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  232 (347)
Q Consensus       154 lI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  232 (347)
                      +|.|+ |++|.+++|+|+.+|++ |+++++++++.+.++++|++.+++.+..++....+.+...+.+.++|+++||.|..
T Consensus       167 lI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  245 (343)
T cd05285         167 LVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAE  245 (343)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCH
Confidence            99876 99999999999999997 99999999999999999999999877655311134455667777899999999985


Q ss_pred             -chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeec
Q 019049          233 -LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHIS  309 (347)
Q Consensus       233 -~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~  309 (347)
                       .+..++++++++|+++.+|..... ...+...+..+++.+.++...          .+.++++++++.++.++  +.+.
T Consensus       246 ~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~l~~~~~~~  314 (343)
T cd05285         246 SCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRY----------ANTYPTAIELLASGKVDVKPLIT  314 (343)
T ss_pred             HHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccC----------hHHHHHHHHHHHcCCCCchHhEE
Confidence             778899999999999999865432 223333456677777665422          15678889999999875  3467


Q ss_pred             eeeChhhHHHHHHHHHcCC-cceeEEE
Q 019049          310 HTYSPSEANLAFSAIEDRK-VIGKVMI  335 (347)
Q Consensus       310 ~~~~~~~~~~a~~~~~~~~-~~gk~vv  335 (347)
                      +.|+++++.++++.+.+++ ..+|+++
T Consensus       315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         315 HRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            7899999999999999875 4589988

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=6.4e-36  Score=268.00  Aligned_cols=301  Identities=28%  Similarity=0.411  Sum_probs=249.6

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+++.++|..           ..+++.|.|.+ .++||+|++.++++|++|++.+.+.+.. ..+|.++|||++|+|+.
T Consensus         1 ~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~   67 (330)
T cd08245           1 KAAVVHAAGGP-----------LEPEEVPVPEP-GPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVE   67 (330)
T ss_pred             CeEEEecCCCC-----------ceEEeccCCCC-CCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEE
Confidence            68888888643           44468888984 8999999999999999999999887642 34678899999999999


Q ss_pred             eCCCCCCCCCCCEEE----------------------------EecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           82 VGPNVSNFKVGDTVC----------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~----------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      +|++++++++||+|+                            ++...|+|++|+.++.+.++++|+++++.+++.++..
T Consensus        68 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~  147 (330)
T cd08245          68 VGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCA  147 (330)
T ss_pred             ECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhh
Confidence            999999999999997                            2323589999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.+||+++.. .++.++++|+|+|+ |++|.+++++|+.+|.+|+++++++++.+.++++|++.+++......   ... 
T Consensus       148 ~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-  221 (330)
T cd08245         148 GITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELD---EQA-  221 (330)
T ss_pred             HHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcch---HHh-
Confidence            9999999854 78999999999976 88999999999999999999999999999999999988887655443   221 


Q ss_pred             HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  292 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                         .. .++|++++|++. .....++++++++|+++.++.............++.++.++.++....         ...+
T Consensus       222 ---~~-~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  288 (330)
T cd08245         222 ---AA-GGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---------RADL  288 (330)
T ss_pred             ---cc-CCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---------HHHH
Confidence               22 479999999875 667889999999999999986543322222334567777887776433         3678


Q ss_pred             HHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       293 ~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      +++++++.++.+++ ..+.+++++++++|+.+.++...||+|+
T Consensus       289 ~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         289 QEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            88899999999986 4578999999999999999998888874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-35  Score=263.85  Aligned_cols=298  Identities=24%  Similarity=0.337  Sum_probs=243.4

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHH-hccCCCC-CCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCC
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQI-LGKYQEK-PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL  101 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  101 (347)
                      ..+++++.|.+ .++||+|++.++++|++|+..+ .|..... +..|.++|+|++|+|+.+|++++++++||+|+++. .
T Consensus         7 ~~~~~~~~~~l-~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~   84 (312)
T cd08269           7 FEVEEHPRPTP-GPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-G   84 (312)
T ss_pred             eEEEECCCCCC-CCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-C
Confidence            44567888995 9999999999999999999987 6654321 23477899999999999999999999999999986 4


Q ss_pred             CcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Q 019049          102 GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAV  180 (347)
Q Consensus       102 g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~  180 (347)
                      |+|++|+.++.+.++++|+++  .+++....+++++++++. .++++++++|+|+|+ |++|.+++|+|+..|++ |+++
T Consensus        85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~  160 (312)
T cd08269          85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI  160 (312)
T ss_pred             CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence            899999999999999999998  333322378889999985 888999999999975 99999999999999998 9999


Q ss_pred             ecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCC
Q 019049          181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPV  259 (347)
Q Consensus       181 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  259 (347)
                      ++++++.+.++++|++.+++.....+   .+.+.+.+.+.++|+++||.|. .....++++++++|+++.+|........
T Consensus       161 ~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~  237 (312)
T cd08269         161 DRRPARLALARELGATEVVTDDSEAI---VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRP  237 (312)
T ss_pred             CCCHHHHHHHHHhCCceEecCCCcCH---HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcc
Confidence            99999999889999988888766666   5666677777889999999986 4668899999999999999865422222


Q ss_pred             cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCc-ceeEEE
Q 019049          260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV-IGKVMI  335 (347)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv  335 (347)
                      ++...+..++..+.++...     ++....+.++++++++.++.+++  .+.+.|++++++++++.+.+++. .+|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         238 VPFQTWNWKGIDLINAVER-----DPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             cCHHHHhhcCCEEEEeccc-----CccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            3334456677777665432     22333578899999999999986  36788999999999999999864 578776

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.6e-35  Score=266.46  Aligned_cols=293  Identities=27%  Similarity=0.452  Sum_probs=235.8

Q ss_pred             eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh-ccCC-CCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEe---
Q 019049           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQ-EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF---   98 (347)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~-g~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---   98 (347)
                      ..+++.+.|.+ +++||+|++.++++|++|+.... +... ....+|.++|+|++|+|+++|+++++|++||+|+..   
T Consensus         9 ~~~~~~~~p~l-~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~   87 (339)
T cd08232           9 LRVEERPAPEP-GPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSR   87 (339)
T ss_pred             eEEEEcCCCCC-CCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCC
Confidence            44567888994 99999999999999999998764 3221 112457789999999999999999999999999862   


Q ss_pred             ----------------------c-------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCC
Q 019049           99 ----------------------A-------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS  149 (347)
Q Consensus        99 ----------------------~-------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~  149 (347)
                                            .       .+|+|++|+.++.+.++++|+++++++|+. +.+++++|+++.....+ +
T Consensus        88 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~  165 (339)
T cd08232          88 PCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-A  165 (339)
T ss_pred             cCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-C
Confidence                                  1       258999999999999999999999999876 58889999998666666 9


Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +++|||.|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|+++++++++..+    ...  .....++|+++||
T Consensus       166 ~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~--~~~~~~vd~vld~  238 (339)
T cd08232         166 GKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAY--AADKGDFDVVFEA  238 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhh--hccCCCccEEEEC
Confidence            999999875 9999999999999999 8999999988888888999999888765431    111  1123469999999


Q ss_pred             CCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee-
Q 019049          229 VGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI-  306 (347)
Q Consensus       229 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~-  306 (347)
                      .|. ..+..++++|+++|+++.++...... ..+...++.++.++.+....          .+.++++++++.++.+++ 
T Consensus       239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~  307 (339)
T cd08232         239 SGAPAALASALRVVRPGGTVVQVGMLGGPV-PLPLNALVAKELDLRGSFRF----------DDEFAEAVRLLAAGRIDVR  307 (339)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEecCCCCc-cCcHHHHhhcceEEEEEecC----------HHHHHHHHHHHHcCCCCch
Confidence            986 56788999999999999998544221 22233345677777765421          356788899999999874 


Q ss_pred             -eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          307 -HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       307 -~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                       .+.++|++++++++++.+.++...||+|+++
T Consensus       308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence             3778999999999999999888899999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.7e-35  Score=267.20  Aligned_cols=293  Identities=26%  Similarity=0.343  Sum_probs=233.7

Q ss_pred             eccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEe-----
Q 019049           26 SKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF-----   98 (347)
Q Consensus        26 ~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----   98 (347)
                      +++.+.|. |+++||+||+.++++|++|++.+.+....  ...+|.++|||++|+|+++|+++++|++||+|+..     
T Consensus        31 ~~~~~~p~-~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~  109 (364)
T PLN02702         31 IQPFKLPP-LGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISC  109 (364)
T ss_pred             EEeccCCC-CCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCC
Confidence            35677787 58999999999999999999988763211  12357789999999999999999999999999861     


Q ss_pred             --------------------c---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           99 --------------------A---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        99 --------------------~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                                          .   ..|+|++|+.++.+.++++|++++++++++. .++.++|+++ ...++.++++|+|
T Consensus       110 ~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI  187 (364)
T PLN02702        110 WRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLV  187 (364)
T ss_pred             CCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEE
Confidence                                1   1489999999999999999999999998753 4566688887 7788999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCC--CCchhhHHHHHHH--hcCCcccEEEeCCC
Q 019049          156 LGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN--ESVIPSVKEFLKA--RKLKGVDVLYDPVG  230 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~--~~~~~~d~v~d~~g  230 (347)
                      +|+ |++|++++|+++..|++ |++++.++++.+.++++|++.++++..  .++   .+.+...  +.+.++|++|||+|
T Consensus       188 ~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g  263 (364)
T PLN02702        188 MGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV---ESEVEEIQKAMGGGIDVSFDCVG  263 (364)
T ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccH---HHHHHHHhhhcCCCCCEEEECCC
Confidence            975 99999999999999995 778888888899999999998877542  344   2333222  23457999999999


Q ss_pred             c-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--ee
Q 019049          231 G-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IH  307 (347)
Q Consensus       231 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~  307 (347)
                      + ..+..++++++++|+++.+|..... ...+...+..+++++.+++..          ...++.+++++.++.+.  +.
T Consensus       264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~~~l~~~~~  332 (364)
T PLN02702        264 FNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFRY----------RNTWPLCLEFLRSGKIDVKPL  332 (364)
T ss_pred             CHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEeccC----------hHHHHHHHHHHHcCCCCchHh
Confidence            5 6778999999999999999865432 223444567788888876532          14567889999999886  34


Q ss_pred             eceeeCh--hhHHHHHHHHHcCCcceeEEEE
Q 019049          308 ISHTYSP--SEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       308 ~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      +.+.|++  +++++|++.+.+++..+|+|+.
T Consensus       333 ~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        333 ITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             eEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            6677555  8999999999988888899985

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=3e-35  Score=260.97  Aligned_cols=304  Identities=33%  Similarity=0.472  Sum_probs=253.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (347)
                      |||++++.++..+.         ..+++.+.|.+ +++||+|++.++++|+.|+..+.|...  ....+|..+|||++|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~   70 (309)
T cd05289           1 MKAVRIHEYGGPEV---------LELADVPTPEP-GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGV   70 (309)
T ss_pred             CceEEEcccCCccc---------eeecccCCCCC-CCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEE
Confidence            89999998886532         22356677774 899999999999999999998877542  1234578899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      |+.+|++++++++||+|+++.   ..|+|++|+.++...++++|+++++.+++.++..+.++++++.....+.++++|+|
T Consensus        71 v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv  150 (309)
T cd05289          71 VVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLI  150 (309)
T ss_pred             EEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEE
Confidence            999999999999999999986   24899999999999999999999999999999999999999977777999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049          156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  235 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  235 (347)
                      +|++|.+|++++++++..|++|++++.++ +.+.++++|.+.+++....++   ..    .+.+.++|.+++|+|+....
T Consensus       151 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~---~~----~~~~~~~d~v~~~~~~~~~~  222 (309)
T cd05289         151 HGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDF---ER----AAAPGGVDAVLDTVGGETLA  222 (309)
T ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCch---hh----ccCCCCceEEEECCchHHHH
Confidence            99999999999999999999999998877 888888899888887766554   21    34556799999999998888


Q ss_pred             HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChh
Q 019049          236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS  315 (347)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~  315 (347)
                      .++++++++|+++.+|.......     ....++.++......      +.  .+.++++++++.++.+++.+++.|+++
T Consensus       223 ~~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (309)
T cd05289         223 RSLALVKPGGRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE------PD--GEQLAELAELVEAGKLRPVVDRVFPLE  289 (309)
T ss_pred             HHHHHHhcCcEEEEEcCCCcchh-----hhhhccceEEEEEec------cc--HHHHHHHHHHHHCCCEEEeeccEEcHH
Confidence            89999999999999986543211     334556666655432      11  467888999999999987788999999


Q ss_pred             hHHHHHHHHHcCCcceeEEE
Q 019049          316 EANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       316 ~~~~a~~~~~~~~~~gk~vv  335 (347)
                      +++++++.+..+...+|+++
T Consensus       290 ~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         290 DAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHHHHHHHHHhCCCCCcEeC
Confidence            99999999998887778763

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-34  Score=260.82  Aligned_cols=320  Identities=35%  Similarity=0.534  Sum_probs=257.4

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      ||+++...+.+.        .+.+ ++.+.|. |.++||+|++.++++|+.|+....|..+..+..|.++|||++|+|+.
T Consensus         1 ~~~~~~~~~~~~--------~~~~-~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~   70 (337)
T cd08275           1 RAVVLTGFGGLD--------KLKV-EKEALPE-PSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEA   70 (337)
T ss_pred             CeEEEcCCCCcc--------ceEE-EecCCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEE
Confidence            567776666542        2333 4566677 58999999999999999999988776544345577899999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  161 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~  161 (347)
                      +|+++.++++||+|+++...|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++....++.++++|+|+|++|+
T Consensus        71 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~  150 (337)
T cd08275          71 VGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG  150 (337)
T ss_pred             ECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence            99999999999999999766999999999999999999999999999999999999999888889999999999999999


Q ss_pred             HHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          162 VGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       162 ~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      +|++++++++.. +..++... .+++.+.++++|++.+++....++   ...+...+ +.++|+++||+|+.....++++
T Consensus       151 ~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~d~v~~~~g~~~~~~~~~~  225 (337)
T cd08275         151 VGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDY---VEEVKKIS-PEGVDIVLDALGGEDTRKSYDL  225 (337)
T ss_pred             HHHHHHHHHHHccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcH---HHHHHHHh-CCCceEEEECCcHHHHHHHHHh
Confidence            999999999998 43333332 355778888899988888776665   44455555 4689999999998878889999


Q ss_pred             cccCCEEEEEeecCCCC-CC---------------cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCce
Q 019049          241 LNWGAQILVIGFASGEI-PV---------------IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI  304 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l  304 (347)
                      ++++|+++.+|...... ..               .....++.++.++.++.........+ .....+.++++++.++.+
T Consensus       226 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  304 (337)
T cd08275         226 LKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERE-LLTEVMDKLLKLYEEGKI  304 (337)
T ss_pred             hccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChH-HHHHHHHHHHHHHHCCCC
Confidence            99999999998654211 00               11134567888888887653333333 334567889999999999


Q ss_pred             eeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          305 TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       305 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++.....|++++++++++.+.++...||+++++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         305 KPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             CCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            877788999999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.7e-35  Score=260.67  Aligned_cols=275  Identities=28%  Similarity=0.424  Sum_probs=229.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||+++..+.+. ..         ..+++++.|.+ .++||+|++.++++|++|+....+.+. ....|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~-~~---------~~~~~~~~p~~-~~~~v~V~v~~~~l~~~d~~~~~g~~~-~~~~p~~~G~e~~G~V~   68 (306)
T cd08258           1 MKALVKTGPGP-GN---------VELREVPEPEP-GPGEVLIKVAAAGICGSDLHIYKGDYD-PVETPVVLGHEFSGTIV   68 (306)
T ss_pred             CeeEEEecCCC-Cc---------eEEeecCCCCC-CCCeEEEEEEEEEechhhHHHHcCCCC-cCCCCeeeccceEEEEE
Confidence            89999887542 21         44578999994 999999999999999999998887652 23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      .+|++++.+++||+|+++.                            ..|+|++|++++...++++|+++++++++ ++.
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~  147 (306)
T cd08258          69 EVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTE  147 (306)
T ss_pred             EECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhc
Confidence            9999999999999998864                            14899999999999999999999999887 778


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe--cChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      .+.++|+++...++++++++|+|.| +|++|.+++|+|+..|++|+++.  .+.++.+.++++|++++ ++...++   .
T Consensus       148 ~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~---~  222 (306)
T cd08258         148 PLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDL---A  222 (306)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCH---H
Confidence            8899999998889999999999976 59999999999999999988763  34557788889999888 7776666   5


Q ss_pred             HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +.+...+.+.++|+++||.|. ..+...+++++++|+++.+|........++...++.+++++.|++.++         .
T Consensus       223 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~  293 (306)
T cd08258         223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST---------P  293 (306)
T ss_pred             HHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc---------h
Confidence            556666667789999999975 567889999999999999988653333445566778999999998765         4


Q ss_pred             HHHHHHHHHHHcC
Q 019049          290 DSLRELLLWAAKG  302 (347)
Q Consensus       290 ~~~~~~~~~l~~g  302 (347)
                      ++++++++++++|
T Consensus       294 ~~~~~~~~~~~~~  306 (306)
T cd08258         294 ASWETALRLLASG  306 (306)
T ss_pred             HhHHHHHHHHhcC
Confidence            6788888888765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=6e-35  Score=256.68  Aligned_cols=290  Identities=32%  Similarity=0.456  Sum_probs=246.5

Q ss_pred             CeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeee
Q 019049           38 TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFP  117 (347)
Q Consensus        38 ~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~  117 (347)
                      +||+|++.++++|++|++...|..   ..+|.++|||++|+|+++|+++.++++||+|+++. .|+|++|+.++.+.+++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~   76 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK   76 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC---CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence            589999999999999999987764   24577899999999999999999999999999986 48999999999999999


Q ss_pred             CCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcC--C
Q 019049          118 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG--V  195 (347)
Q Consensus       118 ~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g--~  195 (347)
                      +|+++++.+++.+++++.++|+++....++++|++|+|+|++|++|++++|+++..|++|++++.++++.+.+++.|  +
T Consensus        77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~  156 (293)
T cd05195          77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV  156 (293)
T ss_pred             CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence            99999999999999999999999888889999999999998899999999999999999999999999999998888  7


Q ss_pred             cEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCC-CCcchhHhhhcceEEEE
Q 019049          196 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVKNWTVHG  274 (347)
Q Consensus       196 ~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~  274 (347)
                      +.+++....++   .+.+.+.+.+.++|.+++|+|+..+..++++++++|+++.++...... .... ...+.++.++..
T Consensus       157 ~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~  232 (293)
T cd05195         157 DHIFSSRDLSF---ADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLG-MRPFLRNVSFSS  232 (293)
T ss_pred             ceEeecCchhH---HHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccc-hhhhccCCeEEE
Confidence            77887665555   556666777778999999999988889999999999999998654321 1111 122455677777


Q ss_pred             EEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          275 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ..+..+....+....+.+.++.+++.++.+++.....+.+++++++++.+..+...||+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         233 VDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             EeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            6655554445555567888999999999998878888999999999999998888888763

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.6e-34  Score=254.66  Aligned_cols=295  Identities=31%  Similarity=0.441  Sum_probs=235.2

Q ss_pred             eeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecC--
Q 019049           25 LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAA--  100 (347)
Q Consensus        25 ~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--  100 (347)
                      .+++.+.|. |+++||+|++.++++|++|++...|..+.  ....|..+|||++|+|+++|+++.++++||+|+++..  
T Consensus        15 ~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~   93 (319)
T cd08267          15 LEVEVPIPT-PKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK   93 (319)
T ss_pred             ccccCCCCC-CCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC
Confidence            456788888 59999999999999999999998776522  1234668999999999999999999999999999863  


Q ss_pred             -CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE
Q 019049          101 -LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA  179 (347)
Q Consensus       101 -~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~  179 (347)
                       .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....++++++|+|+|++|++|++++++++..|++|++
T Consensus        94 ~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~  173 (319)
T cd08267          94 GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTG  173 (319)
T ss_pred             CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEE
Confidence             5899999999999999999999999999999999999999987788999999999999999999999999999999999


Q ss_pred             EecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc--chHHHHhccccCCEEEEEeecCCCC
Q 019049          180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK--LTKESLKLLNWGAQILVIGFASGEI  257 (347)
Q Consensus       180 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~  257 (347)
                      ++.+ ++.+.++++|++.+++....++   .   ...+.+.++|++++|+|+.  ........++++|+++.+|......
T Consensus       174 ~~~~-~~~~~~~~~g~~~~~~~~~~~~---~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~  246 (319)
T cd08267         174 VCST-RNAELVRSLGADEVIDYTTEDF---V---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL  246 (319)
T ss_pred             EeCH-HHHHHHHHcCCCEeecCCCCCc---c---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc
Confidence            9875 7888889999988887766554   2   3345567899999999853  2233444599999999998654321


Q ss_pred             CCcc---hhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEE
Q 019049          258 PVIP---ANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVM  334 (347)
Q Consensus       258 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v  334 (347)
                      ....   ..........+.....      .+.  .+.++++++++.++.+++.+.+.|++++++++++.+.++...+|++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vv  318 (319)
T cd08267         247 LLVLLLLPLTLGGGGRRLKFFLA------KPN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVV  318 (319)
T ss_pred             cccccccchhhccccceEEEEEe------cCC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence            1110   0000111112222111      111  5788899999999999987889999999999999999888778876


Q ss_pred             E
Q 019049          335 I  335 (347)
Q Consensus       335 v  335 (347)
                      +
T Consensus       319 v  319 (319)
T cd08267         319 I  319 (319)
T ss_pred             C
Confidence            4

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=1.4e-33  Score=247.65  Aligned_cols=284  Identities=33%  Similarity=0.514  Sum_probs=238.2

Q ss_pred             EEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCC
Q 019049           42 VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKG  121 (347)
Q Consensus        42 i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~  121 (347)
                      |++.++++|++|++...|.++    .|.++|||++|+|+++|++++++++||+|+++. .|+|++|+.++.+.++++|++
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~   76 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-PGSFATYVRTDARLVVPIPDG   76 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-CCceeeEEEccHHHeEECCCC
Confidence            789999999999999877643    356899999999999999999999999999986 389999999999999999999


Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC--cEEE
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVV  199 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~--~~v~  199 (347)
                      +++.+++.+++.+.++|+++.....+.+|++|+|+|++|.+|++++++++..|++|+++++++++.+.++++|+  +.++
T Consensus        77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  156 (288)
T smart00829       77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF  156 (288)
T ss_pred             CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence            99999999999999999998788899999999999998999999999999999999999999999999999998  7788


Q ss_pred             eCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEec
Q 019049          200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      ++...++   .+.+.+.+.+.++|.++|++++.....++++++++|+++.+|..... ....+... +.++.++.+..+.
T Consensus       157 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~  232 (288)
T smart00829      157 SSRDLSF---ADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLD  232 (288)
T ss_pred             eCCCccH---HHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHH
Confidence            8776665   55566666677899999999987778899999999999999865321 11122222 4667777776654


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      .+. ..+....+.+..+++++.++.+++...+.|++++++++++.+..+...+|+++
T Consensus       233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      233 ALE-EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             Hhh-cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            433 33433456778889999999988766788999999999999998877778763

Enoylreductase in Polyketide synthases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.7e-33  Score=244.65  Aligned_cols=232  Identities=19%  Similarity=0.251  Sum_probs=192.0

Q ss_pred             ccCCceeEEEEEeCCCCC------CCCCCCEEEEe----------------------------------cCCCcceeeEe
Q 019049           70 VPGSDYSGTVDAVGPNVS------NFKVGDTVCGF----------------------------------AALGSFAQFIV  109 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~----------------------------------~~~g~~~~~~~  109 (347)
                      ++|||++|+|+++|++|+      ++++||||+..                                  ..+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999998      89999999531                                  02489999999


Q ss_pred             eeCC-CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhH
Q 019049          110 ADQS-ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKI  187 (347)
Q Consensus       110 ~~~~-~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~  187 (347)
                      ++++ .++++|+++++++++.+++.+.|+|+++. .....++++|+|+|+ |++|++++|+|+.+|++ |++++.+++|+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            9997 79999999999999999999999999984 455669999999998 99999999999999996 99999899999


Q ss_pred             HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHh
Q 019049          188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIA  265 (347)
Q Consensus       188 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~  265 (347)
                      +.++++|++.+++..+  .   .+.+.+.+.+.++|++|||+|. ..+..++++++++|+++.+|.... ....++...+
T Consensus       159 ~~a~~~Ga~~~i~~~~--~---~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~  233 (280)
T TIGR03366       159 ELALSFGATALAEPEV--L---AERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV  233 (280)
T ss_pred             HHHHHcCCcEecCchh--h---HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence            9999999999887543  2   3445566677789999999987 457899999999999999996542 2224556678


Q ss_pred             hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcC--cee--eeeceeeChhhH
Q 019049          266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG--LIT--IHISHTYSPSEA  317 (347)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~l~--~~~~~~~~~~~~  317 (347)
                      +.+++++.++..+.         .+.++++++++.++  +++  ..++++|+++++
T Consensus       234 ~~~~~~i~g~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       234 VRRWLTIRGVHNYE---------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HhCCcEEEecCCCC---------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            88999999976433         36788899999874  444  348888998863

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=9.7e-32  Score=221.58  Aligned_cols=299  Identities=22%  Similarity=0.260  Sum_probs=243.5

Q ss_pred             ccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCC----ceeEEEEEeCCCCCCCCCCCEEEEecCCCcc
Q 019049           29 EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS----DYSGTVDAVGPNVSNFKVGDTVCGFAALGSF  104 (347)
Q Consensus        29 ~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~  104 (347)
                      ...+..+++++|+||..|.+.+|--...+....+...-.|..+|.    ..+|+|++  |+.+++++||.|+++.   +|
T Consensus        29 ~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~---gW  103 (343)
T KOG1196|consen   29 VELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV---GW  103 (343)
T ss_pred             ecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---cc
Confidence            333333589999999999999987655443332221223444553    56888888  5778999999999997   79


Q ss_pred             eeeEeeeCCC--eeeCC--CCCCHHH-HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE
Q 019049          105 AQFIVADQSE--LFPVP--KGCDLLA-AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA  179 (347)
Q Consensus       105 ~~~~~~~~~~--~~~~p--~~~~~~~-aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~  179 (347)
                      .+|.++++..  .++++  .++++.- ...+.++.+|||.++.+....+.|++|+|.||+|.+|.++.|+|+.+|++|+.
T Consensus       104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVG  183 (343)
T KOG1196|consen  104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVG  183 (343)
T ss_pred             eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEE
Confidence            9999998753  34444  3444443 34568899999999999999999999999999999999999999999999999


Q ss_pred             EecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCC-
Q 019049          180 VARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-  257 (347)
Q Consensus       180 ~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-  257 (347)
                      ++.+++|...++ ++|.+..+||+++..   ..+.++.+.+.++|+.||.+|+..+...+..|+..||++.+|..+... 
T Consensus       184 saGS~EKv~ll~~~~G~d~afNYK~e~~---~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~  260 (343)
T KOG1196|consen  184 SAGSKEKVDLLKTKFGFDDAFNYKEESD---LSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNL  260 (343)
T ss_pred             ecCChhhhhhhHhccCCccceeccCccC---HHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccc
Confidence            999999999997 579999999999865   677777788999999999999999999999999999999999766321 


Q ss_pred             --C--CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeE
Q 019049          258 --P--VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV  333 (347)
Q Consensus       258 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~  333 (347)
                        +  ......++.|++.+.++....+....    .+.++.+..++++|+|+...+-.-.|++.++||.-|.+++..||.
T Consensus       261 ~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~----~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKq  336 (343)
T KOG1196|consen  261 ENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY----PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQ  336 (343)
T ss_pred             cCCccccchhhheeeeEEeeeEEeechhhhh----HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccce
Confidence              1  12335678999999997766654333    578899999999999998776677899999999999999999999


Q ss_pred             EEEeCC
Q 019049          334 MIAFDD  339 (347)
Q Consensus       334 vv~~~~  339 (347)
                      ++++..
T Consensus       337 iv~va~  342 (343)
T KOG1196|consen  337 LVKVAR  342 (343)
T ss_pred             EEEeec
Confidence            999865

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.2e-32  Score=236.29  Aligned_cols=236  Identities=38%  Similarity=0.567  Sum_probs=204.1

Q ss_pred             eEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec-------------------
Q 019049           39 AVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-------------------   99 (347)
Q Consensus        39 eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------   99 (347)
                      ||+|++.++++|+.|+..+.|..+....+|.++|+|++|+|+++|++++.|++||+|+++.                   
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            6899999999999999999887653345678899999999999999999999999999875                   


Q ss_pred             ----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 019049          100 ----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA  175 (347)
Q Consensus       100 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~  175 (347)
                          ..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++|+|+|+++ +|++++++++..|.
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~  159 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA  159 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence                2589999999999999999999999999999999999999997777779999999999966 99999999999999


Q ss_pred             EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC
Q 019049          176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       176 ~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +|+++++++++.+.++++|++.+++....+.   .+.+. .+.+.++|+++++++. .....++++++++|+++.++...
T Consensus       160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         160 RVIVTDRSDEKLELAKELGADHVIDYKEEDL---EEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             eEEEEcCCHHHHHHHHHhCCceeccCCcCCH---HHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence            9999999999999999999988888776665   33444 5566789999999998 77788999999999999998765


Q ss_pred             CCCCCcchhHhhhcceEEEEEEecc
Q 019049          255 GEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      ...........+.+++++.++....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         236 GGPPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             CCCCcccHHHHHhcceEEEEeecCC
Confidence            4433233445678899999987655

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=3.7e-33  Score=262.73  Aligned_cols=295  Identities=23%  Similarity=0.311  Sum_probs=260.3

Q ss_pred             CCCeEEEEEEEecCChhhHHHHhccCCCCC------CCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEe
Q 019049           36 SSTAVRVRVKATSLNYANYLQILGKYQEKP------PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIV  109 (347)
Q Consensus        36 ~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~  109 (347)
                      .++.=+--|.|+.+|..|++...|+.+--.      .....+|-|++|+          .+.|.||+++.+-.++++.+.
T Consensus      1443 ~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mvpAksLATt~l 1512 (2376)
T KOG1202|consen 1443 CPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMVPAKSLATTVL 1512 (2376)
T ss_pred             CCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEeeehhhhhhhhh
Confidence            467777889999999999999999874211      1245789999888          688999999998889999999


Q ss_pred             eeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          110 ADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       110 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      ++.++++.+|.+.++++|++.|+-|.|+|++|...+.+++|++||||+++|++|++++.+|.++|++||.|+.+++|+++
T Consensus      1513 ~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRef 1592 (2376)
T KOG1202|consen 1513 ASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREF 1592 (2376)
T ss_pred             cchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHh
Q 019049          190 LKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA  265 (347)
Q Consensus       190 ~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  265 (347)
                      ++.    +-..++.|+++.++   .+-+++.|.|+|+|+|+|....+.++.+++||+..|||..+|.......+.-....
T Consensus      1593 L~~rFPqLqe~~~~NSRdtsF---Eq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMav 1669 (2376)
T KOG1202|consen 1593 LLKRFPQLQETNFANSRDTSF---EQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAV 1669 (2376)
T ss_pred             HHHhchhhhhhcccccccccH---HHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhhh
Confidence            964    34677888888888   77889999999999999999999999999999999999999976544333333467


Q ss_pred             hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCCCc
Q 019049          266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSI  343 (347)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~~~  343 (347)
                      +.++.+++|..+........+.+++...-+.+-+++|.++|..+++|+-.++++||+.|.+++++||+|+++-.++..
T Consensus      1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~eE~~ 1747 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAEEPA 1747 (2376)
T ss_pred             hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcccccc
Confidence            899999999999888877766677777777777888999999999999999999999999999999999999776654

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=1.9e-29  Score=220.50  Aligned_cols=251  Identities=25%  Similarity=0.339  Sum_probs=202.8

Q ss_pred             CCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc
Q 019049           66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA  145 (347)
Q Consensus        66 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~  145 (347)
                      ++|.++|||++|+|+++|++++++++||+|+++.   .|++|++++.+.++++|+++++.+++.+ ..+++||+++ ..+
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~   93 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDA   93 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC---CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-Hhc
Confidence            5789999999999999999999999999999974   6999999999999999999999999888 8899999998 478


Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      +++++++++|+|+ |.+|++++++|+.+|++ |+++++++++.+.++++| ++.+++...           ..+.+.++|
T Consensus        94 ~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d  161 (277)
T cd08255          94 EPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGAD  161 (277)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCC
Confidence            9999999999975 99999999999999998 999999999999889999 555443221           112456899


Q ss_pred             EEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc---hhHHHHHHHHHHHH
Q 019049          224 VLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP---HVLEDSLRELLLWA  299 (347)
Q Consensus       224 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l  299 (347)
                      ++|||++. .....++++++++|+++.+|..... .......+..+..++.+..........+   ....+.++++++++
T Consensus       162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (277)
T cd08255         162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL  240 (277)
T ss_pred             EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence            99999885 5668899999999999999876543 2222223444666777766544322221   12236788999999


Q ss_pred             HcCceeeeeceeeChhhHHHHHHHHHcC-CcceeEE
Q 019049          300 AKGLITIHISHTYSPSEANLAFSAIEDR-KVIGKVM  334 (347)
Q Consensus       300 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~v  334 (347)
                      .++.+++.+.+.|++++++++++.+.++ ....|++
T Consensus       241 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         241 AEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             HcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence            9999987788899999999999999876 3344654

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.78  E-value=4.7e-18  Score=130.95  Aligned_cols=128  Identities=37%  Similarity=0.576  Sum_probs=114.0

Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC-ccchHHHHh
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLK  239 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~  239 (347)
                      ++|++++|+|+..|++|++++++++|++.++++|+++++++++.++   .+.+.+.+++.++|++|||+| ...++.+++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~---~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDF---VEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSH---HHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhccccccccccccc---ccccccccccccceEEEEecCcHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999887   778888888889999999999 578899999


Q ss_pred             ccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHH
Q 019049          240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA  300 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  300 (347)
                      +++++|+++.+|........++...++.+++++.+++.++         ++.+++.++++.
T Consensus        78 ~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~la  129 (130)
T PF00107_consen   78 LLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---------PEDFQEALQLLA  129 (130)
T ss_dssp             HEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---------HHHHHHHHHHHH
T ss_pred             HhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---------HHHHHHHHHHhc
Confidence            9999999999998885555577788999999999998776         466777776664

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.75  E-value=3.1e-18  Score=127.37  Aligned_cols=82  Identities=34%  Similarity=0.543  Sum_probs=69.7

Q ss_pred             CCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE-------------------
Q 019049           37 STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-------------------   97 (347)
Q Consensus        37 ~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-------------------   97 (347)
                      |+||+|||.++|+|++|++.+.+.......+|.++|||++|+|+++|+++++|++||+|+.                   
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            6999999999999999999999864445678999999999999999999999999999963                   


Q ss_pred             --------ecCCCcceeeEeeeCCCeeeC
Q 019049           98 --------FAALGSFAQFIVADQSELFPV  118 (347)
Q Consensus        98 --------~~~~g~~~~~~~~~~~~~~~~  118 (347)
                              +..+|+|++|+++++++++|+
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                    123499999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.53  E-value=1.2e-14  Score=111.38  Aligned_cols=124  Identities=29%  Similarity=0.390  Sum_probs=81.0

Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC--ccch-HHHHhccccCCEEEEEeecCCCCCCcchhHhhhcc
Q 019049          193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG--GKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKN  269 (347)
Q Consensus       193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  269 (347)
                      |||++++|+++.++          +...++|+||||+|  .+.+ ..++++| ++|+++.++.      .........+.
T Consensus         1 LGAd~vidy~~~~~----------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRDTDF----------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTCSHH----------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHC
T ss_pred             CCcCEEecCCCccc----------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcc
Confidence            68999999995443          45689999999999  5433 6777888 9999998873      11111111222


Q ss_pred             eEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ..+....+......  ....+.++++.+++.+|++++.+.++|+++++++|++.+.+++..||+||
T Consensus        64 ~~~~~~~~~~~~~~--~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPN--AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--H--HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCC--chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            33333332211000  22356799999999999999999999999999999999999999999996

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.48  E-value=5.6e-12  Score=116.46  Aligned_cols=253  Identities=18%  Similarity=0.166  Sum_probs=152.9

Q ss_pred             CeEEEEEEEe-cCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCC----CCCCCCCCEEEEecCCCccee------
Q 019049           38 TAVRVRVKAT-SLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN----VSNFKVGDTVCGFAALGSFAQ------  106 (347)
Q Consensus        38 ~eV~i~v~~~-~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~----v~~~~~Gd~V~~~~~~g~~~~------  106 (347)
                      .+|+|+--|+ +.+.+|-.....+-..... .-+.  + +-+|..+..-    +..++.|+.++++-+...-.+      
T Consensus        31 ~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~-~~v~--~-~diilkV~~P~~~e~~~l~~g~~li~~l~p~~~~~l~~~l~  106 (509)
T PRK09424         31 FEVVVESGAGQLASFDDAAYREAGAEIVDG-AAVW--Q-SDIILKVNAPSDDEIALLREGATLVSFIWPAQNPELLEKLA  106 (509)
T ss_pred             CEEEEeCCCCcCCCCCHHHHHHCCCEEecC-cccc--c-CCEEEEeCCCCHHHHHhcCCCCEEEEEeCcccCHHHHHHHH
Confidence            6788887754 3455676544322111001 1112  2 4566655433    346999999999865321111      


Q ss_pred             ---eEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHH----hc----------CCCCCCEEEEecCCchHHHHHHHH
Q 019049          107 ---FIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH----RA----------QLSSGQVLLVLGAAGGVGVAAVQI  169 (347)
Q Consensus       107 ---~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~----~~----------~~~~~~~VlI~g~~g~~G~~~~~l  169 (347)
                         ...+..+.+-++.+.-++....  +++-...|.++..    ..          +..++++|+|+|+ |.+|+++++.
T Consensus       107 ~~~it~ia~e~vpr~sraq~~d~ls--sma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~Ai~~  183 (509)
T PRK09424        107 ARGVTVLAMDAVPRISRAQSLDALS--SMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAIGA  183 (509)
T ss_pred             HcCCEEEEeecccccccCCCccccc--chhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHHHHH
Confidence               1223334444444333322211  2223333444322    21          2357999999999 9999999999


Q ss_pred             HHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCc---------h-hhHHHHHHH-hc-CCcccEEEeCCCcc----
Q 019049          170 GKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESV---------I-PSVKEFLKA-RK-LKGVDVLYDPVGGK----  232 (347)
Q Consensus       170 a~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~---------~-~~~~~~~~~-~~-~~~~d~v~d~~g~~----  232 (347)
                      |+.+|++|++++.+++|++.++++|++++ ++..+.+.         . +..+...+. .+ ..++|++|+|++.+    
T Consensus       184 Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~a  263 (509)
T PRK09424        184 AGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPA  263 (509)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccC
Confidence            99999999999999999999999999854 55433211         0 111222222 11 14799999999963    


Q ss_pred             --c-hHHHHhccccCCEEEEEeecCCCC--CCcchhHhhh-cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049          233 --L-TKESLKLLNWGAQILVIGFASGEI--PVIPANIALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       233 --~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                        . .+++++.++++|++++++...+..  ...+...++. +++++.|..-  +    |   .+.-.+..+++.++.++.
T Consensus       264 P~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~----P---~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        264 PKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L----P---SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             cchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C----c---hhHHHHHHHHHHhCCccH
Confidence              3 488999999999999999853321  2233344555 7888888652  1    1   133345788888888764

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.42  E-value=5.4e-12  Score=113.75  Aligned_cols=175  Identities=17%  Similarity=0.133  Sum_probs=131.7

Q ss_pred             HHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          138 HVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       138 ~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.|.+.++.+|+..+ +         .++..  
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~---------~~e~v--  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T---------MEEAV--  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c---------HHHHH--
Confidence            445444433 368999999999 999999999999999999999999999999999998543 1         11111  


Q ss_pred             hcCCcccEEEeCCCcc-chHH-HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH-
Q 019049          217 RKLKGVDVLYDPVGGK-LTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR-  293 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~-~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  293 (347)
                         .++|++|+|+|.+ .+.. .+++++++|+++.+|...   ..++...+..+++++.++......        ..++ 
T Consensus       256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~---~eId~~~L~~~el~i~g~~~~~~~--------~~~~~  321 (413)
T cd00401         256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFD---VEIDVKGLKENAVEVVNIKPQVDR--------YELPD  321 (413)
T ss_pred             ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCC---CccCHHHHHhhccEEEEccCCcce--------EEcCC
Confidence               3679999999985 4555 489999999999998542   236666778888888887654311        1233 


Q ss_pred             -HHHHHHHcCce-e--eeecee-----eChh-hHHHHHHHHHcCCc-ceeEEEEeCC
Q 019049          294 -ELLLWAAKGLI-T--IHISHT-----YSPS-EANLAFSAIEDRKV-IGKVMIAFDD  339 (347)
Q Consensus       294 -~~~~~l~~g~l-~--~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gk~vv~~~~  339 (347)
                       +.+.++.+|.+ +  ..+++.     ++|+ |+.++++.+.++.. .-|+++.+..
T Consensus       322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~  378 (413)
T cd00401         322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK  378 (413)
T ss_pred             cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence             67899999998 4  347778     8999 99999999987654 2467666543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.75  E-value=4.1e-07  Score=84.28  Aligned_cols=213  Identities=17%  Similarity=0.174  Sum_probs=123.4

Q ss_pred             CeEEEEEEEec-CChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCC----CCCCCCCCEEEEecCCCcce-------
Q 019049           38 TAVRVRVKATS-LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN----VSNFKVGDTVCGFAALGSFA-------  105 (347)
Q Consensus        38 ~eV~i~v~~~~-i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~----v~~~~~Gd~V~~~~~~g~~~-------  105 (347)
                      .+|+|+--|+. .+.+|.......-.....  ... . -+.+|..|..-    +..++.|+.++++.+...-.       
T Consensus        30 ~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~--~~~-~-~adiIlkV~~P~~~e~~~l~~g~tli~~l~p~~n~~ll~~l~  105 (511)
T TIGR00561        30 FDVLVETGAGAKASFADRAFESAGAGIVDG--TLF-W-QSDIILKVNAPSDAEIAELPAGKALVSFIWPAQNPELMEKLA  105 (511)
T ss_pred             CEEEEECCCCcCCCcCHHHHHHcCCEEecc--cch-h-cCCEEEEeCCCCHHHHHhcCCCCEEEEEcCccCCHHHHHHHH
Confidence            67888777543 355676544322110000  001 1 24566666433    35599999999987532111       


Q ss_pred             --eeEeeeCCCeeeCCCCCCHHHHcc--CcchHHHHHHHHHHhcC----------CCCCCEEEEecCCchHHHHHHHHHH
Q 019049          106 --QFIVADQSELFPVPKGCDLLAAAA--LPVAFGTSHVALVHRAQ----------LSSGQVLLVLGAAGGVGVAAVQIGK  171 (347)
Q Consensus       106 --~~~~~~~~~~~~~p~~~~~~~aa~--l~~~~~~a~~~l~~~~~----------~~~~~~VlI~g~~g~~G~~~~~la~  171 (347)
                        ....+..+.+-++.+.-++.....  -...+.....+.....+          -.++++|+|.|+ |.+|+++++.++
T Consensus       106 ~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGa-G~iGl~Aa~~ak  184 (511)
T TIGR00561       106 AKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAIGAAN  184 (511)
T ss_pred             HcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHHHhhhhcCCceecCCCCCCCEEEEECC-CHHHHHHHHHHH
Confidence              111222233333332211111110  01122333333222222          235789999999 999999999999


Q ss_pred             HcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCC-----C----c-hhhHHHHHHHhc--CCcccEEEeCC---Cc--c-
Q 019049          172 VCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNE-----S----V-IPSVKEFLKARK--LKGVDVLYDPV---GG--K-  232 (347)
Q Consensus       172 ~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~-----~----~-~~~~~~~~~~~~--~~~~d~v~d~~---g~--~-  232 (347)
                      .+|++|++++.+.++++.++++|++.+. +..+.     .    . .+..+...+.+.  ..++|++|+|+   |.  + 
T Consensus       185 ~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~  264 (511)
T TIGR00561       185 SLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPK  264 (511)
T ss_pred             HCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCe
Confidence            9999999999999999999999987632 22110     0    0 111222222222  35799999999   54  3 


Q ss_pred             -chHHHHhccccCCEEEEEeecCC
Q 019049          233 -LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       233 -~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                       ..+..++.+++++.+++++...+
T Consensus       265 Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       265 LITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             eehHHHHhhCCCCCEEEEeeeCCC
Confidence             35788999999999999986654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.64  E-value=3.7e-06  Score=73.68  Aligned_cols=95  Identities=22%  Similarity=0.355  Sum_probs=75.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+++|+|+|. |.+|..+++.++.+|++|+++++++++.+.++++|+..+.          ...+.+..  ..+|+||+|
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~----------~~~l~~~l--~~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH----------LSELAEEV--GKIDIIFNT  217 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec----------HHHHHHHh--CCCCEEEEC
Confidence            5889999999 9999999999999999999999999888888888865431          11122222  368999999


Q ss_pred             CCccch-HHHHhccccCCEEEEEeecCCC
Q 019049          229 VGGKLT-KESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       229 ~g~~~~-~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      ++...+ ...++.+++++.+++++...+.
T Consensus       218 ~p~~~i~~~~l~~~~~g~vIIDla~~pgg  246 (296)
T PRK08306        218 IPALVLTKEVLSKMPPEALIIDLASKPGG  246 (296)
T ss_pred             CChhhhhHHHHHcCCCCcEEEEEccCCCC
Confidence            986544 5678899999999998766554

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.46  E-value=1.3e-06  Score=75.98  Aligned_cols=170  Identities=18%  Similarity=0.251  Sum_probs=100.7

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH-
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA-  216 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~-  216 (347)
                      .+.+.++++||.+|+ |. |..+.++++..|.  +|++++.+++.++.+++.    |...+ .....++       ... 
T Consensus        72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~-------~~l~  141 (272)
T PRK11873         72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEI-------EALP  141 (272)
T ss_pred             hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcch-------hhCC
Confidence            467889999999998 66 8888888887765  699999999988888653    33221 1111111       111 


Q ss_pred             hcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          217 RKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       217 ~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      ...+.||+|+....     +  ..++.+.+.|+++|++++.+......  .+  ..+.+...+.+......         
T Consensus       142 ~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~---------  208 (272)
T PRK11873        142 VADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGA---------  208 (272)
T ss_pred             CCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCC---------
Confidence            12347999985431     2  45788999999999999977554221  11  11222222221111110         


Q ss_pred             HHHHHHHHHHHc-Ccee--eeeceeeChhhHHHHHHHH--HcCCcceeEEEE
Q 019049          290 DSLRELLLWAAK-GLIT--IHISHTYSPSEANLAFSAI--EDRKVIGKVMIA  336 (347)
Q Consensus       290 ~~~~~~~~~l~~-g~l~--~~~~~~~~~~~~~~a~~~~--~~~~~~gk~vv~  336 (347)
                      ...+++.+++.+ |-..  ......+++++..++++.+  ..+...++.+..
T Consensus       209 ~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  260 (272)
T PRK11873        209 LQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS  260 (272)
T ss_pred             CCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence            112334455554 3222  3455678899999999988  555544555433

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.44  E-value=3.5e-06  Score=76.72  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=79.4

Q ss_pred             HHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049          137 SHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       137 a~~~l~~~~~~~-~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      .|+++.+..++. .|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+. +.+         ..+.. 
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~---------l~eal-  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT---------MEEAA-  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC---------HHHHH-
Confidence            456665443544 8999999999 9999999999999999999999988887766666754 221         12222 


Q ss_pred             HhcCCcccEEEeCCCcc-chH-HHHhccccCCEEEEEeecCC
Q 019049          216 ARKLKGVDVLYDPVGGK-LTK-ESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~~  255 (347)
                          .++|++++|+|.. .+. ..+..+++++.++.+|....
T Consensus       266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence                3689999999974 454 68899999999999986654

>PLN02494 adenosylhomocysteinase

Probab=98.26  E-value=1.6e-05  Score=72.61  Aligned_cols=101  Identities=18%  Similarity=0.253  Sum_probs=78.5

Q ss_pred             HHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          138 HVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       138 ~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+..+      +    ..+..  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~----leEal--  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------T----LEDVV--  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------c----HHHHH--
Confidence            4455444333 57999999999 999999999999999999999998887777777776532      1    22222  


Q ss_pred             hcCCcccEEEeCCCccc--hHHHHhccccCCEEEEEeecC
Q 019049          217 RKLKGVDVLYDPVGGKL--TKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~~  254 (347)
                         ...|++++|+|...  ....++.|++++.++.+|...
T Consensus       308 ---~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        308 ---SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ---hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence               25799999999753  378999999999999998754

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.24  E-value=1.8e-05  Score=71.73  Aligned_cols=102  Identities=21%  Similarity=0.240  Sum_probs=77.2

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049          137 SHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       137 a~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      .+.++.+..+ .-.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+. +.+         .++.. 
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~---------leeal-  248 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT---------MEEAA-  248 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC---------HHHHH-
Confidence            3444434333 368999999999 9999999999999999999999888877777777763 221         11111 


Q ss_pred             HhcCCcccEEEeCCCccc-hH-HHHhccccCCEEEEEeecC
Q 019049          216 ARKLKGVDVLYDPVGGKL-TK-ESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  254 (347)
                          .+.|++|+++|... +. ..+..+++++.++.+|...
T Consensus       249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence                35799999999854 44 5889999999999988654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.13  E-value=7.1e-05  Score=65.27  Aligned_cols=95  Identities=18%  Similarity=0.295  Sum_probs=71.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++++|+|. |.+|..++..++.+|++|++.+++.++.+.+.+.|...+ .         ...+.+..  ..+|++++|
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~---------~~~l~~~l--~~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P---------LNKLEEKV--AEIDIVINT  216 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c---------HHHHHHHh--ccCCEEEEC
Confidence            4789999999 999999999999999999999999888777777775422 1         11122222  478999999


Q ss_pred             CCccch-HHHHhccccCCEEEEEeecCCC
Q 019049          229 VGGKLT-KESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       229 ~g~~~~-~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      ++...+ ...++.++++..++.++...+.
T Consensus       217 ~P~~ii~~~~l~~~k~~aliIDlas~Pg~  245 (287)
T TIGR02853       217 IPALVLTADVLSKLPKHAVIIDLASKPGG  245 (287)
T ss_pred             CChHHhCHHHHhcCCCCeEEEEeCcCCCC
Confidence            986544 5577889998888888655433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.07  E-value=0.00092  Score=58.16  Aligned_cols=239  Identities=15%  Similarity=0.131  Sum_probs=130.0

Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCe----------------------eeCCCCC----C
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSEL----------------------FPVPKGC----D  123 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~----------------------~~~p~~~----~  123 (347)
                      +|-..+ +.|++  |++.++.+|.||+|+.+.   ++|+++.+..+                      .+++.+-    +
T Consensus        33 vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~---ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~  106 (314)
T PF11017_consen   33 VPVWGF-ATVVE--SRHPGIAVGERLYGYFPM---ASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPE  106 (314)
T ss_pred             cccceE-EEEEe--eCCCCccCccEEEeeccc---cceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcc
Confidence            333434 56666  889999999999998753   23333332111                      1222111    2


Q ss_pred             HHHH-ccCcchHHHHHHHHHHhcC---CCCCCEEEEecCCchHHHHHHHHHH-Hc-CCEEEEEecChhhHHHHHhcC-Cc
Q 019049          124 LLAA-AALPVAFGTSHVALVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGK-VC-GATIIAVARGAEKIKFLKSLG-VD  196 (347)
Q Consensus       124 ~~~a-a~l~~~~~~a~~~l~~~~~---~~~~~~VlI~g~~g~~G~~~~~la~-~~-g~~V~~~~~~~~~~~~~~~~g-~~  196 (347)
                      .+.. +.+--.+.|.|. |.+...   --..+.|+|..|++-.++.++..++ .. +.+++.+++.++ ..+.+.+| .+
T Consensus       107 ~e~~~~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-~~Fve~lg~Yd  184 (314)
T PF11017_consen  107 REDWQMLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-VAFVESLGCYD  184 (314)
T ss_pred             hhHHHHHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-hhhhhccCCce
Confidence            2222 223334455553 323222   2234689999999999999998888 34 458999997665 56888898 67


Q ss_pred             EEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCC-EEEEEeecCCCCCCcchhHhhhcceEEEE
Q 019049          197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGA-QILVIGFASGEIPVIPANIALVKNWTVHG  274 (347)
Q Consensus       197 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  274 (347)
                      .++.|++-+-      +    ....--+++|+.|+. ....+.+.++..= ..+.+|.......... .. +.. .+-.-
T Consensus       185 ~V~~Yd~i~~------l----~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~-~~-l~g-~~~~~  251 (314)
T PF11017_consen  185 EVLTYDDIDS------L----DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAP-AD-LPG-PRPEF  251 (314)
T ss_pred             EEeehhhhhh------c----cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCcc-cc-CCC-CCcEE
Confidence            7877765322      1    123456889999984 4455556665542 4556664432211000 00 000 00111


Q ss_pred             EEecccc-----ccCchhHHHHHHHHHHHHHcCcee-eeeceeeChhhHHHHHHHHHcCCc
Q 019049          275 LYWGSYK-----IHRPHVLEDSLRELLLWAAKGLIT-IHISHTYSPSEANLAFSAIEDRKV  329 (347)
Q Consensus       275 ~~~~~~~-----~~~~~~~~~~~~~~~~~l~~g~l~-~~~~~~~~~~~~~~a~~~~~~~~~  329 (347)
                      ++.....     ...++...+.+.+.++-+.+.... ..+...-..+.+.++++.+.+++.
T Consensus       252 FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  252 FFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             EeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence            1111111     111222223333333333333333 357778899999999999988764

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.06  E-value=0.0001  Score=67.74  Aligned_cols=99  Identities=18%  Similarity=0.269  Sum_probs=74.5

Q ss_pred             HHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          139 VALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       139 ~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .++.+..+ .-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|+..+      +    ..+..   
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~----leell---  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------T----LEDVV---  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------c----HHHHH---
Confidence            44434333 347999999999 999999999999999999999888776655555665422      1    22222   


Q ss_pred             cCCcccEEEeCCCcc-ch-HHHHhccccCCEEEEEeec
Q 019049          218 KLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       218 ~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                        ...|+++.++|.. .+ ...+..|++++.++.+|..
T Consensus       308 --~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        308 --ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             --hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence              3689999999874 34 5789999999999998855

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.01  E-value=0.00014  Score=65.93  Aligned_cols=97  Identities=24%  Similarity=0.337  Sum_probs=70.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +.+|+|+|+ |.+|+.+++.++.+|++|+++++++++.+.+.. ++........+      .+.+.+..  ..+|++|+|
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l--~~aDvVI~a  237 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAV--KRADLLIGA  237 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHH--ccCCEEEEc
Confidence            456999999 999999999999999999999999888777754 55432222211      12222222  368999999


Q ss_pred             C---Cc--cc--hHHHHhccccCCEEEEEeecCC
Q 019049          229 V---GG--KL--TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       229 ~---g~--~~--~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +   +.  +.  ....++.+++++.++.++...+
T Consensus       238 ~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~G  271 (370)
T TIGR00518       238 VLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQG  271 (370)
T ss_pred             cccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence            7   32  32  3778889999999999986644

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.01  E-value=2.1e-05  Score=75.68  Aligned_cols=97  Identities=16%  Similarity=0.310  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC---------------------hhhHHHHHhcCCcEEEeCCC-
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---------------------AEKIKFLKSLGVDHVVDLSN-  203 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~---------------------~~~~~~~~~~g~~~v~~~~~-  203 (347)
                      ...+|++|+|+|+ |++|+++++.++..|++|++++..                     +.+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            3578999999999 999999999999999999999842                     34667788899887776443 


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEE
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVI  250 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  250 (347)
                      .+..  ....     ..++|++|+++|... ....+......|.+..+
T Consensus       212 ~~~~--~~~~-----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        212 EDIT--LEQL-----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             CcCC--HHHH-----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence            2221  1111     136899999999743 23333444445554443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.00  E-value=3.8e-05  Score=63.62  Aligned_cols=80  Identities=26%  Similarity=0.488  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC----cEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV----DHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~----~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++.++|.||++++|.+.++.+...|++|+.+.++.+|++.+. +++.    ...+|..+..-   .+...+..  ..+.
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~---~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAA---VEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHH---HHHHHHHHHHhhCc
Confidence            4578999999999999999999999999999999999998885 5772    23344444322   23333321  2357


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+.++.+|-
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999999984

>PRK08324 short chain dehydrogenase; Validated

Probab=97.97  E-value=4.1e-05  Score=75.38  Aligned_cols=115  Identities=23%  Similarity=0.353  Sum_probs=74.7

Q ss_pred             CcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 019049          102 GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA  181 (347)
Q Consensus       102 g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~  181 (347)
                      .++++|..+++..++.+ +..+++++.....+          ..+..+|+++||+|++|++|..+++.+...|++|++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            45667777777766666 56666666421100          12233688999999999999999999999999999999


Q ss_pred             cChhhHHHHH-hcCC---c--EEEeCCCCCchhhHHHHHHHh--cCCcccEEEeCCC
Q 019049          182 RGAEKIKFLK-SLGV---D--HVVDLSNESVIPSVKEFLKAR--KLKGVDVLYDPVG  230 (347)
Q Consensus       182 ~~~~~~~~~~-~~g~---~--~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d~~g  230 (347)
                      ++.++.+.+. +++.   .  ...|..+.+   +++...+..  ..+++|++|+++|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~---~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEA---AVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHH---HHHHHHHHHHHHcCCCCEEEECCC
Confidence            9988766553 3432   1  112333322   133333221  1347999999998

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.95  E-value=0.00011  Score=62.37  Aligned_cols=81  Identities=30%  Similarity=0.399  Sum_probs=59.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC----C-cEEE--eCCCCCchhhHHHHHHHhc-
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG----V-DHVV--DLSNESVIPSVKEFLKARK-  218 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g----~-~~v~--~~~~~~~~~~~~~~~~~~~-  218 (347)
                      ..+++++|+||++++|...+..+...|++++.+.|+.+|++.++ ++.    . .+++  |..+.+-   ...+..... 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~---~~~l~~~l~~   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEA---LERLEDELKE   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhH---HHHHHHHHHh
Confidence            46789999999999999999999999999999999999988774 332    1 1233  3333332   444444333 


Q ss_pred             -CCcccEEEeCCCc
Q 019049          219 -LKGVDVLYDPVGG  231 (347)
Q Consensus       219 -~~~~d~v~d~~g~  231 (347)
                       +..+|+.+|++|-
T Consensus        81 ~~~~IdvLVNNAG~   94 (265)
T COG0300          81 RGGPIDVLVNNAGF   94 (265)
T ss_pred             cCCcccEEEECCCc
Confidence             3479999999984

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.92  E-value=0.00016  Score=58.86  Aligned_cols=113  Identities=17%  Similarity=0.269  Sum_probs=79.3

Q ss_pred             HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHhcCCcEEEe-
Q 019049          126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVDHVVD-  200 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~~~~g~~~v~~-  200 (347)
                      ..-++..+.+.|.  +.+...++++++||-+|+  +.|+.++-+++.-| +|+.+++.++=.    +.++.+|...+.. 
T Consensus        51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~  125 (209)
T COG2518          51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVR  125 (209)
T ss_pred             CCceecCcHHHHH--HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence            3344444555555  347889999999999996  67999999998888 999999987733    3345678643332 


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEe
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ..+...        .......||.|+-+.+.+.. ..+++.|+++|+++..-
T Consensus       126 ~gDG~~--------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         126 HGDGSK--------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             ECCccc--------CCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence            222211        11123679999998887766 66789999999999853

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.92  E-value=9.5e-05  Score=65.46  Aligned_cols=108  Identities=25%  Similarity=0.290  Sum_probs=76.3

Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhH-
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL---SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI-  187 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~-  187 (347)
                      ...+++|+.+..+.++.. .+.+.++.++......   -++.+|+|.|+ |.+|..+++.++..|+ +|+++++++++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            356778888888877665 4667777776332221   36899999999 9999999999998876 799999998875 


Q ss_pred             HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049          188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  234 (347)
Q Consensus       188 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  234 (347)
                      +.++++|+. +.+..         ...+..  ..+|+||.|++.+..
T Consensus       217 ~la~~~g~~-~~~~~---------~~~~~l--~~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD---------ELLELL--NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH---------HHHHHH--hcCCEEEECCCCCch
Confidence            556678873 33211         111111  357999999998654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.92  E-value=6.5e-05  Score=60.21  Aligned_cols=80  Identities=25%  Similarity=0.391  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcC---CcEEEeCCCCCchhhHHHHHHHhc--CCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG---VDHVVDLSNESVIPSVKEFLKARK--LKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~~~~~--~~~~d  223 (347)
                      .|.+|||.||++|+|+..++-...+|-+|+++.++.++++.++...   ...+.|..+.+-   ..++.++..  ....+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~---~~~lvewLkk~~P~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDS---RRELVEWLKKEYPNLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhh---HHHHHHHHHhhCCchh
Confidence            4779999999999999999999999999999999999999998643   334444444432   333444332  23579


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|-
T Consensus        81 vliNNAGI   88 (245)
T COG3967          81 VLINNAGI   88 (245)
T ss_pred             eeeecccc
Confidence            99999883

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.91  E-value=0.0003  Score=59.71  Aligned_cols=105  Identities=28%  Similarity=0.408  Sum_probs=68.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-Hhc---CCcEEEeCCCCCchhhHHHHHHHhc--CCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL---GVDHVVDLSNESVIPSVKEFLKARK--LKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~---g~~~v~~~~~~~~~~~~~~~~~~~~--~~~~  222 (347)
                      ++++|+|+|++|++|..+++.+...|++|+++++++++.+.+ ++.   +..+.+..+-.+ .+...+..+...  ..++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999998877655 222   222223222111 122333333221  2468


Q ss_pred             cEEEeCCCccc------------------------hHHHHhccccCCEEEEEeecC
Q 019049          223 DVLYDPVGGKL------------------------TKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       223 d~v~d~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      |.++.+.|...                        ++.++.+++++|+++.++...
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            99998887411                        233445667788999887654

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.89  E-value=0.00041  Score=59.51  Aligned_cols=141  Identities=20%  Similarity=0.266  Sum_probs=89.7

Q ss_pred             CCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHH
Q 019049           88 NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV  167 (347)
Q Consensus        88 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~  167 (347)
                      .+++||+++-..   .|.++.. +...++.++++++|..+. -+.+.. ....+.  ..+.++++||-.|+ |. |.+++
T Consensus        66 p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGc-Gs-G~l~i  135 (250)
T PRK00517         66 PIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGC-GS-GILAI  135 (250)
T ss_pred             CEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCC-cH-HHHHH
Confidence            377888766543   5666654 667889999998887654 211111 222221  12568899999998 54 77776


Q ss_pred             HHHHHcCC-EEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc----chHHHH
Q 019049          168 QIGKVCGA-TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK----LTKESL  238 (347)
Q Consensus       168 ~la~~~g~-~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~~  238 (347)
                      .++ ..|+ +|++++.++...+.+++.    +....+....              +...||+|+......    .+..+.
T Consensus       136 ~~~-~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~--------------~~~~fD~Vvani~~~~~~~l~~~~~  200 (250)
T PRK00517        136 AAA-KLGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ--------------GDLKADVIVANILANPLLELAPDLA  200 (250)
T ss_pred             HHH-HcCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc--------------CCCCcCEEEEcCcHHHHHHHHHHHH
Confidence            554 4677 699999999887777542    2211111000              011589998765543    346788


Q ss_pred             hccccCCEEEEEeec
Q 019049          239 KLLNWGAQILVIGFA  253 (347)
Q Consensus       239 ~~l~~~G~~v~~g~~  253 (347)
                      +.|+++|.+++.+..
T Consensus       201 ~~LkpgG~lilsgi~  215 (250)
T PRK00517        201 RLLKPGGRLILSGIL  215 (250)
T ss_pred             HhcCCCcEEEEEECc
Confidence            999999999987543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.86  E-value=0.0011  Score=53.90  Aligned_cols=93  Identities=24%  Similarity=0.277  Sum_probs=66.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-  231 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-  231 (347)
                      |+|.||+|.+|..+++.+...|.+|+++++++++.+.  ..+.. ++..+-.+    ...+....  .++|.||.+.|. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d----~~~~~~al--~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFD----PDSVKAAL--KGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTC----HHHHHHHH--TTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehh----hhhhhhhh--hhcchhhhhhhhh
Confidence            7999999999999999999999999999999998776  44443 33333322    33444444  379999999984 


Q ss_pred             ----cchHHHHhccccCC--EEEEEeecC
Q 019049          232 ----KLTKESLKLLNWGA--QILVIGFAS  254 (347)
Q Consensus       232 ----~~~~~~~~~l~~~G--~~v~~g~~~  254 (347)
                          .....+++.++..|  +++.++..+
T Consensus        72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             cccccccccccccccccccccceeeeccc
Confidence                23455566665554  777776554

...

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00014  Score=63.39  Aligned_cols=80  Identities=16%  Similarity=0.294  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh---cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR---KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~---~~~~~d~  224 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+...+...+ .|..+.+.   .+...+..   .++.+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPES---IAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHH---HHHHHHHHHHHcCCCccE
Confidence            46799999999999999999998899999999999888877766664432 23333221   33333221   1347899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        80 li~~Ag~   86 (277)
T PRK05993         80 LFNNGAY   86 (277)
T ss_pred             EEECCCc
Confidence            9999873

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.77  E-value=0.002  Score=55.48  Aligned_cols=80  Identities=31%  Similarity=0.440  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHH----HHHhcCCcEE---EeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIK----FLKSLGVDHV---VDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~----~~~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|++|++|..+++.+...|++ |++++++.++.+    .+++.+....   .|..+.   +++.+..+..  .
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~   81 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV---EDCRRVVAAADEA   81 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH---HHHHHHHHHHHHH
Confidence            5689999999999999999999999998 999998876544    2233443321   233322   2233333322  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|+++++.|.
T Consensus        82 ~g~id~li~~ag~   94 (260)
T PRK06198         82 FGRLDALVNAAGL   94 (260)
T ss_pred             hCCCCEEEECCCc
Confidence            2468999999874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.75  E-value=0.00027  Score=57.05  Aligned_cols=106  Identities=25%  Similarity=0.332  Sum_probs=72.1

Q ss_pred             CCCEEEEecC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC-cEEEeCCCCC-chhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGA-AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV-DHVVDLSNES-VIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~-~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~  224 (347)
                      ..+.|||.|+ .|++|.+.+.-....|+.|+++.++.++...+. .+|. ..-+|..+++ ..+...+++.. ..+..|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence            4568999987 678999999999999999999999988776665 6772 2334444433 33333344443 4568999


Q ss_pred             EEeCCCcc----ch-------HH----------------HHhccccCCEEEEEeecCC
Q 019049          225 LYDPVGGK----LT-------KE----------------SLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       225 v~d~~g~~----~~-------~~----------------~~~~l~~~G~~v~~g~~~~  255 (347)
                      .+|.+|.+    .+       ++                .-.+.+..|++|.+|...+
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~  142 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG  142 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence            99988742    10       11                1236677899999986654

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.75  E-value=0.00021  Score=62.26  Aligned_cols=78  Identities=28%  Similarity=0.447  Sum_probs=56.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCcccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d  227 (347)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+...+...+ .|..+.+.   .++..+..  ..+++|++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAA---LARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHH---HHHHHHHHHHhcCCCCEEEE
Confidence            479999999999999999999999999999998887776666554332 34443322   33333322  2347999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9983

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.74  E-value=9.6e-05  Score=56.85  Aligned_cols=93  Identities=24%  Similarity=0.317  Sum_probs=61.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCc--EEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.|+.+|.+.+. .++..  ....+.+.      .+.   .  ..+|+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~------~~~---~--~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL------EEA---L--QEADI   78 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH------CHH---H--HTESE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH------HHH---H--hhCCe
Confidence            5789999999 9999999999999999 5999999999877664 45322  23333221      111   1  36899


Q ss_pred             EEeCCCccch---HHHHhcccc-CCEEEEEeec
Q 019049          225 LYDPVGGKLT---KESLKLLNW-GAQILVIGFA  253 (347)
Q Consensus       225 v~d~~g~~~~---~~~~~~l~~-~G~~v~~g~~  253 (347)
                      +|+|++.+..   ...+....+ .+.++.++.+
T Consensus        79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   79 VINATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             EEEecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            9999987432   333333332 2567766543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06182 short chain dehydrogenase; Validated

Probab=97.71  E-value=0.00051  Score=59.75  Aligned_cols=80  Identities=31%  Similarity=0.430  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+...+... ..|..+.+.   ++...+..  ..+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEAS---IKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHH---HHHHHHHHHHhcCCCCEE
Confidence            4679999999999999999999889999999999988776665555332 234333222   33332211  23579999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999884

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.67  E-value=0.00091  Score=57.45  Aligned_cols=110  Identities=34%  Similarity=0.456  Sum_probs=71.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEe-CCCCCchhhHHHHHHH--hcCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVD-LSNESVIPSVKEFLKA--RKLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~-~~~~~~~~~~~~~~~~--~~~~  220 (347)
                      .|+.|+|.||++|+|.+++.-+-..|++++.+.+..++++.+    ++.+... ++. .-+..-.++.++..+.  ...+
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            678999999999999999988889999999988888877666    3344332 221 1111111223333322  2356


Q ss_pred             cccEEEeCCCcc--------------------------chHHHHhccccC--CEEEEEeecCCCCC
Q 019049          221 GVDVLYDPVGGK--------------------------LTKESLKLLNWG--AQILVIGFASGEIP  258 (347)
Q Consensus       221 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~  258 (347)
                      ++|+.+|.+|-.                          ....++..|+..  |+|+.++...+...
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~  156 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP  156 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC
Confidence            899999998831                          113344455444  99999987766543

>PRK12742 oxidoreductase; Provisional

Probab=97.66  E-value=0.0011  Score=56.20  Aligned_cols=103  Identities=23%  Similarity=0.350  Sum_probs=65.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .++++||+|++|++|..+++.+...|++|+.+.+ +.++.+.+ .+.+...+ ..+-.+. +.+.+....  .+++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~-~~D~~~~-~~~~~~~~~--~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAV-QTDSADR-DAVIDVVRK--SGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEE-ecCCCCH-HHHHHHHHH--hCCCcEEE
Confidence            4789999999999999999999999999988765 44444443 44554332 2222121 123333332  24689999


Q ss_pred             eCCCccc----h----------------------HHHHhccccCCEEEEEeecCC
Q 019049          227 DPVGGKL----T----------------------KESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       227 d~~g~~~----~----------------------~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +++|...    .                      ..++..++..|+++.++....
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence            9987411    0                      123344566789998876543

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00042  Score=62.03  Aligned_cols=80  Identities=26%  Similarity=0.437  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEE---EeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV---VDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|+|+++++|..+++.+...|++|+++++++++.+.+    ++.|....   .|..+.+   +++.+.+..  ..
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~~~~~~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDAD---QVKALATQAASFG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH---HHHHHHHHHHHhc
Confidence            568999999999999999999999999999999998876544    33454322   2333322   233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            579999999983

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.58  E-value=0.00059  Score=64.43  Aligned_cols=48  Identities=25%  Similarity=0.273  Sum_probs=41.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      ...+.+.|++|+|.||+|++|..+++.+...|++|++++++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            345667899999999999999999999999999999999998876544

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.0014  Score=56.56  Aligned_cols=80  Identities=23%  Similarity=0.342  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EE--EeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HV--VDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|.|+++++|..+++.+...|++|++++++.++.+.+. +++.. ..  .|..+.   +...+..+..  ..+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDD---AAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH---HHHHHHHHHHHHHhCCC
Confidence            4679999999999999999999999999999999887655543 44422 12  233322   1233332221  12468


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.0016  Score=58.48  Aligned_cols=80  Identities=25%  Similarity=0.387  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEE---EeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV---VDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+    ++.|....   .|..+.+   +++...+..  ..
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~---~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE---AVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH---HHHHHHHHHHHHC
Confidence            467999999999999999999999999999999988766544    33453322   2333322   233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++++++|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            478999999884

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.56  E-value=0.00069  Score=57.05  Aligned_cols=80  Identities=24%  Similarity=0.326  Sum_probs=56.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++++|+|++|++|...+..+...|++|+++++++++.+.+++++...++..+-.+ .++...+.+.....++|+++.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcCc
Confidence            5799999999999999998888999999999988776666555422222222111 223555555555567999998876


Q ss_pred             c
Q 019049          231 G  231 (347)
Q Consensus       231 ~  231 (347)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            3

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.54  E-value=0.0036  Score=53.70  Aligned_cols=117  Identities=21%  Similarity=0.326  Sum_probs=82.4

Q ss_pred             CCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC
Q 019049          120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV  195 (347)
Q Consensus       120 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~  195 (347)
                      +++++++|-      ..++..+..+.+++||++||=+|+  |.|.+++-+|+..|++|++++.++++.+.+++    .|.
T Consensus        49 ~~~tL~eAQ------~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl  120 (283)
T COG2230          49 PDMTLEEAQ------RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGL  120 (283)
T ss_pred             CCCChHHHH------HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCC
Confidence            344666664      335556668999999999999998  68999999999999999999999998877754    553


Q ss_pred             c---EEEeCCCCCchhhHHHHHHHhcCCcccEE-----EeCCCc----cchHHHHhccccCCEEEEEeecCCC
Q 019049          196 D---HVVDLSNESVIPSVKEFLKARKLKGVDVL-----YDPVGG----KLTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       196 ~---~v~~~~~~~~~~~~~~~~~~~~~~~~d~v-----~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      .   .+.-.+-.++            .+.||-|     |+.+|.    ..+..+.++|+++|++++.......
T Consensus       121 ~~~v~v~l~d~rd~------------~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~  181 (283)
T COG2230         121 EDNVEVRLQDYRDF------------EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPD  181 (283)
T ss_pred             CcccEEEecccccc------------ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCC
Confidence            3   1111111111            1237766     345565    2457788999999999987765543

>PRK06484 short chain dehydrogenase; Validated

Probab=97.52  E-value=0.012  Score=56.40  Aligned_cols=103  Identities=26%  Similarity=0.413  Sum_probs=68.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcE---EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDH---VVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||.|+++++|...++.+...|++|++++++.++.+.+.+ ++...   ..|..+.+   .++.+.+..  ..+.+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA---AVESAFAQIQARWGRL  344 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH---HHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999998887766653 44322   12333322   233333322  12478


Q ss_pred             cEEEeCCCcc----c-----------------------hHHHHhccccCCEEEEEeecC
Q 019049          223 DVLYDPVGGK----L-----------------------TKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       223 d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      |++++++|..    .                       .+.++..++.+|+++.++...
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~  403 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA  403 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            9999988731    0                       122234556679999987654

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.50  E-value=0.0024  Score=54.56  Aligned_cols=101  Identities=25%  Similarity=0.436  Sum_probs=61.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|++|++|..++..+...|++|+++.++.. +.+.+    +..+.. ..+  |..+.+   ....+.+..  .
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE---SVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH---HHHHHHHHHHHh
Confidence            4679999999999999999999889999999888653 23222    223322 122  333222   133332221  1


Q ss_pred             CCcccEEEeCCCcc--------------------chHHHHhccccCCEEEEEee
Q 019049          219 LKGVDVLYDPVGGK--------------------LTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       219 ~~~~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ..++|+++.++|..                    .++.+...+...|+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            24689998887631                    12334455556688888865

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00088  Score=59.06  Aligned_cols=80  Identities=24%  Similarity=0.385  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC--cEE---EeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHV---VDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~--~~v---~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.  ...   .|..+.+   +++...+..  ..+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~---~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA---AMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH---HHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999988876655 34542  111   2333322   132322221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|++++++|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            78999999984

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.46  E-value=0.0012  Score=61.21  Aligned_cols=149  Identities=19%  Similarity=0.257  Sum_probs=92.0

Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCE-EEEecC--------CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHH
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDT-VCGFAA--------LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVA  140 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~-V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  140 (347)
                      .-|+|+++-+.+|+++....-+|+. ++|...        .|......----...+++|..+..+.+ ....+.+.++.+
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~-i~~~~~Sv~~~A  169 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETG-IGAGAVSVASAA  169 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcC-CCCCCcCHHHHH
Confidence            4699999999999999877666664 322110        011111000000112344554443332 233456666767


Q ss_pred             HHHhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHH-HHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049          141 LVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       141 l~~~~~---~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      +.....   -.++++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+ +++++|.. +++.         ....+
T Consensus       170 v~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~---------~~~~~  238 (423)
T PRK00045        170 VELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL---------DELPE  238 (423)
T ss_pred             HHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH---------HHHHH
Confidence            643222   247789999999 9999999999999998 8999999988765 55677753 3221         11112


Q ss_pred             HhcCCcccEEEeCCCcc
Q 019049          216 ARKLKGVDVLYDPVGGK  232 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~  232 (347)
                      ..  .++|+||+|+|.+
T Consensus       239 ~l--~~aDvVI~aT~s~  253 (423)
T PRK00045        239 AL--AEADIVISSTGAP  253 (423)
T ss_pred             Hh--ccCCEEEECCCCC
Confidence            12  3689999999863

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.44  E-value=0.0022  Score=50.18  Aligned_cols=95  Identities=19%  Similarity=0.241  Sum_probs=65.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      -+-.|++++|.|- |-+|.-.++.++.+|++|++++.++-+.-.+..-|.... .         .++.   .  ...|++
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-~---------~~~a---~--~~adi~   82 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-T---------LEEA---L--RDADIF   82 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-----------HHHH---T--TT-SEE
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec-C---------HHHH---H--hhCCEE
Confidence            3458999999999 999999999999999999999999987777777776422 1         2222   1  467999


Q ss_pred             EeCCCccc-h-HHHHhccccCCEEEEEeecCCC
Q 019049          226 YDPVGGKL-T-KESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       226 ~d~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      +.++|... + .+-++.|+++-.+..+|....+
T Consensus        83 vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~E  115 (162)
T PF00670_consen   83 VTATGNKDVITGEHFRQMKDGAILANAGHFDVE  115 (162)
T ss_dssp             EE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTS
T ss_pred             EECCCCccccCHHHHHHhcCCeEEeccCcCcee
Confidence            99999843 3 6778899998888777654443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0017  Score=56.11  Aligned_cols=80  Identities=23%  Similarity=0.494  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c----CCc-EEE--eCCCCCchhhHHHHHHH-hcC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----GVD-HVV--DLSNESVIPSVKEFLKA-RKL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~----g~~-~v~--~~~~~~~~~~~~~~~~~-~~~  219 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+.+ +    +.. ..+  |..+.+   +.+.+.+. ...
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~---~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE---DLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH---HHHHHHHHHHhh
Confidence            57899999999999999999999999999999998876654432 1    321 122  333322   13333322 123


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            568999999874

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.41  E-value=0.0014  Score=58.50  Aligned_cols=81  Identities=28%  Similarity=0.338  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cC-Cc---EEEeCCCCCchhhHHHHHHHhcC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LG-VD---HVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g-~~---~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      .|++++|+||++++|...++.+...|++|+++++++++.+.+.+     .+ ..   ...|..+ +..+..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhcC
Confidence            47899999999999999998888899999999999987765432     11 11   1234432 232334555555544


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      ..+|++++++|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence            45779999887

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0015  Score=55.60  Aligned_cols=78  Identities=29%  Similarity=0.442  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEE-EeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+.+   .+......  ..++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~v~~~~~~--~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDA---AIRAALAA--AGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH---HHHHHHHH--hCCCCEEE
Confidence            56799999999999999999999999999999998877665543 443322 2333221   23333333  24689999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            99874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.39  E-value=0.0015  Score=56.35  Aligned_cols=80  Identities=28%  Similarity=0.348  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCc-EEE--eCCCCCc-hhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-HVV--DLSNESV-IPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~~~d  223 (347)
                      ++++++|.|++|++|..+++.+...|++|++++++.++.+.+.+. +.. ..+  |..+.+. .+..+++.+.  .+.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA--FGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH--hCCCC
Confidence            478999999999999999999999999999999988776666542 321 112  2222211 1112222222  24689


Q ss_pred             EEEeCCC
Q 019049          224 VLYDPVG  230 (347)
Q Consensus       224 ~v~d~~g  230 (347)
                      ++++++|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.39  E-value=0.0018  Score=55.34  Aligned_cols=79  Identities=20%  Similarity=0.334  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE---EEeCCCCCchhhHHHHHHHhc--C
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH---VVDLSNESVIPSVKEFLKARK--L  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~~~~~~~--~  219 (347)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+    +..+...   ..|..+.   +..++..+...  .
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~   80 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE---EDVEATFAQIAEDF   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH---HHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999987765443    2234332   1222221   12333333221  2


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +.+|.+|.++|
T Consensus        81 ~~id~vi~~ag   91 (253)
T PRK08217         81 GQLNGLINNAG   91 (253)
T ss_pred             CCCCEEEECCC
Confidence            46899999887

>PRK06128 oxidoreductase; Provisional

Probab=97.39  E-value=0.0034  Score=55.41  Aligned_cols=83  Identities=22%  Similarity=0.269  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hH----HHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KI----KFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||.|++|++|..++..+...|++|+++.++.+  +.    +.++..|....+..-+..-.+.++++.+..  ..+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999988776432  11    222334432222111111112233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       134 ~iD~lV~nAg~  144 (300)
T PRK06128        134 GLDILVNIAGK  144 (300)
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.38  E-value=0.0011  Score=60.37  Aligned_cols=108  Identities=19%  Similarity=0.183  Sum_probs=74.7

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      +....+..+....+++++++||-+|+  |.|..+..+++..|++|++++.+++..+.+++......+.....++    . 
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~----~-  223 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY----R-  223 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch----h-
Confidence            34445555667788899999999998  5778888889888999999999999998887643221111111122    1 


Q ss_pred             HHHHhcCCcccEEEeC-----CCc----cchHHHHhccccCCEEEEEe
Q 019049          213 FLKARKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                        ..  .+.||.|+..     +|.    ..++.+.+.|+|+|.+++..
T Consensus       224 --~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        224 --DL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             --hc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence              11  2468988643     343    34577889999999998754

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.38  E-value=0.00046  Score=59.70  Aligned_cols=102  Identities=19%  Similarity=0.321  Sum_probs=63.1

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHH
Q 019049          139 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       139 ~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      .-+.+++++++|++||-+|+  |.|..+..+++..|++|++++.++++.++++    +.|...-+...-.++.+      
T Consensus        52 ~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~------  123 (273)
T PF02353_consen   52 DLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD------  123 (273)
T ss_dssp             HHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG------
T ss_pred             HHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc------
Confidence            34457889999999999998  4888899999999999999999999888774    35522111111112211      


Q ss_pred             HHhcCCcccEEE-----eCCCcc----chHHHHhccccCCEEEEEe
Q 019049          215 KARKLKGVDVLY-----DPVGGK----LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       215 ~~~~~~~~d~v~-----d~~g~~----~~~~~~~~l~~~G~~v~~g  251 (347)
                       .  ...||.|+     +.+|..    .++.+.++|+|+|++++-.
T Consensus       124 -~--~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  124 -L--PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             ------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             -c--CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence             1  12788875     345532    3577889999999998643

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0015  Score=57.44  Aligned_cols=80  Identities=34%  Similarity=0.527  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|+|++|++|...++.+...|++|++++++.++.+.+.+    .+.. ..+  |..+.+   .+.+..+..  ..
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~~~  115 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD---AVDALVADVEKRI  115 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH---HHHHHHHHHHHHc
Confidence            35799999999999999999998899999999999876654432    2322 122  222222   233333321  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++++++|.
T Consensus       116 g~id~li~~AG~  127 (293)
T PRK05866        116 GGVDILINNAGR  127 (293)
T ss_pred             CCCCEEEECCCC
Confidence            478999999874

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0014  Score=55.08  Aligned_cols=78  Identities=26%  Similarity=0.360  Sum_probs=56.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.++..+.. ...|..+.+   .++.+.....+.++|+++.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~---~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPA---SVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHH---HHHHHHHHhcCCCCCEEEECC
Confidence            4799999999999999988888899999999988877777665543 222333332   244444434445799999987


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      |.
T Consensus        79 g~   80 (222)
T PRK06953         79 GV   80 (222)
T ss_pred             Cc
Confidence            74

>PRK08017 oxidoreductase; Provisional

Probab=97.37  E-value=0.0014  Score=56.21  Aligned_cols=80  Identities=21%  Similarity=0.350  Sum_probs=55.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCc-hhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESV-IPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~-~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.+++.++..+ .|..+.+. ....+.+.+.. +..+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALT-DNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhc-CCCCeEEEEC
Confidence            579999999999999999999999999999999988887777775433 23332211 11122222212 3468888888


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            773

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.35  E-value=0.0024  Score=55.17  Aligned_cols=79  Identities=28%  Similarity=0.413  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      ++++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ ++.. ..+  |..+.+   ..+...+..  ..+.+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA---DNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH---HHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999998887766643 3321 222  222221   122222211  12478


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++++++|
T Consensus        82 d~li~~ag   89 (263)
T PRK06200         82 DCFVGNAG   89 (263)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.0021  Score=55.19  Aligned_cols=82  Identities=21%  Similarity=0.214  Sum_probs=51.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhh-HHH----HHhcCC--cEEE--eCCCCCchhhHHHHH-H
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEK-IKF----LKSLGV--DHVV--DLSNESVIPSVKEFL-K  215 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~-~~~----~~~~g~--~~v~--~~~~~~~~~~~~~~~-~  215 (347)
                      +..+++|+|.||+|++|...++.+... |++|++++++.++ .+.    ++..+.  .+++  |..+.+-   ..+.. +
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~---~~~~~~~   81 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDS---HPKVIDA   81 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHH---HHHHHHH
Confidence            456789999999999999999877767 4899999998764 332    233332  1222  3332221   22222 2


Q ss_pred             HhcCCcccEEEeCCCc
Q 019049          216 ARKLKGVDVLYDPVGG  231 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~  231 (347)
                      ....+++|+++++.|.
T Consensus        82 ~~~~g~id~li~~ag~   97 (253)
T PRK07904         82 AFAGGDVDVAIVAFGL   97 (253)
T ss_pred             HHhcCCCCEEEEeeec
Confidence            2222579999987764

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0018  Score=56.00  Aligned_cols=80  Identities=26%  Similarity=0.405  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HV--VDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      +++++||.|++|++|..+++.+...|++|+++++++++.+.+.+    .+.. .+  .|..+.+.   .....+..  ..
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEA---TAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH---HHHHHHHHHHHc
Confidence            57899999999999999999999999999999998876554432    2322 12  23333221   32222221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        86 ~~id~vi~~Ag~   97 (263)
T PRK07814         86 GRLDIVVNNVGG   97 (263)
T ss_pred             CCCCEEEECCCC
Confidence            478999999873

>PRK06196 oxidoreductase; Provisional

Probab=97.34  E-value=0.0016  Score=58.00  Aligned_cols=79  Identities=27%  Similarity=0.389  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+. ++.....+  |..+.   +.++++....  ..+++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~---~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADL---ESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH---HHHHHHHHHHHhcCCCCC
Confidence            4689999999999999999999889999999999887665443 23212222  33322   2233333322  135799


Q ss_pred             EEEeCCC
Q 019049          224 VLYDPVG  230 (347)
Q Consensus       224 ~v~d~~g  230 (347)
                      ++++++|
T Consensus       102 ~li~nAg  108 (315)
T PRK06196        102 ILINNAG  108 (315)
T ss_pred             EEEECCC
Confidence            9999987

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0021  Score=55.18  Aligned_cols=80  Identities=23%  Similarity=0.357  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      ++++|+|+|++|++|..+++.+...|++|+++++++.+.+.. .+++.. ...|..+.+.   .+.+....  ..+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDA---VNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHH---HHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999988766544 344432 2223333221   33333321  1246899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ++.++|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998873

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0028  Score=54.82  Aligned_cols=80  Identities=29%  Similarity=0.503  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCc-EE--EeCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVD-HV--VDLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~-~v--~~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++++|.|+++++|...++.+...|++|+++++++++.+.+.+    .  +.. ..  .|..+.   +++.++....  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDE---ADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCH---HHHHHHHHHHHH
Confidence            47899999999999999999999999999999998876654421    1  111 11  233332   2233333221  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+.+|++++++|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence            13468999999983

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.29  E-value=0.0047  Score=48.71  Aligned_cols=87  Identities=17%  Similarity=0.204  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|+|.|+ |.+|.--++.+...|++|++++  ++..+.+++++... .  ....+        +...-.++|+|+-+
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~--~~~~~--------~~~dl~~a~lViaa   77 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-W--KQKTF--------SNDDIKDAHLIYAA   77 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-E--Eeccc--------ChhcCCCceEEEEC
Confidence            5789999999 9999998888888999999885  33344455554221 1  11222        11123578999999


Q ss_pred             CCccchHHHHhccccCCEEEE
Q 019049          229 VGGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       229 ~g~~~~~~~~~~l~~~G~~v~  249 (347)
                      ++++..+..+......+.++.
T Consensus        78 T~d~e~N~~i~~~a~~~~~vn   98 (157)
T PRK06719         78 TNQHAVNMMVKQAAHDFQWVN   98 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCcEE
Confidence            998766655444433333443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.29  E-value=0.0024  Score=51.64  Aligned_cols=87  Identities=23%  Similarity=0.302  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..+++.++.+|++|++.+++..........+...    .  +    .+++..     ..|+|+.+
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~----~--~----l~ell~-----~aDiv~~~   98 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY----V--S----LDELLA-----QADIVSLH   98 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE----S--S----HHHHHH-----H-SEEEE-
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccccee----e--e----hhhhcc-----hhhhhhhh
Confidence            5889999999 99999999999999999999999887655455555421    1  1    344443     46999988


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ...     ..+ ...++.|+++..+|.++
T Consensus        99 ~plt~~T~~li~~~~l~~mk~ga~lvN~a  127 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPGAVLVNVA  127 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred             hccccccceeeeeeeeeccccceEEEecc
Confidence            773     223 67889999999888764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0024  Score=54.85  Aligned_cols=82  Identities=22%  Similarity=0.377  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|+++++|...+..+...|++|+++++++++.+.+.    +.+... .+..+-.+ .+..+...+..  ..+.
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCC
Confidence            4679999999999999999999999999999999887665442    233222 22111111 11223333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.28  E-value=0.004  Score=54.03  Aligned_cols=92  Identities=20%  Similarity=0.239  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      ...++++++|.|+ |++|.+++..+...|++|+++.++.++.+.+. +++   ........         .    .....
T Consensus       113 ~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---------~----~~~~~  178 (270)
T TIGR00507       113 PLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---------E----LPLHR  178 (270)
T ss_pred             CCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---------h----hcccC
Confidence            3345789999999 99999999888888999999999887765443 332   21221111         0    01246


Q ss_pred             ccEEEeCCCccchH------HHHhccccCCEEEEEe
Q 019049          222 VDVLYDPVGGKLTK------ESLKLLNWGAQILVIG  251 (347)
Q Consensus       222 ~d~v~d~~g~~~~~------~~~~~l~~~G~~v~~g  251 (347)
                      +|++++|++.....      .....++++..++++.
T Consensus       179 ~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~  214 (270)
T TIGR00507       179 VDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMV  214 (270)
T ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            89999999863211      1234567776666653

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.27  E-value=0.0076  Score=49.66  Aligned_cols=99  Identities=20%  Similarity=0.429  Sum_probs=67.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcC-CcEEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLG-VDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ...++.++++|+-.|+ |. |.+++++++..+  .+|++++.+++..+.++    .+| .+.+.... .+.    .+...
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~----~~~l~  106 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEA----PEILF  106 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ech----hhhHh
Confidence            4567889999999999 55 899999888764  58999999998777664    355 23222111 121    11111


Q ss_pred             HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049          216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  249 (347)
                      .. ...+|.||...+.    ..+..+.+.|+++|+++.
T Consensus       107 ~~-~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        107 TI-NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             hc-CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            11 2479999986553    345778889999999985

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0029  Score=54.95  Aligned_cols=79  Identities=28%  Similarity=0.355  Sum_probs=53.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE--eCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +++++|+|++|++|..+++.+...|++|+++++++++.+.+. +++...++  |..+.+   +..+..+..  ..+++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPA---SFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHH---HHHHHHHHHHHHcCCCCE
Confidence            579999999999999999988889999999999888766543 44422222  333322   122222221  1247899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9999883

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0015  Score=56.34  Aligned_cols=82  Identities=32%  Similarity=0.485  Sum_probs=55.0

Q ss_pred             CCCCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCcEE--E--eCCCCCchhhHHHHHHH
Q 019049          147 LSSGQVLLVLGAAG-GVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVDHV--V--DLSNESVIPSVKEFLKA  216 (347)
Q Consensus       147 ~~~~~~VlI~g~~g-~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~~~~~~~~~~~~~  216 (347)
                      +..+++++|+|++| ++|.++++.+...|++|+++++++++.+...+     +|...+  +  |..+.   +..+.+.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~   90 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSE---AQVDALIDA   90 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCH---HHHHHHHHH
Confidence            34578999999986 89999999999999999999988876654422     343222  2  22222   223333332


Q ss_pred             h--cCCcccEEEeCCCc
Q 019049          217 R--KLKGVDVLYDPVGG  231 (347)
Q Consensus       217 ~--~~~~~d~v~d~~g~  231 (347)
                      .  ..+.+|++++++|.
T Consensus        91 ~~~~~g~id~li~~ag~  107 (262)
T PRK07831         91 AVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            2  12478999999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.002  Score=55.51  Aligned_cols=81  Identities=22%  Similarity=0.329  Sum_probs=54.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc--EE--EeCCCCCchhhHHHHHHHh--cCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD--HV--VDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~--~v--~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      -+++++||.|++|++|..++..+...|++|+++.++.++.+.+.+ ....  .+  .|..+..   .+....+..  ...
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~   85 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPA---QVERVFDTAVERFG   85 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH---HHHHHHHHHHHHhC
Confidence            477899999999999999999999999999999998776655543 2211  12  2333222   122222211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|.++|.
T Consensus        86 ~~d~vi~~ag~   96 (264)
T PRK12829         86 GLDVLVNNAGI   96 (264)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0025  Score=54.39  Aligned_cols=82  Identities=20%  Similarity=0.337  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      ++++++|.|++|++|...++.+...|++|++++++.++.+... +++... .+..+-.+. +....+.+..  ..+++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDV-AAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999999999999999999999877655443 455332 221111111 1122222211  1246899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        84 vi~~ag~   90 (249)
T PRK06500         84 VFINAGV   90 (249)
T ss_pred             EEECCCC
Confidence            9998873

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0037  Score=53.98  Aligned_cols=82  Identities=28%  Similarity=0.398  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c--C-CcEEEeCCCCCchhhHHHHHHHh-cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L--G-VDHVVDLSNESVIPSVKEFLKAR-KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~--g-~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d  223 (347)
                      +++++||+|++|++|...+..+...|++|+++++++++.+.+.. +  + ....+..+-.+. ++.+.+.+.. ..+.+|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSE-AGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHhcCCCC
Confidence            46799999999999999999998999999999998876655532 2  2 112222111111 1223332221 135789


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      +++.++|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06720 hypothetical protein; Provisional

Probab=97.24  E-value=0.0057  Score=48.94  Aligned_cols=81  Identities=21%  Similarity=0.324  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHH--hcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKA--RKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~~~  221 (347)
                      .++.++|.|+++++|...+..+...|++|++++++.++.+..    .+.+... .+..+-.+. ++.+++.+.  ...++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQ-GDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            578999999999999999998888999999999887654332    2234322 222222221 222332221  12347


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++++++|
T Consensus        94 iDilVnnAG  102 (169)
T PRK06720         94 IDMLFQNAG  102 (169)
T ss_pred             CCEEEECCC
Confidence            899999888

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0043  Score=53.65  Aligned_cols=79  Identities=22%  Similarity=0.356  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      ++++++|.|++|++|..+++.+...|++|+++++++++.+..    .+.+.. ..+  |..+.   ++++...+..  ..
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~i~~~~~~~~~~~   84 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY---AAVEAAFAQIADEF   84 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH---HHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999987765433    222322 222  33222   2233333322  12


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +++|++|++.|
T Consensus        85 ~~iD~vi~~ag   95 (264)
T PRK07576         85 GPIDVLVSGAA   95 (264)
T ss_pred             CCCCEEEECCC
Confidence            46899998876

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0026  Score=54.61  Aligned_cols=80  Identities=25%  Similarity=0.337  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HV--VDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||.|+++++|..+++.+...|++|++++++.++.+.+.    ..+.. ..  .|..+.+   ..+++.+..  ..
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ---QVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH---HHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999887665443    22322 11  2332221   133332221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++++.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            478999998873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.23  E-value=0.0034  Score=53.62  Aligned_cols=82  Identities=23%  Similarity=0.352  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      .+++++|.|++|++|..++..+...|++|++++++...  .+.+++.+.. ..+..+-.+ .+.+....+..  ..+++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999986531  2333444422 222211111 12233333221  124689


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0036  Score=55.67  Aligned_cols=80  Identities=24%  Similarity=0.297  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEE--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVV--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++++|+|+++++|..++..+...|++|++++++.++.+.+. ++     +.. .++  |..+.   ++++++.+..  
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~---~sv~~~~~~~~~   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSL---ASVAALGEQLRA   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCH---HHHHHHHHHHHH
Confidence            4689999999999999999999899999999999887655442 11     111 122  33322   2233333321  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+.+|++++++|.
T Consensus        90 ~~~~iD~li~nAG~  103 (313)
T PRK05854         90 EGRPIHLLINNAGV  103 (313)
T ss_pred             hCCCccEEEECCcc
Confidence            23578999998873

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0038  Score=53.65  Aligned_cols=82  Identities=30%  Similarity=0.466  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cC-CcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LG-VDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|++|++|..++..+...|++|++++++.++.+.+..    .+ ...++..+-.+. +.+.......  ..+.
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999887655432    12 122222221111 1122222211  1347


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>PRK06194 hypothetical protein; Provisional

Probab=97.22  E-value=0.004  Score=54.53  Aligned_cols=82  Identities=22%  Similarity=0.382  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+... +   .+... ++..+-.+ .++++++....  ..++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFGA   83 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            3679999999999999999999999999999998876554432 2   23322 12222111 12233333221  1246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.22  E-value=0.0026  Score=50.60  Aligned_cols=81  Identities=23%  Similarity=0.307  Sum_probs=51.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhc--CCc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG--AEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARK--LKG  221 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~--~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~--~~~  221 (347)
                      ++++|+|+++++|...++.+...|+ +|+.+.++  .++.+.+    ++.+....+-.-+....+..+++.+...  ...
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999999988888877 77888887  3433333    3445322222122222233444444332  457


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999884

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0035  Score=53.98  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=53.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cC-C-cEE--EeCCCCCchhhHHHHHHHh-c--CCcc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG-V-DHV--VDLSNESVIPSVKEFLKAR-K--LKGV  222 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g-~-~~v--~~~~~~~~~~~~~~~~~~~-~--~~~~  222 (347)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+.. .+ . .++  .|..+.+.   +.+..... .  .+.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAA---WDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHH---HHHHHHHHHHHcCCCC
Confidence            579999999999999999998899999999998887666543 32 1 122  23333221   33332221 1  3578


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+++.++|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999999884

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.21  E-value=0.017  Score=47.44  Aligned_cols=78  Identities=27%  Similarity=0.351  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c----CCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----GVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .+.+++|.|++|++|..++..+...|++|+++.++.++.+.+.+ +    +.. +......+    .....+..  .++|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~--~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEG-VGAVETSD----DAARAAAI--KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeCCC----HHHHHHHH--hcCC
Confidence            56799999999999999998888889999999999887665532 2    222 11111111    22222222  4689


Q ss_pred             EEEeCCCccc
Q 019049          224 VLYDPVGGKL  233 (347)
Q Consensus       224 ~v~d~~g~~~  233 (347)
                      +||.+++...
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999988654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0039  Score=53.26  Aligned_cols=80  Identities=34%  Similarity=0.429  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      ++++++|+|++|++|..++..+...|++|+++++++++.+...    ..+.. .++  |..+.   +.++++.+..  ..
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~   82 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADP---ASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998877655442    22322 222  32222   2233333322  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|+++.++|.
T Consensus        83 ~~id~vi~~ag~   94 (250)
T PRK12939         83 GGLDGLVNNAGI   94 (250)
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.007  Score=52.55  Aligned_cols=78  Identities=26%  Similarity=0.323  Sum_probs=51.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE----EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH----VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~----v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ++++|+|++|++|..+++.+...|++|+++.+++++.+..    +..+...    ..|..+.+.   .+......  ..+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA---VAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHH---HHHHHHHHHHhcC
Confidence            3799999999999999999999999999999887765433    2234321    234333222   22222221  134


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        78 ~id~lv~~ag~   88 (272)
T PRK07832         78 SMDVVMNIAGI   88 (272)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.18  E-value=0.0078  Score=51.84  Aligned_cols=79  Identities=14%  Similarity=0.304  Sum_probs=49.9

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh---hhHHHHH-hc-CCc-EE--EeCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFLK-SL-GVD-HV--VDLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~---~~~~~~~-~~-g~~-~v--~~~~~~~~~~~~~~~~~~~-  217 (347)
                      .+++++|.|++  +++|.++++.+...|++|+++.++.   ++.+.+. ++ +.. ..  .|..+.   ++++++.+.. 
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~   82 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD---EEITACFETIK   82 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH---HHHHHHHHHHH
Confidence            47899999997  7999999999989999999887542   3333332 33 211 11  233322   2233333322 


Q ss_pred             -cCCcccEEEeCCC
Q 019049          218 -KLKGVDVLYDPVG  230 (347)
Q Consensus       218 -~~~~~d~v~d~~g  230 (347)
                       ..+.+|++++++|
T Consensus        83 ~~~g~ld~lv~nag   96 (257)
T PRK08594         83 EEVGVIHGVAHCIA   96 (257)
T ss_pred             HhCCCccEEEECcc
Confidence             1257999999876

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0032  Score=53.11  Aligned_cols=81  Identities=20%  Similarity=0.177  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh---cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR---KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~---~~~  220 (347)
                      .+++++|.|+++++|.+.+..+...|++|+++.++.++.+.+    ++.+.. ..+..+..+ .++.+++....   -+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999988876544    233432 222222222 12233333322   122


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            7999999986

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.003  Score=54.16  Aligned_cols=82  Identities=23%  Similarity=0.287  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +++++||.|++|++|..+++.+...|++|++++++++..+...+.....  .+..+-.+. ++.+......  ...++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            4779999999999999999999889999999999876544444432111  222221111 1233332221  1246899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ++.++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.18  E-value=0.0017  Score=55.51  Aligned_cols=82  Identities=22%  Similarity=0.310  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC--Cc-EEEeCCCCCchhhHHHHHHH--hcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG--VD-HVVDLSNESVIPSVKEFLKA--RKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g--~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~  222 (347)
                      .++++||.|++|++|..+++.+...|++|+++++++++.+.+. .+.  .. ..+..+-.+ .+.++...+.  .....+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999999889999999999987765543 222  11 122111111 1123333221  123478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|.++|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0048  Score=52.98  Aligned_cols=80  Identities=24%  Similarity=0.375  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|.|++|++|..++..+...|++|+++++++++.+.+.+    .+..   ...|..+.   +..+...+..  ..
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE---DQCANLVALALERF   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH---HHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999998876544432    2322   12222222   1233222221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.++|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            468999998873

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0036  Score=54.58  Aligned_cols=80  Identities=19%  Similarity=0.293  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCc-EE--EeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-HV--VDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~-~v--~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|.|++|++|..+++.+...|++|+++++++++.+.+.+. +.. ..  .|..+.+   .+....+..  ..+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~---~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFD---AIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH---HHHHHHHHHHHHhCCC
Confidence            457899999999999999999988999999999998877666543 211 11  2333222   122222211  12468


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        80 d~vv~~ag~   88 (277)
T PRK06180         80 DVLVNNAGY   88 (277)
T ss_pred             CEEEECCCc
Confidence            999999885

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.17  E-value=0.0037  Score=55.68  Aligned_cols=94  Identities=24%  Similarity=0.331  Sum_probs=62.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|+|+||+|-+|..+++.+...|.+|.+++++.++.......|...+. |..+.      ..+....  .++|+||.+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~------~~l~~al--~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP------ETLPPSF--KGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH------HHHHHHH--CCCCEEEECCC
Confidence            699999999999999999988999999999987765555555654332 22221      2223333  36899999876


Q ss_pred             ccc-------------hHHHHhccccCC--EEEEEeec
Q 019049          231 GKL-------------TKESLKLLNWGA--QILVIGFA  253 (347)
Q Consensus       231 ~~~-------------~~~~~~~l~~~G--~~v~~g~~  253 (347)
                      ...             ...+++.++..|  +++.++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            311             123445555544  78877653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.17  E-value=0.0036  Score=55.85  Aligned_cols=79  Identities=25%  Similarity=0.334  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---Cc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VD-HV--VDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~-~v--~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+. ++.   .. ..  .|..+.   +++....+..  ..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDL---DSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCH---HHHHHHHHHHHHhC
Confidence            4779999999999999999999889999999999887765443 332   11 11  232222   2233333221  23


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      ..+|++++++|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            46899999987

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.17  E-value=0.0046  Score=53.04  Aligned_cols=80  Identities=20%  Similarity=0.338  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCcE-E--EeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDH-V--VDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~~-v--~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|+++++|.++++.+...|++|+++.++..+  .+..++.+... .  .|..+.   +..+++.+..  ..++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQ---KDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCH---HHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999988775432  22334445322 1  233332   2233333321  1246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++++.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            8999999873

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.17  E-value=0.0047  Score=53.01  Aligned_cols=80  Identities=25%  Similarity=0.412  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    +..|... .+  |..+..   ..+.+....  ..
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD---AVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH---HHHHHHHHHHHhc
Confidence            478999999999999999999988999999999987765433    2233221 22  333222   233333221  23


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++|.++|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            468999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.13  E-value=0.001  Score=62.38  Aligned_cols=95  Identities=18%  Similarity=0.153  Sum_probs=64.6

Q ss_pred             HhcCCCCCCEEE----EecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLL----VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~Vl----I~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .+.++++|+++|    |+|++|++|.+++|+++..|++|+++.....+....+..+.+ .++|.+....   ...+....
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~l~~~~  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITD---PADLKALY  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCC---HHHHHHHH
Confidence            467778999998    999889999999999999999999988766544333333433 4566555444   22221111


Q ss_pred             cCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          218 KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       218 ~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                                    ..+...++.|.++|+++.++...
T Consensus       104 --------------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 --------------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             --------------HHHHHHHHhccCCCEEEEEcccc
Confidence                          23345667777888888876543

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0058  Score=52.61  Aligned_cols=80  Identities=29%  Similarity=0.428  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCc-EEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVD-HVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      .+++++|.|+++++|...++.+...|++|++++++.++.+.+.+     .+.. ..+..+-.+ .++.....+..  +.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CCC
Confidence            47899999999999999999998999999999998876654321     1321 222211111 22244444432  478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+++++.|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK09242 tropinone reductase; Provisional

Probab=97.12  E-value=0.0059  Score=52.50  Aligned_cols=80  Identities=26%  Similarity=0.412  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCcE-EE--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVDH-VV--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~~-v~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+    .  +... .+  |..+.   ++.+...+..  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD---EDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH---HHHHHHHHHHHH
Confidence            47899999999999999999999999999999998876654432    1  2211 12  22222   2233333221  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+++|+++.+.|.
T Consensus        85 ~~g~id~li~~ag~   98 (257)
T PRK09242         85 HWDGLHILVNNAGG   98 (257)
T ss_pred             HcCCCCEEEECCCC
Confidence            13479999999984

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.006  Score=53.11  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+.    ..|... .+  |..+.   +++..+.+..  ..
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHR---EEVTHLADEAFRLL   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCH---HHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998877655432    234322 12  22221   2233332221  12


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +.+|++++++|
T Consensus        82 g~id~li~nAg   92 (275)
T PRK05876         82 GHVDVVFSNAG   92 (275)
T ss_pred             CCCCEEEECCC
Confidence            46899999987

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0046  Score=53.35  Aligned_cols=82  Identities=24%  Similarity=0.413  Sum_probs=52.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      ++++||.|++|++|..+++.+...|++|+++++++++.+.+    +..+....+...+..-.+......+..  ...++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35899999999999999999999999999999987655433    223432211111111111233333221  124689


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      +++.++|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.11  E-value=0.0064  Score=50.27  Aligned_cols=91  Identities=16%  Similarity=0.240  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|||+|+ |.+|..-++.+...|++|++++.... ....+.+.|.-..+   ...+.   ...     -.++++||-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~---~~~~~---~~d-----l~~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWL---ARCFD---ADI-----LEGAFLVIA   75 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEE---eCCCC---HHH-----hCCcEEEEE
Confidence            4779999999 99999999999999999999987543 33333344421111   11221   111     147899999


Q ss_pred             CCCcc-chHHHHhccccCCEEEEEe
Q 019049          228 PVGGK-LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g  251 (347)
                      +++.+ ....+....+..|..+.+.
T Consensus        76 at~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        76 ATDDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             CCCCHHHHHHHHHHHHHcCCEEEEC
Confidence            99986 4456667777778777653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.11  E-value=0.0046  Score=57.97  Aligned_cols=79  Identities=24%  Similarity=0.389  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHhc--CCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKARK--LKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~~--~~~~  222 (347)
                      ++++++|+|++|++|..+++.+...|++|++++++.  ++.+.+ .+++.. ...|..+.+.   .+.+.....  .+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDA---PARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHHHHHhCCCC
Confidence            478999999999999999999999999999988743  223222 345533 2234443322   333333221  2478


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++|+++|
T Consensus       286 d~vi~~AG  293 (450)
T PRK08261        286 DIVVHNAG  293 (450)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0058  Score=54.10  Aligned_cols=81  Identities=28%  Similarity=0.394  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.++.+.+. ++     +.. ..+..+-.+. +.++...+..  ..
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL-ASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHhhC
Confidence            5689999999999999999988889999999999877654331 11     211 1222221111 2233333322  13


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +++|++++++|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            46899999987

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.11  E-value=0.0073  Score=55.81  Aligned_cols=139  Identities=19%  Similarity=0.251  Sum_probs=90.5

Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEE-E----------------EecCCCcceeeEeeeCCCeee---C-CCCCCHHHHc
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTV-C----------------GFAALGSFAQFIVADQSELFP---V-PKGCDLLAAA  128 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V-~----------------~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa  128 (347)
                      .-|.++++-+.+|+++....-.|+.- +                |...++.|++++.+.. .+..   + +..+|...+|
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A  167 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA  167 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence            46889999999999998776666643 2                2223367777777665 2222   3 3334333332


Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHH-HHHhcCCcEEEeCCCCCc
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIK-FLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~  206 (347)
                      .-        .+ .+..+.-++++|+|+|+ |.+|..+++.++..| .+|+++.++.++.+ .++++|.. .++.     
T Consensus       168 v~--------la-~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~-----  231 (417)
T TIGR01035       168 VE--------LA-ERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF-----  231 (417)
T ss_pred             HH--------HH-HHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----
Confidence            10        11 12333357889999999 999999999999999 58999999988755 55667753 2221     


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                          ....+..  .++|+||+|++.
T Consensus       232 ----~~l~~~l--~~aDvVi~aT~s  250 (417)
T TIGR01035       232 ----EDLEEYL--AEADIVISSTGA  250 (417)
T ss_pred             ----HHHHHHH--hhCCEEEECCCC
Confidence                1111211  368999999986

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0051  Score=52.73  Aligned_cols=78  Identities=23%  Similarity=0.336  Sum_probs=52.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC-cEEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~-~~v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +++++|.|+++++|...++.+...|++|++++++.++.+.+.+    .+. ...+  |..+.+   ..++.....  ..+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPE---DVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH---HHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999998876654432    221 2223  222221   233333221  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus        78 ~id~lI~~ag   87 (252)
T PRK07677         78 RIDALINNAA   87 (252)
T ss_pred             CccEEEECCC
Confidence            6899999887

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0052  Score=54.37  Aligned_cols=35  Identities=34%  Similarity=0.444  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .+++++|.|+++++|.++++.+...|++|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            47899999999999999999999999999999886

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.10  E-value=0.0031  Score=54.58  Aligned_cols=81  Identities=28%  Similarity=0.482  Sum_probs=55.9

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc------EEEeCCCCCchhhHHHHHHHh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD------HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~------~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      -.|+.++|+|++.++|.+.+..+...|++|+++.++.++.+....    .+..      .+.|..+.+   ..++....+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~---~~~~l~~~~   82 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV---DVEKLVEFA   82 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH---HHHHHHHHH
Confidence            368899999999999999999999999999999999987655532    2221      122222222   233333222


Q ss_pred             --c-CCcccEEEeCCCc
Q 019049          218 --K-LKGVDVLYDPVGG  231 (347)
Q Consensus       218 --~-~~~~d~v~d~~g~  231 (347)
                        . .+++|+.++..|.
T Consensus        83 ~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence              1 3579999998884

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.005  Score=52.84  Aligned_cols=80  Identities=18%  Similarity=0.305  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HH----HHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IK----FLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~----~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|+++++|..+++.+...|++|++++++.++ .+    .++..+.. ..+  |..+.+   .+.......  .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~---~i~~~~~~~~~~   83 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA---DLRAAVARTEAE   83 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH---HHHHHHHHHHHH
Confidence            47799999999999999999999999999999876532 22    22233422 122  222221   133322221  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|+++++.|.
T Consensus        84 ~g~id~li~~ag~   96 (254)
T PRK06114         84 LGALTLAVNAAGI   96 (254)
T ss_pred             cCCCCEEEECCCC
Confidence            2568999999884

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.09  E-value=0.0085  Score=47.72  Aligned_cols=97  Identities=19%  Similarity=0.195  Sum_probs=63.9

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG-VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~-~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      ...|+....+...+.....--.+++|+|.|+ |. +|..++..++..|++|+++.++.++                    
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~--------------------   80 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKN--------------------   80 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchh--------------------
Confidence            4455655555555544433347899999999 65 5999999999999999888875321                    


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                         ..+.+     ..+|+||.+++.+.+ --.+.++++-.++.++.+.
T Consensus        81 ---l~~~l-----~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          81 ---LKEHT-----KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             ---HHHHH-----hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence               11111     367999999998543 2223466666666666443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08643 acetoin reductase; Validated

Probab=97.09  E-value=0.0052  Score=52.78  Aligned_cols=79  Identities=23%  Similarity=0.262  Sum_probs=52.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcE-EE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-VV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +++++|.|++|++|..+++.+...|++|++++++.++.+.+..    .+... .+  |..+.+   .+.+.....  ..+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD---QVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH---HHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998876544422    23221 12  222222   123333221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|+++.++|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0055  Score=52.14  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=51.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEE--EeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHV--VDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v--~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++++|.|++|++|...+..+...|++|+++++++++.+.+...+. ...  .|..+.   +.+++..+.... ..|.++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~-~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDH---PGTKAALSQLPF-IPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH---HHHHHHHHhccc-CCCEEEE
Confidence            579999999999999998888899999999999887776654331 122  233332   224444444432 4577666


Q ss_pred             CCC
Q 019049          228 PVG  230 (347)
Q Consensus       228 ~~g  230 (347)
                      ++|
T Consensus        78 ~ag   80 (240)
T PRK06101         78 NAG   80 (240)
T ss_pred             cCc
Confidence            665

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0052  Score=52.64  Aligned_cols=80  Identities=26%  Similarity=0.368  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|.|++|++|..+++.+...|++|+++++++++.+.+    ++.+.. ..+  |..+.   +.+..+.+..  ..
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~i~~~~~~~~~~~   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRD---AEVKALVEQTIAAY   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH---HHHHHHHHHHHHHh
Confidence            468999999999999999998888999999999988765433    233422 222  22222   1122222211  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.+.|.
T Consensus        83 g~id~li~~ag~   94 (253)
T PRK06172         83 GRLDYAFNNAGI   94 (253)
T ss_pred             CCCCEEEECCCC
Confidence            468999998874

>PRK09186 flagellin modification protein A; Provisional

Probab=97.07  E-value=0.0047  Score=52.99  Aligned_cols=79  Identities=27%  Similarity=0.350  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCc---E-EEeCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD---H-VVDLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~---~-v~~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++++|.|++|++|...+..+...|++|+++++++++.+.+. ++    +..   . ..|..+.+.   +.++.+..  
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQES---LEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHH---HHHHHHHHHH
Confidence            5789999999999999999999999999999999887665442 22    211   1 223333222   33332221  


Q ss_pred             cCCcccEEEeCCC
Q 019049          218 KLKGVDVLYDPVG  230 (347)
Q Consensus       218 ~~~~~d~v~d~~g  230 (347)
                      ..+++|+++++++
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence            1246899999885

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.07  E-value=0.0056  Score=52.68  Aligned_cols=81  Identities=30%  Similarity=0.455  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCc-hhhHHHHHHHhcCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESV-IPSVKEFLKARKLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~  220 (347)
                      .++++||.|++|++|..+++.+...|++|++++++.++.+...    ..+.. ..+  |..+.+. ....+.+.+.  ..
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~--~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER--FG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH--hC
Confidence            5789999999999999999999889999999999887665443    22322 122  3332211 1111222222  24


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|.++.++|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0058  Score=52.45  Aligned_cols=74  Identities=27%  Similarity=0.366  Sum_probs=51.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EE--EeCCCCCchhhHHHHHHHhcCCcc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HV--VDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ++++||+|++|++|..+++.+...|++|+++++++.+.+.+.+    .+.. .+  .|..+.      ..+.... ..++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~-~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA------IDRAQAA-EWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH------HHHHHHh-cCCC
Confidence            4689999999999999999999999999999998776554432    2322 11  233222      2222222 2479


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++|+++|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0055  Score=52.77  Aligned_cols=80  Identities=29%  Similarity=0.355  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEE--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVV--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++++|.|+++++|..+++.+...|++|+++++++++.+.+. ++     +.. ..+  |..+..   ......+..  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~   82 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA---SVAAAVAAAEE   82 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH---HHHHHHHHHHH
Confidence            4689999999999999999999999999999999887665442 22     211 122  222221   122222211  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+.+|++++++|.
T Consensus        83 ~~g~id~li~~ag~   96 (260)
T PRK07063         83 AFGPLDVLVNNAGI   96 (260)
T ss_pred             HhCCCcEEEECCCc
Confidence            12478999999883

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.06  E-value=0.0056  Score=53.18  Aligned_cols=79  Identities=27%  Similarity=0.352  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhH---HHH-HhcCCcEEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKI---KFL-KSLGVDHVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~---~~~-~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      +++++||.|+++  ++|.++++.+...|++|+++.++.+..   +.+ ++.|....+  |..+.   ++++.+.+..  .
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~---~~v~~~~~~~~~~   82 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDI---ASVDAVFEALEKK   82 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCH---HHHHHHHHHHHHH
Confidence            578999999976  999999999999999999988765322   222 334533222  32222   2233333322  1


Q ss_pred             CCcccEEEeCCC
Q 019049          219 LKGVDVLYDPVG  230 (347)
Q Consensus       219 ~~~~d~v~d~~g  230 (347)
                      .+.+|++++++|
T Consensus        83 ~g~iD~lVnnAG   94 (271)
T PRK06505         83 WGKLDFVVHAIG   94 (271)
T ss_pred             hCCCCEEEECCc
Confidence            257999999987

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.017  Score=49.13  Aligned_cols=82  Identities=22%  Similarity=0.289  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHH----HHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ++++++|+|++|++|...++.+...|++++++.++.. +.+    .++..+.. ..+..+-.+ .+++++..+..  ..+
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999888776433 222    22233322 222221111 12233333221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|.++|.
T Consensus        83 ~id~vi~~ag~   93 (245)
T PRK12937         83 RIDVLVNNAGV   93 (245)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0019  Score=55.99  Aligned_cols=78  Identities=23%  Similarity=0.388  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.++.+..  .+.. ...|..+.+-   ++...+..  ..+.+|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~---~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDAS---VQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHH---HHHHHHHHHHhCCCCCEE
Confidence            457899999999999999999988999999999987654322  1222 1223333221   22322221  23468999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            999984

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0051  Score=52.88  Aligned_cols=82  Identities=22%  Similarity=0.281  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+..++   .+.. ..+..+-.+ .+..+......  ..+++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCCC
Confidence            46799999999999999999998999999999988776543333   3322 222222111 11222222211  12478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999983

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0062  Score=52.16  Aligned_cols=81  Identities=19%  Similarity=0.318  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|++|++|...++.+...|++|+.++++.++.+.+.    +.+.. ..+..+-.+. +..+...+..  ..+.
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHGR   85 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999999999877654442    22322 2222221121 1122222221  1236


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++++++|
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK08589 short chain dehydrogenase; Validated

Probab=97.05  E-value=0.0063  Score=52.86  Aligned_cols=79  Identities=32%  Similarity=0.437  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HH---hcCCc-E--EEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LK---SLGVD-H--VVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||.|+++++|...++.+...|++|++++++ ++.+. ++   +.+.. .  ..|..+...   ++...+..  ..
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~   80 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQ---VKDFASEIKEQF   80 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHH---HHHHHHHHHHHc
Confidence            57899999999999999999998899999999988 44332 22   22321 1  223333221   33333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++++++|.
T Consensus        81 g~id~li~~Ag~   92 (272)
T PRK08589         81 GRVDVLFNNAGV   92 (272)
T ss_pred             CCcCEEEECCCC
Confidence            468999998873

>PRK04148 hypothetical protein; Provisional

Probab=97.05  E-value=0.0087  Score=45.36  Aligned_cols=99  Identities=23%  Similarity=0.258  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEe-CCCCCchhhHHHHHHHhcCCcccE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD-LSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .-.++.+++++|. | .|...+..+...|.+|++++.++...+.+++.+.+.+.+ .-+.+.     ++     -.++|+
T Consensus        13 ~~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-----~~-----y~~a~l   80 (134)
T PRK04148         13 EKGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-----EI-----YKNAKL   80 (134)
T ss_pred             ccccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-----HH-----HhcCCE
Confidence            3345678999999 7 887677777788999999999999999998888654443 112221     11     247888


Q ss_pred             EEeCCCccch-HHHHhccccCCEEEEEeecCCC
Q 019049          225 LYDPVGGKLT-KESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       225 v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      ++.+-..+-+ ..++++-+.-|.=+.+-..+++
T Consensus        81 iysirpp~el~~~~~~la~~~~~~~~i~~l~~e  113 (134)
T PRK04148         81 IYSIRPPRDLQPFILELAKKINVPLIIKPLSGE  113 (134)
T ss_pred             EEEeCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence            8888776444 4455555555544444333333

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0057  Score=52.27  Aligned_cols=74  Identities=19%  Similarity=0.188  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEE--EeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHV--VDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.. +.+... .+....  .|..+      .+.+.+..  +++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~------~~~~~~~~--~~iDil   83 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGK------EESLDKQL--ASLDVL   83 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCC------HHHHHHhc--CCCCEE
Confidence            4689999999999999999999999999999998762 222111 111122  23222      12222222  469999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        84 VnnAG~   89 (245)
T PRK12367         84 ILNHGI   89 (245)
T ss_pred             EECCcc
Confidence            999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.015  Score=49.80  Aligned_cols=39  Identities=31%  Similarity=0.330  Sum_probs=32.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKI  187 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~  187 (347)
                      .+++++|+|+++++|..+++.+...|++|+++. ++.++.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~   42 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA   42 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHH
Confidence            468999999999999999999999999998865 444443

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0077  Score=51.45  Aligned_cols=82  Identities=26%  Similarity=0.307  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.    ..+.. ..+..+-.+. ++++......  ..++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP-DSAKAMADATVSAFGG   83 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHhCC
Confidence            4678999999999999999999889999999999876544332    22221 1222211111 1122222211  1236


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|.++|.
T Consensus        84 id~vi~~ag~   93 (250)
T PRK07774         84 IDYLVNNAAI   93 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>PRK05717 oxidoreductase; Validated

Probab=97.04  E-value=0.0065  Score=52.18  Aligned_cols=80  Identities=24%  Similarity=0.299  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|++++|+|++|++|..++..+...|++|++++++.++.+.. +.++.. ..+  |..+.   ++..+..+..  ..+.+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADE---AQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH---HHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999998877655443 344422 122  22222   1122222211  12468


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+++.++|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.04  E-value=0.014  Score=48.24  Aligned_cols=90  Identities=12%  Similarity=0.074  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|||.|+ |.+|...+..+...|++|+++++... +...+...+.. .+  ....+.   .     ..-.++|+||-
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i-~~--~~~~~~---~-----~~l~~adlVia   76 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKI-RW--KQKEFE---P-----SDIVDAFLVIA   76 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCE-EE--EecCCC---h-----hhcCCceEEEE
Confidence            5789999999 99999999888889999999976532 22222222211 11  111120   0     01257899999


Q ss_pred             CCCccchHHHHhccccCCEEEEE
Q 019049          228 PVGGKLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~  250 (347)
                      +++++..+..+......+.++.+
T Consensus        77 aT~d~elN~~i~~~a~~~~lvn~   99 (202)
T PRK06718         77 ATNDPRVNEQVKEDLPENALFNV   99 (202)
T ss_pred             cCCCHHHHHHHHHHHHhCCcEEE
Confidence            99987665544333344555554

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.04  E-value=0.006  Score=52.16  Aligned_cols=80  Identities=26%  Similarity=0.377  Sum_probs=52.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEEeC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLYDP  228 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d~  228 (347)
                      +++|.|++|++|...+..+...|++|+++++++++.+.+.. ++....+..-+..-.++++...+..  ..+++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999887665543 4432211111111112233333221  12468999998


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      +|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            863

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.04  E-value=0.0049  Score=53.05  Aligned_cols=79  Identities=27%  Similarity=0.398  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH---hcCCcE---EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK---SLGVDH---VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|++|++|..+++.+...|++|+++++++...+...   ..+...   ..|..+.+   ......+..  ..+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYA---GAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH---HHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999998754323222   234321   22333321   122222221  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      ++|++++++|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            7999999987

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0066  Score=51.41  Aligned_cols=82  Identities=22%  Similarity=0.275  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ++.   ..+.+..+-.+. +......+..  ...++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988888999999999887665442 332   122222221111 1122222211  12478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|++.|.
T Consensus        84 d~vi~~ag~   92 (237)
T PRK07326         84 DVLIANAGV   92 (237)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.03  E-value=0.0074  Score=51.80  Aligned_cols=80  Identities=26%  Similarity=0.418  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|.|++|++|..++..+...|++|+++.++.++.+.+    ++.+.. ..+  |..+.   +......+..  ..
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE---EAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH---HHHHHHHHHHHHhc
Confidence            578999999999999999998888999999999987755443    233421 122  22222   1223332221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|.++.++|.
T Consensus        87 ~~id~vi~~ag~   98 (256)
T PRK06124         87 GRLDILVNNVGA   98 (256)
T ss_pred             CCCCEEEECCCC
Confidence            468999999884

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.005  Score=52.07  Aligned_cols=80  Identities=21%  Similarity=0.363  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH----HHhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF----LKSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~----~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++++||+|++|++|..+++.+...|++|++++++.++...    .+..+...+ .|..+.   ++++...+..  ..++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP---QAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH---HHHHHHHHHHHHHhCC
Confidence            47899999999999999999998889999999997765332    222332221 222221   1233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++.++|.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            8999998873

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.02  E-value=0.0089  Score=49.48  Aligned_cols=103  Identities=19%  Similarity=0.291  Sum_probs=72.9

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcCCcEEEeCCC-CCchhhHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVDHVVDLSN-ESVIPSVKEFL  214 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~-~~~~~~~~~~~  214 (347)
                      ..++++.+.++||=+|.  .+|..++.+|..+.  .+++.++.++++.+.++    +.|.+..+.... .+.   .+.+.
T Consensus        52 ~~L~~~~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gda---l~~l~  126 (219)
T COG4122          52 RLLARLSGPKRILEIGT--AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDA---LDVLS  126 (219)
T ss_pred             HHHHHhcCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcH---HHHHH
Confidence            34677778899999985  77888888888876  48999999999887775    466555332222 233   33333


Q ss_pred             HHhcCCcccEEE-eCCCc---cchHHHHhccccCCEEEEE
Q 019049          215 KARKLKGVDVLY-DPVGG---KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       215 ~~~~~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~  250 (347)
                      + ...+.||.|| |+.-.   ..++.++++|++||.++.=
T Consensus       127 ~-~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         127 R-LLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             h-ccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            3 3356899997 44433   4578899999999999863

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.01  E-value=0.0073  Score=51.78  Aligned_cols=80  Identities=24%  Similarity=0.371  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+.. ..+  |..+.   +..+......  ..
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK---QEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH---HHHHHHHHHHHHhc
Confidence            4779999999999999999999999999999999877654432    22322 122  22222   1233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.+.|.
T Consensus        85 ~~id~vi~~ag~   96 (254)
T PRK08085         85 GPIDVLINNAGI   96 (254)
T ss_pred             CCCCEEEECCCc
Confidence            468999999873

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.01  E-value=0.0067  Score=52.82  Aligned_cols=81  Identities=21%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|++|++|...++.+...|++|++++++.++.+.+.    ..+.. ..+..+-.+. +.+....+..  ..+.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999876554332    22322 1222221111 1133222221  1247


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++++++|
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.01  E-value=0.007  Score=52.12  Aligned_cols=81  Identities=15%  Similarity=0.182  Sum_probs=51.4

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhH---HHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKI---KFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~---~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|++  +++|.++++.+...|++|+++.++.+..   +.+ ++++....+..+-.+. ++++++.+..  ..+
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHcC
Confidence            47899999997  4899999999999999999998875432   222 2344333332222221 2233333322  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus        88 ~ld~lv~nAg   97 (258)
T PRK07533         88 RLDFLLHSIA   97 (258)
T ss_pred             CCCEEEEcCc
Confidence            7899999887

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.007  Score=51.88  Aligned_cols=76  Identities=28%  Similarity=0.445  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.++    ...+.. ..+  |..+.   +..++.....  ..+.+|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~id   77 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDP---DQVAALVDAIVERHGRLD   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCH---HHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998764    122211 122  22222   1123322221  124689


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++|.++|.
T Consensus        78 ~vi~~ag~   85 (252)
T PRK07856         78 VLVNNAGG   85 (252)
T ss_pred             EEEECCCC
Confidence            99999873

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.01  E-value=0.01  Score=47.45  Aligned_cols=99  Identities=21%  Similarity=0.398  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...++++|+.++=+|+  +.|...++++... ..+|+++++++++.+..    +++|.+.+.......     .+.+.  
T Consensus        28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A-----p~~L~--   98 (187)
T COG2242          28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA-----PEALP--   98 (187)
T ss_pred             HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc-----hHhhc--
Confidence            4677899998888887  4577788888443 45999999999987766    457866433222211     11221  


Q ss_pred             cCCcccEEEeCCCc---cchHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~  250 (347)
                      +...+|.+|---|.   ..++.++..|+++|++|.-
T Consensus        99 ~~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n  134 (187)
T COG2242          99 DLPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN  134 (187)
T ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence            22368999865543   4578899999999999974

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.00  E-value=0.0068  Score=52.02  Aligned_cols=79  Identities=24%  Similarity=0.329  Sum_probs=51.0

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC--cEEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~--~~v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|++  +++|.++++.+...|++|+++.+++...+.++++..  ...+  |..+.   +++++..+..  ..+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~g   82 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD---ESIERAFATIKERVG   82 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCH---HHHHHHHHHHHHHhC
Confidence            57899999998  699999999998999999999887433333344321  1122  22221   2233333322  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus        83 ~iD~lv~nAg   92 (252)
T PRK06079         83 KIDGIVHAIA   92 (252)
T ss_pred             CCCEEEEccc
Confidence            7999999887

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.99  E-value=0.008  Score=51.70  Aligned_cols=80  Identities=24%  Similarity=0.346  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEE-E--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV-V--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v-~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||.|++|++|..+++.+...|++|+++++++++.+.+    ++.+.... +  |..+.+   .+.......  ..
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED---AVNAGIDKVAERF   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH---HHHHHHHHHHHHc
Confidence            468999999999999999999999999999999988655433    23343322 1  222222   122222211  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.++|.
T Consensus        83 ~~~d~vi~~ag~   94 (262)
T PRK13394         83 GSVDILVSNAGI   94 (262)
T ss_pred             CCCCEEEECCcc
Confidence            468999998874

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0071  Score=51.62  Aligned_cols=78  Identities=26%  Similarity=0.401  Sum_probs=51.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVD-HVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~-~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      +++++|.|++|++|...++.+...|++|+++++++++.+.+..    .  +.. +++  |..+.   ++.....+..  .
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH---DQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH---HHHHHHHHHHHHH
Confidence            5689999999999999998888889999999998876654422    1  211 222  33322   1233322221  2


Q ss_pred             CCcccEEEeCCC
Q 019049          219 LKGVDVLYDPVG  230 (347)
Q Consensus       219 ~~~~d~v~d~~g  230 (347)
                      .+++|+++.++|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence            347899999987

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.98  E-value=0.007  Score=51.40  Aligned_cols=80  Identities=28%  Similarity=0.425  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEE---eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVV---DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~---~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      +++++||+|++|++|...++.+...|++|+++.+++++.+..    ++.+....+   |..+..   .+.......  ..
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA---AVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH---HHHHHHHHHHHHh
Confidence            457899999999999999999988999999999988765433    333432222   333222   122222211  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      ..+|.++.++|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            468999999864

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.97  E-value=0.0093  Score=48.71  Aligned_cols=99  Identities=22%  Similarity=0.205  Sum_probs=61.1

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc-C-CEEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHhcCC
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-G-ATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g-~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      ...+.++++||..|+ |.-+ .+..+++.. + .+|++++.++.+    ...++..+ .|..+...   ...+.+.+...
T Consensus        27 ~~~i~~g~~VLDiG~-GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~---~~~l~~~~~~~   97 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-APGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEV---LNKIRERVGDD   97 (188)
T ss_pred             hcccCCCCEEEEecC-CCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhH---HHHHHHHhCCC
Confidence            456789999999998 4434 444444443 3 489999998764    22333322 13322222   33444555666


Q ss_pred             cccEEEe-CC----Cc-------------cchHHHHhccccCCEEEEEe
Q 019049          221 GVDVLYD-PV----GG-------------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       221 ~~d~v~d-~~----g~-------------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ++|+|+. ..    |.             ..+..+.+.|+++|+++...
T Consensus        98 ~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        98 KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            8999995 22    21             23466788999999999753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.96  E-value=0.0028  Score=50.15  Aligned_cols=94  Identities=19%  Similarity=0.357  Sum_probs=62.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|.|+|++|-+|...++-|...|.+|++++++++|....+..-   ++   ..+..+ .....+.  -.++|+||++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~---i~---q~Difd-~~~~a~~--l~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVT---IL---QKDIFD-LTSLASD--LAGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccce---ee---cccccC-hhhhHhh--hcCCceEEEeccC
Confidence            6899999999999999999999999999999998775432111   11   111111 1111122  2589999998875


Q ss_pred             c----------chHHHHhccccCC--EEEEEeecC
Q 019049          232 K----------LTKESLKLLNWGA--QILVIGFAS  254 (347)
Q Consensus       232 ~----------~~~~~~~~l~~~G--~~v~~g~~~  254 (347)
                      .          ..+.++..++..|  |+..+|..+
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            2          1233567777744  777776543

>PRK07985 oxidoreductase; Provisional

Probab=96.96  E-value=0.014  Score=51.28  Aligned_cols=79  Identities=24%  Similarity=0.288  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHH----HhcCCcE-E--EeCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL----KSLGVDH-V--VDLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++++|.|+++++|..+++.+...|++|+++.++.  ++.+.+    ++.|... .  .|..+.   +.+.+..+..  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~  124 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE---KFARSLVHEAHK  124 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH---HHHHHHHHHHHH
Confidence            567999999999999999999999999999876542  222222    2334221 1  233322   2233332221  


Q ss_pred             cCCcccEEEeCCC
Q 019049          218 KLKGVDVLYDPVG  230 (347)
Q Consensus       218 ~~~~~d~v~d~~g  230 (347)
                      ..+++|+++++.|
T Consensus       125 ~~g~id~lv~~Ag  137 (294)
T PRK07985        125 ALGGLDIMALVAG  137 (294)
T ss_pred             HhCCCCEEEECCC
Confidence            2357899998876

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0067  Score=51.85  Aligned_cols=82  Identities=24%  Similarity=0.339  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c--CCc-EEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L--GVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~--g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|.|++|++|..+++.+...|++|+++.++.++.+...+ +  +.. ..+..+-.+. +.+++..+..  ..+++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCC
Confidence            46799999999999999999888889999999998775544332 2  321 2222221111 1133332221  12478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+++.++|.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.011  Score=50.32  Aligned_cols=83  Identities=23%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ..+++++|.|++|++|..++..+...|++|+++++++++.+.+.    +.+.. .++..+-.+. +......+..  ..+
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            35679999999999999999999999999999999887654442    22322 1222221111 1122222221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|+++.++|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            68999999884

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0047  Score=52.44  Aligned_cols=82  Identities=26%  Similarity=0.281  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC----cEEEeCCCC---CchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV----DHVVDLSNE---SVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~----~~v~~~~~~---~~~~~~~~~~~~~  217 (347)
                      ++++++|.|++|++|...++.+...|++|+++++++++.+.+.    +.+.    ....|..+.   .+....+.+....
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999887655442    2221    111233221   1211122233322


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                       ...+|+++.++|.
T Consensus        85 -~~~id~vi~~ag~   97 (239)
T PRK08703         85 -QGKLDGIVHCAGY   97 (239)
T ss_pred             -CCCCCEEEEeccc
Confidence             1468999999883

>PRK08264 short chain dehydrogenase; Validated

Probab=96.95  E-value=0.0076  Score=51.08  Aligned_cols=75  Identities=33%  Similarity=0.421  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .+++++|.|++|++|..+++.+...|+ +|+++.++.++.+.   .+.. .++  |..+.   +.+.+..+..  ..+|+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~---~~~~~~~~~~--~~id~   76 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP---ASVAAAAEAA--SDVTI   76 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH---HHHHHHHHhc--CCCCE
Confidence            567999999999999999999999999 99999998765443   2211 122  22222   2234444332  35899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +|.+.|.
T Consensus        77 vi~~ag~   83 (238)
T PRK08264         77 LVNNAGI   83 (238)
T ss_pred             EEECCCc
Confidence            9998875

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.95  E-value=0.025  Score=48.57  Aligned_cols=154  Identities=22%  Similarity=0.249  Sum_probs=96.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCC-----------CchhhHHHHH
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE-----------SVIPSVKEFL  214 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~-----------~~~~~~~~~~  214 (347)
                      +-.++.++++.|. |..|+.++..++..|+-|+..+..+.+.+..+++|+...-..+.+           +|.....+..
T Consensus       160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~  238 (356)
T COG3288         160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV  238 (356)
T ss_pred             ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence            3346678999999 999999999999999999999999999999998886543321111           1111111111


Q ss_pred             HHhcCCcccEEEeCCC--c---cc--hHHHHhccccCCEEEEEeecCCCC-C-CcchhHhhhcceEEEEEE-ec-ccccc
Q 019049          215 KARKLKGVDVLYDPVG--G---KL--TKESLKLLNWGAQILVIGFASGEI-P-VIPANIALVKNWTVHGLY-WG-SYKIH  283 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g--~---~~--~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~-~~~~~  283 (347)
                      .. .-.++|+||-|.=  +   +.  ...+...|+|+..+|++..-.+.. . ..+......++.++.|.. +. +....
T Consensus       239 a~-~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~  317 (356)
T COG3288         239 AE-QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQ  317 (356)
T ss_pred             HH-HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhh
Confidence            11 2358999998863  2   22  367899999999999986544321 1 122233456677777643 11 12222


Q ss_pred             CchhHHHHHHHHHHHHHc
Q 019049          284 RPHVLEDSLRELLLWAAK  301 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~  301 (347)
                      ...++..++-.+++++-+
T Consensus       318 aS~LYa~Nl~~~l~ll~~  335 (356)
T COG3288         318 ASQLYATNLVNLLKLLCK  335 (356)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            333445556666665544

>PRK06484 short chain dehydrogenase; Validated

Probab=96.95  E-value=0.0059  Score=58.39  Aligned_cols=80  Identities=35%  Similarity=0.534  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcE---EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH---VVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      ++++++|+|+++++|..+++.+...|++|++++++.++.+.+ ++++...   ..|..+.+   ..++..+..  ..+++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEA---QIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH---HHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999988876655 3455332   22333322   233333221  12478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.94  E-value=0.0086  Score=51.37  Aligned_cols=80  Identities=26%  Similarity=0.358  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+...    ..+... .+  |..+..   .+++..+..  ..
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~   79 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEE---AINAGIDYAVETF   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH---HHHHHHHHHHHHc
Confidence            4679999999999999999998889999999999887665442    223221 22  222221   233332221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      .++|++|.+++.
T Consensus        80 ~~~d~vi~~a~~   91 (258)
T PRK12429         80 GGVDILVNNAGI   91 (258)
T ss_pred             CCCCEEEECCCC
Confidence            468999998873

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.94  E-value=0.008  Score=44.27  Aligned_cols=93  Identities=18%  Similarity=0.325  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEecChhhHHHHHh-c---CC-cEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKS-L---GV-DHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~-~~g~~V~~~~~~~~~~~~~~~-~---g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      |+.+||-.|+  +.|..+..+++ ..+++|++++.+++-.+.+++ .   +. +.+ .....++      .........|
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~d~------~~~~~~~~~~   71 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRI-TFVQGDA------EFDPDFLEPF   71 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEESCC------HGGTTTSSCE
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEECcc------ccCcccCCCC
Confidence            6789999998  45888888888 578899999999997777753 2   21 111 1111111      0011124579


Q ss_pred             cEEEeCC-Cc----c------chHHHHhccccCCEEEEE
Q 019049          223 DVLYDPV-GG----K------LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       223 d~v~d~~-g~----~------~~~~~~~~l~~~G~~v~~  250 (347)
                      |+|+... ..    +      .++.+.+.|+|+|+++.-
T Consensus        72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            9999876 32    1      256788999999999863

...

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0092  Score=52.30  Aligned_cols=37  Identities=32%  Similarity=0.494  Sum_probs=32.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      -.+++++|.|+++++|...++.+...|++|++++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence            3678999999999999999999988999999887654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.93  E-value=0.0066  Score=54.71  Aligned_cols=93  Identities=20%  Similarity=0.257  Sum_probs=65.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcC--C--cEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG--V--DHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g--~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+|||.|+ |.+|..+++.+...| .+|++.+++.+++..+....  .  ...+|..+.      ++..+..  .++|+|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~------~al~~li--~~~d~V   72 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV------DALVALI--KDFDLV   72 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh------HHHHHHH--hcCCEE
Confidence            47999999 999999999988888 79999999999998886653  1  223343332      2333333  345999


Q ss_pred             EeCCCccchHHHH-hccccCCEEEEEee
Q 019049          226 YDPVGGKLTKESL-KLLNWGAQILVIGF  252 (347)
Q Consensus       226 ~d~~g~~~~~~~~-~~l~~~G~~v~~g~  252 (347)
                      |++.+......++ .+++.+=.++.+..
T Consensus        73 In~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          73 INAAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             EEeCCchhhHHHHHHHHHhCCCEEEccc
Confidence            9999976555555 45555556666543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.93  E-value=0.012  Score=50.56  Aligned_cols=81  Identities=22%  Similarity=0.323  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||.|+++++|...++.+...|++|+++.++ ++.+.+    .+.+.. ..+..+-.+ .+..+.+.+..  ..+.
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999887 332222    233422 222222111 12233333221  1246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0067  Score=52.73  Aligned_cols=37  Identities=38%  Similarity=0.575  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence            4679999999999999999999899999999998654

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.011  Score=51.37  Aligned_cols=78  Identities=22%  Similarity=0.363  Sum_probs=52.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc-EE--EeCCCCCchhhHHHHHHH--hcCCcccE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HV--VDLSNESVIPSVKEFLKA--RKLKGVDV  224 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~~~~d~  224 (347)
                      +++||+|++|++|..+++.+...|++|+++.++.++.+.++. .+.. .+  .|..+.+   ++.+....  ....++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA---AVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH---HHHHHHHHHHHHcCCCCE
Confidence            579999999999999999988899999999999887666543 2321 11  2223221   13332221  12346899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +|.++|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.91  E-value=0.012  Score=50.55  Aligned_cols=79  Identities=24%  Similarity=0.472  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.++.+.+. +++.. ..+  |..+.+   ..+...+..  ..+.+
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQD---SIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH---HHHHHHHHHHHHcCCC
Confidence            3679999999999999999999999999999999888765554 33322 112  222221   122222221  12468


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |+++.++|
T Consensus        82 d~li~~ag   89 (257)
T PRK07067         82 DILFNNAA   89 (257)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.91  E-value=0.01  Score=50.40  Aligned_cols=82  Identities=23%  Similarity=0.333  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|++|++|..++..+...|++|+++++++++.+..    +..+... ++..+-.+. +.+....+..  ..++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY-EEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            357899999999999999998889999999999987765443    2223221 222221111 2233333321  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|.++|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.90  E-value=0.004  Score=58.91  Aligned_cols=74  Identities=23%  Similarity=0.279  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+.++++|+|.|. |..|++++++++..|++|++.+.++.+.+.+++.|+..+ .... .    ...+      ..+|+|
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~----~~~l------~~~D~V   74 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD-A----VQQI------ADYALV   74 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-h----HhHh------hcCCEE
Confidence            3557899999999 999999999999999999999987776666777787433 2111 1    1111      357999


Q ss_pred             EeCCCcc
Q 019049          226 YDPVGGK  232 (347)
Q Consensus       226 ~d~~g~~  232 (347)
                      +.+.|-+
T Consensus        75 V~SpGi~   81 (488)
T PRK03369         75 VTSPGFR   81 (488)
T ss_pred             EECCCCC
Confidence            9998853

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.90  E-value=0.011  Score=50.94  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=51.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +++|+|+++++|...++.+...|++|+++++++++.+.+.    +.+..+.+..+-.+. +..+++.+..  ..+++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999999999999999887654442    223222232222121 2233333221  12478999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        81 i~naG~   86 (259)
T PRK08340         81 VWNAGN   86 (259)
T ss_pred             EECCCC
Confidence            999873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.90  E-value=0.012  Score=50.42  Aligned_cols=82  Identities=20%  Similarity=0.296  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCc-EEEeCCCCCchhhHHHHHHH--hcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVD-HVVDLSNESVIPSVKEFLKA--RKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~d  223 (347)
                      .+++++|.|++|++|.++++.+...|++|+.++++..  ..+.++..+.. ..+..+-.+ .++.+.+.+.  ...+.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999998876432  12333334422 112221111 1223333322  1124789


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.90  E-value=0.0079  Score=51.81  Aligned_cols=81  Identities=21%  Similarity=0.262  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cC---CcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LG---VDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g---~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      -|++.+|.|++.++|.+-+.-+.+.|.+|+.+.|+.+|++..++     .+   ...++|+.+.+.  .-+.+.+.+.+.
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~--~ye~i~~~l~~~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE--VYEKLLEKLAGL  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch--hHHHHHHHhcCC
Confidence            36899999999999998776666699999999999999987742     23   234567766653  246677777777


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+-+.+|++|-
T Consensus       126 ~VgILVNNvG~  136 (312)
T KOG1014|consen  126 DVGILVNNVGM  136 (312)
T ss_pred             ceEEEEecccc
Confidence            78889999984

>PLN02476 O-methyltransferase

Probab=96.89  E-value=0.01  Score=51.12  Aligned_cols=106  Identities=17%  Similarity=0.266  Sum_probs=71.0

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....++.+.++||-+|.  .+|..++.+++.+  +.+|+.++.+++..+.++    +.|..+-+.....+..+.+++...
T Consensus       111 ~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~  188 (278)
T PLN02476        111 AMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQ  188 (278)
T ss_pred             HHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence            34666778899999996  6688888888876  447999999998776664    456543334334444222333221


Q ss_pred             HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049          216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  249 (347)
                      ......||.||--...    ..++.++++++++|.++.
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence            1123579998855543    356788999999999886

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.012  Score=51.19  Aligned_cols=83  Identities=28%  Similarity=0.291  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +.++++|+|++|++|..+++.+...|++|++++++.++.+..    +..+....+..-+..-.++..++....  ..+++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            346899999999999999998888999999999877654433    223432221111111112233333321  12468


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|.++|.
T Consensus        89 d~vi~~Ag~   97 (274)
T PRK07775         89 EVLVSGAGD   97 (274)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0091  Score=51.49  Aligned_cols=79  Identities=27%  Similarity=0.380  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cCCcE-EE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVDH-VV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.+..+..++   .+... .+  |..+.   +.++......  ..+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDP---ASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH---HHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999987653333322   23221 12  22222   1223322211  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++|.++|
T Consensus        82 ~id~vi~~ag   91 (263)
T PRK08226         82 RIDILVNNAG   91 (263)
T ss_pred             CCCEEEECCC
Confidence            6899999888

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.87  E-value=0.0082  Score=48.02  Aligned_cols=103  Identities=25%  Similarity=0.304  Sum_probs=69.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCC--------------chhhHHHHHH
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES--------------VIPSVKEFLK  215 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~--------------~~~~~~~~~~  215 (347)
                      ..+|+|.|+ |.+|..++++++.+|++|++.+..+++.+.....++..+.......              .......+.+
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            368999999 9999999999999999999999999988888887765443311000              1111223333


Q ss_pred             HhcCCcccEEEeCC---Cc--cc--hHHHHhccccCCEEEEEeecCC
Q 019049          216 ARKLKGVDVLYDPV---GG--KL--TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       216 ~~~~~~~d~v~d~~---g~--~~--~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      ..  ..+|+++.+.   +.  +.  .+..++.|+++..++++....+
T Consensus        99 ~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g  143 (168)
T PF01262_consen   99 FI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG  143 (168)
T ss_dssp             HH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred             HH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence            33  3578888532   22  22  3778899999999999876543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.87  E-value=0.005  Score=52.88  Aligned_cols=95  Identities=25%  Similarity=0.403  Sum_probs=71.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+|.|+|+ |.+|.-++.+|.-+|++|+..+.+.+|++.+.. ++.. +++-++.       ..+.+..  .+.|++|.+
T Consensus       169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~-------~~iee~v--~~aDlvIga  238 (371)
T COG0686         169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP-------SNIEEAV--KKADLVIGA  238 (371)
T ss_pred             ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH-------HHHHHHh--hhccEEEEE
Confidence            47888899 999999999999999999999999999998875 4443 3332222       2222222  467888875


Q ss_pred             C---Cc--c--chHHHHhccccCCEEEEEeecCC
Q 019049          229 V---GG--K--LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       229 ~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +   |.  +  ..++.+..|+|++.++++....+
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG  272 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG  272 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence            4   32  2  35788999999999999987765

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.011  Score=51.46  Aligned_cols=81  Identities=20%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCC-cEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV-DHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~-~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +++|+|.|++|++|..+++.+...|++|++++++.++.+.+.+ .+. ...+..+-.+ .+++.......  ..+++|.+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999888889999999998887665543 221 1222221111 11222222211  12478999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      +.++|.
T Consensus        82 i~~ag~   87 (275)
T PRK08263         82 VNNAGY   87 (275)
T ss_pred             EECCCC
Confidence            999884

>PRK12743 oxidoreductase; Provisional

Probab=96.87  E-value=0.01  Score=50.97  Aligned_cols=79  Identities=28%  Similarity=0.318  Sum_probs=49.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHH----HHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKF----LKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~----~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      +++++|.|+++++|..+++.+...|++|+++.+ +.++.+.    ++..|.. +.+  |..+..   .++...+..  ..
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLP---EGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHH---HHHHHHHHHHHHc
Confidence            468999999999999999999999999988754 3333322    2334532 222  222221   122222221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.++|.
T Consensus        79 ~~id~li~~ag~   90 (256)
T PRK12743         79 GRIDVLVNNAGA   90 (256)
T ss_pred             CCCCEEEECCCC
Confidence            468999998874

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.013  Score=50.48  Aligned_cols=79  Identities=22%  Similarity=0.198  Sum_probs=52.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCC---cEEE--eCCCCCchhhHHHHHHHh--cCCc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV---DHVV--DLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~---~~v~--~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++++|+|++|++|..++..+...|++|++++++.++.+...+ +..   ...+  |..+.   +.+.+..+..  ..+.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA---DALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH---HHHHHHHHHHHHhCCC
Confidence            4689999999999999999998899999999998887655432 221   1122  22221   1233322221  1235


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        79 id~lv~~ag~   88 (257)
T PRK07024         79 PDVVIANAGI   88 (257)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.01  Score=51.42  Aligned_cols=79  Identities=20%  Similarity=0.197  Sum_probs=51.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +++|.|++|++|...+..+...|++|++++++.++.+.+    +..+... .+..+-.+ .+......+..  ..+++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            799999999999999998888999999999988765543    2233222 22121111 11233333221  1247899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +|.++|.
T Consensus        81 lI~~ag~   87 (270)
T PRK05650         81 IVNNAGV   87 (270)
T ss_pred             EEECCCC
Confidence            9999884

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.87  E-value=0.045  Score=45.12  Aligned_cols=79  Identities=20%  Similarity=0.239  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|+|+|. |.+|..+++.+...|++|++++.+.++.+.+.+ +|+.. ++..  ++           ....+|+++-
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~--~l-----------~~~~~Dv~vp   91 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE--EI-----------YSVDADVFAP   91 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch--hh-----------ccccCCEEEe
Confidence            5789999999 999999999999999999999999887776654 46532 2221  11           1136899986


Q ss_pred             CCCcc-chHHHHhccc
Q 019049          228 PVGGK-LTKESLKLLN  242 (347)
Q Consensus       228 ~~g~~-~~~~~~~~l~  242 (347)
                      |+... .....+..++
T Consensus        92 ~A~~~~I~~~~~~~l~  107 (200)
T cd01075          92 CALGGVINDDTIPQLK  107 (200)
T ss_pred             cccccccCHHHHHHcC
Confidence            65543 3344555554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.87  E-value=0.012  Score=49.85  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=51.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcE-EEeCCCCCchhhHHHHHHHhc--CCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDH-VVDLSNESVIPSVKEFLKARK--LKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~--~~~~d~v  225 (347)
                      ++++||.|+++++|..+++.+...|++|+++++++++. +.++..|+.. ..|..+.+   .++...+...  .+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA---GIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH---HHHHHHHHHHhhCCCccEE
Confidence            46899999999999999999999999999999876532 3334455321 12222221   1333332221  2468999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998873

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.86  E-value=0.0099  Score=50.72  Aligned_cols=82  Identities=24%  Similarity=0.281  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|++|.+|...+..+...|++|++++++.++....    +..+.. .++..+-.+ .+.++......  ....
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            467999999999999999998888999999999986654332    223322 122111111 12233332211  1246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|.++.+.|.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.86  E-value=0.013  Score=51.05  Aligned_cols=79  Identities=20%  Similarity=0.307  Sum_probs=52.1

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChh---hHHHH-HhcCCcEE--EeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFL-KSLGVDHV--VDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~-~~~g~~~v--~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|+|++  +++|.++++.+...|++|+++.++.+   +.+.+ ++++....  .|..+.+   +++.+.+..  .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~---~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE---HFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH---HHHHHHHHHHHH
Confidence            47899999996  69999999999999999999988742   33333 34453322  2333322   233333322  1


Q ss_pred             CCcccEEEeCCC
Q 019049          219 LKGVDVLYDPVG  230 (347)
Q Consensus       219 ~~~~d~v~d~~g  230 (347)
                      .+.+|++++++|
T Consensus        81 ~g~iDilVnnAG   92 (274)
T PRK08415         81 LGKIDFIVHSVA   92 (274)
T ss_pred             cCCCCEEEECCc
Confidence            357999999987

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.84  E-value=0.015  Score=49.38  Aligned_cols=82  Identities=30%  Similarity=0.396  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      ++++++|.|++|++|..++..+...|+.|+...++.++.+.+. .++.. .++..+ ..-.++++......  ..+++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPAN-LSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999999999889999998888777665543 33422 122221 11112233332211  1247899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ++.++|.
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            9999874

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.84  E-value=0.015  Score=50.22  Aligned_cols=111  Identities=20%  Similarity=0.181  Sum_probs=74.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cC--CcEEEeCCCC-CchhhHHHHHHHhcCCc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LG--VDHVVDLSNE-SVIPSVKEFLKARKLKG  221 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g--~~~v~~~~~~-~~~~~~~~~~~~~~~~~  221 (347)
                      .+++.|+|+|+.+++|..++.-+...|.+|++.+..++-.+.++.   .+  -...+|..++ +..+..+.+...++..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            467789999999999999999999999999999977765555532   12  1223444433 33333444445567777


Q ss_pred             ccEEEeCCCcc---------------------------chHHHHhcccc-CCEEEEEeecCCCCC
Q 019049          222 VDVLYDPVGGK---------------------------LTKESLKLLNW-GAQILVIGFASGEIP  258 (347)
Q Consensus       222 ~d~v~d~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~~~  258 (347)
                      .-.++|++|..                           .....+-++++ .||+|.++...+..+
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~  171 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA  171 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc
Confidence            88899999821                           11222334554 499999987766443

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.01  Score=51.59  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      +++++||.|++|++|..+++.+...|++|++++++.++.+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~   46 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA   46 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            46899999999999999999999999999999998765443

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.83  E-value=0.0081  Score=52.64  Aligned_cols=144  Identities=13%  Similarity=0.129  Sum_probs=81.5

Q ss_pred             CCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh-cCCCCCCEEEEecCCchHHHHHH
Q 019049           89 FKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAV  167 (347)
Q Consensus        89 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~-~~~~~~~~VlI~g~~g~~G~~~~  167 (347)
                      +.+|++.+-..   .|.++...+....+.+.+++.|-.+.    ...|.. ++... ....++++||-.|+ |. |.+++
T Consensus       106 ~~~g~~~~i~p---~w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l-~l~~l~~~~~~g~~VLDvGc-Gs-G~lai  175 (288)
T TIGR00406       106 VQFGKRFWICP---SWRDVPSDEDALIIMLDPGLAFGTGT----HPTTSL-CLEWLEDLDLKDKNVIDVGC-GS-GILSI  175 (288)
T ss_pred             EEEcCeEEEEC---CCcCCCCCCCcEEEEECCCCcccCCC----CHHHHH-HHHHHHhhcCCCCEEEEeCC-Ch-hHHHH
Confidence            56677555442   34333222334566677776554421    112222 22111 12457899999998 54 77776


Q ss_pred             HHHHHcCC-EEEEEecChhhHHHHHhc----CCcE-EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc----cchHHH
Q 019049          168 QIGKVCGA-TIIAVARGAEKIKFLKSL----GVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG----KLTKES  237 (347)
Q Consensus       168 ~la~~~g~-~V~~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~----~~~~~~  237 (347)
                      .+++ .|+ +|++++.++...+.+++.    +... +..... +.       .. .....||+|+.....    ..+..+
T Consensus       176 ~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~-------~~-~~~~~fDlVvan~~~~~l~~ll~~~  245 (288)
T TIGR00406       176 AALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YL-------EQ-PIEGKADVIVANILAEVIKELYPQF  245 (288)
T ss_pred             HHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-cc-------cc-ccCCCceEEEEecCHHHHHHHHHHH
Confidence            6665 566 899999998877766542    2111 111110 00       00 113579999865543    234667


Q ss_pred             HhccccCCEEEEEee
Q 019049          238 LKLLNWGAQILVIGF  252 (347)
Q Consensus       238 ~~~l~~~G~~v~~g~  252 (347)
                      .+.|+++|.++..|.
T Consensus       246 ~~~LkpgG~li~sgi  260 (288)
T TIGR00406       246 SRLVKPGGWLILSGI  260 (288)
T ss_pred             HHHcCCCcEEEEEeC
Confidence            899999999998663

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=96.83  E-value=0.0031  Score=52.04  Aligned_cols=105  Identities=16%  Similarity=0.285  Sum_probs=69.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ...+..+.++||-+|.  .+|+.++.+++.+  +.+|+.++.++++.+.++    ..|...-+.....+..+.+.++...
T Consensus        39 ~l~~~~~~k~vLEIGt--~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~  116 (205)
T PF01596_consen   39 MLVRLTRPKRVLEIGT--FTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELAND  116 (205)
T ss_dssp             HHHHHHT-SEEEEEST--TTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHT
T ss_pred             HHHHhcCCceEEEecc--ccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhc
Confidence            4455567789999995  6788888888876  579999999999877774    3554333333334442223333332


Q ss_pred             hcCCcccEEE-eCCCc---cchHHHHhccccCCEEEE
Q 019049          217 RKLKGVDVLY-DPVGG---KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       217 ~~~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~  249 (347)
                      ...+.||.|| |+.-.   ..+..++.+++++|.++.
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~  153 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIA  153 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEE
Confidence            2235799997 44433   346778899999999886

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.82  E-value=0.012  Score=50.71  Aligned_cols=81  Identities=20%  Similarity=0.131  Sum_probs=51.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCC--cEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGV--DHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~--~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ++++||.|++|++|...+..+...|++|+.++++..+.+... +    .+.  ...+..+-.+ .+.+.......  ..+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            568999999999999999999889999999998876554332 1    221  1222222111 12233333222  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        81 ~id~vv~~ag~   91 (259)
T PRK12384         81 RVDLLVYNAGI   91 (259)
T ss_pred             CCCEEEECCCc
Confidence            78999999873

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.82  E-value=0.012  Score=50.82  Aligned_cols=82  Identities=15%  Similarity=0.184  Sum_probs=49.9

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|+  ++++|.+.++.+...|++|+++.+++...+.++    +.|....+..+-.+ .++++.+.+..  ..+
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            5789999996  579999999999999999998765432222222    23432222222212 12233333221  135


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            79999999873

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.82  E-value=0.015  Score=49.65  Aligned_cols=81  Identities=23%  Similarity=0.265  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++++||.|++|++|..+++.+...|++|++++++.++.+.+.    +.+.. .++..+-.+ .++++...+..  ...+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999998887655442    22322 222222111 12233333221  1246


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++|.+.|
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.81  E-value=0.013  Score=50.63  Aligned_cols=79  Identities=24%  Similarity=0.379  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChh---hHHHH-HhcCCcEE--EeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAE---KIKFL-KSLGVDHV--VDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~-~~~g~~~v--~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|+++  ++|.++++.+...|++|+.+.+++.   ..+.+ ++.|....  .|..+.+   ++++..+..  .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~---~v~~~~~~~~~~   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK---SISNLFDDIKEK   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH---HHHHHHHHHHHH
Confidence            578999999986  8999999988889999998887642   12222 23353332  2333322   233333322  1


Q ss_pred             CCcccEEEeCCC
Q 019049          219 LKGVDVLYDPVG  230 (347)
Q Consensus       219 ~~~~d~v~d~~g  230 (347)
                      .+.+|++++++|
T Consensus        84 ~g~iDilVnnag   95 (260)
T PRK06603         84 WGSFDFLLHGMA   95 (260)
T ss_pred             cCCccEEEEccc
Confidence            247999999876

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.81  E-value=0.0097  Score=51.27  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=48.4

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh------hhHHHHHhcCC-cEE--EeCCCCCchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA------EKIKFLKSLGV-DHV--VDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~------~~~~~~~~~g~-~~v--~~~~~~~~~~~~~~~~~~~  217 (347)
                      .+++++|.|++  +++|.+++..+...|++|+++.++.      +..+.+++.+. ...  .|..+.   +++++..+..
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~   81 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDD---AQIEETFETI   81 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCH---HHHHHHHHHH
Confidence            47899999985  7999999999999999998875432      22233332221 112  233222   2233333222


Q ss_pred             --cCCcccEEEeCCC
Q 019049          218 --KLKGVDVLYDPVG  230 (347)
Q Consensus       218 --~~~~~d~v~d~~g  230 (347)
                        ..+.+|++++++|
T Consensus        82 ~~~~g~iD~lv~nag   96 (258)
T PRK07370         82 KQKWGKLDILVHCLA   96 (258)
T ss_pred             HHHcCCCCEEEEccc
Confidence              1247999999987

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.81  E-value=0.013  Score=50.57  Aligned_cols=82  Identities=22%  Similarity=0.272  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|.|+++++|..++..+...|++|+++.+++++.+.+.    ..|... .+..+-.+ .++++......  ..+.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCCC
Confidence            5679999999999999999888889999999998887654432    334322 22222111 12223333221  1246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++.++|.
T Consensus        88 id~li~~ag~   97 (265)
T PRK07097         88 IDILVNNAGI   97 (265)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.80  E-value=0.013  Score=50.35  Aligned_cols=80  Identities=24%  Similarity=0.428  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|.|+++++|..++..+...|++|++++++.++.+.+.    ..+.. .++  |..+.   +++.+.....  ..
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~---~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE---QELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999998877654432    23322 122  22222   1122222211  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.++|.
T Consensus        87 ~~~d~li~~ag~   98 (255)
T PRK06113         87 GKVDILVNNAGG   98 (255)
T ss_pred             CCCCEEEECCCC
Confidence            468999999873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.77  E-value=0.036  Score=46.21  Aligned_cols=97  Identities=22%  Similarity=0.326  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcE--EEeCCCCCchhhHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDH--VVDLSNESVIPSVKEFL  214 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~~  214 (347)
                      ....++++++||-+|+  +.|..++.+++..+  .+|++++.+++-.+.+++    .|...  +...+....        
T Consensus        70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~--------  139 (212)
T PRK13942         70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG--------  139 (212)
T ss_pred             HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC--------
Confidence            5677899999999997  56777888887765  599999999886665543    44322  222111110        


Q ss_pred             HHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049          215 KARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  250 (347)
                       ......||.|+-+... .....+.+.|+++|+++..
T Consensus       140 -~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        140 -YEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             -CCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence             0123579999765543 4446788999999998875

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.015  Score=50.59  Aligned_cols=80  Identities=26%  Similarity=0.388  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC---cEEE--eCCCCCchhhHHHHHHH-hc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVV--DLSNESVIPSVKEFLKA-RK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~---~~v~--~~~~~~~~~~~~~~~~~-~~  218 (347)
                      .++++||.|++|++|...+..+...|++|++++++.++.+...+    .+.   ..++  |..+.+   ..+.+.+. ..
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~~~   78 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQN---SIHNFQLVLKE   78 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHH---HHHHHHHHHHh
Confidence            35789999999999999999988899999999998776554422    221   1222  333222   12222111 12


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|+++.++|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence            2478999999874

>PLN02253 xanthoxin dehydrogenase

Probab=96.75  E-value=0.011  Score=51.42  Aligned_cols=80  Identities=26%  Similarity=0.318  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC---cEE--EeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV---DHV--VDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~---~~v--~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|++|++|..+++.+...|++|+++++++++.+.+ .+++.   ...  .|..+.+.   +++..+..  ..+
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDD---VSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHH---HHHHHHHHHHHhC
Confidence            467999999999999999998888999999999877654433 23321   111  23333221   22222211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.75  E-value=0.015  Score=51.54  Aligned_cols=99  Identities=21%  Similarity=0.351  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +...++++++||..|+ | .|..++.+++..+.  +|++++.+++..+.++    ..|.+.+..... +.   .+..   
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~---~~~~---  144 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DG---YYGV---  144 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-Ch---hhcc---
Confidence            4567889999999998 5 69999999988764  6999999988665554    356543332211 21   1100   


Q ss_pred             hcCCcccEEEeCCCccc-hHHHHhccccCCEEEEE
Q 019049          217 RKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVI  250 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  250 (347)
                      .....||+|+.+.+.+. ...+++.|+++|+++..
T Consensus       145 ~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        145 PEFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             cccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            11246999998877543 35678999999998874

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.016  Score=48.70  Aligned_cols=75  Identities=17%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEE-EeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++|.|++|++|...++.+...|++|+++.++.++.+.+. +++...+ .|..+.   +.+++..+... ..+|+++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~-~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDP---ASLEEARGLFP-HHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCH---HHHHHHHHHHh-hcCcEEEECC
Confidence            5899999999999999999889999999999888766553 4443322 233322   22444444332 2689999886


Q ss_pred             C
Q 019049          230 G  230 (347)
Q Consensus       230 g  230 (347)
                      |
T Consensus        78 g   78 (223)
T PRK05884         78 A   78 (223)
T ss_pred             C
Confidence            5

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.71  E-value=0.013  Score=50.36  Aligned_cols=82  Identities=17%  Similarity=0.293  Sum_probs=51.2

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecCh--hhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|+  ++++|.++++.+...|++|++++++.  +..+.+ ++++.. ..+..+-.+ .++++++.+..  ..+
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHVD   84 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            5689999998  79999999999989999999988653  323333 334321 122221111 12233333322  135


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        85 ~iD~li~nAG~   95 (256)
T PRK07889         85 GLDGVVHSIGF   95 (256)
T ss_pred             CCcEEEEcccc
Confidence            79999998873

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.71  E-value=0.018  Score=50.96  Aligned_cols=83  Identities=25%  Similarity=0.314  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHH----HHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKF----LKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~  222 (347)
                      .+++++|.|+++++|...++.+...|++|++.+++. ++.+.    ++..|........+..-.+....+.+.. ..+.+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999987643 22222    2333433222222222122233333221 13579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.69  E-value=0.028  Score=51.71  Aligned_cols=73  Identities=19%  Similarity=0.215  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+++|+|+|+ |++|.+++..+...|+ +++++.++.++.+.+. +++...+..         .....+..  ..+|+||
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---------~~~l~~~l--~~aDiVI  247 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---------LSELPQLI--KKADIII  247 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---------HHHHHHHh--ccCCEEE
Confidence            5789999999 9999999999999997 7999999988766554 455222221         12222222  4689999


Q ss_pred             eCCCccc
Q 019049          227 DPVGGKL  233 (347)
Q Consensus       227 d~~g~~~  233 (347)
                      +|++.+.
T Consensus       248 ~aT~a~~  254 (414)
T PRK13940        248 AAVNVLE  254 (414)
T ss_pred             ECcCCCC
Confidence            9999753

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.69  E-value=0.016  Score=49.93  Aligned_cols=86  Identities=24%  Similarity=0.292  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-E--EeCCCCCc--hhhHHHHHHHhc-
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-V--VDLSNESV--IPSVKEFLKARK-  218 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v--~~~~~~~~--~~~~~~~~~~~~-  218 (347)
                      +.++..+|+|.|++.++|++.+..++..|++|+++.++..++..++ +++-.. +  +.+...+.  .++++...+.+. 
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            3455679999999999999999999999999999999999988875 344111 1  11211111  223444444332 


Q ss_pred             -CCcccEEEeCCCc
Q 019049          219 -LKGVDVLYDPVGG  231 (347)
Q Consensus       219 -~~~~d~v~d~~g~  231 (347)
                       .+.+|.+|+|+|.
T Consensus       109 ~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGV  122 (331)
T ss_pred             ccCCcceEEEecCc
Confidence             2468999999995

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.019  Score=48.82  Aligned_cols=79  Identities=23%  Similarity=0.299  Sum_probs=50.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c-CCc-EEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L-GVD-HVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~-g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      ++++|.|++|++|...++.+...|++|+++++++++.+...+    . +.. .++..+-.+. +..++...... ..+|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~-~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT-ASHAAFLDSLP-ALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh-HHHHHHHHHHh-hcCCE
Confidence            589999999999999999998899999999998876544321    1 111 1222111111 22344443332 25699


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ++.++|.
T Consensus        80 vv~~ag~   86 (243)
T PRK07102         80 VLIAVGT   86 (243)
T ss_pred             EEECCcC
Confidence            9988763

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.68  E-value=0.027  Score=48.74  Aligned_cols=98  Identities=19%  Similarity=0.204  Sum_probs=68.1

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ..+||+....+..+....---.|++|+|.|.+..+|.-++.++...|++|+++.+...                   +  
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-------------------~--  194 (286)
T PRK14175        136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-------------------D--  194 (286)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------------h--
Confidence            3466666666655533321237899999999666999999999999999998876321                   1  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        +.+.+     ..+|++|.++|.+.+-. -++++++..++.+|...
T Consensus       195 --l~~~~-----~~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        195 --MASYL-----KDADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             --HHHHH-----hhCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence              11111     46799999999865421 15688988888887653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.67  E-value=0.009  Score=51.25  Aligned_cols=81  Identities=22%  Similarity=0.310  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHhcCCc--EEEeCCCCC-chhhHHHHHHHhcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD--HVVDLSNES-VIPSVKEFLKARKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~~~~g~~--~v~~~~~~~-~~~~~~~~~~~~~~~~  221 (347)
                      .|+.|||+|+++|+|.+.++-...+|+++.+.+.+.+-.    +.++..|..  .+.|.++.+ ...-.+++.+..  +.
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~--G~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV--GD  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc--CC
Confidence            588999999999999999988888999988888776533    333444522  333444332 222233333333  47


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++|.+|-
T Consensus       115 V~ILVNNAGI  124 (300)
T KOG1201|consen  115 VDILVNNAGI  124 (300)
T ss_pred             ceEEEecccc
Confidence            9999999883

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.67  E-value=0.02  Score=49.54  Aligned_cols=88  Identities=26%  Similarity=0.302  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcE----EEeCCCCCchhhHHHHHHHhcCC-c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDH----VVDLSNESVIPSVKEFLKARKLK-G  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~----v~~~~~~~~~~~~~~~~~~~~~~-~  221 (347)
                      ++++++|.|+ ||.+.+++..+...|+ +++++.|+.+|.+.+.+ ++...    .....+..             .. .
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~-------------~~~~  190 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLE-------------GLEE  190 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccc-------------cccc
Confidence            5799999999 9999999999999996 89999999998777653 44211    11111111             12 5


Q ss_pred             ccEEEeCCCccchH------HHHhccccCCEEEEE
Q 019049          222 VDVLYDPVGGKLTK------ESLKLLNWGAQILVI  250 (347)
Q Consensus       222 ~d~v~d~~g~~~~~------~~~~~l~~~G~~v~~  250 (347)
                      +|+++||++-....      .-.+++++.-.+.++
T Consensus       191 ~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~  225 (283)
T COG0169         191 ADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDV  225 (283)
T ss_pred             cCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEe
Confidence            89999999842111      014556666666554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.67  E-value=0.02  Score=49.47  Aligned_cols=81  Identities=20%  Similarity=0.262  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChh---hHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|+++  ++|.++++.+...|++|+++.+++.   ..+.+. +.+....+..+-.+ .+.++.+....  ..+
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhcC
Confidence            578999999975  8999999999889999998887632   222222 22322222221111 12233333322  134


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus        84 ~iD~linnAg   93 (262)
T PRK07984         84 KFDGFVHSIG   93 (262)
T ss_pred             CCCEEEECCc
Confidence            6899999987

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.67  E-value=0.019  Score=48.81  Aligned_cols=80  Identities=30%  Similarity=0.434  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHH----HHhcCCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKF----LKSLGVDH-VV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~----~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|++|++|..++..+...|++|+++.++..+ .+.    ++..+... .+  |..+.+   .+.+..+..  .
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~   80 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE---SVERAVDEAKAE   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH---HHHHHHHHHHHH
Confidence            45799999999999999999999999999877776542 221    22233222 22  222221   233333221  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      ..++|.++.++|.
T Consensus        81 ~~~id~vi~~ag~   93 (248)
T PRK05557         81 FGGVDILVNNAGI   93 (248)
T ss_pred             cCCCCEEEECCCc
Confidence            2468999998874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.66  E-value=0.025  Score=49.32  Aligned_cols=91  Identities=25%  Similarity=0.361  Sum_probs=60.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+++++|.|+ |++|.+++..+...| .+|+++.++.++.+.+. +++....+.. ..+.    .     ..-..+|+|+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~-----~~~~~~DivI  190 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----Q-----EELADFDLII  190 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----h-----hccccCCEEE
Confidence            5679999999 999999999999999 59999999998876664 3432110111 0010    0     0124689999


Q ss_pred             eCCCccch------HHHHhccccCCEEEEE
Q 019049          227 DPVGGKLT------KESLKLLNWGAQILVI  250 (347)
Q Consensus       227 d~~g~~~~------~~~~~~l~~~G~~v~~  250 (347)
                      +|++....      ......+++...++++
T Consensus       191 naTp~g~~~~~~~~~~~~~~l~~~~~v~Di  220 (278)
T PRK00258        191 NATSAGMSGELPLPPLPLSLLRPGTIVYDM  220 (278)
T ss_pred             ECCcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence            99985332      1234566776666665

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.66  E-value=0.0075  Score=53.22  Aligned_cols=82  Identities=28%  Similarity=0.366  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cC----CcEEE-eCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG----VDHVV-DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g----~~~v~-~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+.+++|+|+++|+|..++..+...|++|+.++++.++.+.+++ +.    ...+. -.-+..-.+++..+.+..  ...
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            56799999999999999999999999999999999877665532 22    11111 111222222233333322  356


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      ..|+.++.+|
T Consensus       114 ~ldvLInNAG  123 (314)
T KOG1208|consen  114 PLDVLINNAG  123 (314)
T ss_pred             CccEEEeCcc
Confidence            7899999888

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.66  E-value=0.017  Score=49.34  Aligned_cols=83  Identities=24%  Similarity=0.294  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      ++++++|.|++|++|..++..+...|++|++. .++.++.+.+    ++.+....+-.-+..-.+.+....+..  ..+.
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999998764 5555544332    334433222111111112233332221  1246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++.++|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.65  E-value=0.023  Score=50.51  Aligned_cols=79  Identities=24%  Similarity=0.318  Sum_probs=52.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH-hcC---Cc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLG---VD-HV--VDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~-~~g---~~-~v--~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      +++++|.|+++++|..+++.+...| ++|++++++.++.+.+. +++   .. .+  .|..+.   +.++......  ..
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSL---DSVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCH---HHHHHHHHHHHHhC
Confidence            5689999999999999999888899 89999999887665443 332   11 11  233222   1233333322  13


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        80 ~~iD~lI~nAG~   91 (314)
T TIGR01289        80 RPLDALVCNAAV   91 (314)
T ss_pred             CCCCEEEECCCc
Confidence            478999998873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.65  E-value=0.0089  Score=49.50  Aligned_cols=107  Identities=20%  Similarity=0.274  Sum_probs=67.3

Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHH----HhcCCcEE-EeCCCC
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFL----KSLGVDHV-VDLSNE  204 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~----~~~g~~~v-~~~~~~  204 (347)
                      .+...|.  +.+...+++|++||-+|+  +.|+.++-+++..|.  +|+.++..++-.+.+    +++|...+ +...+.
T Consensus        57 ~P~~~a~--~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg  132 (209)
T PF01135_consen   57 APSMVAR--MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG  132 (209)
T ss_dssp             -HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G
T ss_pred             HHHHHHH--HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch
Confidence            3444444  236777999999999996  568888888888775  699999888744444    34564422 111111


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEE
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~  250 (347)
                      ..        .......||.|+-+.+-+.. ...++.|+++|+++..
T Consensus       133 ~~--------g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  133 SE--------GWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             GG--------TTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             hh--------ccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            10        00123579999988876555 5678999999999985

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.013  Score=49.37  Aligned_cols=75  Identities=27%  Similarity=0.323  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHH-HhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLK-ARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~-~~~~~~~d~v~  226 (347)
                      .+++++|.|++|++|...++.+...|++|+++.++.++     .... ....|..+...   .+...+ .....++|+++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~d~vi   73 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQ---TAATLAQINEIHPVDAIV   73 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHH---HHHHHHHHHHhCCCcEEE
Confidence            36789999999999999999999999999999987654     1111 12223333221   222222 22223689999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      .+.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98874

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.64  E-value=0.019  Score=52.70  Aligned_cols=75  Identities=21%  Similarity=0.291  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC-cEEE--eCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV-DHVV--DLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~-~~v~--~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .+++++|.||+|++|.+.+..+...|++|+++++++++.+... ..+. ...+  |..+      .+.+.+..  +++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd------~~~v~~~l--~~IDi  248 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ------EAALAELL--EKVDI  248 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC------HHHHHHHh--CCCCE
Confidence            4789999999999999999988889999999998876553321 1111 1122  2222      22233322  46999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus       249 LInnAGi  255 (406)
T PRK07424        249 LIINHGI  255 (406)
T ss_pred             EEECCCc
Confidence            9998773

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.64  E-value=0.012  Score=52.20  Aligned_cols=89  Identities=25%  Similarity=0.277  Sum_probs=62.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+|.|+|+ |.+|...+..++..|.  +|++.++++++.+.+++.|......   .+    ..+..     ...|+|+.|
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~----~~~~~-----~~aDvViia   73 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS----AAEAV-----KGADLVILC   73 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC----HHHHh-----cCCCEEEEC
Confidence            58999998 9999999999888884  8999999998888888877532111   11    11111     368999999


Q ss_pred             CCccch----HHHHhccccCCEEEEEee
Q 019049          229 VGGKLT----KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~~~~----~~~~~~l~~~G~~v~~g~  252 (347)
                      ++....    ......++++..++.++.
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            986433    334456677776666543

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.013  Score=50.45  Aligned_cols=76  Identities=32%  Similarity=0.476  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||.|++|++|...++.+...|++|++++++..+.  . ..... ...|..+.+   ..+.+....  ..+++|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~-~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L-PEGVEFVAADLTTAE---GCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c-CCceeEEecCCCCHH---HHHHHHHHHHHHcCCCCEE
Confidence            478999999999999999999988999999999876531  1 11111 112333222   122222211  12468999


Q ss_pred             EeCCC
Q 019049          226 YDPVG  230 (347)
Q Consensus       226 ~d~~g  230 (347)
                      ++++|
T Consensus        82 i~~ag   86 (260)
T PRK06523         82 VHVLG   86 (260)
T ss_pred             EECCc
Confidence            99987

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.63  E-value=0.035  Score=50.05  Aligned_cols=83  Identities=22%  Similarity=0.237  Sum_probs=51.0

Q ss_pred             CCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEecChh--h--------------HHHHHhcCCc-EEEeCCCCCchh
Q 019049          148 SSGQVLLVLGAAGGVGVA--AVQIGKVCGATIIAVARGAE--K--------------IKFLKSLGVD-HVVDLSNESVIP  208 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~--~~~la~~~g~~V~~~~~~~~--~--------------~~~~~~~g~~-~v~~~~~~~~~~  208 (347)
                      ..++++||.|+++++|++  .++.+ ..|++++++....+  +              .+.+++.|.. ..+..+-.+ .+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-DE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-HH
Confidence            456899999999999999  56677 88999888874221  1              2234455643 223322222 12


Q ss_pred             hHHHHHHHh--cCCcccEEEeCCCcc
Q 019049          209 SVKEFLKAR--KLKGVDVLYDPVGGK  232 (347)
Q Consensus       209 ~~~~~~~~~--~~~~~d~v~d~~g~~  232 (347)
                      ..+++.+..  ..+++|+++++++.+
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            233333322  135799999999864

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.02  Score=50.30  Aligned_cols=36  Identities=31%  Similarity=0.388  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .++++||.|++|++|..++..+...|++|+++.++.
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~   80 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE   80 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            478999999999999999998888999999988764

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.62  E-value=0.022  Score=49.54  Aligned_cols=82  Identities=18%  Similarity=0.278  Sum_probs=51.9

Q ss_pred             CCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh---hhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          148 SSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       148 ~~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~---~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      -.++++||.|++  +++|.+.++.+...|++|+++.+++   ++.+.+ ++++....+..+-.+ .++.+++.+..  ..
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHHhc
Confidence            357899999996  7999999999999999999887653   233333 344532222222111 22234433322  23


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +.+|++++++|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            47899999886

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.62  E-value=0.02  Score=49.32  Aligned_cols=81  Identities=21%  Similarity=0.276  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----H-hcCCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----K-SLGVD-HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|.|+++++|..++..+...|++|+++.+ +.++.+..    + +.+.. ..+..+-.+. +++++.....  ..
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP-ETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhc
Confidence            5789999999999999999999999999988764 34433322    1 12322 2222221111 2233333322  12


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +.+|++++++|
T Consensus        86 g~id~lv~nAg   96 (260)
T PRK08416         86 DRVDFFISNAI   96 (260)
T ss_pred             CCccEEEECcc
Confidence            47899999885

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.022  Score=48.86  Aligned_cols=81  Identities=27%  Similarity=0.294  Sum_probs=51.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC--CcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG--VDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g--~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +++++|+|++|++|...+..+...|++|++++++.++.+.+. ++.  ....+..+-.+. +++.......  ..+++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDA-ASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            568999999999999999988889999999999887665443 222  112222221111 1122222211  1246899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (257)
T PRK07074         81 LVANAGA   87 (257)
T ss_pred             EEECCCC
Confidence            9999874

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.59  E-value=0.032  Score=46.25  Aligned_cols=97  Identities=15%  Similarity=0.177  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcCCc---EEEeCCCCCchhhHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVD---HVVDLSNESVIPSVKEF  213 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~~  213 (347)
                      +...++++++||-.|+  |.|..++.+++..+  .+|++++.+++-.+.++    +.|..   .++..+....   .   
T Consensus        66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~---  137 (205)
T PRK13944         66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L---  137 (205)
T ss_pred             HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C---
Confidence            5667889999999997  45777777787764  58999999988665554    34432   2222221111   0   


Q ss_pred             HHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEE
Q 019049          214 LKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  250 (347)
                         .....||.|+-+.... ..+.+.+.|+++|+++..
T Consensus       138 ---~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        138 ---EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ---ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence               1125799998776543 346788999999999764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.58  E-value=0.026  Score=48.29  Aligned_cols=79  Identities=25%  Similarity=0.422  Sum_probs=51.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcE-E--EeCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-V--VDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ++++||.|++|++|..++..+...|++|++++++.++.+.+..    .+... .  .|..+.+   .++......  ...
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKED---EIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH---HHHHHHHHHHHhcC
Confidence            3589999999999999999988899999999998876655432    23221 1  2333221   122222211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      +.|++|.+.+.
T Consensus        78 ~~d~vi~~a~~   88 (255)
T TIGR01963        78 GLDILVNNAGI   88 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999988763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.02  Score=48.04  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=50.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ++++|.|++|.+|..++..+... ++|++++++.++.+.+.+ .....++..+-.+. +.+++.....  .+.|.++.++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~vi~~a   79 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP-EAIAAAVEQL--GRLDVLVHNA   79 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH-HHHHHHHHhc--CCCCEEEECC
Confidence            58999999999999998877766 999999998877655543 22122222222221 2233333322  3699999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      |.
T Consensus        80 g~   81 (227)
T PRK08219         80 GV   81 (227)
T ss_pred             Cc
Confidence            74

>PRK06398 aldose dehydrogenase; Validated

Probab=96.58  E-value=0.013  Score=50.52  Aligned_cols=75  Identities=28%  Similarity=0.350  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|..++..+...|++|++++++..+..     ... ...|..+..   ++++..+..  ..+.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~---~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKE---QVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHH---HHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999998765321     111 112333322   123332221  12468999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998873

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.57  E-value=0.02  Score=48.71  Aligned_cols=82  Identities=26%  Similarity=0.359  Sum_probs=50.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      ++++||.|++|++|..++..+...|++|+++ .++.++.+.+.    ..+....+...+..-.+.++......  ..+++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999998888889999998 88776554332    22222111111111112233333221  12368


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.54  E-value=0.024  Score=48.58  Aligned_cols=78  Identities=21%  Similarity=0.201  Sum_probs=51.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc--CCcEE-EeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL--GVDHV-VDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~--g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      ..+.+|+|+|++|.+|..+++.+...|++|+++.+++++.......  ++..+ .|..+.     ...+.+.. +.++|+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~l~~~~-~~~~d~   88 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG-----SDKLVEAI-GDDSDA   88 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC-----HHHHHHHh-hcCCCE
Confidence            3467999999999999999988888899999999988765433221  22211 233321     12222322 136899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +|.+.|.
T Consensus        89 vi~~~g~   95 (251)
T PLN00141         89 VICATGF   95 (251)
T ss_pred             EEECCCC
Confidence            9988774

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.52  E-value=0.016  Score=49.39  Aligned_cols=83  Identities=27%  Similarity=0.358  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhH-HHH---HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKI-KFL---KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~-~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|+|++|++|..+++.+...|++|++... +..+. +.+   +..+.......-+..-.+.+.+.....  ..++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999887543 22222 222   334543322111111111122222211  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.52  E-value=0.17  Score=44.98  Aligned_cols=143  Identities=9%  Similarity=0.034  Sum_probs=77.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----------cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----------LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----------~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      -++|.|+|+ |.+|...++.+...|.+|++.+.+++..+.++.           .|...-.....-.+....+   +.  
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~---~a--   80 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIE---AC--   80 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHH---HH--
Confidence            468999999 999999999999999999999999876544321           2210000000000100011   11  


Q ss_pred             CCcccEEEeCCCcc------chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc-------
Q 019049          219 LKGVDVLYDPVGGK------LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP-------  285 (347)
Q Consensus       219 ~~~~d~v~d~~g~~------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  285 (347)
                      -.++|+|++++...      .+..+-+.++++. ++..  .++............+.-.+.+.++.+..+.-|       
T Consensus        81 v~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a-IlaS--nTS~l~~s~la~~~~~p~R~~g~HffnP~~~~pLVEVv~g  157 (321)
T PRK07066         81 VADADFIQESAPEREALKLELHERISRAAKPDA-IIAS--STSGLLPTDFYARATHPERCVVGHPFNPVYLLPLVEVLGG  157 (321)
T ss_pred             hcCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe-EEEE--CCCccCHHHHHHhcCCcccEEEEecCCccccCceEEEeCC
Confidence            15789999999863      3444556666654 3332  222221111122223345566666655443222       


Q ss_pred             -hhHHHHHHHHHHHHHc
Q 019049          286 -HVLEDSLRELLLWAAK  301 (347)
Q Consensus       286 -~~~~~~~~~~~~~l~~  301 (347)
                       ....+.++.+.+++.+
T Consensus       158 ~~T~~e~~~~~~~f~~~  174 (321)
T PRK07066        158 ERTAPEAVDAAMGIYRA  174 (321)
T ss_pred             CCCCHHHHHHHHHHHHH
Confidence             1224666666666655

>TIGR02415 23BDH acetoin reductases

Probab=96.50  E-value=0.036  Score=47.40  Aligned_cols=78  Identities=24%  Similarity=0.296  Sum_probs=50.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHHh--cCCc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      ++++|.|++|++|...++.+...|++|+++.++.++.+.+    ...+... .+  |..+.+   .+.+.....  ....
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~---~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD---QVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH---HHHHHHHHHHHHcCC
Confidence            4799999999999999999999999999999887654433    2234221 12  222222   233332221  1236


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+++.++|.
T Consensus        78 id~vi~~ag~   87 (254)
T TIGR02415        78 FDVMVNNAGV   87 (254)
T ss_pred             CCEEEECCCc
Confidence            8999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.50  E-value=0.03  Score=48.05  Aligned_cols=80  Identities=29%  Similarity=0.350  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .+++++|.|++|++|..+++.+...|++|+++.++. +..+.++..+... ..|..+..   .+++.....  ..+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRD---QVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999998876543 3334444334321 12333322   133333221  1247899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ++.++|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999874

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.49  E-value=0.028  Score=47.61  Aligned_cols=107  Identities=16%  Similarity=0.219  Sum_probs=67.3

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....++.+.++||-.|.  +.|..++.+++.+  +.+|+.++.+++..+.+++    .|...-+.....+..+....+..
T Consensus        61 ~~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~  138 (234)
T PLN02781         61 SMLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLN  138 (234)
T ss_pred             HHHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHh
Confidence            34667778889999986  5566666677665  3599999999987776643    45432223233333111222211


Q ss_pred             HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      ......||+||--...    ..+..++++++++|.++.-
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            1113579999855432    3567889999999988763

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=96.48  E-value=0.15  Score=42.09  Aligned_cols=79  Identities=22%  Similarity=0.365  Sum_probs=53.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC----cEE-E-eCC---CCCchhhHHHHHHHhcCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV----DHV-V-DLS---NESVIPSVKEFLKARKLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~----~~v-~-~~~---~~~~~~~~~~~~~~~~~~  220 (347)
                      |+++++.|+.|++|+.....+-..|+++.++..+.|+.+...++.+    ..+ + .++   ..+..+..+++...  -+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~--fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT--FG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH--hC
Confidence            8899999999999999999999999999999988887766655442    111 1 111   11222222333322  35


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      ..|+.+|-+|
T Consensus        83 ~iDIlINgAG   92 (261)
T KOG4169|consen   83 TIDILINGAG   92 (261)
T ss_pred             ceEEEEcccc
Confidence            6899999888

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.46  E-value=0.069  Score=44.48  Aligned_cols=101  Identities=21%  Similarity=0.284  Sum_probs=61.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE---------eCCCCCchhhHHHHHHHh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV---------DLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~---------~~~~~~~~~~~~~~~~~~  217 (347)
                      .++.+||+.|+  |.|.-++-+|. .|.+|++++.++.-.+.+. +.|.....         .....++  ....+....
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~D~~~~~  107 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEI--FCGDFFALT  107 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEE--EEccCCCCC
Confidence            57779999998  46777777764 7999999999999777653 33321000         0000000  000011111


Q ss_pred             --cCCcccEEEeCCCc---------cchHHHHhccccCCEEEEEeec
Q 019049          218 --KLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       218 --~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                        ....||.++|+..-         ..+..+.++|+|+|+++++...
T Consensus       108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~  154 (213)
T TIGR03840       108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD  154 (213)
T ss_pred             cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence              12468999997541         2456788999999987777543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.46  E-value=0.019  Score=49.50  Aligned_cols=80  Identities=20%  Similarity=0.366  Sum_probs=50.1

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecC---hhhHHHH-HhcCCcEEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARG---AEKIKFL-KSLGVDHVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~---~~~~~~~-~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|+  ++++|.++++.+...|++|+++.+.   .++.+.+ ++++....+  |..+.+   +++...+..  .
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~---~v~~~~~~~~~~   81 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE---QIDALFASLGQH   81 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH---HHHHHHHHHHHH
Confidence            4789999996  5799999999998899999887543   3333333 334532222  333222   233333322  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|++++++|.
T Consensus        82 ~g~iD~lvnnAG~   94 (260)
T PRK06997         82 WDGLDGLVHSIGF   94 (260)
T ss_pred             hCCCcEEEEcccc
Confidence            2579999998863

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.047  Score=47.50  Aligned_cols=78  Identities=18%  Similarity=0.238  Sum_probs=56.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.|++|+|.|.++.+|...+.++...|++|++..+....                       +.   +.+  ..+|++++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~-----------------------L~---~~~--~~aDIvI~  208 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQN-----------------------LP---ELV--KQADIIVG  208 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchh-----------------------HH---HHh--ccCCEEEE
Confidence            478899999995559999999999999988877652111                       11   111  47899999


Q ss_pred             CCCccchHHHHhccccCCEEEEEeecC
Q 019049          228 PVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      ++|.+.+ --.++++++-.++.++...
T Consensus       209 AtG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        209 AVGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             ccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            9986543 2236789998998888553

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.42  E-value=0.062  Score=40.15  Aligned_cols=98  Identities=21%  Similarity=0.415  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH----hcCCc--EEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK----SLGVD--HVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++++|+-.|+ |. |..+..+++..+ .+|++++.++...+.++    .++..  .++..+....       ..
T Consensus        13 ~~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------~~   83 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA-------LE   83 (124)
T ss_pred             HHcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc-------Ch
Confidence            4556777889999998 44 888999998874 59999999988777664    24432  2222111110       00


Q ss_pred             HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      . ....+|+|+...+.    ..++.+.+.|+++|+++..
T Consensus        84 ~-~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        84 D-SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             h-hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            0 12479999876543    2467889999999999874

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.42  E-value=0.047  Score=42.86  Aligned_cols=92  Identities=26%  Similarity=0.324  Sum_probs=60.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      ..+.+++|.|+ |.+|...++.+...| .+|++.+++.++.+.+ ++++... .....  +.    .+.     -.++|+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~~----~~~-----~~~~Dv   84 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--DL----EEL-----LAEADL   84 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--ch----hhc-----cccCCE
Confidence            45689999999 999999999988886 6899999988876654 4455321 01111  11    111     257899


Q ss_pred             EEeCCCccch-----HHHHhccccCCEEEEEe
Q 019049          225 LYDPVGGKLT-----KESLKLLNWGAQILVIG  251 (347)
Q Consensus       225 v~d~~g~~~~-----~~~~~~l~~~G~~v~~g  251 (347)
                      ++.|++....     ......++++..++.++
T Consensus        85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~  116 (155)
T cd01065          85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVV  116 (155)
T ss_pred             EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            9999987442     11223456666666664

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK05855 short chain dehydrogenase; Validated

Probab=96.40  E-value=0.03  Score=54.19  Aligned_cols=80  Identities=21%  Similarity=0.290  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.    +.|.. .++  |..+.+   +.+++....  ..
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~---~~~~~~~~~~~~~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD---AMEAFAEWVRAEH  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH---HHHHHHHHHHHhc
Confidence            4579999999999999999999999999999999887665442    23432 122  222222   233333321  13


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++++++|.
T Consensus       391 g~id~lv~~Ag~  402 (582)
T PRK05855        391 GVPDIVVNNAGI  402 (582)
T ss_pred             CCCcEEEECCcc
Confidence            468999999884

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.40  E-value=0.021  Score=48.75  Aligned_cols=43  Identities=35%  Similarity=0.496  Sum_probs=37.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      ..++++++|.|++|++|...++.+...|++|++++++.++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~   51 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEA   51 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHH
Confidence            4478899999999999999998888889999999998775433

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.39  E-value=0.022  Score=51.43  Aligned_cols=76  Identities=17%  Similarity=0.127  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcC--Cc-EEE--eCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG--VD-HVV--DLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g--~~-~v~--~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      .+++|||.|++|.+|..+++.+...|++|++++++....... ..++  .. ..+  |..+      .+.+.......++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~------~~~~~~~~~~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD------AAKLRKAIAEFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC------HHHHHHHHhhcCC
Confidence            467999999999999999999999999999998766543222 1221  11 111  2222      2223333333368


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |+|+.+++
T Consensus        77 d~vih~A~   84 (349)
T TIGR02622        77 EIVFHLAA   84 (349)
T ss_pred             CEEEECCc
Confidence            99999987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03139 formate dehydrogenase; Provisional

Probab=96.38  E-value=0.051  Score=49.40  Aligned_cols=88  Identities=20%  Similarity=0.211  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++.+|.+|++.+++....+..++.|+..+     .+    .+++.     ...|+|+.+
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell-----~~sDvV~l~  262 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----ED----LDAML-----PKCDVVVIN  262 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CC----HHHHH-----hhCCEEEEe
Confidence            5789999999 999999999999999999999887544444445554321     11    33333     346999888


Q ss_pred             CCc-c----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-K----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-~----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.. +    .+ ...+..|+++..++.++
T Consensus       263 lPlt~~T~~li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        263 TPLTEKTRGMFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             CCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence            774 1    22 46789999999888765

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.38  E-value=0.036  Score=47.31  Aligned_cols=104  Identities=25%  Similarity=0.325  Sum_probs=62.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhH----HHHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKI----KFLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~----~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||.|++|++|...++.+...|++|+.+.++. ++.    ..+++.+.. ..+  |..+.+   .+....+..  .
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~   81 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE---GCETLAKATIDR   81 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH---HHHHHHHHHHHH
Confidence            367999999999999999998889999988776532 222    222334432 122  222221   122222211  1


Q ss_pred             CCcccEEEeCCCc----c----c------------------hHHHHhccccCCEEEEEeecCC
Q 019049          219 LKGVDVLYDPVGG----K----L------------------TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       219 ~~~~d~v~d~~g~----~----~------------------~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      ..++|.+|.++|.    +    .                  .+.+...++..|+++.++....
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            2478999999873    0    0                  1223445567789999876543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.38  E-value=0.046  Score=47.73  Aligned_cols=42  Identities=24%  Similarity=0.291  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      .+++|+|.|+ |+.|.+++..+...|+ +|++++++.+|.+.+.
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            5679999999 9999999999999998 8999999988876654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.38  E-value=0.034  Score=47.49  Aligned_cols=75  Identities=27%  Similarity=0.336  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      +++++||.|++|++|...+..+...|++|++++++.     ....+.. ..+  |..+.   +..++..+..  ..+.+|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~id   78 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDA---AAVAQVCQRLLAETGPLD   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCH---HHHHHHHHHHHHHcCCCC
Confidence            568999999999999999999989999999999875     2222211 112  22222   2233333221  124689


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      +++.+.|.
T Consensus        79 ~vi~~ag~   86 (252)
T PRK08220         79 VLVNAAGI   86 (252)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.37  E-value=0.047  Score=45.50  Aligned_cols=91  Identities=13%  Similarity=0.110  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++.+|||+|| |.++.-=+..+...|++|++++..-. ....+...|.-...   ...+.   ...     -.++++||-
T Consensus        24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~---~r~~~---~~d-----l~g~~LVia   91 (223)
T PRK05562         24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLI---KGNYD---KEF-----IKDKHLIVI   91 (223)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEE---eCCCC---hHH-----hCCCcEEEE
Confidence            5779999999 99998878888889999999986542 23223333322222   22231   111     147899999


Q ss_pred             CCCccchHH-HHhccccCCEEEEEe
Q 019049          228 PVGGKLTKE-SLKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~~~~~~-~~~~l~~~G~~v~~g  251 (347)
                      |++++.++. +....+..|.++.+.
T Consensus        92 ATdD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         92 ATDDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             CCCCHHHHHHHHHHHHHcCCeEEEc
Confidence            999876654 455555657666654

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.03  Score=47.65  Aligned_cols=35  Identities=26%  Similarity=0.340  Sum_probs=31.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      +++|.|++|++|..+++.+...|++|++++++.++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~   37 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP   37 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence            79999999999999999988899999999887653

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.37  E-value=0.041  Score=44.54  Aligned_cols=38  Identities=21%  Similarity=0.295  Sum_probs=32.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      +|.|+|+ |.+|...++++...|++|...+.+++.++.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            5899999 9999999999998999999999999876555

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.36  E-value=0.03  Score=47.94  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=48.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHH----HHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~----~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ++++|.|++|++|..++..+...|++|++++++.. +.+    .++..+.. .++  |..+..   ....+.+..  ..+
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~   79 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLS---AHEAMLDAAQAAWG   79 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHH---HHHHHHHHHHHhcC
Confidence            57999999999999999999999999999987543 221    12223322 122  333221   123333222  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|+++.+.|.
T Consensus        80 ~id~vi~~ag~   90 (256)
T PRK12745         80 RIDCLVNNAGV   90 (256)
T ss_pred             CCCEEEECCcc
Confidence            68999999874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.34  E-value=0.024  Score=45.03  Aligned_cols=86  Identities=22%  Similarity=0.190  Sum_probs=57.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|.++|. |.+|...++-+...|++|++.++++++.+.+.+.|+...-     +    ..+..+     ..|+|+-|+.
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~-----s----~~e~~~-----~~dvvi~~v~   66 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVAD-----S----PAEAAE-----QADVVILCVP   66 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEES-----S----HHHHHH-----HBSEEEE-SS
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhh-----h----hhhHhh-----cccceEeecc
Confidence            37889999 9999999999999999999999999999988888843321     1    233332     3488888877


Q ss_pred             c-cchHH------HHhccccCCEEEEEe
Q 019049          231 G-KLTKE------SLKLLNWGAQILVIG  251 (347)
Q Consensus       231 ~-~~~~~------~~~~l~~~G~~v~~g  251 (347)
                      + +....      ++..++++..++.++
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g~iiid~s   94 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPGKIIIDMS   94 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred             cchhhhhhhhhhHHhhccccceEEEecC
Confidence            6 32222      445566666776654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.053  Score=46.38  Aligned_cols=39  Identities=31%  Similarity=0.354  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKI  187 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~  187 (347)
                      .+++++|.|++|++|..+++.+...|++|++. .++.++.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~   44 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA   44 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            35799999999999999999998899998775 5665544

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.34  E-value=0.061  Score=45.28  Aligned_cols=103  Identities=20%  Similarity=0.305  Sum_probs=70.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh----cCCcE--EEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDH--VVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~~~  215 (347)
                      ...+..+|++||=+|+  |.|-.+..+++..|- +|++++.+++-++.+++    .|...  .+..+...+       - 
T Consensus        45 ~~~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~L-------P-  114 (238)
T COG2226          45 SLLGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENL-------P-  114 (238)
T ss_pred             HhhCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhC-------C-
Confidence            4455668999988775  678888999988874 89999999997777754    23221  111111111       0 


Q ss_pred             HhcCCcccEEEeCCCc-------cchHHHHhccccCCEEEEEeecCCC
Q 019049          216 ARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                       .....||++..+.|=       ..++++.+.|+|+|+++.+......
T Consensus       115 -f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~  161 (238)
T COG2226         115 -FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD  161 (238)
T ss_pred             -CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence             234578988777662       3578899999999999998766543

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.34  E-value=0.023  Score=49.64  Aligned_cols=86  Identities=17%  Similarity=0.155  Sum_probs=58.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|.|+|. |.+|...+..++..|.+|++.++++++.+.+.+.|......   .+    .+ .     -...|+||.|+..
T Consensus         2 ~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~---~~----~~-~-----~~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEAS---TD----LS-L-----LKDCDLVILALPI   67 (279)
T ss_pred             eEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccccc---CC----Hh-H-----hcCCCEEEEcCCH
Confidence            6889998 99999998888888999999999998888888877422111   11    11 1     1467999999886


Q ss_pred             cch----HHHHhccccCCEEEEEe
Q 019049          232 KLT----KESLKLLNWGAQILVIG  251 (347)
Q Consensus       232 ~~~----~~~~~~l~~~G~~v~~g  251 (347)
                      ...    ..+...++++-.+..++
T Consensus        68 ~~~~~~~~~l~~~l~~~~ii~d~~   91 (279)
T PRK07417         68 GLLLPPSEQLIPALPPEAIVTDVG   91 (279)
T ss_pred             HHHHHHHHHHHHhCCCCcEEEeCc
Confidence            433    33444555554454443

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.32  E-value=0.035  Score=50.97  Aligned_cols=106  Identities=25%  Similarity=0.287  Sum_probs=64.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH-------HHHhc-CCcEE-EeCCCCCchhhHHHHHH
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-------FLKSL-GVDHV-VDLSNESVIPSVKEFLK  215 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~-------~~~~~-g~~~v-~~~~~~~~~~~~~~~~~  215 (347)
                      .+...+.+|||.|++|.+|..+++.+...|++|++++++..+.+       ..... +...+ .|..+.+.   +....+
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~---l~~~~~  131 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADS---LRKVLF  131 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHH---HHHHHH
Confidence            34456779999999999999999999889999999998765321       11112 22222 23333221   333333


Q ss_pred             HhcCCcccEEEeCCCccc-------------hHHHHhccccC--CEEEEEeecC
Q 019049          216 ARKLKGVDVLYDPVGGKL-------------TKESLKLLNWG--AQILVIGFAS  254 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~~-------------~~~~~~~l~~~--G~~v~~g~~~  254 (347)
                      .. +.++|+||+|.+...             ...+++.++..  +++|.++...
T Consensus       132 ~~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~  184 (390)
T PLN02657        132 SE-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC  184 (390)
T ss_pred             Hh-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence            21 126999999886410             12344444443  4788876543

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.31  E-value=0.05  Score=46.28  Aligned_cols=105  Identities=15%  Similarity=0.235  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ...+..+.++||-+|.  .+|+.++.+++.+  +.+|+.++.+++..+.++    +.|...-+.....+..+.+.++...
T Consensus        73 ~l~~~~~ak~iLEiGT--~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~  150 (247)
T PLN02589         73 MLLKLINAKNTMEIGV--YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIED  150 (247)
T ss_pred             HHHHHhCCCEEEEEeC--hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhc
Confidence            4556667789999985  7788888888876  569999999998766663    4564333444444442222222211


Q ss_pred             h-cCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049          217 R-KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       217 ~-~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  249 (347)
                      . ..+.||.||--+..    ..+..++++++++|.++.
T Consensus       151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             cccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence            1 12579999854443    356788999999999875

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.30  E-value=0.043  Score=46.71  Aligned_cols=82  Identities=23%  Similarity=0.311  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|.|++|++|..++..+...|++|+++.+ ++++.+..    +..+... .+..+-.+ .+.+....+..  ..+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4689999999999999999988889999887654 33433322    2233222 22222111 11222222221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|+++.++|.
T Consensus        84 ~id~vi~~ag~   94 (247)
T PRK12935         84 KVDILVNNAGI   94 (247)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.29  E-value=0.033  Score=46.85  Aligned_cols=80  Identities=20%  Similarity=0.339  Sum_probs=61.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh--cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~--~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++|.|+ |.+|...++.+...|..|++++.++++.+...+  +.. +++..+..     -...++..+-..+|+++-++
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t-----~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDAT-----DEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCC-----CHHHHHhcCCCcCCEEEEee
Confidence            6899999 999999999999999999999999998877433  443 34433332     24566667778999999999


Q ss_pred             CccchHHHH
Q 019049          230 GGKLTKESL  238 (347)
Q Consensus       230 g~~~~~~~~  238 (347)
                      |....+..+
T Consensus        75 ~~d~~N~i~   83 (225)
T COG0569          75 GNDEVNSVL   83 (225)
T ss_pred             CCCHHHHHH
Confidence            986554433

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.28  E-value=0.047  Score=47.00  Aligned_cols=80  Identities=23%  Similarity=0.312  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHH----HHhcCCc-EE--EeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKF----LKSLGVD-HV--VDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~----~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|.|++|++|..+++.+...|++|+++.++.. ..+.    ++..+.. ..  .|..+..   ++.+..+..  .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~---~i~~~~~~~~~~   82 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVES---DVVNLIQTAVKE   82 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHH---HHHHHHHHHHHH
Confidence            5789999999999999999999999999988877432 2222    2223422 11  2333222   133332211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|+++.++|.
T Consensus        83 ~g~id~lv~~ag~   95 (261)
T PRK08936         83 FGTLDVMINNAGI   95 (261)
T ss_pred             cCCCCEEEECCCC
Confidence            2468999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.047  Score=46.91  Aligned_cols=80  Identities=21%  Similarity=0.268  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||.|++|++|..+++.+...|++|+++.+. .++.+.+    +..+.. ..+  |..+..   .+.+.....  .
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~~~   84 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEA---EVRALVARASAA   84 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH---HHHHHHHHHHHH
Confidence            46799999999999999999998999999887654 3333322    222432 122  322221   233333221  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|+++.++|.
T Consensus        85 ~~~iD~vi~~ag~   97 (258)
T PRK09134         85 LGPITLLVNNASL   97 (258)
T ss_pred             cCCCCEEEECCcC
Confidence            2478999999873

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.26  E-value=0.059  Score=45.98  Aligned_cols=81  Identities=19%  Similarity=0.197  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH-HhcCCc-EEE--eCCCCCc-hhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KSLGVD-HVV--DLSNESV-IPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~-~~~g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~~~  222 (347)
                      .+++++|+|++|++|..++..+...|++|+.+.+ +.++.+.+ .+++.. .++  |..+.+- ....+.+.+.. +.++
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~i   82 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF-GKPI   82 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence            3578999999999999999999999999987654 34443333 234321 122  2222111 11122222222 3348


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |+++.++|
T Consensus        83 d~li~~ag   90 (253)
T PRK08642         83 TTVVNNAL   90 (253)
T ss_pred             eEEEECCC
Confidence            99999875

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.25  E-value=0.1  Score=38.60  Aligned_cols=91  Identities=19%  Similarity=0.271  Sum_probs=63.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  232 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  232 (347)
                      |+|.|. |.+|...++.++..+.+|++++.++++.+.+++.|.. ++..+..+     ...++..+-..++.++-+++++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~-----~~~l~~a~i~~a~~vv~~~~~d   73 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATD-----PEVLERAGIEKADAVVILTDDD   73 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTS-----HHHHHHTTGGCESEEEEESSSH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchh-----hhHHhhcCccccCEEEEccCCH
Confidence            678899 9999999999999666999999999999999998854 44444332     2444555566889999888874


Q ss_pred             chH----HHHhccccCCEEEEE
Q 019049          233 LTK----ESLKLLNWGAQILVI  250 (347)
Q Consensus       233 ~~~----~~~~~l~~~G~~v~~  250 (347)
                      ...    ..++.+.+..+++..
T Consensus        74 ~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   74 EENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCeEEEE
Confidence            332    233445555666543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.04  Score=47.29  Aligned_cols=80  Identities=21%  Similarity=0.342  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHH----HHhcCCcE-EE--eCCCCCchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKF----LKSLGVDH-VV--DLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~----~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~  217 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.    ++.+.    ++..+... .+  |..+   .+.+++.....
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~   83 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT---AAAVEKLFDDA   83 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC---HHHHHHHHHHH
Confidence            467999999999999999999998999977765432    22221    22234321 12  2222   12233333321


Q ss_pred             --cCCcccEEEeCCCc
Q 019049          218 --KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 --~~~~~d~v~d~~g~  231 (347)
                        ..+++|++++++|.
T Consensus        84 ~~~~~~id~li~~ag~   99 (257)
T PRK12744         84 KAAFGRPDIAINTVGK   99 (257)
T ss_pred             HHhhCCCCEEEECCcc
Confidence              12478999999884

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.22  E-value=0.026  Score=43.74  Aligned_cols=97  Identities=20%  Similarity=0.245  Sum_probs=69.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH----HhcCCcccEEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK----ARKLKGVDVLY  226 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----~~~~~~~d~v~  226 (347)
                      .+|+|+|+-|.+|.++++..+..++-|.-++.++...  +    -..++...+.+|.++.+.+++    .+.+.++|.||
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~--A----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--A----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--c----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            4899999999999999999999999988888765422  1    113444556677666555554    45688999999


Q ss_pred             eCCCc-----c----ch------------------HHHHhccccCCEEEEEeec
Q 019049          227 DPVGG-----K----LT------------------KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       227 d~~g~-----~----~~------------------~~~~~~l~~~G~~v~~g~~  253 (347)
                      +.+|+     .    .+                  ..+-..|+++|.+.+.|..
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk  131 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK  131 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence            98774     1    00                  1123589999999988754

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.20  E-value=0.1  Score=43.52  Aligned_cols=98  Identities=21%  Similarity=0.345  Sum_probs=64.6

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHH----hcCCcE--EEeCCCCCchhhHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDH--VVDLSNESVIPSVKEF  213 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~  213 (347)
                      .....++++++||-.|+  |.|..++.+++..+.  +|++++.+++-.+.++    +.|.+.  ++..+....       
T Consensus        70 ~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~-------  140 (215)
T TIGR00080        70 TELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQG-------  140 (215)
T ss_pred             HHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccC-------
Confidence            35667899999999997  567777778877653  7999999988666654    344322  121111110       


Q ss_pred             HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049          214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  250 (347)
                        ......||+|+-+... .....+.+.|+++|+++..
T Consensus       141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             --CcccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence              0112479988855443 4456788999999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.20  E-value=0.046  Score=46.36  Aligned_cols=37  Identities=38%  Similarity=0.445  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +.++|||.|++|.+|..+++.+...|++|+++.++..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~   41 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE   41 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            3569999999999999999999999999887666544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.20  E-value=0.019  Score=41.79  Aligned_cols=86  Identities=16%  Similarity=0.244  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|||+|+ |.+|..-++.+...|++|++++...   +..+  +...   .....+.         ..-.++++|+.+
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~--~~i~---~~~~~~~---------~~l~~~~lV~~a   67 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE--GLIQ---LIRREFE---------EDLDGADLVFAA   67 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH--TSCE---EEESS-G---------GGCTTESEEEE-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh--hHHH---HHhhhHH---------HHHhhheEEEec
Confidence            5789999999 9999999999999999999999875   1122  2111   1122221         113579999999


Q ss_pred             CCccch-HHHHhccccCCEEEEEee
Q 019049          229 VGGKLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      ++++.+ ..+....+..|..+.+..
T Consensus        68 t~d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   68 TDDPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             SS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred             CCCHHHHHHHHHHHhhCCEEEEECC
Confidence            998665 456667777888887743

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.19  E-value=0.062  Score=45.48  Aligned_cols=78  Identities=32%  Similarity=0.402  Sum_probs=48.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH-Hh---cCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KS---LGVD-HVV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~-~~---~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +++||+|++|++|..+++.+...|++|+++.+ +.++.+.. .+   .+.. ..+  |..+..   .+....+..  ..+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFE---SCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHH---HHHHHHHHHHHHcC
Confidence            47899999999999999999999999998887 44433322 22   2211 122  222221   122222211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|++|.+.|.
T Consensus        78 ~id~vi~~ag~   88 (242)
T TIGR01829        78 PIDVLVNNAGI   88 (242)
T ss_pred             CCcEEEECCCC
Confidence            68999999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.19  E-value=0.033  Score=48.04  Aligned_cols=77  Identities=21%  Similarity=0.297  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .+++++|.|++|++|..+++.+...|++|++++++.++.+.   .... ...|..+.   +.+++.....  ..+.+|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~---~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSA---EEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCH---HHHHHHHHHHHHHcCCCCEE
Confidence            46799999999999999999999999999999887654321   1111 11233222   1233333221  12478999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        82 i~~Ag~   87 (266)
T PRK06171         82 VNNAGI   87 (266)
T ss_pred             EECCcc
Confidence            999873

>PRK05599 hypothetical protein; Provisional

Probab=96.18  E-value=0.048  Score=46.56  Aligned_cols=76  Identities=20%  Similarity=0.293  Sum_probs=49.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc--EEE--eCCCCCchhhHHHHHHHh--cCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD--HVV--DLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~--~v~--~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++|.|+++++|...++.+. .|++|+++.++.++.+.+    ++.|..  ..+  |..+.+-   .+.+.+..  ..++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~g~   77 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDT---HRELVKQTQELAGE   77 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHH---HHHHHHHHHHhcCC
Confidence            68999999999999988776 599999999988876544    223422  222  3333222   33332221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        78 id~lv~nag~   87 (246)
T PRK05599         78 ISLAVVAFGI   87 (246)
T ss_pred             CCEEEEecCc
Confidence            8999998874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.18  E-value=0.058  Score=46.71  Aligned_cols=69  Identities=22%  Similarity=0.202  Sum_probs=50.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      +...+++++|.|+ |+.+.+++..+...|+ +|+++.++.+|.+.+.+ ++..         +   ....    ....+|
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---------~---~~~~----~~~~~d  180 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---------W---RPDL----GGIEAD  180 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---------c---hhhc----ccccCC
Confidence            4445679999999 9999999999999998 69999999987776643 4311         1   0000    123589


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      +++||++-
T Consensus       181 lvINaTp~  188 (272)
T PRK12550        181 ILVNVTPI  188 (272)
T ss_pred             EEEECCcc
Confidence            99999873

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.17  E-value=0.048  Score=41.18  Aligned_cols=79  Identities=22%  Similarity=0.334  Sum_probs=50.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      -+|-|+|+ |.+|..+...++..|..|..+. ++.+..+.+.. ++...+.+..+  .            -..+|++|-+
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~--~------------~~~aDlv~ia   75 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE--I------------LRDADLVFIA   75 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG--G------------GCC-SEEEE-
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc--c------------cccCCEEEEE
Confidence            38999999 9999999999999999988775 44445565554 44443333211  1            1478999999


Q ss_pred             CCccchHHHHhccccC
Q 019049          229 VGGKLTKESLKLLNWG  244 (347)
Q Consensus       229 ~g~~~~~~~~~~l~~~  244 (347)
                      +.++.+....+.|...
T Consensus        76 vpDdaI~~va~~La~~   91 (127)
T PF10727_consen   76 VPDDAIAEVAEQLAQY   91 (127)
T ss_dssp             S-CCHHHHHHHHHHCC
T ss_pred             echHHHHHHHHHHHHh
Confidence            9998777666555543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.17  E-value=0.062  Score=46.13  Aligned_cols=33  Identities=27%  Similarity=0.355  Sum_probs=29.4

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEe
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVA  181 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~  181 (347)
                      .+++++|.|+++  ++|..++..+...|++|++++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            578999999974  899999999999999998875

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.16  E-value=0.052  Score=42.52  Aligned_cols=83  Identities=27%  Similarity=0.287  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHhcCCcEEEeCCCCCchhhHHHHHHH--hcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVKEFLKA--RKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~~~~d~v  225 (347)
                      +|-.-||.|+.+++|.+++..+...|+.|...+...++ .+.++++|-..++...+..-.+.+...+..  ...+..|..
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            45567999999999999999999999999999876665 466789998888866555443334433332  234578999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++|.|.
T Consensus        88 vncagi   93 (260)
T KOG1199|consen   88 VNCAGI   93 (260)
T ss_pred             eeccce
Confidence            999995

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.046  Score=53.97  Aligned_cols=79  Identities=32%  Similarity=0.428  Sum_probs=53.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +++++|.|++|++|..++..+...|++|+++++++++.+.+.    ..+... ++  |..+.   +..++..+..  ..+
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~~~~~~~~~~~~~g  447 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDS---AAVDHTVKDILAEHG  447 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCH---HHHHHHHHHHHHhcC
Confidence            679999999999999999998889999999999887765442    223221 22  22222   1233333211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       448 ~id~li~~Ag~  458 (657)
T PRK07201        448 HVDYLVNNAGR  458 (657)
T ss_pred             CCCEEEECCCC
Confidence            68999999883

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.15  E-value=0.056  Score=46.06  Aligned_cols=79  Identities=23%  Similarity=0.280  Sum_probs=47.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +++||.|++|++|..+++.+...|++|+++. ++.++.+..    +..+... .+..+-.+. ++.+...+..  ....+
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE-ADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH-HHHHHHHHHHHHhcCCC
Confidence            5899999999999999999998999987765 444433322    2233222 222221111 1222222211  12468


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++|.++|
T Consensus        82 d~li~~ag   89 (248)
T PRK06947         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCc
Confidence            99999887

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.14  E-value=0.16  Score=41.71  Aligned_cols=103  Identities=23%  Similarity=0.406  Sum_probs=60.7

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      +.....+.++++||=.|+  |.|..+..+++.. +.+|++++.+++..+.+++    ++...+- ....+.    .....
T Consensus        32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~-~~~~d~----~~~~~  104 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVE-VIEGSA----PECLA  104 (196)
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeE-EEECch----HHHHh
Confidence            345567788899888876  4455666666554 5799999999987776643    4543211 111111    11111


Q ss_pred             HhcCCcccE-EEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDV-LYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~-v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ... ..+|. .++....  ..++.+.+.|+++|+++...
T Consensus       105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            111 12344 4443222  44678889999999998764

>PRK14967 putative methyltransferase; Provisional

Probab=96.14  E-value=0.11  Score=43.66  Aligned_cols=95  Identities=25%  Similarity=0.335  Sum_probs=61.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ...+.++++||-.|+ |. |..+..+++. ++ +|++++.++...+.+++    .+....+.  ..++   ..    ...
T Consensus        31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~--~~d~---~~----~~~   98 (223)
T PRK14967         31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR--RGDW---AR----AVE   98 (223)
T ss_pred             hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE--ECch---hh----hcc
Confidence            445778899999998 54 8888887775 66 99999999987765543    34322111  1222   11    113


Q ss_pred             CCcccEEEeCCCc----------------------------cchHHHHhccccCCEEEEE
Q 019049          219 LKGVDVLYDPVGG----------------------------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~g~----------------------------~~~~~~~~~l~~~G~~v~~  250 (347)
                      ...||+|+...+.                            ..+..+.+.|+++|+++++
T Consensus        99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            4579999865321                            0234577899999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.14  E-value=0.071  Score=42.85  Aligned_cols=80  Identities=26%  Similarity=0.300  Sum_probs=52.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC--cEE-E--eCCCCCc-hhhHHHHHHHhcCCcc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHV-V--DLSNESV-IPSVKEFLKARKLKGV  222 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~--~~v-~--~~~~~~~-~~~~~~~~~~~~~~~~  222 (347)
                      .+..+|.|+++++|.+.+|.+...|++|.+.+.+.+..+.. +.+|.  +|. +  |..+..- ..-.++..+.  .+..
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~--~g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS--LGTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh--cCCC
Confidence            45689999999999999999999999999999877644433 45664  222 1  2222211 1112222222  2378


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      +++++|+|-
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999994

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.13  E-value=0.055  Score=40.80  Aligned_cols=97  Identities=16%  Similarity=0.243  Sum_probs=61.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcC--CEEEEEecChh--h-HHHHHhcCCcEEEeCCCCCchh----------------hHH
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAE--K-IKFLKSLGVDHVVDLSNESVIP----------------SVK  211 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~----------------~~~  211 (347)
                      |.|.|+||++|..+..+.+...  ++|++.+....  + .+.++++....+.-.++..+..                -.+
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            6799999999999999999987  68877665433  2 2444678877766554432211                012


Q ss_pred             HHHHHhcCCcccEEEeCCC-ccchHHHHhccccCCEEEE
Q 019049          212 EFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~  249 (347)
                      .+.+......+|++++... ...+.-.+..++.+-++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence            2233334457899988754 4777888888887766655

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.13  E-value=0.14  Score=43.54  Aligned_cols=163  Identities=21%  Similarity=0.229  Sum_probs=92.4

Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhH----HHH-HhcCCcEEEeCCCCCchhhHHHHHHHh---cCCcccEEEeCCCc
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGAEKI----KFL-KSLGVDHVVDLSNESVIPSVKEFLKAR---KLKGVDVLYDPVGG  231 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~---~~~~~d~v~d~~g~  231 (347)
                      +++|.+.++.+...|++|+++.++.++.    +.+ ++.+.. ++..+-.+. +.++.+.+..   .++.+|+++++.+.
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~-~~v~~~~~~~~~~~~g~iD~lV~~a~~   83 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDE-ESVEALFDEAVERFGGRIDILVNNAGI   83 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSH-HHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcch-HHHHHHHHHHHhhcCCCeEEEEecccc
Confidence            8999999999999999999999999873    333 345644 454433322 2233333221   12689999887653


Q ss_pred             c------------------------------chHHHHhccccCCEEEEEeecCCCCCCcchh------------------
Q 019049          232 K------------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPAN------------------  263 (347)
Q Consensus       232 ~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------------------  263 (347)
                      .                              ..+.+...++++|+++.++............                  
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~  163 (241)
T PF13561_consen   84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAK  163 (241)
T ss_dssp             CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHH
Confidence            1                              1122334788889999987654322111111                  


Q ss_pred             Hhhh-cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC
Q 019049          264 IALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK  328 (347)
Q Consensus       264 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~  328 (347)
                      .+.. +++++.....+.......... ...++..+.+.   -..+..+....+|+-++...+.+..
T Consensus       164 el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~---~~~pl~r~~~~~evA~~v~fL~s~~  225 (241)
T PF13561_consen  164 ELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELK---KRIPLGRLGTPEEVANAVLFLASDA  225 (241)
T ss_dssp             HHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHH---HHSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred             HhccccCeeeeeecccceeccchhcc-ccccchhhhhh---hhhccCCCcCHHHHHHHHHHHhCcc
Confidence            1235 688888887665442211110 00122222222   1123334457888999988888754

...

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.12  E-value=0.12  Score=47.00  Aligned_cols=92  Identities=25%  Similarity=0.337  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .++++||+|+ |-+|..++..+...|. +|++..++.+|.+.+ +++|+..+ .         ..++....  ..+|+||
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---------l~el~~~l--~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---------LEELLEAL--AEADVVI  243 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---------HHHHHHhh--hhCCEEE
Confidence            6789999999 9999999999999996 899999999987654 67884432 2         23333333  4689999


Q ss_pred             eCCCcc--ch--HHHHhccccCCE--EEEEeec
Q 019049          227 DPVGGK--LT--KESLKLLNWGAQ--ILVIGFA  253 (347)
Q Consensus       227 d~~g~~--~~--~~~~~~l~~~G~--~v~~g~~  253 (347)
                      -+++.+  .+  ....+.++..-+  +++++.|
T Consensus       244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         244 SSTSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             EecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            999874  33  344455555443  3444433

>PRK07574 formate dehydrogenase; Provisional

Probab=96.12  E-value=0.044  Score=49.81  Aligned_cols=88  Identities=18%  Similarity=0.197  Sum_probs=62.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..+++.++.+|.+|++.+++....+..+++|....   .  +    .+++.     ...|+|+.+
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~---~--~----l~ell-----~~aDvV~l~  255 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH---V--S----FDSLV-----SVCDVVTIH  255 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec---C--C----HHHHh-----hcCCEEEEc
Confidence            4679999999 999999999999999999999987643444445553211   1  1    23332     356889888


Q ss_pred             CCc-c----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-K----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-~----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.. +    .+ ...+..|+++..++.++
T Consensus       256 lPlt~~T~~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        256 CPLHPETEHLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             CCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence            773 1    22 45788899988887765

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.11  E-value=0.11  Score=43.55  Aligned_cols=101  Identities=18%  Similarity=0.290  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE---------eCCCCCchhhHHHHHH
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV---------DLSNESVIPSVKEFLK  215 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~---------~~~~~~~~~~~~~~~~  215 (347)
                      .+.++.+||+.|+  |.|.-++-+|. .|++|++++.++...+.+. +.+.....         ......+  ....+..
T Consensus        34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~--~~~D~~~  108 (218)
T PRK13255         34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITI--YCGDFFA  108 (218)
T ss_pred             CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEE--EECcccC
Confidence            4456789999998  56777777765 7999999999998777653 33321100         0000000  0000111


Q ss_pred             Hh--cCCcccEEEeCCC-----c----cchHHHHhccccCCEEEEEe
Q 019049          216 AR--KLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~--~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ..  ....||.|+|.+-     .    ..+..+.++|+|+|++.++.
T Consensus       109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            10  1246899998653     1    24577889999999765543

>PRK09135 pteridine reductase; Provisional

Probab=96.09  E-value=0.079  Score=45.01  Aligned_cols=36  Identities=22%  Similarity=0.290  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            457999999999999999999888999999999853

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.067  Score=45.46  Aligned_cols=34  Identities=26%  Similarity=0.403  Sum_probs=29.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      .+.+++|.|++|++|...+..+...|++|+++.+
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            3578999999999999999988889999988654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.09  E-value=0.062  Score=45.63  Aligned_cols=78  Identities=22%  Similarity=0.278  Sum_probs=49.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ++++|.|++|++|...+..+...|++|+++ .+++++.+..    +..+.. ..+  |..+.+   .+++..+..  ..+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDEN---QVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHH---HHHHHHHHHHHhCC
Confidence            479999999999999999998899998774 4555543322    223322 122  333222   233333322  245


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|+++.++|.
T Consensus        79 ~id~vi~~ag~   89 (247)
T PRK09730         79 PLAALVNNAGI   89 (247)
T ss_pred             CCCEEEECCCC
Confidence            78999999884

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.072  Score=46.34  Aligned_cols=77  Identities=26%  Similarity=0.383  Sum_probs=49.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh-cCCc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR-KLKG  221 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~-~~~~  221 (347)
                      +++++|.|+ |++|..++..+. .|++|++++++.++.+.+.    ..|.. ..+  |..+.+-   .....+.. ..++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~---i~~~~~~~~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES---VKALAATAQTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHH---HHHHHHHHHhcCC
Confidence            457899998 899999998885 7999999999877654432    23422 122  3333221   33333322 1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        77 id~li~nAG~   86 (275)
T PRK06940         77 VTGLVHTAGV   86 (275)
T ss_pred             CCEEEECCCc
Confidence            8999999984

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.07  E-value=0.14  Score=43.03  Aligned_cols=89  Identities=22%  Similarity=0.341  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecC----hhh--------HHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARG----AEK--------IKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~---~V~~~~~~----~~~--------~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      .+++++|+|+ |+.|..++..+...|.   ++++++++    .+|        .++++.++... .+   .+    +.+.
T Consensus        24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~----l~~~   94 (226)
T cd05311          24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT----LKEA   94 (226)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC----HHHH
Confidence            5679999999 9999999998888897   49999987    343        23344443211 10   11    2122


Q ss_pred             HHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEe
Q 019049          214 LKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      .     .++|++|++++...+ ...++.+++...+..+.
T Consensus        95 l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          95 L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     248999999985444 46677777776665543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.06  E-value=0.035  Score=52.30  Aligned_cols=76  Identities=21%  Similarity=0.426  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh---------------------hhHHHHHhcCCcEEEeCCCCCch
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------------------EKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      .+++|+|+|+ |+.|+.++..++..|++|++++..+                     ...++++++|++..++.......
T Consensus       140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            5789999999 9999999999999999999988653                     24567788898766554321100


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCc
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                       ..+..   .  .++|.+|.++|.
T Consensus       219 -~~~~~---~--~~~D~vilAtGa  236 (467)
T TIGR01318       219 -SLDDL---L--EDYDAVFLGVGT  236 (467)
T ss_pred             -CHHHH---H--hcCCEEEEEeCC
Confidence             01221   1  369999999996

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.06  E-value=0.064  Score=52.99  Aligned_cols=80  Identities=24%  Similarity=0.381  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCCc--EE--EeCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVD--HV--VDLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~~--~v--~~~~~~~~~~~~~~~~~~~--  217 (347)
                      .++++||.|++|++|..+++.+...|++|++++++.++.+... +    .+..  ..  .|..+.   +++++.....  
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~---~~v~~a~~~i~~  489 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE---QAVKAAFADVAL  489 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH---HHHHHHHHHHHH
Confidence            4789999999999999999999889999999999887655442 2    2321  11  222222   1233333221  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+++|++++++|.
T Consensus       490 ~~g~iDilV~nAG~  503 (676)
T TIGR02632       490 AYGGVDIVVNNAGI  503 (676)
T ss_pred             hcCCCcEEEECCCC
Confidence            23579999999884

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.03  E-value=0.048  Score=48.57  Aligned_cols=40  Identities=28%  Similarity=0.331  Sum_probs=34.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK  188 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~  188 (347)
                      .|++|||.|++|.+|..++..+...|++|+++.++..+.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4689999999999999999988889999999888765433

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.03  E-value=0.25  Score=44.09  Aligned_cols=100  Identities=17%  Similarity=0.242  Sum_probs=65.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEecChhhHHHHH-h----cCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIG-KVCGA-TIIAVARGAEKIKFLK-S----LGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la-~~~g~-~V~~~~~~~~~~~~~~-~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      ...++++|+|+ |..|...+..+ ...+. +|.+.++++++.+.+. +    ++.... .+.+      .++..     .
T Consensus       125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~------~~~~~-----~  191 (325)
T PRK08618        125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS------ADEAI-----E  191 (325)
T ss_pred             CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC------HHHHH-----h
Confidence            35678999999 99998777554 45576 7999999988776553 2    243211 1211      22222     4


Q ss_pred             cccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcc
Q 019049          221 GVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP  261 (347)
Q Consensus       221 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  261 (347)
                      ..|+|+.|+++..--.. ++++++-.+..+|.........+
T Consensus       192 ~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~  231 (325)
T PRK08618        192 EADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELP  231 (325)
T ss_pred             cCCEEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCC
Confidence            68999999987433233 88999989989987654433333

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.01  E-value=0.034  Score=51.78  Aligned_cols=86  Identities=22%  Similarity=0.288  Sum_probs=56.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|+|+|+.|.+|.+.+..++..|.+|++.++++++. +.+.++|+...   .  +    ..+.     -..+|+|+-|+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~--~----~~e~-----~~~aDvVIlavp   67 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---N--D----NIDA-----AKDADIVIISVP   67 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---c--C----HHHH-----hccCCEEEEecC
Confidence            689999779999999999999999999999988764 45566675211   0  1    1111     134677777776


Q ss_pred             ccc----hHHHHhccccCCEEEEEe
Q 019049          231 GKL----TKESLKLLNWGAQILVIG  251 (347)
Q Consensus       231 ~~~----~~~~~~~l~~~G~~v~~g  251 (347)
                      ...    +..+...++++..++.++
T Consensus        68 ~~~~~~vl~~l~~~l~~~~iViDvs   92 (437)
T PRK08655         68 INVTEDVIKEVAPHVKEGSLLMDVT   92 (437)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEEcc
Confidence            533    233344455566666655

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.01  E-value=0.055  Score=45.74  Aligned_cols=90  Identities=22%  Similarity=0.351  Sum_probs=61.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      |+|.|++|.+|...++.+...+.+|.+++++..  +.+.++..|+..+ ..+-.+    .+.+.+..  .++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~----~~~l~~al--~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDD----PESLVAAL--KGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-----HHHHHHHH--TTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccCC----HHHHHHHH--cCCceEEeecC
Confidence            799999999999999999998999999999864  3556677887544 333222    34444444  48999999888


Q ss_pred             c---c---chHHHHhccccCC--EEEE
Q 019049          231 G---K---LTKESLKLLNWGA--QILV  249 (347)
Q Consensus       231 ~---~---~~~~~~~~l~~~G--~~v~  249 (347)
                      .   .   ....++++.+.-|  +++.
T Consensus        74 ~~~~~~~~~~~~li~Aa~~agVk~~v~  100 (233)
T PF05368_consen   74 PSHPSELEQQKNLIDAAKAAGVKHFVP  100 (233)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred             cchhhhhhhhhhHHHhhhccccceEEE
Confidence            3   2   2234555555544  4543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.067  Score=45.52  Aligned_cols=79  Identities=23%  Similarity=0.395  Sum_probs=48.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHH----HHhcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKF----LKSLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~----~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      ++++||.|++|++|..+++.+...|++|+... +++++.+.    ++..+... .+  |..+.   +...+.....  ..
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE---ADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCH---HHHHHHHHHHHHHh
Confidence            46899999999999999998888999887765 34443332    23334322 22  33322   1233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|+++.++|.
T Consensus        79 ~~id~li~~ag~   90 (248)
T PRK06123         79 GRLDALVNNAGI   90 (248)
T ss_pred             CCCCEEEECCCC
Confidence            468999998874

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.99  E-value=0.025  Score=48.39  Aligned_cols=74  Identities=16%  Similarity=0.104  Sum_probs=54.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||.||||= |..++..+...|.+|+++..++...+.+...|...+.... .+    ...+.......++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~-l~----~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGA-LD----PQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECC-CC----HHHHHHHHHhcCCCEEEEcCCH
Confidence            6999999664 9999988888899999999998877777777655554322 12    2234455556789999999875

This enzyme was found to be a monomer by gel filtration.

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.97  E-value=0.024  Score=46.70  Aligned_cols=98  Identities=15%  Similarity=0.128  Sum_probs=60.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ......++.+||-.|+  |.|..+..+++. |.+|++++.+++-.+.+++    .+...+ .....++       ....-
T Consensus        24 ~~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~-------~~~~~   92 (197)
T PRK11207         24 EAVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDL-------NNLTF   92 (197)
T ss_pred             HhcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecCh-------hhCCc
Confidence            3444557789999998  347777777764 8899999999886665543    232211 1111111       11111


Q ss_pred             CCcccEEEeCCCc---------cchHHHHhccccCCEEEEEe
Q 019049          219 LKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       219 ~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ...||+|+.+..-         ..+..+.++|+++|.++.+.
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            3469999875431         23567788999999976554

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.96  E-value=0.074  Score=43.27  Aligned_cols=96  Identities=24%  Similarity=0.372  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      .+.++.+||-.|+  |.|..+..+++. .+++|++++.+++..+.++    ..+.+. +.....+.    ..   .....
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d~----~~---~~~~~  111 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGRA----EE---FGQEE  111 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEeccH----hh---CCCCC
Confidence            3456889999988  345555555554 4679999999988666554    344432 11111121    11   11235


Q ss_pred             cccEEEeCCCc---cchHHHHhccccCCEEEEEe
Q 019049          221 GVDVLYDPVGG---KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       221 ~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g  251 (347)
                      .||+|+-....   ..++.+.++|+++|+++.+-
T Consensus       112 ~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        112 KFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             CccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            79999864332   34577889999999999873

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.95  E-value=0.037  Score=48.31  Aligned_cols=74  Identities=28%  Similarity=0.218  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+++++|+|+ |+.+.+++..+...|+ +|+++.++.+|.+.+. +++... +....   .   ..+...  .-..+|+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~---~~~~~~--~~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---G---DSGGLA--IEKAAEVL  194 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---c---hhhhhh--cccCCCEE
Confidence            5789999999 9999999999999998 7999999988876664 343211 11110   0   011111  11468999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++|++.
T Consensus       195 InaTp~  200 (282)
T TIGR01809       195 VSTVPA  200 (282)
T ss_pred             EECCCC
Confidence            999885

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.94  E-value=0.032  Score=50.15  Aligned_cols=37  Identities=19%  Similarity=0.232  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ++++|||.|++|.+|..+++.+...|++|+++++...
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            4679999999999999999999999999999887543

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.94  E-value=0.064  Score=44.71  Aligned_cols=94  Identities=18%  Similarity=0.250  Sum_probs=61.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      -+|.+||=+|+.||   ...+-+.++|++|++++.+++-.+.++......  -+++....    ++++..  .++.||+|
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~----~edl~~--~~~~FDvV  128 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQAT----VEDLAS--AGGQFDVV  128 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhh----HHHHHh--cCCCccEE
Confidence            37889999999554   444555568999999999999888886422111  13344322    222222  23689999


Q ss_pred             EeC-----CCc--cchHHHHhccccCCEEEEE
Q 019049          226 YDP-----VGG--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       226 ~d~-----~g~--~~~~~~~~~l~~~G~~v~~  250 (347)
                      ++.     +..  ..+..+.++++|+|.+.+.
T Consensus       129 ~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         129 TCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             EEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            753     333  2457789999999998874

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.93  E-value=0.13  Score=42.52  Aligned_cols=94  Identities=15%  Similarity=0.158  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|+|+|+ |.+|.-=+.++...|++|++++..- .+...+...+-   +......+.   .   +  ...++++||-
T Consensus        11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~---i~~~~~~~~---~---~--~~~~~~lvia   78 (210)
T COG1648          11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGK---IKWIEREFD---A---E--DLDDAFLVIA   78 (210)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcC---cchhhcccC---h---h--hhcCceEEEE
Confidence            5789999999 9999998999999999999998766 33333333222   111112220   0   0  1134889999


Q ss_pred             CCCccch-HHHHhccccCCEEEEEeecC
Q 019049          228 PVGGKLT-KESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       228 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +++++.+ +......+..+.+|.+....
T Consensus        79 At~d~~ln~~i~~~a~~~~i~vNv~D~p  106 (210)
T COG1648          79 ATDDEELNERIAKAARERRILVNVVDDP  106 (210)
T ss_pred             eCCCHHHHHHHHHHHHHhCCceeccCCc
Confidence            9998665 55667778888887765433

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.92  E-value=0.079  Score=45.44  Aligned_cols=35  Identities=26%  Similarity=0.304  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecC
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .++++||.|+++  ++|...+..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            457899999984  89999998888889999999876

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.92  E-value=0.071  Score=44.78  Aligned_cols=100  Identities=19%  Similarity=0.279  Sum_probs=71.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....++.||++|+=.|.  |.|.+++-+|+..|.  +|+..+...+..+.++    ++|....+.....+.       .+
T Consensus        87 ~~~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv-------~~  157 (256)
T COG2519          87 VARLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDV-------RE  157 (256)
T ss_pred             HHHcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccc-------cc
Confidence            36789999999998875  568888889988875  8999999888777664    345333222222222       22


Q ss_pred             HhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEE
Q 019049          216 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  250 (347)
                      ...+..+|.+|--...  ..++.+.++|+++|.++.+
T Consensus       158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y  194 (256)
T COG2519         158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVY  194 (256)
T ss_pred             cccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEE
Confidence            2234478888755554  5779999999999999986

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.90  E-value=0.078  Score=48.65  Aligned_cols=90  Identities=24%  Similarity=0.332  Sum_probs=56.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHh--cCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCG-A-TIIAVARGAEKIKFLKS--LGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g-~-~V~~~~~~~~~~~~~~~--~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+  .+.. .....+-.+    .+.+.+..  .+.|+|++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~--~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PESLAELL--RGCDVVIN   73 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HHHHHHHH--TTSSEEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HHHHHHHH--hcCCEEEE
Confidence            789999 999999999888775 4 89999999998777754  2221 111112112    23344443  35599999


Q ss_pred             CCCccchH-HHHhccccCCEEEE
Q 019049          228 PVGGKLTK-ESLKLLNWGAQILV  249 (347)
Q Consensus       228 ~~g~~~~~-~~~~~l~~~G~~v~  249 (347)
                      |+|..... .+-.+++.+-.+++
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEE
T ss_pred             CCccchhHHHHHHHHHhCCCeec
Confidence            99976433 44466677778877

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07041 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.07  Score=44.86  Aligned_cols=75  Identities=20%  Similarity=0.310  Sum_probs=49.3

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc--CC-cEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--GV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       154 lI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~--g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +|.|++|++|...++.+...|++|++++++.++.+... .+  +. .+++..+-.+ .+++++..+..  +.+|++++++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~--~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITD-EAAVDAFFAEA--GPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHhc--CCCCEEEECC
Confidence            58999999999999999889999999999877655432 22  22 1222222111 22244444433  4689999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      |.
T Consensus        78 g~   79 (230)
T PRK07041         78 AD   79 (230)
T ss_pred             CC
Confidence            74

>PRK07069 short chain dehydrogenase; Validated

Probab=95.89  E-value=0.039  Score=47.07  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=49.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHH-hc----CCcE----EEeCCCCCchhhHHHHHHHh--cC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFLK-SL----GVDH----VVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~~-~~----g~~~----v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      +++|.|++|++|...++.+...|++|++++++ .++.+.+. ++    +...    ..|..+.+   ..++.....  ..
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~   77 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEA---QWQALLAQAADAM   77 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHH---HHHHHHHHHHHHc
Confidence            38999999999999999998899999999987 45444332 22    2211    12333322   133333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|+++.++|.
T Consensus        78 ~~id~vi~~ag~   89 (251)
T PRK07069         78 GGLSVLVNNAGV   89 (251)
T ss_pred             CCccEEEECCCc
Confidence            468999999873

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.89  E-value=0.058  Score=48.13  Aligned_cols=39  Identities=31%  Similarity=0.337  Sum_probs=34.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI  187 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~  187 (347)
                      .+++|||.|++|.+|..++..+...|++|++++++.++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR   42 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence            578999999999999999999999999999888776543

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.85  E-value=0.13  Score=44.48  Aligned_cols=105  Identities=18%  Similarity=0.309  Sum_probs=66.7

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcC
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      +....++.++.+||=+|+ | .|..+..+++..+++|++++.+++-.+.+++... ..-+.....+.   ..   .....
T Consensus        44 ~l~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~---~~---~~~~~  115 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDI---LK---KDFPE  115 (263)
T ss_pred             HHHhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCc---cc---CCCCC
Confidence            335678899999999988 3 4556667777778899999999987777765321 10011111111   00   00123


Q ss_pred             CcccEEEeCC-----C--c--cchHHHHhccccCCEEEEEeec
Q 019049          220 KGVDVLYDPV-----G--G--KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       220 ~~~d~v~d~~-----g--~--~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      ..||+|+..-     +  .  ..++.+.+.|+|+|+++.....
T Consensus       116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~  158 (263)
T PTZ00098        116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDYC  158 (263)
T ss_pred             CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            5699998521     2  1  2457788999999999987543

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.85  E-value=0.0041  Score=48.73  Aligned_cols=91  Identities=16%  Similarity=0.219  Sum_probs=59.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCC------CchhhHHHHHHHhcCCcccEEE
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE------SVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      |+|.|+ |.+|...+..++..|.+|..+.+.+ +.+..++.|........+.      .... .     ......+|++|
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~D~vi   72 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISA-P-----SADAGPYDLVI   72 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESS-H-----GHHHSTESEEE
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCc-c-----hhccCCCcEEE
Confidence            689999 9999999988888999999999988 7777877663322111000      0000 0     11236899999


Q ss_pred             eCCCccchH----HHHhccccCCEEEEEe
Q 019049          227 DPVGGKLTK----ESLKLLNWGAQILVIG  251 (347)
Q Consensus       227 d~~g~~~~~----~~~~~l~~~G~~v~~g  251 (347)
                      -|+-.....    .+...+.+...++.+.
T Consensus        73 v~vKa~~~~~~l~~l~~~~~~~t~iv~~q  101 (151)
T PF02558_consen   73 VAVKAYQLEQALQSLKPYLDPNTTIVSLQ  101 (151)
T ss_dssp             E-SSGGGHHHHHHHHCTGEETTEEEEEES
T ss_pred             EEecccchHHHHHHHhhccCCCcEEEEEe
Confidence            999764443    3445556666666653

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.84  E-value=0.14  Score=45.92  Aligned_cols=87  Identities=25%  Similarity=0.309  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++.+|.+|++.+++.... .....|...      .+    .+++.     ...|+|+.+
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~------~~----l~ell-----~~aDiV~l~  211 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEY------RP----LEELL-----RESDFVSLH  211 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEe------cC----HHHHH-----hhCCEEEEe
Confidence            5789999999 9999999999999999999999875432 233444321      11    23332     356999988


Q ss_pred             CCc-c----ch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-K----LT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-~----~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      +.. +    .+ ...+..|+++..++.++.
T Consensus       212 lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        212 VPLTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             CCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            874 1    23 567899999998888753

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.84  E-value=0.08  Score=45.50  Aligned_cols=95  Identities=22%  Similarity=0.223  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      ......++++||=+|+  |.|..+..+++.. +.+|++++.++.-.+.+++.+...+ ..+   .    .   .......
T Consensus        23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d---~----~---~~~~~~~   89 (255)
T PRK14103         23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGD---V----R---DWKPKPD   89 (255)
T ss_pred             HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcC---h----h---hCCCCCC
Confidence            4556678899999988  3367777777765 6799999999988888877664432 211   1    1   1112357


Q ss_pred             ccEEEeCCC-----c--cchHHHHhccccCCEEEEE
Q 019049          222 VDVLYDPVG-----G--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       222 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~  250 (347)
                      ||+|+....     .  ..+..+.+.|+|+|.++..
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            999987543     2  3457788999999999875

>PRK14982 acyl-ACP reductase; Provisional

Probab=95.82  E-value=0.19  Score=44.88  Aligned_cols=160  Identities=16%  Similarity=0.149  Sum_probs=89.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKV-CGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~-~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+++|+|+||+|.+|..+++.+.. .|. +++++.++.++...+. +++...+            ..+.+..  ...|+|
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------------~~l~~~l--~~aDiV  219 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------------LSLEEAL--PEADIV  219 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------------HhHHHHH--ccCCEE
Confidence            578999999999999999888864 565 8999999877776654 3331111            1111222  368999


Q ss_pred             EeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEE-------EEec-cc----cc-cCchhHHHH
Q 019049          226 YDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG-------LYWG-SY----KI-HRPHVLEDS  291 (347)
Q Consensus       226 ~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~----~~-~~~~~~~~~  291 (347)
                      +.+++.+ ....-...+++.-.+++++.+..-.+...     ..+..+.-       .... ..    .. ..+......
T Consensus       220 v~~ts~~~~~~I~~~~l~~~~~viDiAvPRDVd~~v~-----~~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac  294 (340)
T PRK14982        220 VWVASMPKGVEIDPETLKKPCLMIDGGYPKNLDTKVQ-----GPGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFAC  294 (340)
T ss_pred             EECCcCCcCCcCCHHHhCCCeEEEEecCCCCCCcccC-----CCCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHH
Confidence            9988863 22111234566667777765542111111     12222211       0000 00    01 111112234


Q ss_pred             HHHHHHHHHcCcee-eeecee-eChhhHHHHHHHHHcC
Q 019049          292 LRELLLWAAKGLIT-IHISHT-YSPSEANLAFSAIEDR  327 (347)
Q Consensus       292 ~~~~~~~l~~g~l~-~~~~~~-~~~~~~~~a~~~~~~~  327 (347)
                      +.+.+=+-.+|... ..+.+. .+++++.+..+...+.
T Consensus       295 ~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kH  332 (340)
T PRK14982        295 FAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKH  332 (340)
T ss_pred             HHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHc
Confidence            45555555677776 356666 7889988887766554

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.81  E-value=0.035  Score=54.49  Aligned_cols=75  Identities=19%  Similarity=0.367  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh---------------------hHHHHHhcCCcEEEeCCCC-Cc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE---------------------KIKFLKSLGVDHVVDLSNE-SV  206 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~-~~  206 (347)
                      .+++|+|+|+ |+.|+.++..++..|++|++++..+.                     +.++++++|++..++.... +.
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            4889999999 99999999999999999999987652                     4567788898766654321 11


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                        ....   ..  .++|.+|.++|.
T Consensus       388 --~~~~---l~--~~~DaV~latGa  405 (639)
T PRK12809        388 --TFSD---LT--SEYDAVFIGVGT  405 (639)
T ss_pred             --CHHH---HH--hcCCEEEEeCCC
Confidence              0221   11  468999999996

>PRK08317 hypothetical protein; Provisional

Probab=95.81  E-value=0.11  Score=43.81  Aligned_cols=99  Identities=15%  Similarity=0.254  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhc----CCc-EEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL----GVD-HVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++++||-.|+ |. |..+..+++..  +.++++++.+++..+.+++.    +.. .+...+....        .
T Consensus        13 ~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--------~   82 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGL--------P   82 (241)
T ss_pred             HHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccC--------C
Confidence            5677889999999998 43 88888888876  35899999999887777654    111 1111111110        0


Q ss_pred             HhcCCcccEEEeCC-----Cc--cchHHHHhccccCCEEEEEee
Q 019049          216 ARKLKGVDVLYDPV-----GG--KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       216 ~~~~~~~d~v~d~~-----g~--~~~~~~~~~l~~~G~~v~~g~  252 (347)
                       .....||.|+...     .+  ..+..+.++|+++|.++....
T Consensus        83 -~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         83 -FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             -CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence             1235789887532     22  356788999999999987653

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.79  E-value=0.12  Score=40.65  Aligned_cols=98  Identities=17%  Similarity=0.175  Sum_probs=59.2

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ..+|++....+..|....---.|++|+|.|.+..+|.-++.++...|+.|+........                     
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~---------------------   72 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKN---------------------   72 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSS---------------------
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCc---------------------
Confidence            34555555555555332222478999999998899999999999999999887654321                     


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        .++..     ...|+++-++|.+.+-. .++++++..++.+|...
T Consensus        73 --l~~~~-----~~ADIVVsa~G~~~~i~-~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   73 --LQEIT-----RRADIVVSAVGKPNLIK-ADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             --HHHHH-----TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred             --cccee-----eeccEEeeeeccccccc-cccccCCcEEEecCCcc
Confidence              11221     46799999999765522 36889998999888553

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.78  E-value=0.065  Score=50.72  Aligned_cols=69  Identities=23%  Similarity=0.276  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-----hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-----KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .+++|+|+|+ |++|+.++..++..|++|++++.++.     ..+.+++.|.....+....             ....+|
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~~D   80 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPEDTD   80 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCCCC
Confidence            5679999999 99999999999999999999986542     1234566776554432211             024578


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      .|+.+.|-
T Consensus        81 ~Vv~s~Gi   88 (480)
T PRK01438         81 LVVTSPGW   88 (480)
T ss_pred             EEEECCCc
Confidence            99888875

>PLN00015 protochlorophyllide reductase

Probab=95.78  E-value=0.064  Score=47.55  Aligned_cols=75  Identities=24%  Similarity=0.301  Sum_probs=49.2

Q ss_pred             EEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH-hcC---Cc-E--EEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049          154 LVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLG---VD-H--VVDLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       154 lI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~-~~g---~~-~--v~~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      +|.|+++++|..+++.+...| ++|++++++.++.+.+. +++   .. .  ..|..+.+   +++++....  ..+++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD---SVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHH---HHHHHHHHHHhcCCCCC
Confidence            589999999999999888899 89999999887665443 332   11 1  12333322   233333322  234789


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus        78 ~lInnAG~   85 (308)
T PLN00015         78 VLVCNAAV   85 (308)
T ss_pred             EEEECCCc
Confidence            99998873

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=95.76  E-value=0.021  Score=48.43  Aligned_cols=67  Identities=19%  Similarity=0.238  Sum_probs=47.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  232 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  232 (347)
                      |+|.|++|-+|...++.++..|.+|+++++++.+.+.-......         .   .+.+.... ..++|+|||-+|.+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~---------~---~~~~~~~~-~~~~DavINLAG~~   67 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT---------L---WEGLADAL-TLGIDAVINLAGEP   67 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc---------c---cchhhhcc-cCCCCEEEECCCCc
Confidence            68999999999999999999999999999998766543222211         0   11111111 12799999998864

>PLN02214 cinnamoyl-CoA reductase

Probab=95.75  E-value=0.092  Score=47.31  Aligned_cols=38  Identities=26%  Similarity=0.329  Sum_probs=34.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      ++++|||.|++|.+|..++..+...|++|++++++.++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            56799999999999999999999999999999987653

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.71  E-value=0.11  Score=46.98  Aligned_cols=100  Identities=16%  Similarity=0.254  Sum_probs=66.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEe--cChhhH-HHHHhcCCcEEEeCCCCCchh--------------hHH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVA--RGAEKI-KFLKSLGVDHVVDLSNESVIP--------------SVK  211 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~--~~~~~~-~~~~~~g~~~v~~~~~~~~~~--------------~~~  211 (347)
                      ++|.|.|+||++|..++...+..  .++|++++  ++.+++ +.+++++...+.-.+.....+              -.+
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            57999999999999999988766  56888776  333343 444678877665544321100              011


Q ss_pred             HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049          212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  250 (347)
                      .+.+......+|+|+++.++ ..+...+.+++.|-++.+.
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA  121 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA  121 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence            22233333468999998876 5677788888888777664

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.71  E-value=0.12  Score=46.81  Aligned_cols=41  Identities=27%  Similarity=0.217  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      .+.+|||+|++|.+|..+++.+...|++|++++++.++...
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~   49 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLH   49 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence            46799999999999999999999899999999887665443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.71  E-value=0.061  Score=48.41  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ++|||+||+|.+|..+++.+...|++|++++++.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            47999999999999999999999999999987653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.70  E-value=0.072  Score=45.45  Aligned_cols=37  Identities=41%  Similarity=0.559  Sum_probs=32.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .+++++|.|+++++|.+++..+...|++|+++.++.+
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~   40 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE   40 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence            5789999999999999999888899999888887754

>PLN02244 tocopherol O-methyltransferase

Probab=95.69  E-value=0.12  Score=46.50  Aligned_cols=94  Identities=13%  Similarity=0.244  Sum_probs=63.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHHhcCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      .++++||=+|+  |.|..+..+++..|++|++++.++...+.+++    .|..   .+...+..+.         -...+
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~---------~~~~~  185 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ---------PFEDG  185 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC---------CCCCC
Confidence            67889998887  45777888888889999999999987666543    2321   1111111111         01235


Q ss_pred             cccEEEeCCCc-------cchHHHHhccccCCEEEEEee
Q 019049          221 GVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       221 ~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      .||+|+.....       ..+.++.+.|+++|++++...
T Consensus       186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        186 QFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             CccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            79999864332       245778899999999998753

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.68  E-value=0.52  Score=41.48  Aligned_cols=39  Identities=18%  Similarity=0.281  Sum_probs=34.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      -++|.|+|+ |.+|...++.+...|.+|++.+.++++.+.
T Consensus         4 ~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~   42 (295)
T PLN02545          4 IKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSR   42 (295)
T ss_pred             cCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence            368999999 999999999998899999999999887654

>PLN00016 RNA-binding protein; Provisional

Probab=95.67  E-value=0.086  Score=48.20  Aligned_cols=95  Identities=21%  Similarity=0.203  Sum_probs=61.5

Q ss_pred             CCEEEEe----cCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-----------HHhcCCcEEEeCCCCCchhhHHHHH
Q 019049          150 GQVLLVL----GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-----------LKSLGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       150 ~~~VlI~----g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-----------~~~~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      ..+|||+    |++|-+|..++..+...|.+|++++++..+...           +...|...+. .   +.    ..+.
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~---D~----~d~~  123 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G---DP----ADVK  123 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e---cH----HHHH
Confidence            4689999    999999999999998899999999987654221           1123333222 1   11    1122


Q ss_pred             HHhcCCcccEEEeCCCcc--chHHHHhccccCC--EEEEEee
Q 019049          215 KARKLKGVDVLYDPVGGK--LTKESLKLLNWGA--QILVIGF  252 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G--~~v~~g~  252 (347)
                      ......++|+|+++.+..  ....+++.++..|  +++.++.
T Consensus       124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            222345799999998753  2345566665443  7887664

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.66  E-value=0.041  Score=46.71  Aligned_cols=106  Identities=15%  Similarity=0.270  Sum_probs=65.6

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      +....++.||++|+=.|.  |.|.++..+++..|  .+|+..+.++++.+.++    ..|....+.....++   .+.-.
T Consensus        32 I~~~l~i~pG~~VlEaGt--GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv---~~~g~  106 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGT--GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDV---CEEGF  106 (247)
T ss_dssp             HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-G---GCG--
T ss_pred             HHHHcCCCCCCEEEEecC--CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecce---ecccc
Confidence            446789999999998875  56788888888876  39999999999887774    355432222222222   00000


Q ss_pred             HHhcCCcccEEEeCCCc--cchHHHHhcc-ccCCEEEEEe
Q 019049          215 KARKLKGVDVLYDPVGG--KLTKESLKLL-NWGAQILVIG  251 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l-~~~G~~v~~g  251 (347)
                      ..--...+|.||-=.+.  ..+..+.+.| +++|+++.+.
T Consensus       107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred             cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence            00012468888755554  5678999999 8999999874

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.66  E-value=0.11  Score=46.42  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=47.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH-hcCC--cEEE--eCCCCCchhhHHHHHHHhcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK-SLGV--DHVV--DLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~-~~g~--~~v~--~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      .+++|||+|++|.+|..+++.+...|  .+|++++++..+...+. .+..  ..++  |..+      .+.+....  .+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d------~~~l~~~~--~~   74 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD------KERLTRAL--RG   74 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC------HHHHHHHH--hc
Confidence            46899999999999999998877765  68998887765443332 2221  1122  2222      12222222  25


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|.++|.
T Consensus        75 iD~Vih~Ag~   84 (324)
T TIGR03589        75 VDYVVHAAAL   84 (324)
T ss_pred             CCEEEECccc
Confidence            8999998873

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.66  E-value=0.13  Score=44.58  Aligned_cols=96  Identities=17%  Similarity=0.214  Sum_probs=67.9

Q ss_pred             cCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          129 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ..||+.......| +..++ -.|++|+|.|.+..+|.-++.++...|++|++..+.                   ..+  
T Consensus       137 ~~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------------t~~--  194 (285)
T PRK14189        137 FRPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------------TRD--  194 (285)
T ss_pred             CcCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------------CCC--
Confidence            4566655555544 33343 379999999998888999999999999999875331                   111  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        +++.+     ...|+++-++|.+.+-. -++++++..++.+|...
T Consensus       195 --l~~~~-----~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~  233 (285)
T PRK14189        195 --LAAHT-----RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR  233 (285)
T ss_pred             --HHHHh-----hhCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence              12221     46799999999865522 28999999999998553

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.65  E-value=0.21  Score=43.19  Aligned_cols=97  Identities=16%  Similarity=0.222  Sum_probs=68.5

Q ss_pred             ccCcchHHHHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          128 AALPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~-~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      +..||+....+.-| +..++. .|++|+|.|.+..+|.-++.++...|++|++.......                    
T Consensus       135 ~~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~--------------------  193 (285)
T PRK14191        135 GFVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD--------------------  193 (285)
T ss_pred             CCCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH--------------------
Confidence            34566666656555 344443 69999999997799999999999999999876432111                    


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                         +.+.   +  ..+|+++-++|.+.+-. -++++++..++.+|...
T Consensus       194 ---l~~~---~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        194 ---LSFY---T--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR  232 (285)
T ss_pred             ---HHHH---H--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence               1111   1  46799999999876522 45779999999998643

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.63  E-value=0.044  Score=46.19  Aligned_cols=73  Identities=25%  Similarity=0.389  Sum_probs=49.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcE-EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      |||.||+|-+|..++..+...|.+|+.+.++..+...... ..... ..|..+.+.   .+++.+   ...+|.||.+++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~---~~~~~~---~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQ---LEKLLE---KANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHH---HHHHHH---HHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccc---cccccc---ccCceEEEEeec
Confidence            7999999999999999999999999988887765544432 23221 223332211   333333   337899999887


Q ss_pred             c
Q 019049          231 G  231 (347)
Q Consensus       231 ~  231 (347)
                      .
T Consensus        75 ~   75 (236)
T PF01370_consen   75 F   75 (236)
T ss_dssp             S
T ss_pred             c
Confidence            5

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.63  E-value=0.057  Score=50.65  Aligned_cols=70  Identities=33%  Similarity=0.451  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hH----HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .+++|+|+|+ |.+|+.++..+...|++|++++.+.. ..    +.+.+.|..... .+..+      .     ..+++|
T Consensus         4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~------~-----~~~~~d   70 (450)
T PRK14106          4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE------E-----FLEGVD   70 (450)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch------h-----HhhcCC
Confidence            4689999999 77999999999999999999998742 22    333445654222 11111      1     124689


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      +|+.++|.
T Consensus        71 ~vv~~~g~   78 (450)
T PRK14106         71 LVVVSPGV   78 (450)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.62  E-value=0.16  Score=44.01  Aligned_cols=95  Identities=20%  Similarity=0.213  Sum_probs=69.2

Q ss_pred             cCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          129 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ..||+....+..+ +..++ -.|++++|.|-+..+|.-++.++...|++|++..+.-.                   +  
T Consensus       138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~-------------------~--  195 (285)
T PRK10792        138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK-------------------N--  195 (285)
T ss_pred             CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC-------------------C--
Confidence            4577666666555 33444 26999999999888999999999999999988765311                   1  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeec
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                        +++..     ..+|+++.++|.+.+-. -++++++..++.+|..
T Consensus       196 --l~~~~-----~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin  233 (285)
T PRK10792        196 --LRHHV-----RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             --HHHHH-----hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence              12111     46899999999866522 3889999999999854

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.61  E-value=0.2  Score=38.57  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=66.7

Q ss_pred             cCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          129 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      .+|+........+. ..++ -.|++|+|+|-+..+|.-++.++...|++|+...+...                   +  
T Consensus         7 ~~p~t~~a~~~ll~-~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------------~--   64 (140)
T cd05212           7 FVSPVAKAVKELLN-KEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------------Q--   64 (140)
T ss_pred             ccccHHHHHHHHHH-HcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------------C--
Confidence            34555554454443 3343 36899999999999999999999999999998875321                   1  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        +++..     ...|+++-++|.+.+ ---++++++-.++.+|...
T Consensus        65 --l~~~v-----~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          65 --LQSKV-----HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             --HHHHH-----hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence              11111     467999999997633 2247899999888776544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.60  E-value=0.14  Score=44.90  Aligned_cols=35  Identities=31%  Similarity=0.371  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~  184 (347)
                      .+++++|.|+ |++|.+++..+...|++ |+++.++.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            5789999999 89999999888899995 99999985

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.60  E-value=0.094  Score=43.66  Aligned_cols=33  Identities=30%  Similarity=0.362  Sum_probs=28.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~  182 (347)
                      ...+|+|.|. |++|.+++..+-+.|. +++.++.
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~   62 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDM   62 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEec
Confidence            4569999999 9999999999999998 7776654

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.59  E-value=0.17  Score=44.63  Aligned_cols=43  Identities=19%  Similarity=0.231  Sum_probs=38.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV  195 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~  195 (347)
                      +|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|+
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~   44 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRT   44 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC
Confidence            5889998 999999988888889999999999999888877664

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.59  E-value=0.16  Score=41.93  Aligned_cols=108  Identities=22%  Similarity=0.270  Sum_probs=76.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ...++...++++.+|.=.|-+.++..++--.+.+|++++.+++..+..    +..|.++-++.......+.+.+.....+
T Consensus        67 ~li~~~~ak~~lelGvfTGySaL~~Alalp~dGrv~a~eid~~~~~~~~~~~k~agv~~KI~~i~g~a~esLd~l~~~~~  146 (237)
T KOG1663|consen   67 MLIRLLNAKRTLELGVFTGYSALAVALALPEDGRVVAIEIDADAYEIGLELVKLAGVDHKITFIEGPALESLDELLADGE  146 (237)
T ss_pred             HHHHHhCCceEEEEecccCHHHHHHHHhcCCCceEEEEecChHHHHHhHHHHHhccccceeeeeecchhhhHHHHHhcCC
Confidence            345556778899998755444444444444578999999988855444    4577888888777766666777776666


Q ss_pred             CCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          219 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      .+.||.+|--.--    ..+..+++++++||.++.=
T Consensus       147 ~~tfDfaFvDadK~nY~~y~e~~l~Llr~GGvi~~D  182 (237)
T KOG1663|consen  147 SGTFDFAFVDADKDNYSNYYERLLRLLRVGGVIVVD  182 (237)
T ss_pred             CCceeEEEEccchHHHHHHHHHHHhhcccccEEEEe
Confidence            7789999844432    3457899999999998863

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.59  E-value=0.033  Score=39.75  Aligned_cols=85  Identities=28%  Similarity=0.314  Sum_probs=56.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC---CEEEEE-ecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG---ATIIAV-ARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g---~~V~~~-~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      +|.|.|+ |.+|.+.++-+...|   .+|+.. .+++++.+.+. +++...+.. +       ..++.+     ..|++|
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~-------~~~~~~-----~advvi   66 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-D-------NEEAAQ-----EADVVI   66 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-E-------HHHHHH-----HTSEEE
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-C-------hHHhhc-----cCCEEE
Confidence            5788888 999999999999999   789955 99999887774 566443321 1       222222     569999


Q ss_pred             eCCCccchHHHHhc---cccCCEEEEE
Q 019049          227 DPVGGKLTKESLKL---LNWGAQILVI  250 (347)
Q Consensus       227 d~~g~~~~~~~~~~---l~~~G~~v~~  250 (347)
                      -|+....+...++.   ..++..++.+
T Consensus        67 lav~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   67 LAVKPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             E-S-GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEECHHHHHHHHHHHhhccCCCEEEEe
Confidence            99998776655543   4455555554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN03075 nicotianamine synthase; Provisional

Probab=95.59  E-value=0.14  Score=44.54  Aligned_cols=95  Identities=14%  Similarity=0.177  Sum_probs=64.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcC-----CcEEEeCCCCCchhhHHHHHHHh-cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLG-----VDHVVDLSNESVIPSVKEFLKAR-KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~~~~~~-~~~  220 (347)
                      +.++|+-+|. |+.|+.++-+++.+  +.+++.++.+++..+.+++.-     ...-+.....+.       .+.. ...
T Consensus       123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da-------~~~~~~l~  194 (296)
T PLN03075        123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADV-------MDVTESLK  194 (296)
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECch-------hhcccccC
Confidence            7789999999 88888888777654  458999999999887776522     111111221221       1111 135


Q ss_pred             cccEEEeCC------Cc--cchHHHHhccccCCEEEEEe
Q 019049          221 GVDVLYDPV------GG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       221 ~~d~v~d~~------g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                      +||+||..+      ..  ..+..+.+.|+++|.++.-.
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            799998765      22  35688899999999998753

>PLN02366 spermidine synthase

Probab=95.59  E-value=0.13  Score=45.44  Aligned_cols=101  Identities=18%  Similarity=0.135  Sum_probs=59.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCC-cEEEeCCCCCc-hhhHHHHHHHhcCCccc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGV-DHVVDLSNESV-IPSVKEFLKARKLKGVD  223 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~d  223 (347)
                      .+.++|||+|+ |. |.++..++++.+. +|++++.+++-.+.+++ +.. ...++.....+ .......++.+..+.||
T Consensus        90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            45689999998 43 6677778887664 89999988876666665 221 00011000000 00012233333345799


Q ss_pred             EEEeCCCc-----------cchHHHHhccccCCEEEEE
Q 019049          224 VLYDPVGG-----------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       224 ~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~  250 (347)
                      +||.-...           +.++.+.++|+++|.++.-
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            99853322           1356788999999999764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.57  E-value=0.12  Score=44.23  Aligned_cols=39  Identities=33%  Similarity=0.406  Sum_probs=31.9

Q ss_pred             EEEEecCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHH
Q 019049          152 VLLVLGAAGGVGVAAVQIGKV----CGATIIAVARGAEKIKFL  190 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~----~g~~V~~~~~~~~~~~~~  190 (347)
                      .++|.|+++++|..++..+..    .|++|+++.++.++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~   44 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL   44 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH
Confidence            589999999999988765543    699999999988776554

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.55  E-value=0.11  Score=44.82  Aligned_cols=81  Identities=21%  Similarity=0.211  Sum_probs=49.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHH-Hhc----CCc-E--EEeCCCCCc-hhhHHHHHHHh--c
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL-KSL----GVD-H--VVDLSNESV-IPSVKEFLKAR--K  218 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~-~~~----g~~-~--v~~~~~~~~-~~~~~~~~~~~--~  218 (347)
                      .+++|.|+++++|...++.+...|++|+++.+. .++.+.+ +++    +.. .  ..|..+.+. .+..+++.+..  .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            478999999999999999999999999988653 3443332 222    211 1  223333321 11123333221  2


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            3479999999873

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.55  E-value=0.052  Score=48.30  Aligned_cols=38  Identities=29%  Similarity=0.344  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      .+++|||+|++|.+|..++..+...|.+|++++++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            36799999999999999999999999999998887653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.53  E-value=0.085  Score=46.35  Aligned_cols=75  Identities=28%  Similarity=0.361  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH---HHHHhcC-Cc---E--EEeCCCCCchhhHHHHHHHhcC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI---KFLKSLG-VD---H--VVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~---~~~~~~g-~~---~--v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      .+.+|+|.||+|-+|...+..+...|++|.+++|++++.   +.++++. +.   .  .-|..+.+.      +....  
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~s------f~~ai--   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGS------FDKAI--   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccch------HHHHH--
Confidence            567999999999999999999999999999999998863   2455544 21   1  112222221      22222  


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      .|+|.||-++..
T Consensus        77 ~gcdgVfH~Asp   88 (327)
T KOG1502|consen   77 DGCDGVFHTASP   88 (327)
T ss_pred             hCCCEEEEeCcc
Confidence            468999887764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.50  E-value=0.1  Score=43.97  Aligned_cols=76  Identities=33%  Similarity=0.402  Sum_probs=47.0

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHH----HHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIK----FLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~----~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +||+|++|++|..+++.+...|++|++++++. ++.+    .++..|.. ..+  |..+..   ++++.....  ....+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDRE---DVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHH---HHHHHHHHHHHHhCCC
Confidence            58999999999999999988999999998764 2222    22334432 122  322222   122222211  12468


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |.++.+.|.
T Consensus        78 d~vi~~ag~   86 (239)
T TIGR01830        78 DILVNNAGI   86 (239)
T ss_pred             CEEEECCCC
Confidence            999998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.50  E-value=0.77  Score=39.26  Aligned_cols=97  Identities=13%  Similarity=0.142  Sum_probs=62.0

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      ....++.+||-.|+ |. |..+..+++ .|.+|++++.+++..+.+++... ...+..+...+         ......||
T Consensus        38 l~~~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~---------~~~~~~fD  105 (251)
T PRK10258         38 LPQRKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESL---------PLATATFD  105 (251)
T ss_pred             cCccCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccC---------cCCCCcEE
Confidence            33345779999998 32 555555544 68899999999998888876432 22222111111         01234699


Q ss_pred             EEEeCCC-----c--cchHHHHhccccCCEEEEEeec
Q 019049          224 VLYDPVG-----G--KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       224 ~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +|+....     +  ..+.++.+.|+++|.++.....
T Consensus       106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~  142 (251)
T PRK10258        106 LAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLV  142 (251)
T ss_pred             EEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            9986543     1  3467788999999999986543

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.48  E-value=0.14  Score=43.43  Aligned_cols=34  Identities=29%  Similarity=0.298  Sum_probs=30.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ++++|.|++|++|..+++.+...|++|++++++.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~   36 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG   36 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence            4899999999999999998888899999998874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.47  E-value=0.048  Score=47.63  Aligned_cols=95  Identities=8%  Similarity=0.152  Sum_probs=58.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh-cCCc-ccEEEeC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR-KLKG-VDVLYDP  228 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~~~-~d~v~d~  228 (347)
                      +|+|.|++|.+|..+++.+...|.+|.++++++++..   ..+... ..|+.+.+.   +....+.. .-.+ +|.+|-+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~---l~~a~~~~~~~~g~~d~v~~~   74 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDT---WDNPFSSDDGMEPEISAVYLV   74 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHH---HHHHHhcccCcCCceeEEEEe
Confidence            4899999999999999999889999999999876532   223221 234443322   22222111 1135 8999877


Q ss_pred             CCcc-----chHHHHhccccCC--EEEEEee
Q 019049          229 VGGK-----LTKESLKLLNWGA--QILVIGF  252 (347)
Q Consensus       229 ~g~~-----~~~~~~~~l~~~G--~~v~~g~  252 (347)
                      .+..     ....+++.++..|  ++|.++.
T Consensus        75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            6631     2334555555554  6777654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.47  E-value=0.038  Score=54.44  Aligned_cols=75  Identities=20%  Similarity=0.431  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh---------------------hHHHHHhcCCcEEEeCCC-CCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE---------------------KIKFLKSLGVDHVVDLSN-ESV  206 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~v~~~~~-~~~  206 (347)
                      .+++|+|+|+ |+.|+.++..+...|++|+++++.+.                     +.+.++++|.+...+..- .+.
T Consensus       326 ~~~~VaIIGa-GpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        326 SDKRVAIIGA-GPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            5789999999 99999999999999999999987532                     345567778654443221 111


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                        ..+..     ...||.+|.++|.
T Consensus       405 --~~~~~-----~~~~DavilAtGa  422 (654)
T PRK12769        405 --SLESL-----LEDYDAVFVGVGT  422 (654)
T ss_pred             --CHHHH-----HhcCCEEEEeCCC
Confidence              01211     1369999999885

>PLN00203 glutamyl-tRNA reductase

Probab=95.47  E-value=0.14  Score=48.47  Aligned_cols=72  Identities=22%  Similarity=0.359  Sum_probs=50.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+. +++...+ ...  .    ........  ..+|+||.
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~--~----~~dl~~al--~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYK--P----LDEMLACA--AEADVVFT  335 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Eee--c----HhhHHHHH--hcCCEEEE
Confidence            679999999 9999999999999997 7999999998876665 4532111 110  1    11122222  46899999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      |++.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            9876

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.16  Score=44.32  Aligned_cols=95  Identities=23%  Similarity=0.273  Sum_probs=67.2

Q ss_pred             ccCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHhcCCcEEEeCCCCC
Q 019049          128 AALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFLKSLGVDHVVDLSNES  205 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~~~~g~~~v~~~~~~~  205 (347)
                      ..+||+....+..|. ..++ -.|++|+|+|-++.+|.-++.++...|+.|++.. ++++                    
T Consensus       136 ~~~PcTp~ai~~ll~-~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------  194 (296)
T PRK14188        136 ALVPCTPLGCMMLLR-RVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------  194 (296)
T ss_pred             CCcCCCHHHHHHHHH-HhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC--------------------
Confidence            346776666665553 3343 4799999999889999999999999999999884 4321                    


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEeecC
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~  254 (347)
                          .++..     ...|+|+-++|.+.+ ..  .+++++..++.+|...
T Consensus       195 ----l~e~~-----~~ADIVIsavg~~~~v~~--~~lk~GavVIDvGin~  233 (296)
T PRK14188        195 ----LPAVC-----RRADILVAAVGRPEMVKG--DWIKPGATVIDVGINR  233 (296)
T ss_pred             ----HHHHH-----hcCCEEEEecCChhhcch--heecCCCEEEEcCCcc
Confidence                11111     357999999997543 33  3489999999988643

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.41  E-value=0.42  Score=39.76  Aligned_cols=98  Identities=18%  Similarity=0.222  Sum_probs=60.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ...+++++++||-.|+  +.|..+..+++. +.+|+.++.+++..+.+++    .|...+ +....+.   .+.   ...
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d~---~~~---~~~  141 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHL-VRRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGDG---WKG---WPA  141 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHH-hCEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECCc---ccC---CCc
Confidence            5677889999999997  335555555554 3589999998876655543    343221 1111111   000   011


Q ss_pred             CCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049          219 LKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  250 (347)
                      ...||.|+..... .....+.+.|+++|+++..
T Consensus       142 ~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        142 YAPFDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             CCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence            2579998865543 3346678999999998865

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.39  E-value=0.14  Score=40.56  Aligned_cols=35  Identities=23%  Similarity=0.432  Sum_probs=29.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~  185 (347)
                      .+++|.|++|++|..++..+...|+ .|+.+.+++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~   36 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP   36 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence            3689999999999999998888887 6777777654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12320 hypothetical protein; Provisional

Probab=95.38  E-value=0.68  Score=45.58  Aligned_cols=90  Identities=19%  Similarity=0.183  Sum_probs=55.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|||+|++|-+|..+++.+...|.+|+++++.+...   ...+.+.+. |..+.       .+.+..  .++|+||.+++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~-------~l~~al--~~~D~VIHLAa   69 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNP-------VLQELA--GEADAVIHLAP   69 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCH-------HHHHHh--cCCCEEEEcCc
Confidence            699999999999999999999999999999765421   111222221 11111       122222  36899999987


Q ss_pred             ccc----------hHHHHhccccCC-EEEEEeec
Q 019049          231 GKL----------TKESLKLLNWGA-QILVIGFA  253 (347)
Q Consensus       231 ~~~----------~~~~~~~l~~~G-~~v~~g~~  253 (347)
                      ...          ..++++.++..| +++.++..
T Consensus        70 ~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~  103 (699)
T PRK12320         70 VDTSAPGGVGITGLAHVANAAARAGARLLFVSQA  103 (699)
T ss_pred             cCccchhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence            421          223455554444 77766643

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.38  E-value=0.12  Score=45.73  Aligned_cols=87  Identities=23%  Similarity=0.298  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++.+|.+|++.+++..+..     +...+.  ...+    +++++     ...|+|+.+
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~--~~~~----l~e~l-----~~aDvvv~~  197 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA--GREE----LSAFL-----SQTRVLINL  197 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec--cccc----HHHHH-----hcCCEEEEC
Confidence            5789999999 99999999999999999999987654321     222111  1111    22222     356999888


Q ss_pred             CCc-c----ch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-K----LT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-~----~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      ... +    .+ ...++.|+++..++.++.
T Consensus       198 lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        198 LPNTPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CCCCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            874 2    22 457889999988887763

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.38  E-value=0.075  Score=46.91  Aligned_cols=92  Identities=18%  Similarity=0.221  Sum_probs=59.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh---hHHHHHHHhcCCcccEEEeC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP---SVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +|+|+|+ |.+|.+.+..+...|.+|+++++++++.+.+++.|...  +  +.+...   ......   ....+|++|-|
T Consensus         2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~~~---~~~~~d~vila   73 (304)
T PRK06522          2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRL--E--DGEITVPVLAADDPA---ELGPQDLVILA   73 (304)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcc--c--CCceeecccCCCChh---HcCCCCEEEEe
Confidence            5899999 99999999888888999999999888777777666421  1  000000   000000   11578999999


Q ss_pred             CCccchHHHHhcc----ccCCEEEEEe
Q 019049          229 VGGKLTKESLKLL----NWGAQILVIG  251 (347)
Q Consensus       229 ~g~~~~~~~~~~l----~~~G~~v~~g  251 (347)
                      +.......++..+    .++..++.+.
T Consensus        74 ~k~~~~~~~~~~l~~~l~~~~~iv~~~  100 (304)
T PRK06522         74 VKAYQLPAALPSLAPLLGPDTPVLFLQ  100 (304)
T ss_pred             cccccHHHHHHHHhhhcCCCCEEEEec
Confidence            9875555544433    3444566543

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.16  Score=43.22  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=31.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ++++|.|++|++|...++.+...|++|+++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            4799999999999999999988999999999876

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.36  E-value=0.69  Score=40.53  Aligned_cols=40  Identities=20%  Similarity=0.184  Sum_probs=34.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  191 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~  191 (347)
                      ++|.|+|+ |.+|...++.+...|.+|++.+.++++.+.++
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~   43 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK   43 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence            57999999 99999999998888999999999988766553

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.35  E-value=0.23  Score=43.87  Aligned_cols=98  Identities=12%  Similarity=0.093  Sum_probs=65.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEecChhhHHHHH-hcCCc--EEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKV-CGA-TIIAVARGAEKIKFLK-SLGVD--HVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~-~g~-~V~~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ....+++|+|+ |..|.+.+..+.. .+. +|.+..+++++.+.+. ++...  .+. .  .+    .++..     ..+
T Consensus       123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~--~~----~~~av-----~~a  189 (304)
T PRK07340        123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P--LD----GEAIP-----EAV  189 (304)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E--CC----HHHHh-----hcC
Confidence            35679999999 9999998888764 565 7999999988766543 34311  111 1  11    22222     478


Q ss_pred             cEEEeCCCc--cchHHHHhccccCCEEEEEeecCCCCCCcc
Q 019049          223 DVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPVIP  261 (347)
Q Consensus       223 d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  261 (347)
                      |+|+.|+++  +.+..   .++++-.+..+|.........+
T Consensus       190 DiVitaT~s~~Pl~~~---~~~~g~hi~~iGs~~p~~~El~  227 (304)
T PRK07340        190 DLVVTATTSRTPVYPE---AARAGRLVVAVGAFTPDMAELA  227 (304)
T ss_pred             CEEEEccCCCCceeCc---cCCCCCEEEecCCCCCCcccCC
Confidence            999999886  44543   3788889998887765444444

>PLN02240 UDP-glucose 4-epimerase

Probab=95.33  E-value=0.12  Score=46.54  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=30.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      +++|+|.|++|.+|..+++.+...|++|+++++.
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999988889999998754

>PRK10637 cysG siroheme synthase; Provisional

Probab=95.33  E-value=0.13  Score=48.29  Aligned_cols=93  Identities=12%  Similarity=0.036  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|||+|| |.++.-=++.+...|++|++++..-. +...+.+.|.-   .+....+.   ...     -.++++||-
T Consensus        11 ~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i---~~~~~~~~---~~d-----l~~~~lv~~   78 (457)
T PRK10637         11 RDRDCLLVGG-GDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGML---TLVEGPFD---ESL-----LDTCWLAIA   78 (457)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCE---EEEeCCCC---hHH-----hCCCEEEEE
Confidence            5789999999 88888777777778999999876432 23333333321   22222331   111     147899999


Q ss_pred             CCCccch-HHHHhccccCCEEEEEeec
Q 019049          228 PVGGKLT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       228 ~~g~~~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      +++++.+ ..+....+..|.++.+...
T Consensus        79 at~d~~~n~~i~~~a~~~~~lvN~~d~  105 (457)
T PRK10637         79 ATDDDAVNQRVSEAAEARRIFCNVVDA  105 (457)
T ss_pred             CCCCHHHhHHHHHHHHHcCcEEEECCC
Confidence            9998655 4566677777888776543

>PLN02686 cinnamoyl-CoA reductase

Probab=95.33  E-value=0.16  Score=46.23  Aligned_cols=44  Identities=18%  Similarity=0.190  Sum_probs=36.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  191 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~  191 (347)
                      ..+++|||+|++|.+|..++..+...|++|+++.++.++.+.++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            45789999999999999999999999999998888766544443

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.32  E-value=0.15  Score=49.55  Aligned_cols=93  Identities=13%  Similarity=0.115  Sum_probs=70.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++|+|.|. |.+|...++.++..|.++++++.++++.+.+++.|...++ .+..     ..+.++..+-..+|.++-+++
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat-----~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY-GDAT-----QLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEE-eeCC-----CHHHHHhcCCccCCEEEEEeC
Confidence            58999999 9999999999999999999999999999999998865433 2222     235666667778999999998


Q ss_pred             ccchH----HHHhccccCCEEEEE
Q 019049          231 GKLTK----ESLKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~~~~----~~~~~l~~~G~~v~~  250 (347)
                      ++..+    ...+...|.-+++..
T Consensus       474 d~~~n~~i~~~~r~~~p~~~IiaR  497 (601)
T PRK03659        474 EPEDTMKIVELCQQHFPHLHILAR  497 (601)
T ss_pred             CHHHHHHHHHHHHHHCCCCeEEEE
Confidence            74332    234555666666654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=95.29  E-value=0.059  Score=47.07  Aligned_cols=60  Identities=20%  Similarity=0.287  Sum_probs=42.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||.|++|.+|..+++.+...|.+|++++++.              .|..+      .+.+.....+..+|+|+++++.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~--------------~d~~~------~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ--------------LDLTD------PEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc--------------cCCCC------HHHHHHHHHhCCCCEEEECCcc
Confidence            489999999999999999998999999998741              12222      1222233333457999988863

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.29  E-value=0.17  Score=45.30  Aligned_cols=96  Identities=21%  Similarity=0.105  Sum_probs=64.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eC-C--C-CCchhhHHHHHHHhcCCcccEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DL-S--N-ESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~-~--~-~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      -+|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+...+.+... .. .  . ........+.   .  ...|+|
T Consensus         5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~---~--~~aD~V   78 (328)
T PRK14618          5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEA---L--AGADFA   78 (328)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHH---H--cCCCEE
Confidence            37999999 9999999999988999999999988877777654311100 00 0  0 0000001111   1  367999


Q ss_pred             EeCCCccchHHHHhccccCCEEEEEee
Q 019049          226 YDPVGGKLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       226 ~d~~g~~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      +-|+.+......+..++++-.++.+..
T Consensus        79 i~~v~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         79 VVAVPSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             EEECchHHHHHHHHhcCcCCEEEEEee
Confidence            999998777888888888766666643

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.28  E-value=0.15  Score=48.14  Aligned_cols=70  Identities=19%  Similarity=0.269  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+++++|.|+ |++|.+++..+...|++|++..++.++.+.+. .++.. .++..         ...   .-..+|++++
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---------~~~---~l~~~DiVIn  396 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---------SLP---ELHRIDIIIN  396 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---------Hhc---ccCCCCEEEE
Confidence            4679999998 99999999999999999999999887766554 33321 11111         110   1246899999


Q ss_pred             CCCcc
Q 019049          228 PVGGK  232 (347)
Q Consensus       228 ~~g~~  232 (347)
                      |++..
T Consensus       397 atP~g  401 (477)
T PRK09310        397 CLPPS  401 (477)
T ss_pred             cCCCC
Confidence            98753

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.28  E-value=0.21  Score=44.11  Aligned_cols=44  Identities=20%  Similarity=0.270  Sum_probs=38.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD  196 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~  196 (347)
                      +|.|+|. |.+|...++-+...|.+|++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~   45 (301)
T PRK09599          2 QLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGAT   45 (301)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCe
Confidence            5889998 9999999888888899999999999988887777643

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.26  Score=43.08  Aligned_cols=95  Identities=17%  Similarity=0.200  Sum_probs=67.3

Q ss_pred             ccCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          128 AALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      ..+||+......-|. ..++ -.|++|.|+|.++.+|.-.+.++...|++|++..+...                   + 
T Consensus       137 ~~~PcTp~aii~lL~-~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------------~-  195 (301)
T PRK14194        137 VLTPCTPSGCLRLLE-DTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------------D-  195 (301)
T ss_pred             CCCCCcHHHHHHHHH-HhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------------C-
Confidence            345666665555553 3343 36999999999779999999999999999999865422                   1 


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEeec
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                         .++..     ...|+|+-++|.+.+ ...  +++++..++.+|..
T Consensus       196 ---l~e~~-----~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin  233 (301)
T PRK14194        196 ---AKALC-----RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN  233 (301)
T ss_pred             ---HHHHH-----hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence               22222     357999999997543 332  38999999998854

>PRK08309 short chain dehydrogenase; Provisional

Probab=95.26  E-value=1.3  Score=35.74  Aligned_cols=90  Identities=16%  Similarity=0.058  Sum_probs=52.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCC---cEE--EeCCCCCchhhHHHHHHHh--cCCccc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV---DHV--VDLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~---~~v--~~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      +++|.|++ ++|..+++.+...|++|+++.+++++.+.+.. ++.   ...  .|..+.+-   +....+..  ..+++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~s---v~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDA---LKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHH---HHHHHHHHHHHcCCCe
Confidence            58999996 56656777777789999999998876655433 321   111  23333222   23333221  234789


Q ss_pred             EEEeCCCccchHHHHhccccCC
Q 019049          224 VLYDPVGGKLTKESLKLLNWGA  245 (347)
Q Consensus       224 ~v~d~~g~~~~~~~~~~l~~~G  245 (347)
                      .+|+.+-...-.......+..|
T Consensus        78 ~lv~~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         78 LAVAWIHSSAKDALSVVCRELD   99 (177)
T ss_pred             EEEEeccccchhhHHHHHHHHc
Confidence            9998876554444444444444

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.23  E-value=0.22  Score=39.05  Aligned_cols=86  Identities=24%  Similarity=0.266  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+++|.|+|- |+-|.+.++-+|-.|.+|++..+..+ ..+.+++.|+...      +    ..+..     ...|+|+-
T Consensus         3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~------~----~~eAv-----~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM------S----VAEAV-----KKADVVML   66 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC------E----HHHHH-----HC-SEEEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec------c----HHHHH-----hhCCEEEE
Confidence            5789999999 99999999999999999999988776 6788888886432      1    22222     25799998


Q ss_pred             CCCcc----ch-HHHHhccccCCEEEEE
Q 019049          228 PVGGK----LT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       228 ~~g~~----~~-~~~~~~l~~~G~~v~~  250 (347)
                      .+.++    .+ +.....|+++-.+++.
T Consensus        67 L~PD~~q~~vy~~~I~p~l~~G~~L~fa   94 (165)
T PF07991_consen   67 LLPDEVQPEVYEEEIAPNLKPGATLVFA   94 (165)
T ss_dssp             -S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred             eCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence            88874    33 4455678888777763

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.23  E-value=0.18  Score=48.68  Aligned_cols=92  Identities=15%  Similarity=0.204  Sum_probs=65.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++++|.|. |.+|...++.++..|.++++++.++++.+.+++.|...+.. +..     .++.++..+-+.+|.++-+++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~G-D~~-----~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLG-NAA-----NEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEc-CCC-----CHHHHHhcCccccCEEEEEcC
Confidence            68999999 99999999999999999999999999999999888654432 222     234555556678898887776


Q ss_pred             ccch----HHHHhccccCCEEEE
Q 019049          231 GKLT----KESLKLLNWGAQILV  249 (347)
Q Consensus       231 ~~~~----~~~~~~l~~~G~~v~  249 (347)
                      ++.-    -...+...+.-+++.
T Consensus       491 ~~~~~~~iv~~~~~~~~~~~iia  513 (558)
T PRK10669        491 NGYEAGEIVASAREKRPDIEIIA  513 (558)
T ss_pred             ChHHHHHHHHHHHHHCCCCeEEE
Confidence            5322    122344444555554

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.19  E-value=0.24  Score=43.35  Aligned_cols=38  Identities=21%  Similarity=0.325  Sum_probs=34.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      ++|.|+|+ |.+|.-.++.+...|.+|++.+.++++.+.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            48999999 999999998888889999999999997765

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.19  E-value=0.13  Score=50.18  Aligned_cols=93  Identities=16%  Similarity=0.206  Sum_probs=68.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      .++|+|.|. |.+|...++.++..|.++++++.++++.+.+++.|... +..+..     -.++++..+-..+|.++-++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v-~~GDat-----~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKV-FYGDAT-----RMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeE-EEEeCC-----CHHHHHhcCCCcCCEEEEEe
Confidence            358999999 99999999999999999999999999999999988653 332322     23456666667899999999


Q ss_pred             CccchH----HHHhccccCCEEEE
Q 019049          230 GGKLTK----ESLKLLNWGAQILV  249 (347)
Q Consensus       230 g~~~~~----~~~~~l~~~G~~v~  249 (347)
                      +++..+    ...+.+.|.-+++.
T Consensus       473 ~d~~~n~~i~~~ar~~~p~~~iia  496 (621)
T PRK03562        473 DDPQTSLQLVELVKEHFPHLQIIA  496 (621)
T ss_pred             CCHHHHHHHHHHHHHhCCCCeEEE
Confidence            874322    23344455545444

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.18  E-value=0.095  Score=44.21  Aligned_cols=73  Identities=23%  Similarity=0.352  Sum_probs=47.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+++++|.|++|++|...+..+...|++|++++++.....    .+....+..   ++.+..+++.+..  +.+|+++++
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~---D~~~~~~~~~~~~--~~id~lv~~   74 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQL---DLSDDLEPLFDWV--PSVDILCNT   74 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEEC---ChHHHHHHHHHhh--CCCCEEEEC
Confidence            4679999999999999999988889999999988654211    010111111   1211123333332  468999998


Q ss_pred             CC
Q 019049          229 VG  230 (347)
Q Consensus       229 ~g  230 (347)
                      +|
T Consensus        75 ag   76 (235)
T PRK06550         75 AG   76 (235)
T ss_pred             CC
Confidence            87

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.091  Score=43.11  Aligned_cols=64  Identities=25%  Similarity=0.414  Sum_probs=44.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +++|.|+++++|..++..+... ++|+++++++.          ....|..+.+.   .+...+..  +++|++++++|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~---~~~~~~~~--~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPAS---IRALFEKV--GKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHH---HHHHHHhc--CCCCEEEECCCC
Confidence            6899999999999988777666 89999988653          12234444332   44444433  468999998873

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=95.15  E-value=0.022  Score=49.83  Aligned_cols=67  Identities=22%  Similarity=0.220  Sum_probs=45.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      |||+|++|.+|..+++.+...|++|++++++..+.......+   +.+.....    .   .+.  -.++|+|+.+++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~----~---~~~--~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLA----E---SEA--LEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccc----h---hhh--cCCCCEEEECCCC
Confidence            689999999999999999889999999999876543222111   11111111    1   111  2468999999874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	347
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		7e-31
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-22
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		1e-20
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		5e-20
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		7e-20
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-18
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		7e-18
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-16
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		2e-16
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		5e-16
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		8e-16
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		9e-16
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		2e-15
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-15
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		7e-15
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		8e-15
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-14
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-14
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		3e-14
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		5e-14
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		6e-14
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		2e-13
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		9e-12
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		1e-11
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		3e-11
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		5e-11
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		5e-11
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		9e-10
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		4e-09
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		6e-09
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		6e-09
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		7e-09
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		8e-09
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		1e-08
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-08
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		9e-08
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		1e-07
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		3e-07
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		4e-07
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-07
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		6e-07
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		6e-07
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		2e-06
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-06
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-06
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		5e-06
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		5e-06
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		6e-06
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		1e-05
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		3e-05
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		3e-05
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		8e-05
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		1e-04
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		3e-04
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		5e-04
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		6e-04
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		9e-04

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score =  131 bits (329), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V V VKA  + + +YL   G+YQ K   PFVPG + +G V +  P  S  K GD V  F 
Sbjct: 51  VVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSA-PEGSGIKPGDRVMAFN 109
Query: 100 ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
            +G +A+ +    S + P P   D   A AL   + T + A   R QL +G+        
Sbjct: 110 FIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAA 169
Query: 160 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
                   QI K  GA +IAV       +F+KS+G D V+ L  E    +V+E   A   
Sbjct: 170 GGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL-EEGWAKAVRE---ATGG 225
Query: 220 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 279
            GVD++ DP+GG    ++++ L    ++LV+GFA+G IP I  N  L++N ++ G+ WG 
Sbjct: 226 AGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGE 285
Query: 280 YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           +       L ++   L    A+G+    +S     SE   A     D KV GK+++
Sbjct: 286 FLRTHADYLYETQAGLEKLVAEGM-RPPVSARIPLSEGRQALQDFADGKVYGKMVL 340

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 149/363 (41%), Gaps = 51/363 (14%)
Query: 1   MEALVCRKLGDPTV-SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A+V R  G P V  + D   P      EP P+      VRVR+KA +LN+ +     G
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVP------EPGPK-----EVRVRLKAAALNHLDVWVRKG 49
Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGFAAL----------- 101
               K PLP V G+D SG VDAVGP V  F  GD V       CG               
Sbjct: 50  VASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109
Query: 102 ---------GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX 152
                    G++A+++V  ++ L P PK      AAA+P+ F T+   +V +  +  G  
Sbjct: 110 YQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDD 169
Query: 153 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
                          QI K+ GA +IA A   +K++  K+LG D  V+ ++      V+ 
Sbjct: 170 VLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRR 229
Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
                  KG D + D  G    +  +K    G +I + G +SG    +P      +  ++
Sbjct: 230 LTGG---KGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI 286
Query: 273 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
            G    S         +  L  +L +  +G +   +        A      +E+R+V GK
Sbjct: 287 LGSTMAS---------KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGK 337
Query: 333 VMI 335
           V++
Sbjct: 338 VVL 340

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 35/335 (10%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V ++LG P   +             P P+      V +RV+A  LN+A++L  LG 
Sbjct: 1   MKAWVLKRLGGPLELVDL-----------PEPEAEEGEVV-LRVEAVGLNFADHLMRLGA 48
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           Y  +   PF+PG +  G V+           G         G  A+ +   +  L P+P+
Sbjct: 49  YLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPE 97
Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 180
           G     AAA PV+F T+++AL  RAQ   G+                Q+ +  G  ++A 
Sbjct: 98  GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156
Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           A   EK+    +LG +     +    +P      +A+   G+D++ + V GK  +ESL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAE---VPE-----RAKAWGGLDLVLE-VRGKEVEESLGL 207
Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L  G +++ IG A GE+  IP    + +N  V G +W +  +    ++E++L  LL    
Sbjct: 208 LAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 266
Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           + L  + +   +  +EA  AF A+ DR   GKV++
Sbjct: 267 RELRPV-VGPVFPFAEAEAAFRALLDRGHTGKVVV 300

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           PIP+ +    V ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S F
Sbjct: 53  PIPKDHQ---VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 109
Query: 90  KVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
           K GD V   + + G +A++ +A    ++ +P+  D    AA+ + + T++ AL+H A + 
Sbjct: 110 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 169
Query: 149 SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 208
           +G+                QI +  G  I+  A   E  K +   G   V +    + I 
Sbjct: 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYID 229
Query: 209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 263
            +K+++     KG+D++ + +      + L LL+ G +++V+G + G I + P +
Sbjct: 230 KIKKYVGE---KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG-SRGTIEINPRD 280

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 137/317 (43%), Gaps = 25/317 (7%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVP--GSDYSGTVDAVGPNVS 87
           P+P +     V VR +A  +N  +  Q  G Y   PP    P  G + SG +  VGP VS
Sbjct: 49  PLP-VAGEGEVLVRAEAIGVNRPDIAQRQGSY--PPPKDASPILGLELSGEIVGVGPGVS 105
Query: 88  NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 147
            + VGD VCG A  G++A++ +    ++ P PKG D + AAALP  F T    L   A L
Sbjct: 106 GYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGL 165
Query: 148 SSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
           + G+                Q+ +  GA + A A    K +  + LG    ++  +E   
Sbjct: 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSE--- 222
Query: 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA-- 265
                 +KA   +GVD++ D +G    + ++  L     + +I F  G +     N++  
Sbjct: 223 -DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV-AEKVNLSPI 280
Query: 266 LVKNWTVHGLYWGSYKIHRPHVLED--SLRELLL---WA--AKGLITIHISHTYSPSEAN 318
            VK  TV G         RP   E+  ++R+ LL   W     G +   I   ++  +  
Sbjct: 281 XVKRLTVTG------STXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA 334
Query: 319 LAFSAIEDRKVIGKVMI 335
            A   +E+   +GKV +
Sbjct: 335 DAHRLLEEGSHVGKVXL 351

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 140/319 (43%), Gaps = 30/319 (9%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ-EKPPLPFVPGSDYSGTVDAVGPNVSN 88
           P+P + S   + ++ K T +NY       G Y  EKP   +V G + SGTV A G  V+N
Sbjct: 29  PVPSI-SEEELLIKNKYTGVNYIESYFRKGIYPCEKP---YVLGREASGTVVAKGKGVTN 84
Query: 89  FKVGDTVCGFAALGSFAQFI-VADQSELFPVPKGCD-----LLAAAALPVAFGTSHVALV 142
           F+VGD V  + +  +FAQ+  ++ Q  +  +PKG       L AA  L V    S     
Sbjct: 85  FEVGDQVA-YISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEA 143
Query: 143 HRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 202
           +   +  G                 Q+ K+ GA  IAVA   EK+K  K  G +++++ S
Sbjct: 144 Y--HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINAS 201
Query: 203 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP---- 258
            E ++  V +F      KGVD  +D VG    + SL  L      +  G ASG IP    
Sbjct: 202 KEDILRQVLKFTNG---KGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSI 258
Query: 259 --VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316
             + P NI LV+   ++G       I  P   +    E         + I I  TY   +
Sbjct: 259 TRLSPKNITLVRP-QLYGY------IADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRD 311
Query: 317 ANLAFSAIEDRKVIGKVMI 335
              A + IE RK +GK+++
Sbjct: 312 YRTAAADIESRKTVGKLVL 330

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 139/350 (39%), Gaps = 46/350 (13%)
Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           TV+ HD K         P+P+      + VR  A SLNY + L +          PFVP 
Sbjct: 35  TVAPHDLKL-----AERPVPEAGEHDII-VRTLAVSLNYRDKLVLETGXGLDLAFPFVPA 88
Query: 73  SDYSGTVDAVGPNVSNFKVGDTV------------------------CGFAALGSFAQFI 108
           SD SG V+AVG +V+ F+ GD V                         G A  G  ++++
Sbjct: 89  SDXSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYV 148
Query: 109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQ 168
           V  +      PK  D   A+ LP A  T+  ALV +  L +G                 Q
Sbjct: 149 VLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGD-RVVVQGTGGVALFGLQ 207
Query: 169 IGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228
           I K  GA +I  +   EK+    +LG DH ++   E  +  V      R   G D + + 
Sbjct: 208 IAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDR---GADHILEI 264
Query: 229 VGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 288
            GG    +SLK +    +I VIG   G     P    L+K+  V G+  G    HR   L
Sbjct: 265 AGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVG----HR-RAL 319
Query: 289 EDSLRELLLWAAKGLITIHISHTYSPSE-ANLAFSAIEDRKVIGKVMIAF 337
           ED +  +     K +I      T  P   A+L      DR   GKV+I F
Sbjct: 320 EDLVGAVDRLGLKPVIDXRYKFTEVPEALAHL------DRGPFGKVVIEF 363

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 150/335 (44%), Gaps = 42/335 (12%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V ++LG P   +             P P+      V +RV+A  LN+A++L  LG 
Sbjct: 1   MKAWVLKRLGGPLELVDL-----------PEPEAEEGEVV-LRVEAVGLNFADHLMRLGA 48
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           Y  +   PF+PG +  G V+           G         G  A+ +   +  L P+P+
Sbjct: 49  YLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPE 97
Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 180
           G     AAA PV+F T+++AL  RAQ   G+                Q+ +  G  ++A 
Sbjct: 98  GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156
Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           A   EK+    +LG +     +    +P      +A+   G+D++ + V GK  +ESL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAE---VPE-----RAKAWGGLDLVLE-VRGKEVEESLGL 207
Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L  G +++ I       P+ P  + + +N  V G +W +  +    ++E++L  LL    
Sbjct: 208 LAHGGRLVYIA------PIPPLRL-MRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 259
Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           + L  + +   +  +EA  AF A+ DR   GKV++
Sbjct: 260 RELRPV-VGPVFPFAEAEAAFRALLDRGHTGKVVV 293

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 145/337 (43%), Gaps = 27/337 (8%)
Query: 16  IHDEKSPIVLSK-TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QEKPPLPFVPGS 73
           + +   P VL K   P P   +   V V+++A+  N  +     G+    + PLP + G 
Sbjct: 13  VEEANGPFVLRKLARPQP---APGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGX 69
Query: 74  DYSGTVDAVGPNVSNFKVGDTVCGFAA-----LGSFAQFIVADQSELFPVPKGCDLLAAA 128
           D +GTV AVGP V +F+VGD V G         G+ AQF   D   L   P       A+
Sbjct: 70  DLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQAS 129
Query: 129 ALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIK 188
            LP+ F T+   LV RAQ+  GQ                QI    GA + A ARG++ ++
Sbjct: 130 VLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSD-LE 188
Query: 189 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL-NWGAQI 247
           +++ LG    +D S E    + +        +G D++YD +GG +   S   +  +G  +
Sbjct: 189 YVRDLGATP-IDASREPEDYAAEHTAG----QGFDLVYDTLGGPVLDASFSAVKRFGHVV 243
Query: 248 LVIGFASGEIPVIPANIALVKN-WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 306
             +G+ + ++  +    A     +T+H L       H      + LRE       G +  
Sbjct: 244 SCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAH----FGEXLREADALVQTGKLAP 299
Query: 307 HIS-HTYSPSEANLAFSAIEDRKVI----GKVMIAFD 338
            +   T+S +E   A+ A+  R  +    GK+ I  +
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 24/306 (7%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P P+      V +RV+A  LN+A++L  LG Y  +   PF+PG +  G V+         
Sbjct: 19  PEPEAEEGEVV-LRVEAVGLNFADHLXRLGAYLTRLHPPFIPGXEVVGVVEG-------- 69
Query: 90  KVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 149
                       G  A+ +   +  L P+P+G     AAA PV+F T+++AL  RAQ   
Sbjct: 70  ---RRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLAL-KRAQARP 125
Query: 150 GQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 209
           G+                Q+ +  G  ++A A   EK+    +LG +     +    +P 
Sbjct: 126 GEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPLALGAEEAATYAE---VPE 182
Query: 210 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKN 269
                +A+   G+D++ + V GK  +ESL LL  G +++ IG A GE+  IP      +N
Sbjct: 183 -----RAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLXRRN 236
Query: 270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV 329
             V G +W +  +    ++E++L  LL    + L  + +   +  +EA  AF A+ DR  
Sbjct: 237 LAVLG-FWLTPLLREGALVEEALGFLLPRLGRELRPV-VGPVFPFAEAEAAFRALLDRGH 294
Query: 330 IGKVMI 335
            GKV++
Sbjct: 295 TGKVVV 300

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 13/264 (4%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GF 98
           VRV++ A  +N ++   I G Y   P LP V G++    V AVG NV+  K GD V    
Sbjct: 57  VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPAN 116
Query: 99  AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 158
           A LG++    V  +  L  VP    L +AA L V   T++  L+   QL  G        
Sbjct: 117 AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS 176
Query: 159 XXXXXXXXXQIGKVCGATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFL 214
                    QI    G   I V R    I+     LKSLG +HV+    E   P +K F 
Sbjct: 177 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVIT-EEELRRPEMKNFF 235
Query: 215 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 274
           K   +    +  + VGGK + E L+ L  G  ++  G  + +  V   ++ + K+  + G
Sbjct: 236 K--DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG 293
Query: 275 LYWGSYKI-HRPHVLEDSLRELLL 297
            +   +K  H P    D  +EL+L
Sbjct: 294 FWLSQWKKDHSP----DQFKELIL 313

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 13/264 (4%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GF 98
           VRV++ A  +N ++   I G Y   P LP V G++    V AVG NV+  K GD V    
Sbjct: 44  VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPAN 103
Query: 99  AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 158
           A LG++    V  +  L  VP    L +AA L V   T++  L+   QL  G        
Sbjct: 104 AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS 163
Query: 159 XXXXXXXXXQIGKVCGATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFL 214
                    QI    G   I V R    I+     LKSLG +HV+    E   P +K F 
Sbjct: 164 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVIT-EEELRRPEMKNFF 222
Query: 215 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 274
           K   +    +  + VGGK + E L+ L  G  ++  G  + +  V   ++ + K+  + G
Sbjct: 223 K--DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG 280
Query: 275 LYWGSYKI-HRPHVLEDSLRELLL 297
            +   +K  H P    D  +EL+L
Sbjct: 281 FWLSQWKKDHSP----DQFKELIL 300

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 132/321 (41%), Gaps = 17/321 (5%)
Query: 22  PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVP---GSDYSGT 78
           P VL   +  P+     AV VR KA  LN+ +     G Y    P PF+P   G++ +G 
Sbjct: 13  PEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLY----PAPFLPSGLGAEGAGV 68
Query: 79  VDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTS 137
           V+AVG  V+ FKVGD V  G   LG++++  V  ++ L  +        AAAL +   T 
Sbjct: 69  VEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTV 128
Query: 138 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 197
              L    Q+  G+                Q  K  GA +I      EK    K+LG   
Sbjct: 129 QYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE 188
Query: 198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI 257
            +D S+E V   V E    +K     V+YD VG      SL  +    + LV+ F +   
Sbjct: 189 TIDYSHEDVAKRVLELTDGKKCP---VVYDGVGQDTWLTSLDSV--APRGLVVSFGNASG 243
Query: 258 PVIPANIALV---KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSP 314
           PV   N+ ++    +  V     GSY  +    L+    EL    A G + +     Y+ 
Sbjct: 244 PVSGVNLGILAQKDSVYVTRPTLGSYA-NNAQNLQTMADELFDMLASGKLKVDGIEQYAL 302
Query: 315 SEANLAFSAIEDRKVIGKVMI 335
            +A  A   +  R+  G  ++
Sbjct: 303 KDAAKAQIELSARRTTGSTIL 323

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V
Sbjct: 16  REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 74
Query: 80  DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPK-GCDLLAAAALPVAFGTS 137
            A+G + S  + VG  V  + A GSFA++ V   S   PVP    + L    L V+  T+
Sbjct: 75  VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 130
Query: 138 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 197
           +++L     LS G+                Q+ K     +I      EK  FLKSLG D 
Sbjct: 131 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 190
Query: 198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 256
            ++   E V       LK    +GVDV+Y+ VGG +   ++  L    +++VIGF SG +
Sbjct: 191 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 246
Query: 257 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 289
            P          +PA + L K+ +V G     Y   Y+    H+LE
Sbjct: 247 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 291

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V
Sbjct: 45  REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 103
Query: 80  DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPK-GCDLLAAAALPVAFGTS 137
            A+G + S  + VG  V  + A GSFA++ V   S   PVP    + L    L V+  T+
Sbjct: 104 VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 159
Query: 138 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 197
           +++L     LS G+                Q+ K     +I      EK  FLKSLG D 
Sbjct: 160 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 219
Query: 198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 256
            ++   E V       LK    +GVDV+Y+ VGG +   ++  L    +++VIGF SG +
Sbjct: 220 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 275
Query: 257 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 289
            P          +PA + L K+ +V G     Y   Y+    H+LE
Sbjct: 276 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 320

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V
Sbjct: 37  REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 95
Query: 80  DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPK-GCDLLAAAALPVAFGTS 137
            A+G + S  + VG  V  + A GSFA++ V   S   PVP    + L    L V+  T+
Sbjct: 96  VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 151
Query: 138 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 197
           +++L     LS G+                Q+ K     +I      EK  FLKSLG D 
Sbjct: 152 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 211
Query: 198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 256
            ++   E V       LK    +GVDV+Y+ VGG +   ++  L    +++VIGF SG +
Sbjct: 212 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 267
Query: 257 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 289
            P          +PA + L K+ +V G     Y   Y+    H+LE
Sbjct: 268 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 312

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 27/311 (8%)
Query: 41  RVRVKATSLNYANYLQILGKYQEKPPL-----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
           +VR++ T++   N+L    +     PL     P V G + +  V+ VGP V++F VG+ V
Sbjct: 30  QVRLRNTAIG-VNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERV 88
Query: 96  CG-FAALGSFAQFIVADQSELFPVPKGCDL--LAAAALPVAFGTSHVALVHRAQLSSGQX 152
           C     LG+++Q  +    +L  VPK  DL  +  A L +   T+   L    ++  G  
Sbjct: 89  CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDY 148
Query: 153 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
                             +  GAT+I      EK +  + LG  H ++ S +     V+E
Sbjct: 149 VLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVRE 208
Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
                  KGVDV+YD +G    ++SL  L         G ASG    +   I +V++  V
Sbjct: 209 ITGG---KGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG----VADPIRVVEDLGV 261
Query: 273 HG-------LYWGSYKIHRPHVLEDSLRELLLWAAK-GLITIHISHTYSPSEANLAFSAI 324
            G         W  Y  +R  + E S  + L  A K G++   ++ T+   EA  A   +
Sbjct: 262 RGSLFITRPALW-HYMSNRSEIDEGS--KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYM 318
Query: 325 EDRKVIGKVMI 335
             R+ IG +++
Sbjct: 319 GGRQTIGSIVL 329

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 10  GDPTVSIHDEK--SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL 67
           G P +++H +K   P  L   E          V ++V A++LN A+ +Q  G+Y   P  
Sbjct: 4   GIPMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA 63
Query: 68  PFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLA 126
             + G + SG V  +GP    ++K+GDT       G  AQ++   +  L P+P+G  L  
Sbjct: 64  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQ 123
Query: 127 AAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEK 186
           AAA+P A+ T+   L     + +G                 Q+ ++ GA  +  A   +K
Sbjct: 124 AAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK 183
Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 246
           ++  + LG     +   E    +  +F K     GV+++ D +GG   ++++  L    +
Sbjct: 184 LQMAEKLGAAAGFNYKKEDFSEATLKFTKG---AGVNLILDCIGGSYWEKNVNCLALDGR 240
Query: 247 ILVIGFASG 255
            ++ G   G
Sbjct: 241 WVLYGLMGG 249

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 131/337 (38%), Gaps = 41/337 (12%)
Query: 24  VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVG 83
           +  K  P PQ      +++RVKA  LN+ + +   G     P  P VPG + SG V+A+G
Sbjct: 20  LFRKAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALG 76
Query: 84  PNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH 143
            +V  +++GD V  F    ++A+ +      ++ +P       AAA P+ F T++V L  
Sbjct: 77  DSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFE 136
Query: 144 RAQLSSGQXXXXXXXXXXXXXXXXQI-GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 202
            A L  G                 Q+   V   T+   A   +      S  V H+ D  
Sbjct: 137 VANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDS--VTHLFD-R 193
Query: 203 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPA 262
           N   +  VK        +GVD++ D + G  T + L LL      ++ G ++       +
Sbjct: 194 NADYVQEVKRI----SAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKS 249
Query: 263 NIALVKNWTVHGLYWGSYKIHRPHVLED-------SLRELLLWAAKG---------LITI 306
             +  K+W      W   K++   + E+       SL  LL    +          LI +
Sbjct: 250 FFSFAKSW------WQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGL 303
Query: 307 HISHTYSP--------SEANLAFSAIEDRKVIGKVMI 335
           +      P         E   A   I DR  IGK+++
Sbjct: 304 YNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           VR+ ++A  +N+ + L  LG Y     L    GS+ +G V   GP V+    GD V G  
Sbjct: 241 VRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMI 296
Query: 100 ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
              +F    VAD   +  +P G     AA++P+ F T++ ALV  A L  G+        
Sbjct: 297 P-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA 355
Query: 160 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV-----KEFL 214
                   Q+ +  GA + A    A + K+         V+LS E +  S      ++FL
Sbjct: 356 GGVGMAAIQLARHLGAEVYAT---ASEDKW-------QAVELSREHLASSRTCDFEQQFL 405
Query: 215 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV 259
            A   +GVDV+ + + G+    SL++L  G + L +G      PV
Sbjct: 406 GATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPV 450

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGF 98
           V ++V A++LN A+ +Q  G+Y   P    + G + SG V  +GP    ++K+GDT    
Sbjct: 52  VLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMAL 111
Query: 99  AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 158
              G  AQ++   +  L P+P+G  L  AAA+P A+ T+   L     + +G        
Sbjct: 112 LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAG 171
Query: 159 XXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 218
                    Q+ ++ GA  +  A   +K++  + LG     +   E    +  +F K   
Sbjct: 172 LSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKG-- 229
Query: 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
             GV+++ D +GG   ++++  L    + ++ G   G
Sbjct: 230 -AGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG 265

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 129/335 (38%), Gaps = 20/335 (5%)
Query: 7   RKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPP 66
            K G+P   +  E   I     EP+        V VR+    +N ++ + I G Y  + P
Sbjct: 11  HKFGNPKDVLQVEYKNI-----EPL----KDNEVFVRMLVRPINPSDLIPITGAYAHRIP 61
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLA 126
           LP +PG +  G V+ VG  VS   +G  V      G++ +++      + P+P   D   
Sbjct: 62  LPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFT 121
Query: 127 AAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEK 186
           AA + +   T+ V       L                    Q+ ++    +IAV R  + 
Sbjct: 122 AAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKH 181
Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 246
            + L  LG  +V+D S   +  +V E        G D   D +GG    E    L     
Sbjct: 182 TEELLRLGAAYVIDTSTAPLYETVMELTNG---IGADAAIDSIGGPDGNELAFSLRPNGH 238
Query: 247 ILVIGFASGEIPVIPANI---ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL-LWAAKG 302
            L IG  SG I V  A I   A V     H  +W       P+  +++ R L+ L   + 
Sbjct: 239 FLTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEV--SPYKWQETFRHLIRLVENEQ 295
Query: 303 LITIHISHTYSPSEANLAFSAIED-RKVIGKVMIA 336
           L  + +  TY  ++   A   ++   K  GKV + 
Sbjct: 296 LRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLT 330

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 130/322 (40%), Gaps = 48/322 (14%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGK----YQEKPPLPFVPGSDYSGTVDAVGPN 85
           P P+   +  + ++V A SLN  +Y    G      + K  LP   G D+SG V  +G +
Sbjct: 27  PTPEYRKNQXL-IKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD 85
Query: 86  VSNFKVGDTVCGFAAL----GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVAL 141
           V+N  +GD V G A        +A+++ A    +    +    L AA+LP A G + +  
Sbjct: 86  VNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTA-GLTALQA 144
Query: 142 VHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL 201
           +++A++  G                 Q+ K  G T+I  A       FLK+LG +  ++ 
Sbjct: 145 LNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINY 203
Query: 202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP 261
             E  + ++           VD + D VGG +  +S+  L     I+        +P I 
Sbjct: 204 HEEDFLLAIS--------TPVDAVIDLVGGDVGIQSIDCLKETGCIV-------SVPTIT 248
Query: 262 A----NIALVKNWTVHGLYWGSYKIHRPHVL-----EDSLRELLLWAAKGLITIHISHTY 312
           A     +A  K+    GL    + I   H L     ED LR            I IS  +
Sbjct: 249 AGRVIEVAKQKHRRAFGL-LKQFNIEELHYLGKLVSEDKLR------------IEISRIF 295
Query: 313 SPSEANLAFSAIEDRKVIGKVM 334
             SEA  A   +E   V GK++
Sbjct: 296 QLSEAVTAHELLETGHVRGKLV 317

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 134/336 (39%), Gaps = 29/336 (8%)
Query: 14  VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS 73
           +  H    P VL   E  P   +   ++V  KA  +N+ +     G Y   P LP   G+
Sbjct: 5   IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLY-PPPSLPSGLGT 63
Query: 74  DYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQF--IVADQSELFPVPKGCDLLAAAAL 130
           + +G V  VG  V + K GD V    +ALG+++    I+AD++ + P     +  AA+ L
Sbjct: 64  EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 131 PVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFL 190
                T +  L    ++   +                Q  K  GA +I     A+K +  
Sbjct: 124 KGL--TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA 181
Query: 191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVI 250
              G   V++   E ++  +KE    +K++   V+YD VG    + SL  L     ++  
Sbjct: 182 LKAGAWQVINYREEDLVERLKEITGGKKVR---VVYDSVGRDTWERSLDCLQRRGLMVSF 238
Query: 251 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LEDSLRELLLWAAK 301
           G +SG +  +   I   K         GS  + RP +         L ++  EL    A 
Sbjct: 239 GNSSGAVTGVNLGILNQK---------GSLYVTRPSLQGYITTREELTEASNELFSLIAS 289
Query: 302 GLITIHIS--HTYSPSEANLAFSAIEDRKVIGKVMI 335
           G+I + ++    Y   +A  A   +E R   G  ++
Sbjct: 290 GVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 88  NFKVGDTVCGFAA-----LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV 142
            F+ GD V G        +G    F   D S   P+P+    L    +     T++ AL+
Sbjct: 89  GFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRA-PLPRYLSALGMTGM-----TAYFALL 142
Query: 143 HRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDL 201
              Q  +G+                QI ++ G  ++ +A GAEK +FL + LG D  +D 
Sbjct: 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDY 202
Query: 202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEI 257
            NE +       LK    KG+DV +D VGG++    L  + + A+I++ G    + + E 
Sbjct: 203 KNEDLAAG----LKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEA 258
Query: 258 PVIPANI--ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 302
              PAN    LV    + G+    Y    P    + L+E+  W A+G
Sbjct: 259 VRGPANYLSLLVNRARMEGMVVMDYAQRFP----EGLKEMATWLAEG 301

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 139/349 (39%), Gaps = 49/349 (14%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+ + + E  P + S   V VR+KA  + + +     G +  KP LP +PG +  G V
Sbjct: 10  KEPLKIKEVEK-PTI-SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67
Query: 80  DAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFIVAD 111
           + VGP V++ KVGD                      T+C      G++  G +A++  A 
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK 171
              +  +P       AA +  A  T++ AL  +   +                   Q  K
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKAL--KVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 172 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
             G  ++AV  G EK++  K LG D VV+   E     +KE +       V  +  P   
Sbjct: 186 AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA-- 243
Query: 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
              + +   +  G   +++G    E+P IP    ++    + G   G+ K          
Sbjct: 244 --FQSAYNSIRRGGACVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------D 291
Query: 292 LRELLLWAAKGLITIHISHTYSPSEA-NLAFSAIEDRKVIGKVMIAFDD 339
           L+E L +AA+G +   I     P E  N  F  +   ++ G+V++  +D
Sbjct: 292 LQEALQFAAEGKVKTIIE--VQPLEKINEVFDRMLKGQINGRVVLTLED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 139/349 (39%), Gaps = 49/349 (14%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+ + + E  P + S   V VR+KA  + + +     G +  KP LP +PG +  G V
Sbjct: 10  KEPLKIKEVEK-PTI-SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67
Query: 80  DAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFIVAD 111
           + VGP V++ KVGD                      T+C      G++  G +A++  A 
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK 171
              +  +P       AA +  A  T++ AL  +   +                   Q  K
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKAL--KVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 172 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
             G  ++AV  G EK++  K LG D VV+   E     +KE +       V  +  P   
Sbjct: 186 AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA-- 243
Query: 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
              + +   +  G   +++G    E+P IP    ++    + G   G+ K          
Sbjct: 244 --FQSAYNSIRRGGACVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------D 291
Query: 292 LRELLLWAAKGLITIHISHTYSPSEA-NLAFSAIEDRKVIGKVMIAFDD 339
           L+E L +AA+G +   I     P E  N  F  +   ++ G+V++  +D
Sbjct: 292 LQEALQFAAEGKVKTIIE--VQPLEKINEVFDRMLKGQINGRVVLTLED 338

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 143/354 (40%), Gaps = 51/354 (14%)
Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGS 73
           +H+   P+ +   +  P+L     V VR+    + + +   + G + E  +P LP+  G 
Sbjct: 21  LHEYNKPLRIEDVD-YPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGH 79
Query: 74  DYSGTVDAVGPNVSNFKVGDTV---------------------C------GFAALGSFAQ 106
           +  G ++ V   V   + GD V                     C      G    G FA+
Sbjct: 80  ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAE 139
Query: 107 FIVADQSELFPVPKGCD---LLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXX 163
           F+      +  +PK      L+  A L  A  T++ A+   A+                 
Sbjct: 140 FMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLG 199
Query: 164 XXXXQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV 222
               Q+ KV   AT+IA+    EK+K  + LG DHVVD   +     VK+ ++  + +GV
Sbjct: 200 HIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD----PVKQVMELTRGRGV 255
Query: 223 DVLYDPVGGKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK 281
           +V  D VG + T + +  LL    +++++G+  GE+   P    +    +  G   G+Y 
Sbjct: 256 NVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELR-FPTIRVISSEVSFEGSLVGNYV 313
Query: 282 IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
                     L EL+  A +G + + +   +   E N     +E  +V+G+ ++
Sbjct: 314 ---------ELHELVTLALQGKVRVEVD-IHKLDEINDVLERLEKGEVLGRAVL 357

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 16/137 (11%)
Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           TV+ HDE   + +    P P L     V VRV+A ++N ++  ++ G++    P  F+ G
Sbjct: 16  TVNDHDE---VTVWNAAPCPMLPRD-QVYVRVEAVAINPSD-TKMRGQFAT--PWAFL-G 67
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVADQSELFPVPKGCDL 124
           +DY+GTV AVG +V++ +VGD V G            G+F+Q+ V        +PKG   
Sbjct: 68  TDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSF 127
Query: 125 LAAAALPVAFGTSHVAL 141
             AAALP    T+ +A+
Sbjct: 128 EQAAALPAGISTAGLAM 144

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 16/137 (11%)
Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           TV+ HDE   + +    P P L     V VRV+A ++N ++   + G++    P  F+ G
Sbjct: 16  TVNDHDE---VTVWNAAPCPMLPRD-QVYVRVEAVAINPSD-TSMRGQFAT--PWAFL-G 67
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVADQSELFPVPKGCDL 124
           +DY+GTV AVG +V++ +VGD V G            G+F+Q+ V        +PKG   
Sbjct: 68  TDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSF 127
Query: 125 LAAAALPVAFGTSHVAL 141
             AAALP    T+ +A+
Sbjct: 128 EQAAALPAGISTAGLAM 144

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 31/319 (9%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 34  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAE 93
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFIV---ADQSE 114
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI      QS+
Sbjct: 94  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 153
Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 173
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 154 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 213
Query: 174 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 226
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +    L 
Sbjct: 214 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGGEAKLAL- 272
Query: 227 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 273 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 332
Query: 287 VLEDSLRELLLWAAKGLIT 305
           +   +L +++ W  +G +T
Sbjct: 333 LKTSTLNQIIAWYEEGKLT 351

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 31/319 (9%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 12  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAE 71
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFIV---ADQSE 114
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI      QS+
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 173
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 174 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 226
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +   +  
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGGE-AKLAL 250
Query: 227 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 287 VLEDSLRELLLWAAKGLIT 305
           +   +L +++ W  +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 31/319 (9%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 34  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTE 93
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFIV---ADQSE 114
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI      QS+
Sbjct: 94  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 153
Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 173
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 154 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 213
Query: 174 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 226
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +    L 
Sbjct: 214 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL- 272
Query: 227 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 273 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 332
Query: 287 VLEDSLRELLLWAAKGLIT 305
           +   +L +++ W  +G +T
Sbjct: 333 LKTSTLNQIIAWYEEGKLT 351

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 31/319 (9%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 12  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTE 71
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFIV---ADQSE 114
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI      QS+
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 173
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 174 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 226
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +   +  
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE-AKLAL 250
Query: 227 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 287 VLEDSLRELLLWAAKGLIT 305
           +   +L +++ W  +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 131/324 (40%), Gaps = 52/324 (16%)
Query: 16  IHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74
           +H   +P+ + + + P+P       V V+++A+ + + +     G +  KPPLPF+PG +
Sbjct: 12  VHAYGAPLRIEEVKVPLP---GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE 68
Query: 75  YSGTVDAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQ 106
             G V AVG  V+  K GD                      T+C      G++  G +A+
Sbjct: 69  GVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAE 128
Query: 107 FIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXX 166
           +++AD + +  +PK  +    A +  A  T +  L  +     GQ               
Sbjct: 129 YVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGL-KQTNARPGQ-WVAISGIGGLGHVA 186
Query: 167 XQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV-DVL 225
            Q  +  G  + A+     K++  + LG    V+   E  + +++     R + G   VL
Sbjct: 187 VQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQ-----RDIGGAHGVL 241
Query: 226 YDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 285
              V      +++ +   G  I ++G   G+ P  P    ++K   + G   G+      
Sbjct: 242 VTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPT-PIFDVVLKGLHIAGSIVGTRA---- 296
Query: 286 HVLEDSLRELLLWAAKGLI--TIH 307
                 L+E L +A +GL+  TIH
Sbjct: 297 -----DLQEALDFAGEGLVKATIH 315

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 143/365 (39%), Gaps = 57/365 (15%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V R  G          +P+ + +  P+PQ      V+V+++A+ + + +     G 
Sbjct: 3   MKAAVVRAFG----------APLTIDEV-PVPQPGPGQ-VQVKIEASGVCHTDLHAADGD 50
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC-- 96
           +  KP LPF+PG +  G V AVG  VS  K GD                      T+C  
Sbjct: 51  WPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK 110
Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX 152
               G++  G + +++VAD + +  +P     +  A +  A  T +  L        GQ 
Sbjct: 111 QQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQ- 168
Query: 153 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
                          Q  +  G  + AV     K+   + LG +  V+  +    P+   
Sbjct: 169 WVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTD--PAA-- 224
Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
           +L+        VL   V  K   +++ ++  G  I + G   G+    P    ++K  T+
Sbjct: 225 WLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGT-PIFDVVLKGITI 283
Query: 273 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
            G   G+            L+E L +AA G +   +S T    + N  F  + + KV G+
Sbjct: 284 RGSIVGT---------RSDLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGR 333
Query: 333 VMIAF 337
           V++ F
Sbjct: 334 VVLDF 338

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 31/319 (9%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G    KP          
Sbjct: 12  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKTTGFGTTE 71
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFIV---ADQSE 114
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI      QS+
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 173
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 174 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 226
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +   +  
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE-AKLAL 250
Query: 227 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 287 VLEDSLRELLLWAAKGLIT 305
           +   +L +++ W  +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 114/303 (37%), Gaps = 43/303 (14%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P P+ N    + + VK + + + +     G +     LP V G + +G V  +G NV  +
Sbjct: 26  PKPKANE---LLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGW 82
Query: 90  KVGD----------------------------TVCGFAALGSFAQFIVADQSELFPVPKG 121
           K+GD                             + G+   GSF Q+  AD  +   +P+G
Sbjct: 83  KIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQG 142
Query: 122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVA 181
            DL   A +  A  T + AL   A L +G                 Q  K  G  ++ + 
Sbjct: 143 TDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGID 201
Query: 182 RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 241
            G  K +  +S+G +  +D + E  I  V   LKA       V+   V     + S + +
Sbjct: 202 GGEGKEELFRSIGGEVFIDFTKEKDI--VGAVLKATDGGAHGVINVSVSEAAIEASTRYV 259
Query: 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 301
                 +++G  +G          +VK+ ++ G Y G+             RE L + A+
Sbjct: 260 RANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---------RADTREALDFFAR 310
Query: 302 GLI 304
           GL+
Sbjct: 311 GLV 313

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 136 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 195
           T++  L+    +  G+                QI K+ G  ++  A   EKI +LK +G 
Sbjct: 132 TAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191
Query: 196 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS- 254
           D      N   + S++E LK     G D  +D VGG+     L  +    +I + G  S 
Sbjct: 192 DAAF---NYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISV 248
Query: 255 ----GEIPVIPANIALV-KNWTVHGLYWGSYKIHRPH--VLEDSLRELLLWAAKGLITIH 307
                ++P  P+  +++ K   + G     + ++R    V E +LR+L+ W  +G I  H
Sbjct: 249 YNRMDQLPPGPSPESIIYKQLRIEG-----FIVYRWQGDVREKALRDLMKWVLEGKIQYH 303
Query: 308 ISHTYSPSEANLAFSAIEDRKVIGKVMI 335
              T        AF  + +   +GK ++
Sbjct: 304 EHVTKGFENMPAAFIEMLNGANLGKAVV 331

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 138/365 (37%), Gaps = 59/365 (16%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A V R  G P            L+  E PIPQ      ++V ++A+ + + +     G
Sbjct: 26  MKAAVVRAFGKP------------LTIDEVPIPQPGPGQ-IQVAIQASGVCHTDLHAAEG 72
Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC- 96
            +  KP  PF+PG +  G V AVG  V + K GD                      T+C 
Sbjct: 73  DWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE 132
Query: 97  -----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 151
                G++  G FA+++VAD + +  +PK  D    A +  A  T +  L  +   +   
Sbjct: 133 EQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGL--KVTDTKPG 190
Query: 152 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211
                           Q  +  G  + AV     K+   + LG    V   N   +    
Sbjct: 191 DWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTV---NAKTVADPA 247
Query: 212 EFLKARKLKGVD-VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNW 270
            +++     G   VL   V  K  +++L ++  G  + + G   G+ P+   N+ L    
Sbjct: 248 AYIRKETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVL-NGV 306
Query: 271 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 330
           TV G   G+            L+E L +AA G +   I  T    + N  F  +    + 
Sbjct: 307 TVRGSIVGTRL---------DLQESLDFAADGKVKATI-QTGKLEDINAIFDDMRQGNIE 356
Query: 331 GKVMI 335
           G++++
Sbjct: 357 GRIVM 361

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 93/234 (39%), Gaps = 27/234 (11%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V VRV  +S+NY + L  +   +     PFVPG D +G V  V      F+ GD V    
Sbjct: 33  VLVRVHYSSVNYKDGLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRFREGDEVIATG 90
Query: 97  ---GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL-----S 148
              G    G ++++       L P+PKG  L  A A+  A  T+ ++ +HR +       
Sbjct: 91  YEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALS-IHRLEEHGLTPE 149
Query: 149 SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV---DLSNES 205
            G                  + K  G T+ A    A +  +L+ LG   V+   D+  E 
Sbjct: 150 RGPVLVTGATGGVGSLAVSXLAK-RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVXAER 208
Query: 206 VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-EIP 258
           + P  K+   A          DPVGG+     L    +G  + V G   G E+P
Sbjct: 209 IRPLDKQRWAA--------AVDPVGGRTLATVLSRXRYGGAVAVSGLTGGAEVP 254

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF---VPG 72
           I D+ S + +   +P P   +   + V VKA S+N  +Y       +  PP      V G
Sbjct: 34  ITDDASLLDIELPKPAP---AGHDILVEVKAVSVNPVDY----KVRRSTPPDGTDWKVIG 86
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSELFPVPKGCDLLAAAA 129
            D +G V AVGP+V+ F+ GD V    ++   G+ A+F + D+  +   PK  D   AAA
Sbjct: 87  YDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAA 146
Query: 130 LPVAFGTSHVALVHRAQLS-----SGQXXXXXXXXXXXXXXXXQIGKV-CGATIIAVARG 183
           LP+   T+  A   R  ++     +                  QI +     T+IA A  
Sbjct: 147 LPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206
Query: 184 AEKIKFLKSLGVDHVVDLS 202
            E  +++KSLG  HV+D S
Sbjct: 207 PETQEWVKSLGAHHVIDHS 225

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 139/345 (40%), Gaps = 48/345 (13%)
Query: 22  PIVLSKTEPIPQLNSSTA------VRVRVKATSLNYA-NYLQILGKYQEKPPLPFVPGSD 74
           PI+    E I ++++++       +R    AT+LN   + L +  K +E    P   G D
Sbjct: 45  PIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE---FPLTLGRD 101
Query: 75  YSGTVDAVGPNVSNFKVGDTVCGFAAL-----GSFAQFIVADQSELFPVPKGCDLLAAAA 129
            SG V   G +V  FK GD V  +AA+     G+ ++F+V   +E+   PK      AA+
Sbjct: 102 VSGVVMECGLDVKYFKPGDEV--WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAAS 159
Query: 130 LPVAFGTSHVALVHRAQLS----SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAE 185
           LP    T+  A+     L+    +G+                Q+ K   A + AV    +
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD 218
Query: 186 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL-NWG 244
             + ++ LG D V+D  +     SV+E LK+  LK  D + D VGG     +   L  W 
Sbjct: 219 ASELVRKLGADDVIDYKS----GSVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWS 272
Query: 245 AQILV------------IGFASG--EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 290
               V            +G A G  +  V   + AL   W      W  +    P +  D
Sbjct: 273 GATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCL--D 330
Query: 291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
            + EL+     G I   I  T+  S+   AF  +E     GK +I
Sbjct: 331 DIAELV---DAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 372

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 115/317 (36%), Gaps = 65/317 (20%)
Query: 22  PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
           P+ + + E  P    +  VR+++ ATSL + +   I  K+ E    P + G + +G V++
Sbjct: 22  PLCIEEVEVAPP--KAHEVRIQIIATSLCHTDATVIDSKF-EGLAFPVIVGHEAAGIVES 78
Query: 82  VGPNVSNFKVGDTV---------------------CG----------------------- 97
           +GP V+N K GD V                     CG                       
Sbjct: 79  IGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFT 138
Query: 98  --------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 149
                   F    +F+Q+ V     L  +    +L     L   F T + A ++ A+++ 
Sbjct: 139 CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTP 198
Query: 150 GQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 209
           G                        + II +   +EK    K+LG      L+   +   
Sbjct: 199 GSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDC--LNPRDLHKP 256
Query: 210 VKEFLKARKLKGVDVLYDPVGGKLTKES---LKLLNWGAQILVIGFASGE--IPVIPANI 264
           ++E +      GVD   D  GG  T ++        WG+    IG A+G   + V P   
Sbjct: 257 IQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTF-IGVAAGSKGLTVFPEE- 314
Query: 265 ALVKNWTVHGLYWGSYK 281
            L+   T++G ++G +K
Sbjct: 315 -LIIGRTINGTFFGGWK 330

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 125/320 (39%), Gaps = 72/320 (22%)
Query: 21  SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80
           SP+ + + E  P    +  VR++V AT + + +      K  +K   P V G + +G V+
Sbjct: 19  SPLCIEEIEVSPP--KACEVRIQVIATCVCHTDINATDPK--KKALFPVVLGHECAGIVE 74
Query: 81  AVGPNVSNFKVGDTV---------------------CG---------------------- 97
           +VGP V+NFK GD V                     CG                      
Sbjct: 75  SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF 134
Query: 98  ---------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
                    F  + SF+Q+ V  ++ L  V    +L     +   F + + A ++ A+++
Sbjct: 135 TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT 194
Query: 149 SGQXXXXXXXXXXXXXXXXQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
            G                    K+ GA+ IIA+    EK    K+LG      L+   + 
Sbjct: 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFPKAKALGATDC--LNPRELD 251
Query: 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLK------LLNWGAQILVIGFASGEIPVIP 261
             V++ +      GVD   D  G   T ++LK      +L WG+   V+G    E+ +  
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAG---TAQTLKAAVDCTVLGWGS-CTVVGAKVDEMTIPT 307
Query: 262 ANIALVKNWTVHGLYWGSYK 281
            ++ L +  +++G ++G +K
Sbjct: 308 VDVILGR--SINGTFFGGWK 325

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 141/385 (36%), Gaps = 78/385 (20%)
Query: 11  DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYAN-------------YLQI 57
           DP  SIH ++ P+        P+L    A+ V V A+S+NY +             +L+ 
Sbjct: 71  DPRKSIHLDEVPV--------PELGPGEAL-VAVMASSVNYNSVWTSIFEPVSTFAFLER 121
Query: 58  LGKYQ---EKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTVC----------------- 96
            GK     ++  LP+ + GSD +G V   GP V+ ++ GD V                  
Sbjct: 122 YGKLSPLTKRHDLPYHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDT 181
Query: 97  ---------GFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR-- 144
                    GF    G  A+  +   ++L P PK      AAA  +   T++  LV R  
Sbjct: 182 MLDPEQRIWGFETNFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNG 241
Query: 145 AQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 204
           A +  G                 Q     GA  I V    +K +  +S+G + ++D + E
Sbjct: 242 AAMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAE 301
Query: 205 SV-------IPSVKEF----LKARKLKG---VDVLYDPVGGKLTKESLKLLNWGAQILVI 250
                        KE+     + R+L G   +D++++  G +    S+ +   G  I   
Sbjct: 302 GYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTC 361
Query: 251 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 310
              SG +         +    + G ++ +Y+            E     AKG I   +S 
Sbjct: 362 ASTSGYMHEYDNRYLWMSLKRIIGSHFANYR---------EAYEANRLIAKGKIHPTLSK 412
Query: 311 TYSPSEANLAFSAIEDRKVIGKVMI 335
           TYS  E   A   +      GKV +
Sbjct: 413 TYSLEETGQAAYDVHRNLHQGKVGV 437

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 113/307 (36%), Gaps = 67/307 (21%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
              ++A++++    +     +  + + AA L  +  T++ A V +A L   +        
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVVGAG 180
Query: 160 XXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 218
                   QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++  
Sbjct: 181 GGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-- 238
Query: 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 278
            KGVD + D             LN+  + L          V P  +A    + + GL+  
Sbjct: 239 -KGVDAVID-------------LNYSEKTL---------SVYPKALAKQGKYVMVGLFGA 275
Query: 279 SYKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 325
               H P +              +     ++  A  G +   I+ T    EAN A   +E
Sbjct: 276 DLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLE 335
Query: 326 DRKVIGK 332
           + K IG+
Sbjct: 336 NFKAIGR 342

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 113/307 (36%), Gaps = 67/307 (21%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
              ++A++++    +     +  + + AA L  +  T++ A V +A L   +        
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVVGAG 180
Query: 160 XXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 218
                   QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++  
Sbjct: 181 GGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-- 238
Query: 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 278
            KGVD + D             LN+  + L          V P  +A    + + GL+  
Sbjct: 239 -KGVDAVID-------------LNYSEKTL---------SVYPKALAKQGKYVMVGLFGA 275
Query: 279 SYKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 325
               H P +              +     ++  A  G +   I+ T    EAN A   +E
Sbjct: 276 DLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLE 335
Query: 326 DRKVIGK 332
           + K IG+
Sbjct: 336 NFKAIGR 342

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 72/320 (22%)
Query: 21  SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80
           SP+ + + E  P    +  VR++V AT +   +      K  +K   P V G + +G V+
Sbjct: 19  SPLCIEEIEVSPP--KACEVRIQVIATCVCPTDINATDPK--KKALFPVVLGHECAGIVE 74
Query: 81  AVGPNVSNFKVGDTV---------------------CG---------------------- 97
           +VGP V+NFK GD V                     CG                      
Sbjct: 75  SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF 134
Query: 98  ---------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
                    F  + SF+Q+ V  ++ L  V    +L     +   F + + A ++ A+++
Sbjct: 135 TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT 194
Query: 149 SGQXXXXXXXXXXXXXXXXQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
            G                    K+ GA+ IIA+    EK    K+LG      L+   + 
Sbjct: 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFPKAKALGATDC--LNPRELD 251
Query: 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLK------LLNWGAQILVIGFASGEIPVIP 261
             V++ +      GVD   D  G   T ++LK      +L WG+   V+G    E+ +  
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAG---TAQTLKAAVDCTVLGWGS-CTVVGAKVDEMTIPT 307
Query: 262 ANIALVKNWTVHGLYWGSYK 281
            ++ L +  +++G ++G +K
Sbjct: 308 VDVILGR--SINGTFFGGWK 325

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 112/307 (36%), Gaps = 67/307 (21%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
              ++A++++    +     +  + + AA L  +  T++ A V +A L   +        
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVVGAG 180
Query: 160 XXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 218
                   QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++  
Sbjct: 181 GGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-- 238
Query: 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 278
            KGVD + D             LN   + L          V P  +A    + + GL+  
Sbjct: 239 -KGVDAVID-------------LNNSEKTL---------SVYPKALAKQGKYVMVGLFGA 275
Query: 279 SYKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 325
               H P +              +     ++  A  G +   I+ T    EAN A   +E
Sbjct: 276 DLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLE 335
Query: 326 DRKVIGK 332
           + K IG+
Sbjct: 336 NFKAIGR 342

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 103/270 (38%), Gaps = 31/270 (11%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +AL   K  D  VS+H     +    TE +P+      V ++V  + +NY + L     
Sbjct: 5   FQALQAEKNAD-DVSVH-----VKTISTEDLPK----DGVLIKVAYSGINYKDGLAGKAG 54
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------GFAALGSFAQFIVADQSE 114
                  P + G D +GTV  V  N   F  GD V       G +  G  +++       
Sbjct: 55  GNIVREYPLILGIDAAGTV--VSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW 112
Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----GQXXXXXXXXXXXXXXXXQI 169
           L P+P+   L  A     A  T+ ++ VHR + +      G                  +
Sbjct: 113 LVPLPQNLSLKEAXVYGTAGFTAALS-VHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXL 171
Query: 170 GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229
            K  G  ++A     E   +LK LG   V+  S E V     + L  ++ +G     DPV
Sbjct: 172 NK-RGYDVVASTGNREAADYLKQLGASEVI--SREDVYDGTLKALSKQQWQGA---VDPV 225
Query: 230 GGKLTKESLKLLNWGAQILVIGF-ASGEIP 258
           GGK     L  + +G  + V G    GE+P
Sbjct: 226 GGKQLASLLSKIQYGGSVAVSGLTGGGEVP 255

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 90/240 (37%), Gaps = 55/240 (22%)
Query: 11  DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYAN-------------YLQI 57
           DP  SIH +  P+        P+L    A+ V V A+S+NY +             +L+ 
Sbjct: 53  DPRKSIHLDDVPV--------PELGPGEAL-VAVMASSVNYNSVHTSIFEPLSTFGFLER 103
Query: 58  LGKYQE---KPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTVC----------------- 96
            G+  +   +  LP+ V GSD +G V   GP V+ ++ GD V                  
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDT 163
Query: 97  ---------GFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR-- 144
                    GF    G  A+  +   ++L P P       AAA  +   T++  LV R  
Sbjct: 164 MLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNG 223
Query: 145 AQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 204
           A +  G                 Q     GA  I V    +K +  +++G + ++D + E
Sbjct: 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 132/366 (36%), Gaps = 70/366 (19%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQIL----------------GKYQEKPPLPF-VPG 72
           P+P+L +   V V V A+S+NY      +                G +  +   P+ V G
Sbjct: 56  PMPEL-APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLG 114
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVC--------------------------GFAA-LGSFA 105
           SD SG V   G  V  +K GD V                           GF    G  A
Sbjct: 115 SDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLA 174
Query: 106 QFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLSSGQXXXXXXXXXXXX 163
           ++ V   S+L P P       AA  P+  GT++  LV    AQ+  G             
Sbjct: 175 EYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLG 234
Query: 164 XXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK-----ARK 218
               Q  K  G   +AV   A+K   +++LG D V++ +   +   + +  +      RK
Sbjct: 235 SYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294
Query: 219 LKGV---------DVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKN 269
           L  +         D++++  G      S+ +   G  ++  G +SG +         +K 
Sbjct: 295 LAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKL 354
Query: 270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV 329
             + G +  +   H      + L E       G +   +S  Y  +EA  A   ++  + 
Sbjct: 355 KKIVGSHGAN---HEEQQATNRLFE------SGAVVPAMSAVYPLAEAAEACRVVQTSRQ 405
Query: 330 IGKVMI 335
           +GKV +
Sbjct: 406 VGKVAV 411

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/351 (19%), Positives = 131/351 (37%), Gaps = 75/351 (21%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGSDYSGTVDAV 82
           PIP+   S  V ++++A  + +++     G++            LP   G + +G ++ V
Sbjct: 19  PIPKPKGSQ-VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEV 77
Query: 83  GPNVSNFKVGDTV----------CGFAALG-----------------SFAQFIVADQSEL 115
           G  V  +  GD V          C +  +G                 ++A++++    + 
Sbjct: 78  GDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKY 137
Query: 116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK-VCG 174
               +    + AA L  +  T++ A V +A L   +                QI K V G
Sbjct: 138 LYKLRRLSAVEAAPLTCSGVTTYRA-VRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSG 196
Query: 175 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
           ATII V    E ++  K  G D+V++ S++  +  ++   +    KG D + D       
Sbjct: 197 ATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQG---KGADAVID------- 246
Query: 235 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR- 293
                 LN   + L I          P  +A    + + GL+    K H P +  + ++ 
Sbjct: 247 ------LNNSEKTLSI---------YPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQF 291
Query: 294 ------------ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
                        ++  A  G +   ++ T    EAN A   +E+ K +G+
Sbjct: 292 IGSLVGNQSDFLGIMSLAEAGKVKPMVTKTMKLEEANEAIDNLENFKAVGR 342

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 113/310 (36%), Gaps = 67/310 (21%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 159
              ++A++++    +     +  + + AA L  +  T++ A V +A L   +        
Sbjct: 122 FDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVVGAG 180
Query: 160 XXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 218
                   QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++  
Sbjct: 181 GGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-- 238
Query: 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 278
            KGVD + D             LN   + L          V P  +A    +   GL+  
Sbjct: 239 -KGVDAVID-------------LNNSEKTL---------SVYPKALAKQGKYVXVGLFGA 275
Query: 279 SYKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 325
               H P +              +     +   A  G +   I+ T    EAN A   +E
Sbjct: 276 DLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKPXITKTXKLEEANEAIDNLE 335
Query: 326 DRKVIGKVMI 335
           + K IG+ ++
Sbjct: 336 NFKAIGRQVL 345

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 90/230 (39%), Gaps = 28/230 (12%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V V V  +SLNY + L I GK +     P +PG D++GTV         F  G  V    
Sbjct: 51  VTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRT--SEDPRFHAGQEVLLTG 108
Query: 96  --CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH------RAQL 147
              G    G  A+        L  +P+G D   A  +  A  T+ + ++       R Q 
Sbjct: 109 WGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQ- 167
Query: 148 SSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
             G+                 + K+ G  ++AV+      ++LKSLG           V+
Sbjct: 168 -DGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGASR--------VL 217
Query: 208 PSVKEFLKARKLKGV--DVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
           P   EF ++R L+        D VG K+  + L  +N+G  +   G A G
Sbjct: 218 PR-DEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGG 266

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 136 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 195
           T++  L+    +  G+                QI K+ G  ++      EK+ +L+ LG 
Sbjct: 148 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGF 207
Query: 196 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 251
           D V    N   + S++E LK     G D  +D VGG+ +   +  +    +I + G
Sbjct: 208 DVVF---NYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	347
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-127
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-121
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-108
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-100
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-99
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-98
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-96
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	6e-96
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	2e-90
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	6e-89
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-87
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-86
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	6e-82
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-79
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	9e-76
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-73
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-72
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-69
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-68
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-65
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	3e-65
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-64
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	3e-60
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-59
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-58
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-54
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-53
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-50
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-47
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-42
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-42
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	5e-42
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-40
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	5e-38
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-36
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-33
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	7e-33
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	9e-33
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-32
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	7e-32
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-31
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-31
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	4e-31
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	5e-30
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-29
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-27
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	4e-27
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	5e-27
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	1e-23
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	1e-23
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	4e-23
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	2e-22
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-22
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	2e-21
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	3e-21
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	5e-21
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-20
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-19
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-18
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-18
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-17
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-14
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	4e-14
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	9e-14
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-13
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-11
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	8e-11
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-05
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	4e-05
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-04
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	8e-04

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  366 bits (941), Expect = e-127
 Identities = 111/336 (33%), Positives = 166/336 (49%), Gaps = 18/336 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+  + L  P            L  T+   P       V V VKA  + + +YL   G
Sbjct: 22  MKAIQAQSLSGPEG----------LVYTDVETPGA-GPNVVVVDVKAAGVCFPDYLMTKG 70

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           +YQ K   PFVPG + +G V +     S  K GD V  F  +G +A+ +    S + P P
Sbjct: 71  EYQLKMEPPFVPGIETAGVVRSAPE-GSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTP 129

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
              D   A AL   + T + A   R QL +G+ +LVLGAAGG+G AA+QI K  GA +IA
Sbjct: 130 PQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIA 189

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           V       +F+KS+G D V+ L  E    +V+E        GVD++ DP+GG    ++++
Sbjct: 190 VVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGA---GVDMVVDPIGGPAFDDAVR 245

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
            L    ++LV+GFA+G IP I  N  L++N ++ G+ WG +       L ++   L    
Sbjct: 246 TLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLV 305

Query: 300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           A+G +   +S     SE   A     D KV GK+++
Sbjct: 306 AEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVL 340

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  351 bits (903), Expect = e-121
 Identities = 87/343 (25%), Positives = 139/343 (40%), Gaps = 22/343 (6%)

Query: 1   MEALVCRKLGDPT--VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL 58
           + ALV    GDP   V + + +                 + VRV++ A  +N ++   I 
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELA------AVRG-----SDVRVKMLAAPINPSDINMIQ 75

Query: 59  GKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-FAALGSFAQFIVADQSELFP 117
           G Y   P LP V G++    V AVG NV+  K GD V    A LG++    V  +  L  
Sbjct: 76  GNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQ 135

Query: 118 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 177
           VP    L +AA L V   T++  L+   QL  G  ++   +  GVG A +QI    G   
Sbjct: 136 VPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRT 195

Query: 178 IAVARGAEKI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 233
           I V R    I      LKSLG +HV+             F   + +    +  + VGGK 
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF---KDMPQPRLALNCVGGKS 252

Query: 234 TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY-KIHRPHVLEDSL 292
           + E L+ L  G  ++  G  + +  V   ++ + K+  + G +   + K H P   ++ +
Sbjct: 253 STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI 312

Query: 293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             L     +G +T          +   A  A     +  K ++
Sbjct: 313 LTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQIL 355

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  320 bits (821), Expect = e-108
 Identities = 79/369 (21%), Positives = 142/369 (38%), Gaps = 40/369 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A++  + G+P   +  +   I          L +   V V+   + +N ++  QI G 
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEI------DDDNL-APNEVIVKTLGSPVNPSDINQIQGV 56

Query: 61  YQEKPPL---------PFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-FAALGSFAQFIVA 110
           Y  KP               G++    V  VG NVS+ + GD V       G++    + 
Sbjct: 57  YPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 111 DQSELFPV-----------PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL-GA 158
           +  +   +           P G  +   A + V   T+++ L H  +L+ G+   +  G 
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGG 176

Query: 159 AGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNES---VIPSVK 211
              VG  A QIGK+     I+V R      E +  LK LG   V+     +     P++K
Sbjct: 177 TSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIK 236

Query: 212 EFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 271
           E++K        +  + VGGK +    + LN    +L  G  S +   IP ++ + KN+T
Sbjct: 237 EWIKQSG-GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFT 295

Query: 272 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED---RK 328
             G +      +   +   +L +++ W  +G +T   S               +D     
Sbjct: 296 SAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANS 355

Query: 329 VIGKVMIAF 337
             GK +I +
Sbjct: 356 KDGKQLITY 364

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  296 bits (760), Expect = e-100
 Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 35/335 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V ++LG P           ++   EP  +      V +RV+A  LN+A++L  LG 
Sbjct: 1   MKAWVLKRLGGPLE---------LVDLPEPEAEEGE---VVLRVEAVGLNFADHLMRLGA 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
           Y  +   PF+PG +  G V            G         G  A+ +   +  L P+P+
Sbjct: 49  YLTRLHPPFIPGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPE 97

Query: 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 180
           G     AAA PV+F T+++AL  RAQ   G+ +LV  AAG +G AAVQ+ +  G  ++A 
Sbjct: 98  GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156

Query: 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240
           A   EK+    +LG +     +        +    A+   G+D++ +  G ++ + SL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAEV-----PER---AKAWGGLDLVLEVRGKEVEE-SLGL 207

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L  G +++ IG A GE+  IP    + +N  V G +W +  +    ++E++L  LL    
Sbjct: 208 LAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 266

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
              +   +   +  +EA  AF A+ DR   GKV++
Sbjct: 267 -RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVV 300

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  296 bits (761), Expect = 2e-99
 Identities = 70/343 (20%), Positives = 128/343 (37%), Gaps = 14/343 (4%)

Query: 1   MEALVCRKLGDP--TVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQI 57
           M+AL+    G          E     L +    +P    S  V ++V   S+N ++   I
Sbjct: 11  MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPS-QVLIKVNLASINPSDVAFI 69

Query: 58  LGKYQEKPPLPFVPGSDYSGTVDAVGPNV-SNFKVGDTVCGFAAL---GSFAQFIVADQS 113
            G+Y +        G +  GT+ A G    +   VG  V     L   GS+A++ VA+ +
Sbjct: 70  KGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAA 129

Query: 114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC 173
              P+         AA+ V   T+  A+    +    +  ++   A  +    + + K  
Sbjct: 130 ACIPLLDTVRDEDGAAMIVNPLTAI-AMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEE 188

Query: 174 GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 233
           G   I   R  E+I  LK +G  HV++        +++E +KA       +  D V G L
Sbjct: 189 GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAE---QPRIFLDAVTGPL 245

Query: 234 TKESLKLLNWGAQILVIGFASGEIPVI-PANIALVKNWTVHGLYWGSYKIHRPHVLEDSL 292
                  +   A+ ++ G    +  VI      + ++  + G +   +          ++
Sbjct: 246 ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAI 305

Query: 293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
            E     + G  +  ++     +EA  A+   E  K  GKV I
Sbjct: 306 LEAQKRFSDGRWSTDVTAVVPLAEAI-AWVPAELTKPNGKVFI 347

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  294 bits (754), Expect = 2e-98
 Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 20/340 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            + +   K G+P           VL      I  L  +  V VR+    +N ++ + I G
Sbjct: 5   GKLIQFHKFGNPKD---------VLQVEYKNIEPLKDN-EVFVRMLVRPINPSDLIPITG 54

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
            Y  + PLP +PG +  G V+ VG  VS   +G  V      G++ +++      + P+P
Sbjct: 55  AYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIP 114

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
              D   AA + +   T+ V       L    VLLV      +G    Q+ ++    +IA
Sbjct: 115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIA 174

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
           V R  +  + L  LG  +V+D S   +  +V E        G D   D +GG    E   
Sbjct: 175 VTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNG---IGADAAIDSIGGPDGNELAF 231

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY--KIHRPHVLEDSLRELLL 297
            L      L IG  SG    +     + K      ++   +      P+  +++ R L+ 
Sbjct: 232 SLRPNGHFLTIGLLSG--IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIR 289

Query: 298 WAAKGLIT-IHISHTYSPSEANLAFSAIED-RKVIGKVMI 335
                 +  + +  TY  ++   A   ++   K  GKV +
Sbjct: 290 LVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFL 329

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  289 bits (741), Expect = 2e-96
 Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 19/337 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   + G P V        + L     +P       V ++V A  +N        G 
Sbjct: 30  MRAVRVFEFGGPEV--------LKLRSDIAVPIP-KDHQVLIKVHACGVNPVETYIRSGT 80

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAALGSFAQFIVADQSELFPVP 119
           Y  KP LP+ PGSD +G ++AVG N S FK GD V       G +A++ +A    ++ +P
Sbjct: 81  YSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLP 140

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
           +  D    AA+ + + T++ AL+H A + +G+ +LV GA+GGVG+AA QI +  G  I+ 
Sbjct: 141 EKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILG 200

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
            A   E  K +   G   V +    + I  +K+++     KG+D++ + +      + L 
Sbjct: 201 TAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGE---KGIDIIIEMLANVNLSKDLS 257

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
           LL+ G +++V+G   G I + P +  + K  ++ G+   S         +     L    
Sbjct: 258 LLSHGGRVIVVGS-RGTIEINPRDT-MAKESSIIGVTLFSST---KEEFQQYAAALQAGM 312

Query: 300 AKGLITIHISHTYSPSEANLAFSA-IEDRKVIGKVMI 335
             G +   I   Y   +   A    I      GK+++
Sbjct: 313 EIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 349

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  287 bits (738), Expect = 6e-96
 Identities = 81/359 (22%), Positives = 143/359 (39%), Gaps = 36/359 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A+V    G              L      +P+      +++RVKA  LN+ + +   G
Sbjct: 4   MRAVVLAGFGGLNK----------LRLFRKAMPEP-QDGELKIRVKACGLNFIDLMVRQG 52

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
                P  P VPG + SG V+A+G +V  +++GD V  F    ++A+ +      ++ +P
Sbjct: 53  NIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIP 112

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
                  AAA P+ F T++V L   A L  G  +LV  A GGVG A  Q+        + 
Sbjct: 113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF 172

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
                 K + +K     H+ D  N   +  VK        +GVD++ D + G  T + L 
Sbjct: 173 GTASTFKHEAIKDSV-THLFD-RNADYVQEVKRISA----EGVDIVLDCLCGDNTGKGLS 226

Query: 240 LLNWGAQILVIGFASG----------------EIPVIPANIALVKNWTVHGLYWGS--YK 281
           LL      ++ G ++                 ++  +       +N  + G    +  +K
Sbjct: 227 LLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFK 286

Query: 282 IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM 340
             R  ++   + +L+    +  I   +   ++  E   A   I DR  IGK+++  +  
Sbjct: 287 QGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  273 bits (700), Expect = 2e-90
 Identities = 101/363 (27%), Positives = 158/363 (43%), Gaps = 51/363 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A+V R  G P V          L   + P+P+      VRVR+KA +LN+ +     G
Sbjct: 1   MRAVVMRARGGPEV----------LEVADLPVPEP-GPKEVRVRLKAAALNHLDVWVRKG 49

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL------------------ 101
               K PLP V G+D SG VDAVGP V  F  GD V     L                  
Sbjct: 50  VASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109

Query: 102 ---------GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
                    G++A+++V  ++ L P PK      AAA+P+ F T+   +V +  +  G  
Sbjct: 110 YQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDD 169

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           +LV+ A  GV VAA+QI K+ GA +IA A   +K++  K+LG D  V+ ++      V+ 
Sbjct: 170 VLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRR 229

Query: 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 272
               +   G D + D  G    +  +K    G +I + G +SG    +P      +  ++
Sbjct: 230 LTGGK---GADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI 286

Query: 273 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332
            G    S         +  L  +L +  +G +   +        A      +E+R+V GK
Sbjct: 287 LGSTMAS---------KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGK 337

Query: 333 VMI 335
           V++
Sbjct: 338 VVL 340

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  270 bits (693), Expect = 6e-89
 Identities = 98/362 (27%), Positives = 147/362 (40%), Gaps = 51/362 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+      +            P  L   E P+P+      + VR  A SLNY + L +  
Sbjct: 28  MQEWSTETVA-----------PHDLKLAERPVPEA-GEHDIIVRTLAVSLNYRDKLVLET 75

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC----------------------- 96
                   PFVP SD SG V+AVG +V+ F+ GD V                        
Sbjct: 76  GMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYET 135

Query: 97  -GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155
            G A  G  ++++V  +      PK  D   A+ LP A  T+  ALV +  L +G  ++V
Sbjct: 136 LGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVV 195

Query: 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 215
            G  GGV +  +QI K  GA +I  +   EK+    +LG DH ++   E  +  V     
Sbjct: 196 QG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTG 254

Query: 216 ARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL 275
            R   G D + +  GG    +SLK +    +I VIG   G     P    L+K+  V G+
Sbjct: 255 DR---GADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI 311

Query: 276 YWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             G            +L +L+    +  +   I   Y  +E   A + ++ R   GKV+I
Sbjct: 312 SVGH---------RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLD-RGPFGKVVI 361

Query: 336 AF 337
            F
Sbjct: 362 EF 363

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  266 bits (682), Expect = 2e-87
 Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 8/325 (2%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           V +     P V+   + P+P       V VR +A  +N  +  Q  G Y        + G
Sbjct: 32  VDLKSFGGPDVMVIGKRPLPVA-GEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILG 90

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
            + SG +  VGP VS + VGD VCG A  G++A++ +    ++ P PKG D + AAALP 
Sbjct: 91  LELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPE 150

Query: 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 192
            F T    L   A L+ G+ +L+ G   G+G  A+Q+ +  GA + A A    K +  + 
Sbjct: 151 TFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 252
           LG    ++  +E     +K        +GVD++ D +G    + ++  L     + +I F
Sbjct: 211 LGAKRGINYRSEDFAAVIKAE----TGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAF 266

Query: 253 ASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL-WAAKGLITIHISH 310
             G +   +  +  +VK  TV G             + D L   +      G +   I  
Sbjct: 267 LGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 311 TYSPSEANLAFSAIEDRKVIGKVMI 335
            ++  +   A   +E+   +GKVM+
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVML 351

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  264 bits (677), Expect = 1e-86
 Identities = 92/353 (26%), Positives = 145/353 (41%), Gaps = 36/353 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+ LV  +L        + +  + LS+  P+P       + VR +   +N ++     G+
Sbjct: 24  MQKLVVTRLS------PNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGR 76

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
           Y      PF  G +  G V A+G + S  + VG  V   A  GSFA++ V   S   PVP
Sbjct: 77  YDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP-GSFAEYTVVPASIATPVP 135

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
                     L V+  T++++L     LS G+ +LV  AAGG G  A+Q+ K     +I 
Sbjct: 136 SVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 193

Query: 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239
                EK  FLKSLG D  ++   E     V   LK    +GVDV+Y+ VGG +   ++ 
Sbjct: 194 TCSSDEKSAFLKSLGCDRPINYKTE----PVGTVLKQEYPEGVDVVYESVGGAMFDLAVD 249

Query: 240 LLNWGAQILVIGFASGEIPVIPANIA---------LVKNWTVHGLYWGSYKIHRPHVLED 290
            L    +++VIGF SG       +           L K+ +V G +   Y          
Sbjct: 250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ----A 305

Query: 291 SLRELLLWAAKGLITIHI--------SHTYSPSEANLAFSAIEDRKVIGKVMI 335
           ++  LL     G +   +                   A + +   K  GK+++
Sbjct: 306 AMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  252 bits (645), Expect = 6e-82
 Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 11/332 (3%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           V       P  L   E   P       V ++V A++LN A+ +Q  G+Y   P    + G
Sbjct: 26  VHFDKPGGPENLYVKEVAKPSP-GEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILG 84

Query: 73  SDYSGTVDAVGPNV-SNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131
            + SG V  +GP    ++K+GDT       G  AQ++   +  L P+P+G  L  AAA+P
Sbjct: 85  LEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIP 144

Query: 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191
            A+ T+   L     + +G  +L+     GVG AA+Q+ ++ GA  +  A   +K++  +
Sbjct: 145 EAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE 204

Query: 192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 251
            LG     +   E    +  +F K     GV+++ D +GG   ++++  L    + ++ G
Sbjct: 205 KLGAAAGFNYKKEDFSEATLKFTKGA---GVNLILDCIGGSYWEKNVNCLALDGRWVLYG 261

Query: 252 FASG-EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRE----LLLWAAKGLITI 306
              G +I     +  L K  ++      S       +L ++  E             +  
Sbjct: 262 LMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP 321

Query: 307 HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338
            +   Y  +E   A   +E  K IGK+++   
Sbjct: 322 VLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  248 bits (636), Expect = 2e-79
 Identities = 83/395 (21%), Positives = 141/395 (35%), Gaps = 78/395 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A +  +  DP  SIH +  P+      P           V V A+S+NY +    + +
Sbjct: 43  MFAGLETRDKDPRKSIHLDDVPV------PELG---PGEALVAVMASSVNYNSVHTSIFE 93

Query: 61  Y----------------QEKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-- 101
                             ++  LP+ V GSD +G V   GP V+ ++ GD V        
Sbjct: 94  PLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVE 153

Query: 102 -------------------------GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT 136
                                    G  A+  +   ++L P P       AAA  +   T
Sbjct: 154 LESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNST 213

Query: 137 SHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG 194
           ++  LV R  A +  G  +L+ GA+GG+G  A Q     GA  I V    +K +  +++G
Sbjct: 214 AYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMG 273

Query: 195 VDHVVDLSNESVIPSVKEFL-----------KARKL---KGVDVLYDPVGGKLTKESLKL 240
            + ++D + E       E             + R+L   + +D++++  G +    S+ +
Sbjct: 274 AEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFV 333

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
              G  I      SG +         +    + G ++ +Y             E     A
Sbjct: 334 TRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY---------REAWEANRLIA 384

Query: 301 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           KG I   +S  YS  +   A   +      GKV +
Sbjct: 385 KGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGV 419

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  239 bits (611), Expect = 9e-76
 Identities = 83/397 (20%), Positives = 142/397 (35%), Gaps = 72/397 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPI-VLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQIL 58
             AL  R           +K     L   E P+P+L     V V V A+S+NY      +
Sbjct: 25  YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAP-DEVLVAVMASSINYNTVWSAM 83

Query: 59  GKYQEK-----------------PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL 101
            +                          V GSD SG V   G  V  +K GD V    A 
Sbjct: 84  FEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH 143

Query: 102 ---------------------------GSFAQFIVADQSELFPVPKGCDLLAAAALPVAF 134
                                      G  A++ V   S+L P P       AA  P+  
Sbjct: 144 VDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 135 GTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 192
           GT++  LV    AQ+  G ++L+ GA+GG+G  A+Q  K  G   +AV   A+K   +++
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKL--------------KGVDVLYDPVGGKLTKESL 238
           LG D V++ +   +   + +  +                  +  D++++  G      S+
Sbjct: 264 LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSV 323

Query: 239 KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLW 298
            +   G  ++  G +SG +         +K   + G +  ++         +  +     
Sbjct: 324 IVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANH---------EEQQATNRL 374

Query: 299 AAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
              G +   +S  Y  +EA  A   ++  + +GKV +
Sbjct: 375 FESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAV 411

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  229 bits (587), Expect = 2e-73
 Identities = 97/340 (28%), Positives = 151/340 (44%), Gaps = 23/340 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            + ++  ++G   V          +   + P+P + S   + ++ K T +NY       G
Sbjct: 9   QKVILIDEIGGYDV----------IKYEDYPVPSI-SEEELLIKNKYTGVNYIESYFRKG 57

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFI-VADQSELFPV 118
            Y      P+V G + SGTV A G  V+NF+VGD V  + +  +FAQ+  ++ Q  +  +
Sbjct: 58  IY--PCEKPYVLGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSKISSQGPVMKL 114

Query: 119 PKGCD---LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
           PKG     L   AA  +   T+         +  G  +L+  AAGGVG+   Q+ K+ GA
Sbjct: 115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA 174

Query: 176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235
             IAVA   EK+K  K  G +++++ S E ++  V +F      KGVD  +D VG    +
Sbjct: 175 HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNG---KGVDASFDSVGKDTFE 231

Query: 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 295
            SL  L      +  G ASG IP         KN T+       Y I  P   +    E 
Sbjct: 232 ISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGY-IADPEEWKYYSDEF 290

Query: 296 LLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
                   + I I  TY   +   A + IE RK +GK+++
Sbjct: 291 FGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVL 330

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  225 bits (577), Expect = 4e-72
 Identities = 86/344 (25%), Positives = 145/344 (42%), Gaps = 41/344 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+   + G P V          L   + P P+      + ++V A SLN  +Y    G
Sbjct: 7   MKAIQFDQFGPPKV----------LKLVDTPTPEYRK-NQMLIKVHAASLNPIDYKTRNG 55

Query: 60  KYQEKP----PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL----GSFAQFIVAD 111
                      LP   G D+SG V  +G +V+N  +GD V G A        +A+++ A 
Sbjct: 56  SGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCAS 115

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
              +    +    L AA+LP A  T+  AL ++A++  G V+L+   AGGVG  A+Q+ K
Sbjct: 116 PDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAK 174

Query: 172 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
             G T+I  A       FLK+LG +  ++   E  + ++           VD + D VGG
Sbjct: 175 QKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAIST--------PVDAVIDLVGG 225

Query: 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
            +  +S+  L     I+ +   +    +  A     +             + + ++  + 
Sbjct: 226 DVGIQSIDCLKETGCIVSVPTITAGRVIEVAKQKHRR---------AFGLLKQFNI--EE 274

Query: 292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
           L  L    ++  + I IS  +  SEA  A   +E   V GK++ 
Sbjct: 275 LHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  217 bits (556), Expect = 6e-69
 Identities = 95/338 (28%), Positives = 139/338 (41%), Gaps = 19/338 (5%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            + +    +G P V          L   +          AV VR KA  LN+ +     G
Sbjct: 2   AKRIQFSTVGGPEV----------LEYVDFEPEAP-GPQAVVVRNKAIGLNFIDTYYRSG 50

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELFPV 118
            Y   P LP   G++ +G V+AVG  V+ FKVGD V  G   LG++++  V  ++ L  +
Sbjct: 51  LYP-APFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKL 109

Query: 119 PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII 178
                   AAAL +   T    L    Q+  G+++L   AAGGVG  A Q  K  GA +I
Sbjct: 110 ADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLI 169

Query: 179 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL 238
                 EK    K+LG    +D S+E V   V E       K   V+YD VG      SL
Sbjct: 170 GTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDG---KKCPVVYDGVGQDTWLTSL 226

Query: 239 KLLNWGAQILVIGFASGEIPVIPANIALVKN-WTVHGLYWGSYKIHRPHVLEDSLRELLL 297
             +     ++  G ASG +  +   I   K+   V     GSY  +    L+    EL  
Sbjct: 227 DSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSY-ANNAQNLQTMADELFD 285

Query: 298 WAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             A G + +     Y+  +A  A   +  R+  G  ++
Sbjct: 286 MLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTIL 323

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  216 bits (553), Expect = 3e-68
 Identities = 86/335 (25%), Positives = 138/335 (41%), Gaps = 25/335 (7%)

Query: 14  VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPG 72
             + +   P VL +    PQ  +   V V+++A+  N  +     G+    + PLP + G
Sbjct: 11  AVVEEANGPFVL-RKLARPQP-APGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAA-----LGSFAQFIVADQSELFPVPKGCDLLAA 127
            D +GTV AVGP V +F+VGD V G         G+ AQF   D   L   P    +  A
Sbjct: 69  MDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQA 128

Query: 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI 187
           + LP+ F T+   LV RAQ+  GQ +L+ G  GGVG  A+QI    GA + A A     +
Sbjct: 129 SVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDL 187

Query: 188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQI 247
           ++++ LG   +                +    +G D++YD +GG +   S   +     +
Sbjct: 188 EYVRDLGATPIDASREP-----EDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHV 242

Query: 248 LVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS--LRELLLWAAKGLIT 305
           +                   K  T  G++     +    +      LRE       G + 
Sbjct: 243 VSCLGWGTH----KLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA 298

Query: 306 IHI-SHTYSPSEANLAFSAIEDR----KVIGKVMI 335
             +   T+S +E   A+ A+  R    +  GK+ I
Sbjct: 299 PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  209 bits (533), Expect = 2e-65
 Identities = 89/350 (25%), Positives = 140/350 (40%), Gaps = 37/350 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           + A V  K G P                E  +        VR+R  A  +N+ +     G
Sbjct: 2   VMAAVIHKKGGPDN----------FVWEEVKVGSP-GPGQVRLRNTAIGVNFLDTYHRAG 50

Query: 60  KYQEKPP--LPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELF 116
                     P V G + +  V+ VGP V++F VG+ VC     LG+++Q  +    +L 
Sbjct: 51  IPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLI 110

Query: 117 PVPKGCDLLAA--AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
            VPK  DL     A L +   T+   L    ++  G  +L+  AAGG+G   V   +  G
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG 170

Query: 175 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
           AT+I      EK +  + LG  H ++ S +     V+E       KGVDV+YD +G    
Sbjct: 171 ATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGG---KGVDVVYDSIGKDTL 227

Query: 235 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV------- 287
           ++SL  L         G ASG    I     L           GS  I RP +       
Sbjct: 228 QKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVR--------GSLFITRPALWHYMSNR 279

Query: 288 --LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             +++  + L      G++   ++ T+   EA  A   +  R+ IG +++
Sbjct: 280 SEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVL 329

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  209 bits (535), Expect = 3e-65
 Identities = 85/367 (23%), Positives = 136/367 (37%), Gaps = 48/367 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN---------- 50
             A V  K G   V        +  ++   +P ++    V V+V A S+N          
Sbjct: 22  SMAWVIDKYGKNEV--------LRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGY 73

Query: 51  ----YANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---ALGS 103
                      L    +    P   G D SG V   G +V  FK GD V         G+
Sbjct: 74  GATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGT 133

Query: 104 FAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL----SSGQVLLVLGAA 159
            ++F+V   +E+   PK      AA+LP    T+  A+     L     +G+ +L+LGA+
Sbjct: 134 LSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGAS 193

Query: 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
           GGVG  A+Q+ K   A + AV    +  + ++ LG D V+D  + SV   +K       L
Sbjct: 194 GGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS------L 246

Query: 220 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 279
           K  D + D VGG     +   L   +    +   +  +  +   + +       G+  GS
Sbjct: 247 KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNM-DRLGIADGMLQTGVTVGS 305

Query: 280 YKIHRPHVLE-----------DSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 328
             +                    L ++      G I   I  T+  S+   AF  +E   
Sbjct: 306 KALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGH 365

Query: 329 VIGKVMI 335
             GK +I
Sbjct: 366 ARGKTVI 372

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  205 bits (524), Expect = 4e-64
 Identities = 85/348 (24%), Positives = 135/348 (38%), Gaps = 37/348 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
              +   K G P V          L   E       +   ++V  KA  +N+ +     G
Sbjct: 2   ATRIEFHKHGGPEV----------LQAVEFTPADP-AENEIQVENKAIGINFIDTYIRSG 50

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQSELFPV 118
            Y   P LP   G++ +G V  VG  V + K GD V    +ALG+++        +   +
Sbjct: 51  LYPP-PSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAIL 109

Query: 119 PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII 178
           P       AAA  +   T +  L    ++   +  L   AAGGVG+ A Q  K  GA +I
Sbjct: 110 PAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLI 169

Query: 179 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL 238
                A+K +     G   V++   E ++  +KE       K V V+YD VG    + SL
Sbjct: 170 GTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGG---KKVRVVYDSVGRDTWERSL 226

Query: 239 KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LE 289
             L     ++  G +SG +  +   I   K         GS  + RP +         L 
Sbjct: 227 DCLQRRGLMVSFGNSSGAVTGVNLGILNQK---------GSLYVTRPSLQGYITTREELT 277

Query: 290 DSLRELLLWAAKGLITIHIS--HTYSPSEANLAFSAIEDRKVIGKVMI 335
           ++  EL    A G+I + ++    Y   +A  A   +E R   G  ++
Sbjct: 278 EASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  195 bits (497), Expect = 3e-60
 Identities = 60/338 (17%), Positives = 106/338 (31%), Gaps = 29/338 (8%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           ME          T S+      I      P    +    + V+ +A  +N  ++  I   
Sbjct: 2   MEQHQVWAYQTKTHSVTLNSVDI------PALAADD---ILVQNQAIGINPVDWKFIKAN 52

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSELFP 117
                    VPG D +G +  VG  V +  +G  V    +L   GSFA+F V +   +  
Sbjct: 53  PIN-WSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMT 111

Query: 118 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 177
           +P       AAALP    T+  A   +  L+  + +L+    G V     Q+    G  +
Sbjct: 112 LPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLI-VGFGAVNNLLTQMLNNAGYVV 169

Query: 178 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 237
             V+  +         GV H+    ++               +    ++D V  +     
Sbjct: 170 DLVSA-SLSQALAAKRGVRHLYREPSQVT-------------QKYFAIFDAVNSQNAAAL 215

Query: 238 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL 297
           +  L     I+ I               +  +    G            +L      LL 
Sbjct: 216 VPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLT 275

Query: 298 WAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             A+G + I     +   +   A    E  K+   + +
Sbjct: 276 LIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  193 bits (492), Expect = 4e-59
 Identities = 83/372 (22%), Positives = 147/372 (39%), Gaps = 64/372 (17%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNY-------A 52
           M A+   ++G P            LS  E  +P+      V ++V+A  + +        
Sbjct: 1   MRAVRLVEIGKP------------LSLQEIGVPKP-KGPQVLIKVEAAGVCHSDVHMRQG 47

Query: 53  NYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------C------ 96
            +  +         LP   G + +G ++ VG  V  +  GD V          C      
Sbjct: 48  RFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIG 107

Query: 97  -----------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA 145
                      G    G++A++++    +     +  + + AA L  +  T++ A+  +A
Sbjct: 108 EEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-RKA 166

Query: 146 QLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 204
            L   + LLV+GA GG+G  AVQI K V GATII V    E ++  K  G D+V++ S +
Sbjct: 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ 226

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPAN 263
                + E  +  + KGVD + D    + T     K L    + +++G    ++    A 
Sbjct: 227 DP---LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLH-YHAP 282

Query: 264 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSA 323
           +  +      G   G+               ++  A  G +   I+ T    EAN A   
Sbjct: 283 LITLSEIQFVGSLVGNQS---------DFLGIMRLAEAGKVKPMITKTMKLEEANEAIDN 333

Query: 324 IEDRKVIGKVMI 335
           +E+ K IG+ ++
Sbjct: 334 LENFKAIGRQVL 345

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  190 bits (485), Expect = 5e-58
 Identities = 66/336 (19%), Positives = 131/336 (38%), Gaps = 29/336 (8%)

Query: 21  SPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
              +       IP+      + V++++ S+N  +  Q L         P V G D  G V
Sbjct: 16  DGNLFKTFNLDIPEP-KVHEILVKIQSISVNPVDTKQRLMDV---SKAPRVLGFDAIGVV 71

Query: 80  DAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT 136
           ++VG  V+ F  GD V    +    GS A++ + ++  +   PK      A +LP+   T
Sbjct: 72  ESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGIT 131

Query: 137 SHVALVHRAQLS------SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL 190
           ++  L     +S       G+ LL++  AGGVG  A QI K  G  +I  A   E I++ 
Sbjct: 132 AYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT 191

Query: 191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILV 249
           K +G D V++     +        K + ++ VD ++          + ++L+     I  
Sbjct: 192 KKMGADIVLNHKESLL-----NQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIAT 246

Query: 250 IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE---DSLRELLLWAAKGLITI 306
           I     +  +        K+ +    +  +  +++   +    + L ++     + +   
Sbjct: 247 IVAFENDQDLNALK---PKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQP 303

Query: 307 HISHTYSP---SEANLAFSAIEDRKVIGKVMIAFDD 339
             +             A   +E   +IGK++I  ++
Sbjct: 304 TTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  181 bits (461), Expect = 2e-54
 Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 35/352 (9%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+   K    T           L   E P P   +   + V VKA S+N  +Y     
Sbjct: 23  MKAVGYNKPAPIT-------DDASLLDIELPKPAP-AGHDILVEVKAVSVNPVDYKVRRS 74

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQSELF 116
              +      V G D +G V AVGP+V+ F+ GD V    ++   G+ A+F + D+  + 
Sbjct: 75  TPPDGTD-WKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVG 133

Query: 117 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQVLLVLGAAGGVGVAAVQIGK 171
             PK  D   AAALP+   T+  A   R  ++     +   +L++G AGGVG  AVQI +
Sbjct: 134 RKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIAR 193

Query: 172 -VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD-VLYDPV 229
                T+IA A   E  +++KSLG  HV+D S           + A  L     V     
Sbjct: 194 QRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLA-----AEVAALGLGAPAFVFSTTH 248

Query: 230 GGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289
             K   E   L+    +  +I     +       +   K  ++H     +  +     + 
Sbjct: 249 TDKHAAEIADLIAPQGRFCLI----DDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMS 304

Query: 290 DS---LRELLLWAAKGLITIHISHTYSP-SEANL--AFSAIEDRKVIGKVMI 335
           +    L ++     +G +   +++  SP + ANL  A + +E     GKV+I
Sbjct: 305 EQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVI 356

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  178 bits (453), Expect = 3e-53
 Identities = 56/363 (15%), Positives = 110/363 (30%), Gaps = 57/363 (15%)

Query: 22  PIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKY------------------- 61
            + LS      P       V +R++A+ LN ++   + G                     
Sbjct: 17  ELELSLDSIDTPHPGPD-EVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTAR 75

Query: 62  ---------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ 112
                      +       G++ +G V   G + +   +            ++Q+     
Sbjct: 76  VPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPA 135

Query: 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 172
            +   +P+G      A+  V   T+   +V   +L     L+   AA  +G    QI   
Sbjct: 136 DQCLVLPEGATPADGASSFVNPLTAL-GMVETMRLEGHSALVHTAAASNLGQMLNQICLK 194

Query: 173 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232
            G  ++ + R  E+   LK+ G  HV + ++ + +  + E L +    G  + +D  GG 
Sbjct: 195 DGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVS---TGATIAFDATGGG 251

Query: 233 LTKESLK-----------------LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG- 274
                +                        Q+ + G           N      W + G 
Sbjct: 252 KLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT--SPTEFNRNFGMAWGMGGW 309

Query: 275 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL--AFSAIEDRKVIGK 332
           L +   +          L++ ++   K     H S   S +E       +    R    K
Sbjct: 310 LLFPFLQKIGRERANA-LKQRVVAELKTTFASHYSKEISLAEVLDLDMIAVYNKRATGEK 368

Query: 333 VMI 335
            +I
Sbjct: 369 YLI 371

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  177 bits (451), Expect = 5e-50
 Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 33/309 (10%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           VR+ ++A  +N+ + L  LG Y     L    GS+ +G V   GP V+    GD V G  
Sbjct: 241 VRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMI 296

Query: 100 ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 159
              +F    VAD   +  +P G     AA++P+ F T++ ALV  A L  G+ LLV  AA
Sbjct: 297 P-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA 355

Query: 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
           GGVG+AA+Q+ +  GA + A A   +       L  +H+            ++FL A   
Sbjct: 356 GGVGMAAIQLARHLGAEVYATASEDKWQAV--ELSREHLASSRTCDF---EQQFLGATGG 410

Query: 220 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTVHGL 275
           +GVDV+ + + G+    SL++L  G + L +G        E+      +           
Sbjct: 411 RGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGV----------- 459

Query: 276 YWGSYKI-----HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 330
              SY+        P  + + L EL+      ++       +   +A  A   +   + +
Sbjct: 460 ---SYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHV 516

Query: 331 GKVMIAFDD 339
           GK+++    
Sbjct: 517 GKLVLTMPP 525

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  163 bits (414), Expect = 2e-47
 Identities = 68/365 (18%), Positives = 115/365 (31%), Gaps = 55/365 (15%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
             AL      + TV               P P L     V VRV+A ++N ++       
Sbjct: 12  QTALTVNDHDEVTVW-----------NAAPCPMLPR-DQVYVRVEAVAINPSDT-----S 54

Query: 61  YQEK-PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA--------ALGSFAQFIVAD 111
            + +        G+DY+GTV AVG +V++ +VGD V G            G+F+Q+ V  
Sbjct: 55  MRGQFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTR 114

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHR------------AQLSSGQVLLVLGAA 159
                 +PKG     AAALP    T+ +A+                  S    +LV G +
Sbjct: 115 GRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGS 174

Query: 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
                  +Q+ ++ G   IA           KS G + V D    ++  +++ + K    
Sbjct: 175 TATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTK---- 229

Query: 220 KGVDVLYDPVGGKLTKESL--KLLNWGAQILVI-GFASGEIPVIPANIALVKNWTVHGL- 275
             +    D +    +       +   G   + +  F                  T+ G  
Sbjct: 230 NNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEG 289

Query: 276 YWGSYKIHRPHVLEDS------LRELLLWAAKGLITIHISHTYSP--SEANLAFSAIEDR 327
                   RP   E+        R        G +  H                  +   
Sbjct: 290 STWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKG 349

Query: 328 KVIGK 332
           ++ G+
Sbjct: 350 ELSGE 354

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  149 bits (378), Expect = 3e-42
 Identities = 78/372 (20%), Positives = 141/372 (37%), Gaps = 74/372 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKA-----TSLNYANYL 55
           M+A+   ++G     + D  +P       P P       + ++V A     + +   +  
Sbjct: 1   MKAVQYTEIGSE-PVVVDIPTP------TPGP-----GEILLKVTAAGLCHSDIFVMD-- 46

Query: 56  QILGKYQEKP-PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------- 97
                  +    LP   G +  GTV  +G  V+ F VGD V       CG          
Sbjct: 47  ---MPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRE 103

Query: 98  ---------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV 142
                            + GS A++++ D +         D +AAA L  A  T + A+ 
Sbjct: 104 NYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAIS 163

Query: 143 H-RAQLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVD 200
                L  G   +V+G  GG+G   +QI + V  A +IAV    +++   + +G D  V 
Sbjct: 164 RVLPLLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK 222

Query: 201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPV 259
            S      +++E       +G   ++D VG + T   + +++     I V+G  +G    
Sbjct: 223 -SGAGAADAIRE---LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAK 278

Query: 260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 319
           +   + +    +V   YWG+            L E++  A  G + IH   T++  E   
Sbjct: 279 VGFFM-IPFGASVVTPYWGTRS---------ELMEVVALARAGRLDIHT-ETFTLDEGPA 327

Query: 320 AFSAIEDRKVIG 331
           A+  + +  + G
Sbjct: 328 AYRRLREGSIRG 339

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  149 bits (378), Expect = 3e-42
 Identities = 87/376 (23%), Positives = 150/376 (39%), Gaps = 75/376 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKA-----TSLNYANY 54
           ++A    +   P            L   +   P+L     V VR+       T L+    
Sbjct: 16  LKAARLHEYNKP------------LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQ- 62

Query: 55  LQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------C------ 96
               G + E  +P LP+  G +  G ++ V   V   + GD V          C      
Sbjct: 63  ----GMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAG 118

Query: 97  -----------GFAALGSFAQFIVADQSELFPVPKGCDLL---AAAALPVAFGTSHVALV 142
                      G    G FA+F+      +  +PK          A L  A  T++ A+ 
Sbjct: 119 EDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVK 178

Query: 143 H-RAQLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVD 200
                L  G  + ++G  GG+G  AVQ+ K +  AT+IA+    EK+K  + LG DHVVD
Sbjct: 179 KAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD 237

Query: 201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPV 259
              +     VK+ ++  + +GV+V  D VG + T   +  LL    +++++G+  GE+  
Sbjct: 238 ARRD----PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELR- 291

Query: 260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 319
            P    +    +  G   G+Y         + L EL+  A +G + + +   +   E N 
Sbjct: 292 FPTIRVISSEVSFEGSLVGNYV--------E-LHELVTLALQGKVRVEV-DIHKLDEIND 341

Query: 320 AFSAIEDRKVIGKVMI 335
               +E  +V+G+ ++
Sbjct: 342 VLERLEKGEVLGRAVL 357

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  148 bits (376), Expect = 5e-42
 Identities = 74/369 (20%), Positives = 139/369 (37%), Gaps = 64/369 (17%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            +A + +K  +P            LS  +  IP+      V +R+    +   +     G
Sbjct: 4   SKAALLKKFSEP------------LSIEDVNIPEP-QGEEVLIRIGGAGVCRTDLRVWKG 50

Query: 60  KYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------------C--------- 96
              +    LP + G + +GT+  VG  ++  K GD V             C         
Sbjct: 51  VEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICK 109

Query: 97  -----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS--S 149
                G    G F+++++   S           + AA L  A  TS  A+          
Sbjct: 110 NQIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKF 169

Query: 150 GQVLLVLGAAGGVGVAAVQIGK--VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207
            + ++++   GG+ V  +QI K  +   TI+ ++R  +   F   LG D+V ++ +    
Sbjct: 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD---- 225

Query: 208 PSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIAL 266
            +     K     G  +  D VG + T     KLL     I+++G     + +   + A+
Sbjct: 226 -AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAV 284

Query: 267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 326
             N  + G  +GS          D L +++  +  G I  +I       + N AF+ +++
Sbjct: 285 -WNKKLLGSNYGSLN--------D-LEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDE 333

Query: 327 RKVIGKVMI 335
            +V G+ +I
Sbjct: 334 GRVDGRQVI 342

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  143 bits (364), Expect = 3e-40
 Identities = 76/377 (20%), Positives = 140/377 (37%), Gaps = 75/377 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQI--- 57
           M+++V    G   V + +            IP++     VRV++ ++         +   
Sbjct: 1   MKSVVNDTDGI--VRVAES----------VIPEIKHQDEVRVKIASSG--------LCGS 40

Query: 58  -LGKYQEKPP--LPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------- 97
            L +  +      P   G ++SG +DAVG  V +   GD V       C           
Sbjct: 41  DLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFY 100

Query: 98  -------FAAL---GSFAQFIVADQSELFPVPKGCDLLAAAAL-PVAFGTSHVAL--VHR 144
                  F      G FA++IV  +  +F +P    +   A + P+      V L   H 
Sbjct: 101 SQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPIT-----VGLHAFHL 155

Query: 145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN 203
           AQ    + ++++G AG +G+ A+Q     GA  + A+   +EK+   KS G     + S 
Sbjct: 156 AQGCENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE 214

Query: 204 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGE--IPVI 260
            S           R+L+   ++ +  G   T + ++++    AQ+ ++G    +  +   
Sbjct: 215 MSAPQMQSVL---RELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSA 271

Query: 261 PANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEAN 318
                L K  TV G +            E + R       +  +++   I+H  S     
Sbjct: 272 TFGKILRKELTVIGSWMNYSSPWPGQEWETASR----LLTERKLSLEPLIAHRGSFESFA 327

Query: 319 LAFSAIEDRKVIGKVMI 335
            A   I    + GKV++
Sbjct: 328 QAVRDIARNAMPGKVLL 344

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  138 bits (350), Expect = 5e-38
 Identities = 77/346 (22%), Positives = 133/346 (38%), Gaps = 66/346 (19%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
            IP+      + V+V+A        +  +     G++   PP+    G ++ G V   G 
Sbjct: 41  GIPEPGPDD-LLVKVEACGICGTDRHLLH-----GEFPSTPPV--TLGHEFCGIVVEAGS 92

Query: 85  NVSNFKVGDTV-------CG-----------------FAAL---GSFAQFIVADQSELFP 117
            V +   G  +       CG                    +   G FA++++  + + F 
Sbjct: 93  AVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFE 152

Query: 118 VPKGCDLLAAAAL-PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
           +P   D +  A   P+A       L  V  + + +G  + +LG  G +G+  VQ+ ++ G
Sbjct: 153 IPLTLDPVHGAFCEPLA-----CCLHGVDLSGIKAGSTVAILG-GGVIGLLTVQLARLAG 206

Query: 175 AT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 233
           AT +I   R A K +  + +G    VD S   V+ ++          GVDV+ +  G   
Sbjct: 207 ATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAG-PVGLVPGGVDVVIECAGVAE 265

Query: 234 T-KESLKLLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291
           T K+S +L   G  ++++G       V I     L +   V G +        P V   +
Sbjct: 266 TVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSF------INPFVHRRA 319

Query: 292 LRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 335
             +L+   A G I I   IS   S  EA    S       + KV++
Sbjct: 320 A-DLV---ATGAIEIDRMISRRISLDEAPDVISNPAAAGEV-KVLV 360

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  139 bits (352), Expect = 1e-36
 Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 11/323 (3%)

Query: 29   EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN 88
                   S       V  TSLN+ + +   GK         +PG   +            
Sbjct: 1551 LHYALPASCQDRLCSVYYTSLNFRDVMLATGKL----SPDSIPGKWLTRDCMLGMEFSGR 1606

Query: 89   FKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
               G  V G       A  ++  Q   + VP    L  AA++P+ + T++ +LV R ++ 
Sbjct: 1607 DASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQ 1666

Query: 149  SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNE 204
             G+ +L+   +GGVG AA+ I    G  +      AEK  +L++    L      +  + 
Sbjct: 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT 1726

Query: 205  SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANI 264
            S     +  L+    KGVD++ + +  +  + S++ L    + L IG             
Sbjct: 1727 SFE---QHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMA 1783

Query: 265  ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI 324
              +KN T HG+   S         ++    L     +G++       +  ++   AF  +
Sbjct: 1784 VFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYM 1843

Query: 325  EDRKVIGKVMIAFDDMKSIRPRL 347
               K IGKV+I   + +      
Sbjct: 1844 AQGKHIGKVVIQVREEEQGPAPR 1866

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  127 bits (320), Expect = 2e-33
 Identities = 71/366 (19%), Positives = 133/366 (36%), Gaps = 73/366 (19%)

Query: 30  PIPQLNSSTAVRVRVKATS--------LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
           P P++   T + ++VKA                  IL       P+    G ++SG V  
Sbjct: 48  PEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPV--TLGHEFSGVVVE 105

Query: 82  VGPNV------SNFKVGDTV-------CG-----------------FAAL---GSFAQFI 108
            GP          F++G+ V       CG                        G+FA+++
Sbjct: 106 AGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYV 165

Query: 109 VADQSELFPVPKGCDL------LAAAAL--PVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160
             D    + + +   +        A +L  P +    +  +V    +  G  +++LG  G
Sbjct: 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAY-NAVIVRGGGIRPGDNVVILGG-G 223

Query: 161 GVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 219
            +G+AAV I K  GA+ +I       +    K LG DHV+D + E+ + +V ++      
Sbjct: 224 PIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGL-- 281

Query: 220 KGVDVLYDPVGGKLT-KESLKLLNW-----GAQILVIGFASGEIPVIPANIALVKNWTVH 273
            G  +  +  G        ++ + W      A + ++  A  +IP +   +  V+   + 
Sbjct: 282 -GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIP-LTGEVFQVRRAQIV 339

Query: 274 GLYWGSYKIHRPHVLEDSLRELLLWAAKGL-ITIHISHTYSPSEANLAFSAIEDRKVIGK 332
           G           H    +   ++   A G+ +T  IS T S  E       ++  K + K
Sbjct: 340 GSQG--------HSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVK 391

Query: 333 VMIAFD 338
           V +  +
Sbjct: 392 VTMLNE 397

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  123 bits (312), Expect = 7e-33
 Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 47/325 (14%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V+V+++A+ + + +     G +  KP LPF+PG +  G V AVG  VS  K GD V    
Sbjct: 30  VQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPW 89

Query: 96  -------C-----------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131
                  C                 G++  G + +++VAD + +  +P     +  A + 
Sbjct: 90  LYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPIL 149

Query: 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191
            A  T +  L        GQ +++ G  GG+G  AVQ  +  G  + AV     K+   +
Sbjct: 150 CAGVTVYKGLKV-TDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR 207

Query: 192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVI 250
            LG +  V+  +      +++     ++ G   +       K   +++ ++  G  I + 
Sbjct: 208 RLGAEVAVNARDTDPAAWLQK-----EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALN 262

Query: 251 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 310
           G   G+      ++ ++K  T+ G   G+          D L+E L +AA G +   +  
Sbjct: 263 GLPPGDFGTPIFDV-VLKGITIRGSIVGT--------RSD-LQESLDFAAHGDVKATV-S 311

Query: 311 TYSPSEANLAFSAIEDRKVIGKVMI 335
           T    + N  F  + + KV G+V++
Sbjct: 312 TAKLDDVNDVFGRLREGKVEGRVVL 336

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  123 bits (311), Expect = 9e-33
 Identities = 88/368 (23%), Positives = 149/368 (40%), Gaps = 59/368 (16%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V  +  +P              K    P + S   V VR+KA  + + +     G 
Sbjct: 1   MKAAVVEQFKEPLKI-----------KEVEKPTI-SYGEVLVRIKACGVCHTDLHAAHGD 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-----------C------------- 96
           +  KP LP +PG +  G V+ VGP V++ KVGD V           C             
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH 108

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G++  G +A++  A    +  +P       AA +  A  T++ AL        G+ 
Sbjct: 109 QKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-TGAKPGEW 167

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212
           + + G  GG+G  AVQ  K  G  ++AV  G EK++  K LG D VV+   E     +KE
Sbjct: 168 VAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE 226

Query: 213 FLKARKLKGVD-VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 271
                K+ GV   +   V     + +   +  G   +++G    E+P+   +  ++    
Sbjct: 227 -----KVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDT-VLNGIK 280

Query: 272 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 331
           + G   G          +  L+E L +AA+G +   I       + N  F  +   ++ G
Sbjct: 281 IIGSIVG-------TRKD--LQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQING 330

Query: 332 KVMIAFDD 339
           +V++  +D
Sbjct: 331 RVVLTLED 338

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  123 bits (310), Expect = 1e-32
 Identities = 79/374 (21%), Positives = 138/374 (36%), Gaps = 74/374 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
           M AL      +  +++ D           P+P+      + VRV+A S     L+   + 
Sbjct: 1   MRALAKLAPEE-GLTLVDR----------PVPEP-GPGEILVRVEAASICGTDLHIWKWD 48

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
               + + +PPL  V G ++SG V+AVGP V   +VGD V       C            
Sbjct: 49  AW-ARGRIRPPL--VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYH 105

Query: 98  ------FAAL---GSFAQFIVADQSELFPVPKGCDLLAAAAL-PVAFGTSHVAL--VHRA 145
                    +   G FA+++V      +  PK      AA L P        A+  V+  
Sbjct: 106 VCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFG-----NAVHTVYAG 160

Query: 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNE 204
              SG+ +L+ G AG +G+ A  + +  GA  I+       ++ F +    D +V+   E
Sbjct: 161 SGVSGKSVLITG-AGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEE 218

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 263
            ++  V+         GV+VL +  G      + L  L  G +  ++G  S  I    A 
Sbjct: 219 DLLEVVRRVTG----SGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAG 274

Query: 264 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAF 321
             +++  T  G+                          G + +   ++H    S    AF
Sbjct: 275 ELVMRGITAFGIAGRRLWQTWMQGTA--------LVYSGRVDLSPLLTHRLPLSRYREAF 326

Query: 322 SAIEDRKVIGKVMI 335
             +   + + KV++
Sbjct: 327 GLLASGQAV-KVIL 339

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  121 bits (306), Expect = 7e-32
 Identities = 81/377 (21%), Positives = 143/377 (37%), Gaps = 74/377 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
           M A++  K   P       +  +      P P       V ++V ATS     L+   + 
Sbjct: 5   MVAIMKTK---PGYGAELVEVDV------PKPGPGE---VLIKVLATSICGTDLHIYEWN 52

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
           +   + + KPP   + G + +G V  +GP V   +VGD V       CG           
Sbjct: 53  EW-AQSRIKPPQ--IMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYH 109

Query: 98  ------FAAL---GSFAQFIVADQSELFPVPKGCDLLAAAAL-PVAFGTSHVAL--VHRA 145
                    +   G FA++ V     ++  PK      A    P+       A+  V   
Sbjct: 110 VCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLG-----NAVDTVLAG 164

Query: 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNE 204
            + SG+ +L+ G AG +G+  + + K  GA  +I       + +  K +G D+V++   E
Sbjct: 165 PI-SGKSVLITG-AGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE 222

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 263
            V+  V +        GVDV  +  G  K  ++ L+ +    ++ ++G   G++ +   N
Sbjct: 223 DVVKEVMDITDGN---GVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNN 279

Query: 264 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSP-SEANLA 320
           + + K  T++    G    H           LL     G + +   I+H Y    +   A
Sbjct: 280 LIIFKALTIY----GITGRHLWETWYTVS-RLL---QSGKLNLDPIITHKYKGFDKYEEA 331

Query: 321 FSAIEDRKVIGKVMIAF 337
           F  +   K  GKV+   
Sbjct: 332 FELMRAGKT-GKVVFML 347

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  121 bits (305), Expect = 1e-31
 Identities = 73/380 (19%), Positives = 144/380 (37%), Gaps = 79/380 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
             +LV    GD  + + +           PIP+      V +R+ +       ++Y  Y 
Sbjct: 8   NLSLVVHGPGD--LRLENY----------PIPEP-GPNEVLLRMHSVGICGSDVHYWEYG 54

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
           +I G +  K P+  V G + SGTV+ VG +V + K GD V                    
Sbjct: 55  RI-GNFIVKKPM--VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYN 111

Query: 98  ------FAAL----GSFAQFIVADQSELFPVPKGCDLLAAAAL-PVAFGTSHVAL--VHR 144
                 F A     G+  +F   + +  + +P        A + P++     V +    R
Sbjct: 112 LSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLS-----VGIHACRR 166

Query: 145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN 203
             ++ G  +LV G AG +G+  + + K  GA  ++     A ++   K +G D V+ +S 
Sbjct: 167 GGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK 225

Query: 204 ESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPA 262
           ES     ++ ++ +     +V  +  G     +  +     G  ++++G  S     +P 
Sbjct: 226 ESPQEIARK-VEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTT-VPL 283

Query: 263 NIALVKNWTVHG--LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEAN 318
             A ++   + G   Y  ++    P  +           A   + +   ++H +   +A 
Sbjct: 284 LHAAIREVDIKGVFRYCNTW----PVAIS--------MLASKSVNVKPLVTHRFPLEKAL 331

Query: 319 LAFSAIEDRKVIGKVMIAFD 338
            AF   +    + K+M+  D
Sbjct: 332 EAFETFKKGLGL-KIMLKCD 350

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  120 bits (304), Expect = 1e-31
 Identities = 70/306 (22%), Positives = 122/306 (39%), Gaps = 46/306 (15%)

Query: 64  KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-----------C---------------- 96
              LP V G + +G V  +G NV  +K+GD             C                
Sbjct: 57  PVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL 116

Query: 97  -GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155
            G+   GSF Q+  AD  +   +P+G DL   A +  A  T + AL   A L +G  + +
Sbjct: 117 SGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKS-ANLMAGHWVAI 175

Query: 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 215
            GAAGG+G  AVQ  K  G  ++ +  G  K +  +S+G +  +D + E  I      + 
Sbjct: 176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIV---GAVL 232

Query: 216 ARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 274
                G   + +    +   + S + +      +++G  +G          +VK+ ++ G
Sbjct: 233 KATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG 292

Query: 275 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVM 334
            Y G+             RE L + A+GL+   I      S     +  +E  +++G+ +
Sbjct: 293 SYVGNRA---------DTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYV 342

Query: 335 IAFDDM 340
           +   D 
Sbjct: 343 V---DT 345

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  120 bits (302), Expect = 4e-31
 Identities = 69/391 (17%), Positives = 133/391 (34%), Gaps = 82/391 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
             A+V  K   P +   +                    ++ V + +       ++     
Sbjct: 18  AHAMVLEKFNQP-LVYKE--------FEISDIPRG---SILVEILSAGVCGSDVHMFR-- 63

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN-----FKVGDTV-------CG------ 97
              G+     PLP + G + +G V  V     +      K GD +       CG      
Sbjct: 64  ---GEDPR-VPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCK 119

Query: 98  -----------------------FAALGSFAQFIV-ADQSELFPVPKGCDLLAAAALPVA 133
                                      G ++  IV   ++++  V +  DL   A    +
Sbjct: 120 VSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCS 179

Query: 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS 192
             T++ A     +  +G+ +++ GA G +G+  V I +  GA  +I +A    ++K  + 
Sbjct: 180 GATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238

Query: 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG 251
           +G D  ++    SV    K  +     +G D + +  G      E  +LL  G    V G
Sbjct: 239 IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG 298

Query: 252 FA--SGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH-- 307
            A     +P       ++KN T  G++                 + +   ++    +   
Sbjct: 299 VAVPQDPVPFKVYEWLVLKNATFKGIWVSDTS---------HFVKTVSITSRNYQLLSKL 349

Query: 308 ISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338
           I+H     EAN A   +E R+ + KV++  +
Sbjct: 350 ITHRLPLKEANKALELMESREAL-KVILYPE 379

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score =  112 bits (283), Expect = 5e-30
 Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 11/202 (5%)

Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174
           + P+P       AA   VA+ T+  +L    +LS G+ +L+  A GGVG+AAV I K+ G
Sbjct: 4   VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIG 63

Query: 175 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234
           A I   A    K + L  LGV++V D  +        E L+     GVDV+ + + G+  
Sbjct: 64  ARIYTTAGSDAKREMLSRLGVEYVGDSRSVDF---ADEILELTDGYGVDVVLNSLAGEAI 120

Query: 235 KESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 290
           +  +++L  G + + +G    +A   + +        K+ +   +        +P     
Sbjct: 121 QRGVQILAPGGRFIELGKKDVYADASLGLAALA----KSASFSVVDLDLNLKLQPARYRQ 176

Query: 291 SLRELLLWAAKGLITIHISHTY 312
            L+ +L   A G + +     +
Sbjct: 177 LLQHILQHVADGKLEVLPVTAF 198

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  115 bits (291), Expect = 1e-29
 Identities = 79/353 (22%), Positives = 136/353 (38%), Gaps = 68/353 (19%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           PIP+      V +++         ++Y  + +I   +  K P+  V G + SGTV  VG 
Sbjct: 22  PIPEP-KEDEVLLQMAYVGICGSDVHYYEHGRI-ADFIVKDPM--VIGHEASGTVVKVGK 77

Query: 85  NVSNFKVGDTV-------CG-----------------FAAL----GSFAQFIVADQSELF 116
           NV + K GD V       C                  F A     G+ A++ V       
Sbjct: 78  NVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCH 137

Query: 117 PVPKGCDLLAAAAL-PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC 173
            +P    L   A L P++     V +    RA +  G  +LV+G AG +G+ +V   K  
Sbjct: 138 KLPDNVSLEEGALLEPLS-----VGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY 191

Query: 174 GATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
           GA ++  AR   +++  K+ G D   VVD + E     ++  +++      +V  D  G 
Sbjct: 192 GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER-IRSAIGDLPNVTIDCSGN 250

Query: 232 KLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG--LYWGSYKIHRPHVL 288
           +      + +   G  ++++G  S  +  +P   A  +   +     Y   Y    P  L
Sbjct: 251 EKCITIGINITRTGGTLMLVGMGSQMVT-VPLVNACAREIDIKSVFRYCNDY----PIAL 305

Query: 289 EDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKV-IGKVMIAFD 338
           E          A G   +   ++H++   +   AF A   +     KVMI+  
Sbjct: 306 E--------MVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  109 bits (274), Expect = 3e-27
 Identities = 66/392 (16%), Positives = 122/392 (31%), Gaps = 80/392 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
           M+A++ +   +  V + D              +L+S   +++R              N  
Sbjct: 1   MKAIIVKP-PNAGVQVKDV----------DEKKLDSYGKIKIRTIYNGICGADREIVNGK 49

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
             L    +      V G +  G V+        F  GD V       CG           
Sbjct: 50  LTLSTLPKGKD-FLVLGHEAIGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPD 105

Query: 98  ------FAAL------GSFAQFIVADQSELFPVPKGCDLLAAAALPVA-----------F 134
                 F         G   ++   D   L  +PK  + +   A P+A            
Sbjct: 106 FCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEV 165

Query: 135 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG 194
                         + + +LV+G  G +GV    + +  G  +    R          + 
Sbjct: 166 QKRVPVWTCDDGTLNCRKVLVVG-TGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE 224

Query: 195 VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG--GKLTKESLKLLNWGAQILVIGF 252
                  ++ +    +K+      +   DV+ D  G    +    + LL     + + GF
Sbjct: 225 ETKTNYYNSSNGYDKLKD-----SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGF 279

Query: 253 -ASGEIPVIPANIALV--KNWTVHGLYWGSYKIHRPHVLE--DSLRELLLWAAKGLITIH 307
             SG +P+    +  +   N T+ GL     K H    +    S + L   AAK LIT  
Sbjct: 280 STSGSVPLDYKTLQEIVHTNKTIIGLV-NGQKPHFQQAVVHLASWKTLYPKAAKMLIT-- 336

Query: 308 ISHTYSPSEANLAFSAIEDRKVIG-KVMIAFD 338
              T S ++       + +++    K+ I ++
Sbjct: 337 --KTVSINDEKELLKVLREKEHGEIKIRILWE 366

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  108 bits (272), Expect = 4e-27
 Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 24/234 (10%)

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFG-------TS 137
             S F  G  V        +    ++D   L  +    +      L +A G       T+
Sbjct: 79  KNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLT--EWPDKLPLSLALGTIGMPGLTA 133

Query: 138 HVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH 197
           +  L+    +  G+ +LV  AAG VG    QI K+ G  ++  A   EKI +LK +G D 
Sbjct: 134 YFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDA 193

Query: 198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-- 255
             +        S++E LK     G D  +D VGG+     L  +    +I + G  S   
Sbjct: 194 AFNYKTV---NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYN 250

Query: 256 --EIPVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 305
             +      +    + K   + G     +   +  V E +LR+L+ W  +G I 
Sbjct: 251 RMDQLPPGPSPESIIYKQLRIEGFIVYRW---QGDVREKALRDLMKWVLEGKIQ 301

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  108 bits (272), Expect = 5e-27
 Identities = 70/367 (19%), Positives = 134/367 (36%), Gaps = 72/367 (19%)

Query: 19  EKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGS 73
            ++   L ++    +      V V V++T      +++  +  I G    +     V G 
Sbjct: 23  SEASPSL-ESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI-GPMIVECDH--VLGH 78

Query: 74  DYSGTVDAVGPNVSNFKVGDTV-------CG-----------------FAAL----GSFA 105
           + +G V AV P+V + KVGD V       C                  F +     G   
Sbjct: 79  ESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLR 138

Query: 106 QFIVADQSELFPVPKGCDL-LAAAAL--PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAG 160
           +++         +    ++     A+  P++     VAL  + RA +  G  +L+ G AG
Sbjct: 139 RYVNHPAVWCHKIG---NMSYENGAMLEPLS-----VALAGLQRAGVRLGDPVLICG-AG 189

Query: 161 GVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIP-SVKEFLKARK 218
            +G+  +   K  GA  ++       ++KF K +  + V           S K+ +++  
Sbjct: 190 PIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFG 249

Query: 219 LKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG--L 275
                V  +  G + +   ++  + +G ++ VIG    EI  IP   A V+   +     
Sbjct: 250 GIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQ-IPFMRASVREVDLQFQYR 308

Query: 276 YWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRK-VIGK 332
           Y  ++    P  +             GL+ +   ++H +   +A  AF    D K    K
Sbjct: 309 YCNTW----PRAIR--------LVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIK 356

Query: 333 VMIAFDD 339
           V I   +
Sbjct: 357 VQIQSLE 363

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 98.5 bits (246), Expect = 1e-23
 Identities = 65/229 (28%), Positives = 95/229 (41%), Gaps = 24/229 (10%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPL----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
           V VRV  +S+NY + L  +        +    PFVPG D +G V  V      F+ GD V
Sbjct: 33  VLVRVHYSSVNYKDGLASIPD----GKIVKTYPFVPGIDLAGVV--VSSQHPRFREGDEV 86

Query: 96  ------CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV---ALVHRAQ 146
                  G    G ++++       L P+PKG  L  A A+  A  T+ +    L     
Sbjct: 87  IATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGL 146

Query: 147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206
                 +LV GA GGVG  AV +    G T+ A    A +  +L+ LG   V+    + +
Sbjct: 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLARE-DVM 205

Query: 207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 255
              ++   K R    V    DPVGG+     L  + +G  + V G   G
Sbjct: 206 AERIRPLDKQRWAAAV----DPVGGRTLATVLSRMRYGGAVAVSGLTGG 250

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 98.2 bits (245), Expect = 1e-23
 Identities = 62/239 (25%), Positives = 91/239 (38%), Gaps = 26/239 (10%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPL----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
           V ++V  + +NY + L           +    P + G D +GTV  V  N   F  GD V
Sbjct: 34  VLIKVAYSGINYKDGLAGKAG----GNIVREYPLILGIDAAGTV--VSSNDPRFAEGDEV 87

Query: 96  ------CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT---SHVALVHRAQ 146
                  G +  G  +++       L P+P+   L  A     A  T   S   L     
Sbjct: 88  IATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGL 147

Query: 147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206
                 +LV GA GGVG  AV +    G  ++A     E   +LK LG   V+    +  
Sbjct: 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISRE-DVY 206

Query: 207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA 265
             ++K   K +    V    DPVGGK     L  + +G  + V G   G    +PA + 
Sbjct: 207 DGTLKALSKQQWQGAV----DPVGGKQLASLLSKIQYGGSVAVSGLTGG--GEVPATVY 259

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 97.2 bits (243), Expect = 4e-23
 Identities = 52/255 (20%), Positives = 87/255 (34%), Gaps = 32/255 (12%)

Query: 68  PFVPGSDYSGTVDAVGP----NVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCD 123
            + PG    G    V         ++K GD + G     ++ ++ V              
Sbjct: 71  AYTPGQPIQGY--GVSRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQ-- 123

Query: 124 LLAAAALPVAFG-------TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT 176
                 L    G       T++           G+ + V  A+G VG    Q+ K+ G  
Sbjct: 124 -HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182

Query: 177 IIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235
           ++  A   EK+  LK+  G D   +   E     +   LK     G+D+ ++ VGGK+  
Sbjct: 183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEE---SDLTAALKRCFPNGIDIYFENVGGKMLD 239

Query: 236 ESLKLLNWGAQILVIGFASG---EIPVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLED 290
             L  +N   +I V G  S    E      N++  + K   + G     +          
Sbjct: 240 AVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFY----DKYSK 295

Query: 291 SLRELLLWAAKGLIT 305
            L  +L    +G IT
Sbjct: 296 FLEFVLPHIREGKIT 310

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 95.5 bits (238), Expect = 2e-22
 Identities = 68/280 (24%), Positives = 107/280 (38%), Gaps = 42/280 (15%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+AL+  +    T++         L   +          V V V  +SLNY + L I GK
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGD----------VTVDVHWSSLNYKDALAITGK 50

Query: 61  YQEKPPL----PFVPGSDYSGTVDAVGPNVSNFKVGDTV------CGFAALGSFAQFIVA 110
                 +    P +PG D++GTV         F  G  V       G    G  A+    
Sbjct: 51  ----GKIIRHFPMIPGIDFAGTV--HASEDPRFHAGQEVLLTGWGVGENHWGGLAERARV 104

Query: 111 DQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ---LSSGQVLLVLGAAGGVGVAAV 167
               L  +P G     A  +  A  T+ + ++             ++V GA+GGVG  AV
Sbjct: 105 KGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAV 164

Query: 168 QIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL-KGV-DVL 225
            +    G  + AV+       +LKSLG + ++            EF ++R L K +    
Sbjct: 165 ALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRD---------EFAESRPLEKQLWAGA 215

Query: 226 YDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA 265
            D VG K+  + L  +N+G  +   G A G    +P  + 
Sbjct: 216 IDTVGDKVLAKVLAQMNYGGCVAACGLAGG--FALPTTVM 253

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 94.7 bits (236), Expect = 4e-22
 Identities = 61/362 (16%), Positives = 110/362 (30%), Gaps = 74/362 (20%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           P P+   S    VR                    G  + +  L  V G +  G V  V P
Sbjct: 19  PRPEP-ESGEALVRTLRVGVCGTDHEVIAGGHG-GFPEGEDHL--VLGHEAVGVV--VDP 72

Query: 85  NVSNFKVGDTV---------CG-----------------FAAL------GSFAQFIVADQ 112
           N +  + GD V          G                 +         G  ++F  + +
Sbjct: 73  NDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPE 132

Query: 113 SELFPVPKGCDLLAAAA--LPVAF-GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQI 169
             L  +P+    L      + +      H      A         VLG  G +G+  + +
Sbjct: 133 KYLVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLG-NGSLGLLTLAM 191

Query: 170 GKVCGA---TIIAVARG---AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 223
            KV       +  + R       I  ++ L   +V   S ++ +  V +       + +D
Sbjct: 192 LKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVD--SRQTPVEDVPD-----VYEQMD 244

Query: 224 VLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA----LVKNWTVHGLYWG 278
            +Y+  G  K   +S++ L       ++G  S     + A       ++ N  + G    
Sbjct: 245 FIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSV-N 303

Query: 279 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338
           S+  H         +    +  + L+T      +  SE   AF   +D     K  I F 
Sbjct: 304 SHVEHFEAATVTFTKLPKWF-LEDLVT----GVHPLSEFEAAF---DDDDTTIKTAIEFS 355

Query: 339 DM 340
            +
Sbjct: 356 TV 357

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 77/347 (22%), Positives = 134/347 (38%), Gaps = 69/347 (19%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT++ + +   + G   E    P + G   +G V++VG  V+  K GDTV    
Sbjct: 34  VRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLY 92

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         +    +F+++ V  
Sbjct: 93  IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
              +  +     L     L     T + A V+ A+L  G V  V G  GGVG+A +   K
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCK 211

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
           V GA+ II V    +K    K  G    ++  + S    ++E L      GVD  ++ +G
Sbjct: 212 VAGASRIIGVDINKDKFARAKEFGATECINPQDFS--KPIQEVLIEMTDGGVDYSFECIG 269

Query: 231 -GKLTKESLKLLN--WGAQILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-- 284
             K+ + +L+  +  WG  ++V +  +  EI   P  +   + W   G  +G +K     
Sbjct: 270 NVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWK--GTAFGGWKSVESV 327

Query: 285 PHVLEDSLR-ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 330
           P ++ + +  ++ +      +T    H  S  E N AF  +   K I
Sbjct: 328 PKLVSEYMSKKIKV---DEFVT----HNLSFDEINKAFELMHSGKSI 367

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 33/241 (13%)

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFG-------TS 137
             +N   GD V  F     +   ++ D + L  V      L    L    G       TS
Sbjct: 92  KHTNLTKGDFVTSF--YWPWQTKVILDGNSLEKVDPQ---LVDGHLSYFLGAIGMPGLTS 146

Query: 138 HVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS-L 193
            + +  +  +++G  + ++V GAAG  G  A QIG   G + ++ +    EK   L S L
Sbjct: 147 LIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL 206

Query: 194 GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA 253
           G D  ++   ++V     E L+     GVDV +D VGG ++   +  +N  + I++ G  
Sbjct: 207 GFDAAINYKKDNV----AEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQI 262

Query: 254 SG-------EIPVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 304
           S          P+ PA  A    +N T       +YK       E  + +L  W  +G +
Sbjct: 263 SQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK----DKFEPGILQLSQWFKEGKL 318

Query: 305 T 305
            
Sbjct: 319 K 319

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 91.8 bits (229), Expect = 5e-21
 Identities = 81/363 (22%), Positives = 135/363 (37%), Gaps = 87/363 (23%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V V+V AT + + + +    KY    PLP V G + SG ++A+GPNV+  +VGD V    
Sbjct: 34  VLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY 91

Query: 96  --CG-------------------------------------------FAALGSFAQFIVA 110
             CG                                           F A  SFA + ++
Sbjct: 92  GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALS 151

Query: 111 DQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG 170
            ++    V K   +     L     T   A ++  +++     +  GA G VG++A+   
Sbjct: 152 RENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAA 210

Query: 171 KVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229
           KVCGA  IIAV     +++  K LG  HV++   +  + ++KE        GV+   +  
Sbjct: 211 KVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG----GVNFALEST 266

Query: 230 G-GKLTKESLKLLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHV 287
           G  ++ K+ +  L    +I V+G            N  L+   T+ G+  GS     P  
Sbjct: 267 GSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS---P-- 321

Query: 288 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM---KS 342
            +  + EL+    +G       +           AF  I           A  D     +
Sbjct: 322 -KKFIPELVRLYQQGKFPFDQLVKF--------YAFDEINQ---------AAIDSRKGIT 363

Query: 343 IRP 345
           ++P
Sbjct: 364 LKP 366

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 74/358 (20%), Positives = 138/358 (38%), Gaps = 77/358 (21%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR++V AT +   +      K +     P V G + +G V++VGP V+NFK GD V    
Sbjct: 36  VRIQVIATCVCPTDINATDPKKK--ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFF 93

Query: 96  ---CG---------------------------------------------FAALGSFAQF 107
              C                                              F  + SF+Q+
Sbjct: 94  APQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY 153

Query: 108 IVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV 167
            V  ++ L  V    +L     +   F + + A ++ A+++ G    V G  G VG++A+
Sbjct: 154 TVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAI 212

Query: 168 QIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226
              K+ GA+ IIA+    EK    K+LG    ++         V++ +      GVD   
Sbjct: 213 IGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELD--KPVQDVITELTAGGVDYSL 270

Query: 227 DPVG-GKLTKESLKLLN--WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH 283
           D  G  +  K ++      WG+   V+G    E+ +   +  ++   +++G ++G +K  
Sbjct: 271 DCAGTAQTLKAAVDCTVLGWGSCT-VVGAKVDEMTIPTVD--VILGRSINGTFFGGWKSV 327

Query: 284 R--PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
              P+++ D               +   ++H       N A   +++ K I + ++ F
Sbjct: 328 DSVPNLVSDYK--------NKKFDLDLLVTHALPFESINDAIDLMKEGKSI-RTILTF 376

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 69/347 (19%), Positives = 125/347 (36%), Gaps = 70/347 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT +  ++   + G      PLP + G + +G V+++G  V+  + GD V    
Sbjct: 36  VRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +F+Q+ V D
Sbjct: 94  TPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 153

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           +  +  +     L     +   F T + + V  A+++ G    V G  GGVG++ +   K
Sbjct: 154 EISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCK 212

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
             GA  II V    +K    K +G    V+  +      ++E L      GVD  ++ +G
Sbjct: 213 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYK--KPIQEVLTEMSNGGVDFSFEVIG 270

Query: 231 -GKLTKESLKLLN--WGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWGSYKIHR-- 284
                  +L      +G  ++V        + + P  +   + W   G  +G +K     
Sbjct: 271 RLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWK--GAIFGGFKSKDSV 328

Query: 285 PHVLEDSLR-ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 330
           P ++ D +  +  L     LIT    H     + N  F  +   + I
Sbjct: 329 PKLVADFMAKKFAL---DPLIT----HVLPFEKINEGFDLLRSGESI 368

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 59/347 (17%), Positives = 122/347 (35%), Gaps = 72/347 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ A+ +  ++   +          P + G +  G V+++G  V+  K GD V    
Sbjct: 37  VRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLF 94

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                              +F ++ V  
Sbjct: 95  VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
              +  +     L  +  +   F T + A V+ A+++ G    V G  GGVG +A+   K
Sbjct: 155 DIAVAKIDPKAPL-ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCK 212

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
             GA+ II V    +K      LG    ++  +      + E +  +   GVD   +  G
Sbjct: 213 AAGASRIIGVGTHKDKFPKAIELGATECLNPKDYD--KPIYEVICEKTNGGVDYAVECAG 270

Query: 231 -GKLTKESLKLLN--WGAQILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-P 285
             +    +L+      G  +++ +   +  +P+ P  +   ++    G  +G +K     
Sbjct: 271 RIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLK--GSVFGGFKGEEVS 328

Query: 286 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI 330
            +++D +        K  I +   +S   +  + N AF  +   + +
Sbjct: 329 RLVDDYM--------KKKINVNFLVSTKLTLDQINKAFELLSSGQGV 367

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 72/353 (20%), Positives = 131/353 (37%), Gaps = 69/353 (19%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           +R+++ AT + + +   +     +    P V G + +G V++VGP V+ F+ G+ V    
Sbjct: 36  IRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLF 94

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +F+Q+ V +
Sbjct: 95  ISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVN 154

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171
           Q  +  +     L     L     T   A V+ A++  G    V G  G VG+AAV    
Sbjct: 155 QIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCH 213

Query: 172 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230
             GA  IIAV    +K +  K  G    V+ ++ S    + + L      GVD   + VG
Sbjct: 214 SAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHS--EPISQVLSKMTNGGVDFSLECVG 271

Query: 231 -GKLTKESLKLLN--WGAQILVIGFA-SGEIPVIPANIALVKNWTVHGLYWGSYKIHR-- 284
              + + +L+     WG  + ++G+    ++   P  +   + W   G  +G +K     
Sbjct: 272 NVGVMRNALESCLKGWGVSV-LVGWTDLHDVATRPIQLIAGRTWK--GSMFGGFKGKDGV 328

Query: 285 PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337
           P +++  L        K  +   I+H       N A   ++  K I + +++ 
Sbjct: 329 PKMVKAYL------DKKVKLDEFITHRMPLESVNDAIDLMKHGKCI-RTVLSL 374

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 69/386 (17%), Positives = 123/386 (31%), Gaps = 88/386 (22%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG- 59
           M+      +G        EK           P      A+ VR  A +            
Sbjct: 1   MKGFAMLSIGKVGW---IEK---------EKPAPGPFDAI-VRPLAVA--------PCTS 39

Query: 60  ----KYQEKPPL--PFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGFAAL----- 101
                ++         + G +  G V  VG  V +FK GD V           +      
Sbjct: 40  DIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGY 99

Query: 102 ------------------GSFAQFI---VADQSELFPVPKGCDLLAAAALPVAFGTSHVA 140
                             G F +F     AD + L  +PK   L AA  +P    T    
Sbjct: 100 HQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMN-LAHLPKEIPLEAAVMIPDMMTTGFHG 158

Query: 141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVV 199
               A +  G  + V+G  G VG+ +V      GA  I AV             G   ++
Sbjct: 159 -AELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDII 216

Query: 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG----FAS 254
           +  N  ++  + +    +   GVD +    G   T  +++K++  G+ I  +       +
Sbjct: 217 NYKNGDIVEQILKATDGK---GVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDN 273

Query: 255 GEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI--TIHISHTY 312
            +IP     + +  +  +HG   G     R       +  L+       +  +  ++H +
Sbjct: 274 IDIPRSEWGVGM-GHKHIHG---GLCPGGRLR-----MERLIDLVFYKRVDPSKLVTHVF 324

Query: 313 SP-SEANLAFSAIEDRK--VIGKVMI 335
                   AF  ++D+   +I K ++
Sbjct: 325 RGFDNIEKAFMLMKDKPKDLI-KPVV 349

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 37/173 (21%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P VPG +  G V  VG  V    VGD V                      C         
Sbjct: 71  PLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYAS 130

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G    G ++  +VA++  +   P    L   A L  A  T +  L +      G+ 
Sbjct: 131 IYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKH 190

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVDHVVDLSNE 204
           + ++G  GG+G  AV+  K  G+ +  ++    K +  LK+ G D  +   ++
Sbjct: 191 IGIVG-LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ 242

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 49/173 (28%), Positives = 67/173 (38%), Gaps = 37/173 (21%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P VPG +  G V  VG +VS F VGD V                      C         
Sbjct: 64  PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYND 123

Query: 97  ----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
               G    G FA+  V  Q  +  +P+G  +  AA L  A  T +  L H      G  
Sbjct: 124 VYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLR 183

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKSLGVDHVVDLSNE 204
             +LG  GGVG   V+I K  G  +  ++   +K +  L+ LG D  V  S++
Sbjct: 184 GGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ 235

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 70.3 bits (173), Expect = 9e-14
 Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 39/175 (22%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P VPG +  G V AVG  V  +  GD V                      C         
Sbjct: 77  PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 136

Query: 97  -----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAA-LPVAFGTSHVALVHRAQLSSG 150
                    LG ++Q IV  +  +  +    + LAA A L  A  T++  L H  Q   G
Sbjct: 137 PTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPG 195

Query: 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES 205
           + + V+G  GG+G   +++    GA ++A      K +  K+LG D VV+  N  
Sbjct: 196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNAD 249

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 39/169 (23%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV-----------C-------------------- 96
           P +PG + +G +  VG  V  FK+GD V           C                    
Sbjct: 59  PMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDC 118

Query: 97  ------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSG 150
                     +G ++  IV D++ +  V K   L   A L  A  T++  L   ++++ G
Sbjct: 119 LDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKF-SKVTKG 177

Query: 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 199
             + V G  GG+G  AV+     GA +   AR   K +   S+GV H  
Sbjct: 178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY 225

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 39/199 (19%), Positives = 65/199 (32%), Gaps = 51/199 (25%)

Query: 77  GTVDAVGPNVSNFKVGDTV----------C-----------------------GFAALGS 103
           G V   G +V N ++GD V          C                       G+  +G 
Sbjct: 71  GEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGD 130

Query: 104 F----AQFI---VADQSELFPVPKGCD----LLAAAALPVAFGTSHVALVHRAQLSSGQV 152
           +    A+++    AD + L  +P        +     L     T +      A +  G  
Sbjct: 131 WTGGQAEYVLVPYADFN-LLKLPDRDKAMEKIRDLTCLSDILPTGYHG-AVTAGVGPGST 188

Query: 153 LLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211
           + V GA G VG+AA    ++ GA  +I       ++   K+ G +      +  +   + 
Sbjct: 189 VYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIA 247

Query: 212 EFLKARKLKGVDVLYDPVG 230
             L       VD   D VG
Sbjct: 248 ALLGEP---EVDCAVDAVG 263

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 63.7 bits (156), Expect = 2e-11
 Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 44/185 (23%)

Query: 68  PFVPGSDYSGTVDAVGPNV-SNFKVGDTV-----------C------------------- 96
           P V G +  G V  +GP   S  KVG  V           C                   
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 97  -----GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 151
                G+ + G +A ++   +  + P+P+      AA L     T +  LV       G+
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGK 181

Query: 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211
            + ++G  GG+G     I K  GA    ++R + K +    +G DH +    E       
Sbjct: 182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEE------G 234

Query: 212 EFLKA 216
           ++ + 
Sbjct: 235 DWGEK 239

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 61.5 bits (150), Expect = 8e-11
 Identities = 40/200 (20%), Positives = 64/200 (32%), Gaps = 52/200 (26%)

Query: 77  GTVDAVGPNVSNFKVGDTV-------CGF--------------------AALGSF----- 104
           G V   G +V    +GD V       CG                     A LG+F     
Sbjct: 70  GEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLK 129

Query: 105 ------AQFI-V--ADQSELFPVPKG--CDLLAAAALPVA--FGTSHVALVHRAQLSSGQ 151
                 A+++ V  AD   L                  ++    T        A +  G 
Sbjct: 130 GWSGGQAEYVLVPYADYM-LLKFGDKEQAMEKIKDLTLISDILPTGFHG-CVSAGVKPGS 187

Query: 152 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 210
            + + GA G VG  A    ++ GA  +I   +  E++K L   G + +   ++  +   +
Sbjct: 188 HVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQI 246

Query: 211 KEFLKARKLKGVDVLYDPVG 230
            + L       VD   D VG
Sbjct: 247 DQILGKP---EVDCGVDAVG 263

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVK 211
           + + GA G  G+  +      G  +  + R + ++          VV D+   + +    
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADV---- 61

Query: 212 EFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 249
                + + G D +   +G +       +++ GA+ +V
Sbjct: 62  ----DKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIV 95

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 153 LLVLGAAGGVGVAAVQ--IGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSN-ESVIP 208
           + V GA G +G   +Q  + KV  + IIA+ R  EK   L   GV+    D +  ES+  
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62

Query: 209 SVKEFLKARKLKGVDVLY 226
           +           GV  L 
Sbjct: 63  A---------FAGVSKLL 71

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 13/79 (16%)

Query: 152 VLLVLGAAGGVGVAAVQ--IGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSN-ESVI 207
           ++ + GA G +G   ++  +  V  + I+A+ R   K + L + G+     D  +  ++ 
Sbjct: 1   MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALT 60

Query: 208 PSVKEFLKARKLKGVDVLY 226
            +         L+GV+ L 
Sbjct: 61  SA---------LQGVEKLL 70

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 10/99 (10%)

Query: 154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213
           LV+GA G V    +   K  G   +A+ R  E+   L+  G   +V  + E         
Sbjct: 25  LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHA--- 81

Query: 214 LKARKLKGVDVLYDPVG--GKLTKESLKLLNWGAQILVI 250
                   +D +    G       +   L++    I  I
Sbjct: 82  -----FASIDAVVFAAGSGPHTGADKTILIDLWGAIKTI 115

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 149 SGQVLLVLGAAGGVGVA-AVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESV 206
           +G+  L+ GA+ G+G A A  + K  G+ +I      EK+K L + L  ++ +++ N + 
Sbjct: 13  TGKTSLITGASSGIGSAIARLLHK-LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71

Query: 207 IPSVKEFLKARKLKGVDVL 225
                  +   K   +D+L
Sbjct: 72  KEECSNLIS--KTSNLDIL 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	347
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.94
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.0
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.87
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.82
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.81
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.75
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.62
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.35
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.33
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.3
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.26
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.25
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.12
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.07
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.05
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.99
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.99
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.98
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.98
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.98
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.94
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.91
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.91
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.86
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.86
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.86
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.85
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.84
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.83
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.83
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.81
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.79
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.78
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.78
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.76
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.76
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.75
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.74
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.73
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.7
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.69
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.68
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.67
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.67
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.67
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.67
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.66
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.66
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.66
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.65
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.65
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.65
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.65
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.65
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.64
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.64
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.63
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.63
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.63
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.63
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.63
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.63
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.63
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.62
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.62
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.62
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.62
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.62
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.61
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.61
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.61
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.61
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.61
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.61
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.6
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.6
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.6
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.59
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.59
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.58
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.58
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.58
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.58
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.58
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.57
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.57
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.57
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.57
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.56
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.56
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.56
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.56
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.55
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.55
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.55
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.55
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.54
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.54
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.54
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.54
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.53
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.53
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.53
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.52
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.52
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.52
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.52
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.51
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.51
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.51
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.51
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.51
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.51
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.51
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.5
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.5
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.5
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.49
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.49
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.49
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.49
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.49
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.49
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.49
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.48
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.48
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.48
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.48
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.48
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.47
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.47
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.47
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.47
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.47
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.47
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.46
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.46
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.45
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.45
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.45
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.45
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.45
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.44
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.44
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.44
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.43
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.43
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.42
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.42
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.42
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.42
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.41
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.41
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.41
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.41
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.4
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.39
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.39
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.39
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.39
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.38
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.38
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.38
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.38
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.38
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.38
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.37
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.37
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.37
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.37
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.36
1spx_A	278	Short-chain reductase family member (5L265); paral	97.36
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.35
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.35
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.35
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.34
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.34
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.34
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.32
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.32
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.32
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.32
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.31
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.28
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.28
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.28
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.28
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.26
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.26
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.26
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.26
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.25
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.25
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.24
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.24
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.23
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.23
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.23
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.23
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.22
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.22
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.21
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.21
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.21
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.21
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.2
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.2
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.2
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.18
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.17
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.16
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.16
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.16
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.15
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.15
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.15
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.15
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.15
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.15
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.13
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.13
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.13
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.12
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.12
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.12
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.12
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.11
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.11
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.1
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.1
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.1
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.09
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.08
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.06
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.06
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.06
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.06
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	97.05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.05
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.05
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.04
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.04
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.04
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.04
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.04
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.02
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.02
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.02
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.01
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.01
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.01
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.99
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.98
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.97
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.95
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.95
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.94
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.93
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.92
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.92
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.92
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.91
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.91
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.89
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.88
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.88
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.86
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.86
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.85
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.85
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.85
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.85
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.85
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.85
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.84
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.84
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.83
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.83
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.82
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.8
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.79
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.79
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.79
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.79
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.78
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.78
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.75
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.75
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.74
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.72
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.71
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.71
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.7
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.7
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.7
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.69
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.67
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.66
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.65
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.65
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.65
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.64
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.64
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.63
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.63
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.63
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.63
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.62
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.61
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.59
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.58
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.57
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.57
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.56
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.56
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.56
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.55
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.54
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.54
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.54
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.53
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.51
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.51
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.51
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.51
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.5
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.48
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.48
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.47
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.47
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.47
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.47
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.47
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.46
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.45
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.44
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.42
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.42
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.41
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.41
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.41
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.4
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.4
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.39
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.39
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.39
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	96.38
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.38
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.37
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.36
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.33
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.31
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.31
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.3
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.28
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.28
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.28
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.28
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.27
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.26
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.24
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.23
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.22
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.21
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.21
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.2
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.19
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	96.17
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.17
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.15
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.15
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.14
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	96.14
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	96.13
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.13
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.12
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.12
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	96.1
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.1
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.08
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.08
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.07
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.06
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.06
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.03
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.03
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.03
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.02
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.02
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.01
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.01
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.01
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.97
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.96
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.96
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.95
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.94
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.94
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	95.94
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	95.92
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.91
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.9
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.87
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.86
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	95.86
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.85
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.85
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.84
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	95.84
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.84
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	95.82
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	95.81

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.3e-58  Score=414.57  Aligned_cols=321  Identities=34%  Similarity=0.524  Sum_probs=286.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.|+.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus        22 MkA~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   91 (342)
T 4eye_A           22 MKAIQAQSLSGPEG---------LVYTDVETPG-AGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVR   91 (342)
T ss_dssp             EEEEEECSSSGGGG---------EEEEEEECCC-CCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             eEEEEEecCCCCce---------eEEEeCCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEE
Confidence            89999999998854         5556899999 6999999999999999999999999876666789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|++++ |++||||+++..+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|
T Consensus        92 ~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg  170 (342)
T 4eye_A           92 SAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAG  170 (342)
T ss_dssp             ECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTS
T ss_pred             EECCCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCC
Confidence            9999999 999999999988899999999999999999999999999999999999999998899999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      ++|++++|+++..|++|++++++++++++++++|++.++++. .++   .+.+.+.+++.++|++|||+|.+.+..++++
T Consensus       171 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~---~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~  246 (342)
T 4eye_A          171 GIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGW---AKAVREATGGAGVDMVVDPIGGPAFDDAVRT  246 (342)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTH---HHHHHHHTTTSCEEEEEESCC--CHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhH---HHHHHHHhCCCCceEEEECCchhHHHHHHHh
Confidence            999999999999999999999999999999999999999988 666   6677788888899999999999999999999


Q ss_pred             cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHH
Q 019049          241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA  320 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a  320 (347)
                      ++++|+++.+|...+.....+...++.+++++.++....+....+....+.++++++++.+| +++.++++|+++++++|
T Consensus       247 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A  325 (342)
T 4eye_A          247 LASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQA  325 (342)
T ss_dssp             EEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHH
T ss_pred             hcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHH
Confidence            99999999999776544445556678999999999877766667777778999999999999 99999999999999999


Q ss_pred             HHHHHcCCcceeEEEEe
Q 019049          321 FSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       321 ~~~~~~~~~~gk~vv~~  337 (347)
                      |+.+.+++..||+|+++
T Consensus       326 ~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          326 LQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHTTCCCSEEEEEC
T ss_pred             HHHHHhCCCCceEEEeC
Confidence            99999999999999974

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2.3e-58  Score=414.60  Aligned_cols=323  Identities=27%  Similarity=0.446  Sum_probs=290.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.|+.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus        29 MkA~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~   98 (353)
T 4dup_A           29 MRFVDLKSFGGPDV---------MVIGKRPLPV-AGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIV   98 (353)
T ss_dssp             EEEEEESSSSSGGG---------EEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEE
T ss_pred             eeEEEEccCCCccc---------eEEEeccCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEE
Confidence            89999999998754         5556899999 5999999999999999999999999887666789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|+++++|++||||+++..+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|
T Consensus        99 ~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g  178 (353)
T 4dup_A           99 GVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTS  178 (353)
T ss_dssp             EECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTS
T ss_pred             EECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCC
Confidence            99999999999999999988899999999999999999999999999999999999999998889999999999999989


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      ++|++++|+++..|++|++++++++++++++++|++.++++.+.++   .+.+.+.+ +.++|++|||+|.+.+..++++
T Consensus       179 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~---~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~  254 (353)
T 4dup_A          179 GIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDF---AAVIKAET-GQGVDIILDMIGAAYFERNIAS  254 (353)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHH-SSCEEEEEESCCGGGHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHH---HHHHHHHh-CCCceEEEECCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998887   66666677 7799999999999999999999


Q ss_pred             cccCCEEEEEeecCCCCCC-cchhHhhhcceEEEEEEecccccc-CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHH
Q 019049          241 LNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  318 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~  318 (347)
                      ++++|+++.+|...+.... ++...++.+++++.++....+... .+....+.++++++++.+|++++.++++|++++++
T Consensus       255 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  334 (353)
T 4dup_A          255 LAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA  334 (353)
T ss_dssp             EEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHH
T ss_pred             hccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHH
Confidence            9999999999877654333 566778899999999887654432 22233455888999999999999999999999999


Q ss_pred             HHHHHHHcCCcceeEEEEe
Q 019049          319 LAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       319 ~a~~~~~~~~~~gk~vv~~  337 (347)
                      +||+.+.+++..||+|+++
T Consensus       335 ~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          335 DAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHhCCCCceEEEeC
Confidence            9999999999999999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=5.4e-57  Score=403.19  Aligned_cols=322  Identities=30%  Similarity=0.376  Sum_probs=292.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         9 mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~P~i~G~e~~G~V~   76 (334)
T 3qwb_A            9 QKVILIDEIGGYDV---------IKYEDYPVPS-ISEEELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGREASGTVV   76 (334)
T ss_dssp             EEEEEESSSSSGGG---------EEEEEEECCC-CCTTEEEEEEEEEECCTTHHHHHHTSSC--CCSSEECCSEEEEEEE
T ss_pred             eEEEEEecCCCCce---------eEEEeccCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCC--CCCCCccccceEEEEE
Confidence            89999999998754         4456899999 5999999999999999999999998775  3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeee-CCCeeeCCCCCCHHH---HccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVAD-QSELFPVPKGCDLLA---AAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~-~~~~~~~p~~~~~~~---aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      ++|+++++|++||||+++. +|+|++|++++ ++.++++|+++++++   ||+++..++|||+++...+++++|++|||+
T Consensus        77 ~vG~~v~~~~~GdrV~~~~-~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~  155 (334)
T 3qwb_A           77 AKGKGVTNFEVGDQVAYIS-NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLF  155 (334)
T ss_dssp             EECTTCCSCCTTCEEEEEC-SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EECCCCCCCCCCCEEEEee-CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEE
Confidence            9999999999999999887 69999999999 999999999999999   888899999999999888899999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHH
Q 019049          157 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE  236 (347)
Q Consensus       157 g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  236 (347)
                      |++|++|++++|+++..|++|++++++++|+++++++|+++++++.+.++   .+.+.+.+++.++|++|||+|...+..
T Consensus       156 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~---~~~~~~~~~~~g~D~vid~~g~~~~~~  232 (334)
T 3qwb_A          156 AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDI---LRQVLKFTNGKGVDASFDSVGKDTFEI  232 (334)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHTTTSCEEEEEECCGGGGHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchH---HHHHHHHhCCCCceEEEECCChHHHHH
Confidence            98899999999999999999999999999999999999999999998887   777788888889999999999988999


Q ss_pred             HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhh
Q 019049          237 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  316 (347)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~  316 (347)
                      ++++++++|+++.+|...+....++...++.+++++.++....+.. .+..+.+.++++++++.+|++++.++++|++++
T Consensus       233 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~  311 (334)
T 3qwb_A          233 SLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIA-DPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRD  311 (334)
T ss_dssp             HHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSC-SHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGG
T ss_pred             HHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccC-CHHHHHHHHHHHHHHHHCCCccCceeeEEcHHH
Confidence            9999999999999998776555567777889999999887665533 445566778999999999999999999999999


Q ss_pred             HHHHHHHHHcCCcceeEEEEeCC
Q 019049          317 ANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       317 ~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      +++||+.+.+++..||+|+++++
T Consensus       312 ~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          312 YRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHhCCCceEEEEecCC
Confidence            99999999999999999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=3.3e-57  Score=402.91  Aligned_cols=322  Identities=29%  Similarity=0.348  Sum_probs=289.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|.|+.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         2 MkA~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~   70 (325)
T 3jyn_A            2 AKRIQFSTVGGPEV---------LEYVDFEPEA-PGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVE   70 (325)
T ss_dssp             EEEEEBSSCSSGGG---------CEEEEECCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEE
T ss_pred             cEEEEEecCCCcce---------eEEeecCCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEE
Confidence            99999999998854         4456899999 59999999999999999999999998764 4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      ++|+++++|++||||++.. .+|+|+||++++++.++++|+++++++||+++..++|+|+++...+++++|++|||+|++
T Consensus        71 ~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  150 (325)
T 3jyn_A           71 AVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAA  150 (325)
T ss_dssp             EECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             EECCCCCCCCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999999999999875 479999999999999999999999999999999999999999888999999999999988


Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      |++|++++|+++..|++|++++++++++++++++|+++++|+.+.++   .+.+.+.+++.++|++|||+|.+.+..+++
T Consensus       151 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~  227 (325)
T 3jyn_A          151 GGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDV---AKRVLELTDGKKCPVVYDGVGQDTWLTSLD  227 (325)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTCCEEEEEESSCGGGHHHHHT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccH---HHHHHHHhCCCCceEEEECCChHHHHHHHH
Confidence            99999999999999999999999999999999999999999998887   777888888889999999999988999999


Q ss_pred             ccccCCEEEEEeecCCCCCCcchhHhhhc-ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHH
Q 019049          240 LLNWGAQILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  318 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~  318 (347)
                      +++++|+++.+|...+....++...++.+ .+++.+..+..+. ..+....+.++++++++.+|++++.++++|++++++
T Consensus       228 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  306 (325)
T 3jyn_A          228 SVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYA-NNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAA  306 (325)
T ss_dssp             TEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHS-CSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHH
T ss_pred             HhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeec-CCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHH
Confidence            99999999999987765445566666666 6677665554442 345566778899999999999999999999999999


Q ss_pred             HHHHHHHcCCcceeEEEEe
Q 019049          319 LAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       319 ~a~~~~~~~~~~gk~vv~~  337 (347)
                      +||+.+.+++..||+|+.+
T Consensus       307 ~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          307 KAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999999999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=9.4e-57  Score=405.65  Aligned_cols=312  Identities=29%  Similarity=0.413  Sum_probs=281.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++ ++.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus        28 mkA~~~~~~~-~~~---------l~~~e~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~   96 (363)
T 3uog_A           28 MQEWSTETVA-PHD---------LKLAERPVPE-AGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVE   96 (363)
T ss_dssp             EEEEEBSCTT-TTC---------CEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEE
T ss_pred             hEEEEEccCC-CCC---------cEEEeeeCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEE
Confidence            8999999884 322         4456899999 5999999999999999999999999876556789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHH
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGT  136 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~  136 (347)
                      ++|+++++|++||||++..                        .+|+|+||++++++.++++|+++++++||+++++++|
T Consensus        97 ~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  176 (363)
T 3uog_A           97 AVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT  176 (363)
T ss_dssp             EECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHH
T ss_pred             EECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHH
Confidence            9999999999999999861                        2599999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          137 SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       137 a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ||+++.+.+++++|++|||+| +|++|++++|+|+..|++|++++++++|+++++++|+++++|....++   .+.+.+.
T Consensus       177 a~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~v~~~  252 (363)
T 3uog_A          177 AWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDW---VERVYAL  252 (363)
T ss_dssp             HHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCH---HHHHHHH
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccH---HHHHHHH
Confidence            999998889999999999999 599999999999999999999999999999999999999999555666   6777788


Q ss_pred             hcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHH
Q 019049          217 RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL  296 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      +++.++|++|||+|.+.+..++++++++|+++.+|...+....++...++.+++++.++....         .+.+++++
T Consensus       253 ~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~  323 (363)
T 3uog_A          253 TGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH---------RRALEDLV  323 (363)
T ss_dssp             HTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCC---------HHHHHHHH
T ss_pred             hCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCC---------HHHHHHHH
Confidence            888899999999998889999999999999999998765434456677889999999987654         57889999


Q ss_pred             HHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          297 LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       297 ~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +++.+|++++.++++|+++++++||+.+.+++ .||+|+++
T Consensus       324 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          324 GAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99999999999999999999999999999999 89999985

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.8e-56  Score=401.24  Aligned_cols=325  Identities=25%  Similarity=0.368  Sum_probs=282.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus        23 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~   92 (354)
T 2j8z_A           23 MLAVHFDKPGGPEN---------LYVKEVAKPS-PGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVA   92 (354)
T ss_dssp             EEEEEESSCSSGGG---------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEE
T ss_pred             eeEEEEccCCCccc---------eEEeecCCCC-CCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEE
Confidence            89999999997643         4456899999 5999999999999999999999999776544578999999999999


Q ss_pred             EeCCCC-CCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049           81 AVGPNV-SNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus        81 ~vG~~v-~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      ++|++| ++|++||||+++..+|+|+||++++++.++++|+++++++||+++++++|||+++...+++++|++|||+|++
T Consensus        93 ~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~  172 (354)
T 2j8z_A           93 ELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL  172 (354)
T ss_dssp             EECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTT
T ss_pred             EECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence            999999 9999999999998789999999999999999999999999999999999999999888999999999999998


Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      |++|++++|+++..|++|+++++++++++.++++|++.++|+.+.++   .+.+.+.+.+.++|++|||+|.+.+..+++
T Consensus       173 ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~  249 (354)
T 2j8z_A          173 SGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDF---SEATLKFTKGAGVNLILDCIGGSYWEKNVN  249 (354)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTSCEEEEEESSCGGGHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHH---HHHHHHHhcCCCceEEEECCCchHHHHHHH
Confidence            99999999999999999999999999999999999999999988776   666777777778999999999988899999


Q ss_pred             ccccCCEEEEEeecCCCCCCcch-hHhhhcceEEEEEEeccccc-cCchhHHHHHHHHHHHHHcC---ceeeeeceeeCh
Q 019049          240 LLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKG---LITIHISHTYSP  314 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g---~l~~~~~~~~~~  314 (347)
                      +++++|+++.+|...+....++. ..++.+++++.++....... ..+....+.++++++++.+|   ++++.++++|++
T Consensus       250 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l  329 (354)
T 2j8z_A          250 CLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV  329 (354)
T ss_dssp             HEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG
T ss_pred             hccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH
Confidence            99999999999976554334555 66788999999976543221 11111223445688999999   888889999999


Q ss_pred             hhHHHHHHHHHcCCcceeEEEEeC
Q 019049          315 SEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       315 ~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +++++||+.+.+++..||+|++++
T Consensus       330 ~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          330 TEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999999888899999885

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.1e-56  Score=400.21  Aligned_cols=328  Identities=22%  Similarity=0.316  Sum_probs=283.6

Q ss_pred             CceEEecccCCC-CccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDP-TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |||+++.++|.| ++         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|
T Consensus         5 mka~~~~~~g~p~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V   74 (340)
T 3gms_A            5 GKLIQFHKFGNPKDV---------LQVEYKNIEP-LKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIV   74 (340)
T ss_dssp             EEEEEESSCSCHHHH---------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEE
T ss_pred             cEEEEEecCCCchhe---------EEEEecCCCC-CCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEE
Confidence            799999999986 32         5567899999 599999999999999999999999987766678999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      +++|+++++|++||||+++..+|+|+||++++++.++++|+++++++||+++...+|||+++.+.+++++|++|||+|++
T Consensus        75 ~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~  154 (340)
T 3gms_A           75 ENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACG  154 (340)
T ss_dssp             EEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             EEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCc
Confidence            99999999999999999998889999999999999999999999999999999999999999889999999999999998


Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      |++|++++|+++..|++|+++++++++++.++++|+++++|+.+.++   .+.+.+.+++.++|++|||+|.+....+++
T Consensus       155 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~---~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~  231 (340)
T 3gms_A          155 SAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPL---YETVMELTNGIGADAAIDSIGGPDGNELAF  231 (340)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTSCEEEEEESSCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccH---HHHHHHHhCCCCCcEEEECCCChhHHHHHH
Confidence            89999999999999999999999999999999999999999988877   777888888889999999999987777889


Q ss_pred             ccccCCEEEEEeecCCCCCCcchhHhh-hcceEEEEEEeccccc-cCchhHHHHHHHHHHHHHcCceee-eeceeeChhh
Q 019049          240 LLNWGAQILVIGFASGEIPVIPANIAL-VKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITI-HISHTYSPSE  316 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~  316 (347)
                      +++++|+++.+|...+.  ..+...+. ..++.+..+.+..+.. ..+....+.++++++++.+|++++ .++++|++++
T Consensus       232 ~l~~~G~iv~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~  309 (340)
T 3gms_A          232 SLRPNGHFLTIGLLSGI--QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELAD  309 (340)
T ss_dssp             TEEEEEEEEECCCTTSC--CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGG
T ss_pred             HhcCCCEEEEEeecCCC--CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHH
Confidence            99999999999876543  22333333 3455555554433321 234455688999999999999997 5889999999


Q ss_pred             HHHHHHHHHcCCc-ceeEEEEeCCCCCc
Q 019049          317 ANLAFSAIEDRKV-IGKVMIAFDDMKSI  343 (347)
Q Consensus       317 ~~~a~~~~~~~~~-~gk~vv~~~~~~~~  343 (347)
                      +++||+.+.+++. .||+|+++.+++.-
T Consensus       310 ~~~A~~~~~~~~~~~GKvvl~~~~~~~~  337 (340)
T 3gms_A          310 VKAAVDVVQSAEKTKGKVFLTSYEGHHH  337 (340)
T ss_dssp             HHHHHHHHHCTTCCSSEEEEECC-----
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEeccccc
Confidence            9999999999885 59999999887654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.5e-56  Score=398.76  Aligned_cols=324  Identities=25%  Similarity=0.382  Sum_probs=275.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|.++.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         4 mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~   73 (349)
T 4a27_A            4 MRAVVLAGFGGLNK---------LRLFRKAMPE-PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVE   73 (349)
T ss_dssp             EEEEEECSSSSGGG---------EEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             eEEEEEccCCCcce---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEE
Confidence            89999999998754         4556899999 5999999999999999999999999877666789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|+++++|++||||+++..+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|
T Consensus        74 ~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G  153 (349)
T 4a27_A           74 ALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG  153 (349)
T ss_dssp             EECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTS
T ss_pred             EeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            99999999999999999988899999999999999999999999999999999999999998889999999999999999


Q ss_pred             hHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          161 GVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       161 ~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      ++|++++|+|+.+| ++|++++ ++++++.++ +|++++++ .+.++   .+.+.+.+ ++++|++|||+|++.+..+++
T Consensus       154 ~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~---~~~~~~~~-~~g~Dvv~d~~g~~~~~~~~~  226 (349)
T 4a27_A          154 GVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADY---VQEVKRIS-AEGVDIVLDCLCGDNTGKGLS  226 (349)
T ss_dssp             HHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCH---HHHHHHHC-TTCEEEEEEECC-------CT
T ss_pred             HHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccH---HHHHHHhc-CCCceEEEECCCchhHHHHHH
Confidence            99999999999996 5898888 567788888 99999999 66666   55555555 569999999999988889999


Q ss_pred             ccccCCEEEEEeecCCCC----------------CCcchhHhhhcceEEEEEEeccccccCc--hhHHHHHHHHHHHHHc
Q 019049          240 LLNWGAQILVIGFASGEI----------------PVIPANIALVKNWTVHGLYWGSYKIHRP--HVLEDSLRELLLWAAK  301 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~  301 (347)
                      +++++|+++.+|......                ...+...++.++.++.++....+....+  ....+.++++++++.+
T Consensus       227 ~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  306 (349)
T 4a27_A          227 LLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQ  306 (349)
T ss_dssp             TEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHT
T ss_pred             HhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHC
Confidence            999999999998653210                1134455778899999988755443332  3457899999999999


Q ss_pred             CceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCC
Q 019049          302 GLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK  341 (347)
Q Consensus       302 g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~  341 (347)
                      |++++.++++|+++++++||+.+.+++..||+|++++++.
T Consensus       307 g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~~  346 (349)
T 4a27_A          307 KKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTP  346 (349)
T ss_dssp             TSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCCC
T ss_pred             CCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence            9999999999999999999999999999999999997653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=9.2e-56  Score=395.10  Aligned_cols=323  Identities=26%  Similarity=0.365  Sum_probs=280.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC-CCC-CCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QEK-PPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~-~~~-~~~p~~~G~e~~G~   78 (347)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.+ +.. ..+|.++|||++|+
T Consensus         2 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~   71 (333)
T 1wly_A            2 VMAAVIHKKGGPDN---------FVWEEVKVGS-PGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV   71 (333)
T ss_dssp             CEEEEESSCSSGGG---------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEE
T ss_pred             cEEEEEcccCCcce---------eEEEeccCCC-CCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEE
Confidence            89999999987643         4456899999 599999999999999999999998865 211 35799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecC-CCcceeeEeeeCCCeeeCCCCCCHHH--HccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           79 VDAVGPNVSNFKVGDTVCGFAA-LGSFAQFIVADQSELFPVPKGCDLLA--AAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      |+++|+++++|++||||+.... +|+|+||++++++.++++|+++++++  ||+++++++|||+++...+++++|++|||
T Consensus        72 V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV  151 (333)
T 1wly_A           72 VEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI  151 (333)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             EEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE
Confidence            9999999999999999987654 69999999999999999999999999  99999999999999977889999999999


Q ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049          156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  235 (347)
Q Consensus       156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  235 (347)
                      +|++|++|++++|+++..|++|+++++++++++.++++|++.++|+.+.++   .+.+.+.+.+.++|++|||+|...+.
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~---~~~i~~~~~~~~~d~vi~~~g~~~~~  228 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDF---AEVVREITGGKGVDVVYDSIGKDTLQ  228 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHHTTCCEEEEEECSCTTTHH
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHH---HHHHHHHhCCCCCeEEEECCcHHHHH
Confidence            999999999999999999999999999999999999999999999888776   66677777777899999999998889


Q ss_pred             HHHhccccCCEEEEEeecCCCCCCcchh-Hhhhcc--eEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceee
Q 019049          236 ESLKLLNWGAQILVIGFASGEIPVIPAN-IALVKN--WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY  312 (347)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~  312 (347)
                      .++++++++|+++.+|...+....++.. .++.++  +++.|++.. +. ..+....+.++++++++.+|++++.++++|
T Consensus       229 ~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  306 (333)
T 1wly_A          229 KSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWH-YM-SNRSEIDEGSKCLFDAVKAGVLHSSVAKTF  306 (333)
T ss_dssp             HHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGG-GS-CSHHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             HHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehh-hc-cCHHHHHHHHHHHHHHHHCCCcCCCcceEE
Confidence            9999999999999998766433345555 677888  888887542 21 344445678999999999999999899999


Q ss_pred             ChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          313 SPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       313 ~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      +++++++||+.+.+++..||+|++++
T Consensus       307 ~l~~~~~A~~~~~~~~~~gKvvi~~~  332 (333)
T 1wly_A          307 PLREAAAAHKYMGGRQTIGSIVLLPQ  332 (333)
T ss_dssp             EGGGHHHHHHHHHHCSCCSEEEEETT
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            99999999999999888999999875

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.6e-55  Score=394.94  Aligned_cols=315  Identities=32%  Similarity=0.484  Sum_probs=279.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   70 (343)
T 2eih_A            1 MRAVVMRARGGPEV---------LEVADLPVPE-PGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVD   70 (343)
T ss_dssp             CEEEEECSSSSGGG---------EEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEE
T ss_pred             CeEEEEecCCCCce---------EEEEecCCCC-CCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEE
Confidence            99999999997643         4456899999 5999999999999999999999998765434679999999999999


Q ss_pred             EeCCCCCCCCCCCEEE-------E--------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVC-------G--------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~-------~--------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      ++|+++++|++||||+       +                    +..+|+|+||++++++.++++|+++++++||+++++
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~  150 (343)
T 2eih_A           71 AVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLT  150 (343)
T ss_dssp             EECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHH
T ss_pred             EECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhh
Confidence            9999999999999998       4                    334699999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  213 (347)
                      +.|||+++...+++++|++|||+|++|++|++++|+++..|++|+++++++++++.++++|+++++|+.+.++   .+.+
T Consensus       151 ~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~---~~~~  227 (343)
T 2eih_A          151 FLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDW---PKEV  227 (343)
T ss_dssp             HHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTH---HHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccH---HHHH
Confidence            9999999966679999999999999999999999999999999999999999999999999999999887766   5566


Q ss_pred             HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049          214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  293 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .+.+++.++|++||++|...+..++++++++|+++.+|........++...++.+++++.++....         .+.++
T Consensus       228 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~  298 (343)
T 2eih_A          228 RRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMAS---------KSRLF  298 (343)
T ss_dssp             HHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCC---------GGGHH
T ss_pred             HHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCcc---------HHHHH
Confidence            667766789999999998888999999999999999987665433355667788999999865322         36688


Q ss_pred             HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++.+|++++.++++|+|+++++||+.+.+++..||+|+++
T Consensus       299 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          299 PILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999999999988999999999999999999988889999976

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=5e-55  Score=392.07  Aligned_cols=321  Identities=22%  Similarity=0.270  Sum_probs=275.6

Q ss_pred             CceEEecccC---CCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeE
Q 019049            1 MEALVCRKLG---DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG   77 (347)
Q Consensus         1 m~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G   77 (347)
                      |||++++++|   +++.         +.++++|.|+ |+++||+|||.++++|++|++.+.|.   ...+|.++|||++|
T Consensus         3 MkA~~~~~~G~~~~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G   69 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDGNL---------FKTFNLDIPE-PKVHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIG   69 (346)
T ss_dssp             EEEEEBSSCCCGGGCCC---------CEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEE
T ss_pred             cEEEEEEeccccCCCce---------eEeccccCCC-CCCCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEE
Confidence            8999999998   4433         5557899999 59999999999999999999999876   34679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCC------
Q 019049           78 TVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS------  148 (347)
Q Consensus        78 ~V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~------  148 (347)
                      +|+++|+++++|++||+|++..   .+|+|+||++++++.++++|+++++++||+++++++|||+++...++++      
T Consensus        70 ~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  149 (346)
T 3fbg_A           70 VVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNEN  149 (346)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHH
T ss_pred             EEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccC
Confidence            9999999999999999999864   3699999999999999999999999999999999999999998889998      


Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +|++|||+|++|++|++++|+|+..|++|++++++++++++++++|+++++++.+ ++   .+.+.+. .+.++|++|||
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~---~~~~~~~-~~~g~Dvv~d~  224 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SL---LNQFKTQ-GIELVDYVFCT  224 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CH---HHHHHHH-TCCCEEEEEES
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cH---HHHHHHh-CCCCccEEEEC
Confidence            9999999988899999999999999999999999999999999999999999875 44   4455555 66799999999


Q ss_pred             CCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc---cCchhHHHHHHHHHHHHHcCce
Q 019049          229 VGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI---HRPHVLEDSLRELLLWAAKGLI  304 (347)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~g~l  304 (347)
                      +|.+ .+..++++++++|+++.++...   ...+...+..+++++.++.......   .++....+.++++++++.+|++
T Consensus       225 ~g~~~~~~~~~~~l~~~G~iv~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  301 (346)
T 3fbg_A          225 FNTDMYYDDMIQLVKPRGHIATIVAFE---NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIY  301 (346)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEESSCCS---SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSS
T ss_pred             CCchHHHHHHHHHhccCCEEEEECCCC---CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCE
Confidence            9985 4689999999999999876432   2345556678899998866543221   2344456889999999999999


Q ss_pred             eeeeceee---ChhhHHHHHHHHHcCCcceeEEEEeCCCCC
Q 019049          305 TIHISHTY---SPSEANLAFSAIEDRKVIGKVMIAFDDMKS  342 (347)
Q Consensus       305 ~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~~~~~~  342 (347)
                      ++.++++|   +++++++||+.+.+++..||+|++++++.+
T Consensus       302 ~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~~  342 (346)
T 3fbg_A          302 QPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEGHH  342 (346)
T ss_dssp             CCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-----
T ss_pred             ECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCccc
Confidence            99888887   999999999999999999999999987764

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.7e-55  Score=392.32  Aligned_cols=309  Identities=27%  Similarity=0.420  Sum_probs=274.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|++           +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         3 MkA~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~   70 (340)
T 3s2e_A            3 MKAAVVRAFGAP-----------LTIDEVPVPQ-PGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVS   70 (340)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEECCC-CCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             eEEEEEecCCCC-----------CEEEEccCCC-CCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEE
Confidence            999999998875           4457899999 6999999999999999999999999877656789999999999999


Q ss_pred             EeCCCCCCCCCCCEEE-E---------------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVC-G---------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~-~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|+++++|++||||+ .                           +..+|+|+||++++++.++++|+++++++||++++
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  150 (340)
T 3s2e_A           71 AVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILC  150 (340)
T ss_dssp             EECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGT
T ss_pred             EECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccc
Confidence            9999999999999994 2                           12469999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|++|++++++++|+++++++|+++++|+++.++   .+.
T Consensus       151 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~---~~~  225 (340)
T 3s2e_A          151 AGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDP---AAW  225 (340)
T ss_dssp             HHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCH---HHH
T ss_pred             hhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCH---HHH
Confidence            999999999 6789999999999998 99999999999999999999999999999999999999999998777   555


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      +.+ +.+ ++|++||++|. ..++.++++++++|+++.+|...+.. ..+...++.+++++.++....         .+.
T Consensus       226 ~~~-~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~---------~~~  293 (340)
T 3s2e_A          226 LQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDF-GTPIFDVVLKGITIRGSIVGT---------RSD  293 (340)
T ss_dssp             HHH-HHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEE-EEEHHHHHHTTCEEEECCSCC---------HHH
T ss_pred             HHH-hCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCC-CCCHHHHHhCCeEEEEEecCC---------HHH
Confidence            555 444 89999999986 67789999999999999998766432 345566788999999977554         578


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      ++++++++.+|++++.+ +.++++++++||+.+.+++..||+|+++++
T Consensus       294 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          294 LQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999999999865 578999999999999999999999999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.4e-55  Score=392.48  Aligned_cols=320  Identities=27%  Similarity=0.383  Sum_probs=278.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC-CCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK-PPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~-~~~p~~~G~e~~G~V   79 (347)
                      |||+++.++|.+           +.++++|.|+ |+++||+|||.++++|++|++.+.|..+.. ..+|.++|||++|+|
T Consensus         8 mka~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V   75 (343)
T 3gaz_A            8 MIAAVVEEANGP-----------FVLRKLARPQ-PAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTV   75 (343)
T ss_dssp             EEEEEECSTTCC-----------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEE
T ss_pred             heEEEEecCCCc-----------eEEEeccCCC-CCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEE
Confidence            899999999975           4557899999 699999999999999999999998865332 467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049           80 DAVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  154 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl  154 (347)
                      +++|+++++|++||||++..     .+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++||
T Consensus        76 ~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  155 (343)
T 3gaz_A           76 VAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVL  155 (343)
T ss_dssp             EEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred             EEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEE
Confidence            99999999999999999875     3699999999999999999999999999999999999999998889999999999


Q ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049          155 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  234 (347)
Q Consensus       155 I~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  234 (347)
                      |+|++|++|++++|+|+..|++|+++ .+++++++++++|++. ++ .+.++   .+.+.+.+.+.++|++|||+|++.+
T Consensus       156 V~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~---~~~~~~~~~~~g~D~vid~~g~~~~  229 (343)
T 3gaz_A          156 IQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP-ID-ASREP---EDYAAEHTAGQGFDLVYDTLGGPVL  229 (343)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCH---HHHHHHHHTTSCEEEEEESSCTHHH
T ss_pred             EecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCH---HHHHHHHhcCCCceEEEECCCcHHH
Confidence            99988999999999999999999999 8899999999999998 77 66666   6667778888899999999999889


Q ss_pred             HHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc--cccCchhHHHHHHHHHHHHHcCceeeeec-ee
Q 019049          235 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY--KIHRPHVLEDSLRELLLWAAKGLITIHIS-HT  311 (347)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~g~l~~~~~-~~  311 (347)
                      ..++++++++|+++.+|...    ..+...+..+++++.+++....  ....+....+.++++++++.+|++++.++ ++
T Consensus       230 ~~~~~~l~~~G~iv~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  305 (343)
T 3gaz_A          230 DASFSAVKRFGHVVSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRT  305 (343)
T ss_dssp             HHHHHHEEEEEEEEESCCCS----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCC
T ss_pred             HHHHHHHhcCCeEEEEcccC----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcE
Confidence            99999999999999987654    2345567789999998764321  12334445688999999999999999888 79


Q ss_pred             eChhhHHHHHHHHHcCCc----ceeEEEEeCCCCC
Q 019049          312 YSPSEANLAFSAIEDRKV----IGKVMIAFDDMKS  342 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~----~gk~vv~~~~~~~  342 (347)
                      |+++++++||+.+.+++.    .||+|++++..++
T Consensus       306 ~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~~~  340 (343)
T 3gaz_A          306 FSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGHHH  340 (343)
T ss_dssp             EETTCHHHHHHHHHTCTTCCCCSSBCEEECC----
T ss_pred             ecHHHHHHHHHHHHcCCCcccccceEEEEeccccc
Confidence            999999999999998765    6799999987654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-54  Score=387.12  Aligned_cols=321  Identities=25%  Similarity=0.323  Sum_probs=279.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++ ...+|.++|||++|+|+
T Consensus         2 Mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G~V~   70 (327)
T 1qor_A            2 ATRIEFHKHGGPEV---------LQAVEFTPAD-PAENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVS   70 (327)
T ss_dssp             CEEEEBSSCCSGGG---------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEEEEE
T ss_pred             cEEEEEcCCCChhh---------eEEeccCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCCCceeEEEEE
Confidence            99999999987643         3446899999 5999999999999999999999998764 23579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec--CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019049           81 AVGPNVSNFKVGDTVCGFA--ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  158 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~  158 (347)
                      ++|+++++|++|||| ++.  .+|+|+||++++++.++++|+++++++||+++++++|||+++...+++++|++|||+|+
T Consensus        71 ~vG~~v~~~~~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  149 (327)
T 1qor_A           71 KVGSGVKHIKAGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_dssp             EECTTCCSCCTTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             EECCCCCCCCCCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence            999999999999999 544  45999999999999999999999999999999999999999977899999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHH
Q 019049          159 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  238 (347)
Q Consensus       159 ~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  238 (347)
                      +|++|++++|+++..|++|+++++++++++.++++|++.++|+.+.++   .+.+.+.+.+.++|++|||+|...+..++
T Consensus       150 ~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~D~vi~~~g~~~~~~~~  226 (327)
T 1qor_A          150 AGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDL---VERLKEITGGKKVRVVYDSVGRDTWERSL  226 (327)
T ss_dssp             TBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTCCEEEEEECSCGGGHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccH---HHHHHHHhCCCCceEEEECCchHHHHHHH
Confidence            899999999999999999999999999999999999999999888776   66677777777899999999988889999


Q ss_pred             hccccCCEEEEEeecCCCCCCcchhHhhhc-ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeec--eeeChh
Q 019049          239 KLLNWGAQILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHIS--HTYSPS  315 (347)
Q Consensus       239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~--~~~~~~  315 (347)
                      ++++++|+++.+|...+....++...++.+ ++++.+.....+. ..+....+.++++++++.+|++++.++  ++|+++
T Consensus       227 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~  305 (327)
T 1qor_A          227 DCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKYPLK  305 (327)
T ss_dssp             HTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHC-CSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGG
T ss_pred             HHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhc-CCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHH
Confidence            999999999999876654334555666777 7777765433322 223334678899999999999998888  999999


Q ss_pred             hHHHHHHHHHcCCcceeEEEEe
Q 019049          316 EANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       316 ~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++||+.+.+++..||+|+++
T Consensus       306 ~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          306 DAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             GHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999988899999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-54  Score=388.78  Aligned_cols=319  Identities=27%  Similarity=0.414  Sum_probs=279.4

Q ss_pred             CceEEecccCCCCccccCCCCceeee-ccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |||+++.++|.++.         +.+ ++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|
T Consensus        30 Mka~~~~~~g~~~~---------l~~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V   99 (351)
T 1yb5_A           30 MRAVRVFEFGGPEV---------LKLRSDIAVPI-PKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVI   99 (351)
T ss_dssp             EEEEEESSCSSGGG---------EEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEE
T ss_pred             EEEEEEccCCCcce---------eEEeeecCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEE
Confidence            89999999887643         334 6889999 599999999999999999999999876544567999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecC-CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019049           80 DAVGPNVSNFKVGDTVCGFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  158 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~  158 (347)
                      +++|+++++|++||||++... +|+|+||++++++.++++|+++++++||++++++.|||+++...+++++|++|||+|+
T Consensus       100 ~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  179 (351)
T 1yb5_A          100 EAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA  179 (351)
T ss_dssp             EEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETC
T ss_pred             EEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECC
Confidence            999999999999999998753 6999999999999999999999999999999999999999977899999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHH
Q 019049          159 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  238 (347)
Q Consensus       159 ~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  238 (347)
                      +|++|++++|+++..|++|+++++++++++.++++|++.++|+.+.++   .+.+.+.+++.++|++|||+|.+.+..++
T Consensus       180 sggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~---~~~~~~~~~~~~~D~vi~~~G~~~~~~~~  256 (351)
T 1yb5_A          180 SGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNY---IDKIKKYVGEKGIDIIIEMLANVNLSKDL  256 (351)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTH---HHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchH---HHHHHHHcCCCCcEEEEECCChHHHHHHH
Confidence            999999999999999999999999999999999999999999888776   66677777777899999999988888999


Q ss_pred             hccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHH
Q 019049          239 KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  318 (347)
Q Consensus       239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~  318 (347)
                      ++++++|+++.+|... . ..++...++.+++++.++.+..   ..+..+.+.++.+.+++.+|++++.++++|++++++
T Consensus       257 ~~l~~~G~iv~~g~~~-~-~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~  331 (351)
T 1yb5_A          257 SLLSHGGRVIVVGSRG-T-IEINPRDTMAKESSIIGVTLFS---STKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVA  331 (351)
T ss_dssp             HHEEEEEEEEECCCCS-C-EEECTHHHHTTTCEEEECCGGG---CCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHH
T ss_pred             HhccCCCEEEEEecCC-C-CccCHHHHHhCCcEEEEEEeec---CCHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHH
Confidence            9999999999998542 1 2244456788999999875432   234455677788888999999999899999999999


Q ss_pred             HHHHH-HHcCCcceeEEEEe
Q 019049          319 LAFSA-IEDRKVIGKVMIAF  337 (347)
Q Consensus       319 ~a~~~-~~~~~~~gk~vv~~  337 (347)
                      +||+. +.++...||+|+++
T Consensus       332 ~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          332 EAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHhCCCCeEEEEeC
Confidence            99998 56667789999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=5.6e-56  Score=398.83  Aligned_cols=321  Identities=20%  Similarity=0.225  Sum_probs=277.3

Q ss_pred             CceEEec--ccC-CCCccccCCCCceeeeccc---------cCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCC
Q 019049            1 MEALVCR--KLG-DPTVSIHDEKSPIVLSKTE---------PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLP   68 (347)
Q Consensus         1 m~a~~~~--~~~-~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p   68 (347)
                      |||++++  +++ .++.         +.+++.         |.|+ |++|||+|||.++++|++|++.+.|.++....+|
T Consensus        11 mka~~~~~~~~~~~~~~---------l~~~~~~~~~~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A           11 MKALLLVGDGYTKTPSG---------SALEAMEPYLEQGRIAVPA-PGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             EEEEEECSCBSCSSCCC---------SCCCCSTTTEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             heEEEEEccccCCCccc---------ceEEEeecccccccCCCCC-CCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            8999999  553 3432         333456         9999 5999999999999999999999999876666789


Q ss_pred             cccCCceeEEEEEeCCCC-CCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh
Q 019049           69 FVPGSDYSGTVDAVGPNV-SNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR  144 (347)
Q Consensus        69 ~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~  144 (347)
                      .++|||++|+|+++|++| ++|++||||++..   .+|+|+||++++++.++++|+++++++||++++..+|||+++ +.
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~  159 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DI  159 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HH
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HH
Confidence            999999999999999999 9999999999875   579999999999999999999999999999999999999665 55


Q ss_pred             cCCCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          145 AQLSSG-QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       145 ~~~~~~-~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      ++ +++ ++|+|+|++|++|++++|+|+..|++|++++++++|+++++++|+++++|+++.++   .+.+.+.+++.++|
T Consensus       160 ~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          160 VK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDF---EATLREVMKAEQPR  235 (349)
T ss_dssp             HH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTH---HHHHHHHHHHHCCC
T ss_pred             Hh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHH---HHHHHHHhcCCCCc
Confidence            66 566 79999999999999999999999999999999999999999999999999988887   66677777777899


Q ss_pred             EEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcch-hHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcC
Q 019049          224 VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG  302 (347)
Q Consensus       224 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  302 (347)
                      ++|||+|.+.+..++++++++|+++.+|........++. ..++.+++++.+++...+....+....+.++++++++.+|
T Consensus       236 ~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g  315 (349)
T 3pi7_A          236 IFLDAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDG  315 (349)
T ss_dssp             EEEESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTS
T ss_pred             EEEECCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcC
Confidence            999999998888999999999999999976654444555 6788999999999887766666666678899999999999


Q ss_pred             ceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          303 LITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       303 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++.++++|+++++++||+. .++...||+|+++
T Consensus       316 ~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          316 RWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             SCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             CcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            999999999999999999995 4555779999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=3.4e-54  Score=387.60  Aligned_cols=312  Identities=21%  Similarity=0.277  Sum_probs=273.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+.+...          .-++|.|.|+ |+||||||||.++|||++|++.+.|.++.  .+|.++|||++|+|+
T Consensus         1 MKA~v~~~~~~~~----------~~l~e~~~P~-~~p~eVLVkv~a~gic~~D~~~~~G~~~~--~~p~i~GhE~aG~V~   67 (348)
T 4eez_A            1 MKAAVVRHNPDGY----------ADLVEKELRA-IKPNEALLDMEYCGVCHTDLHVAAGDFGN--KAGTVLGHEGIGIVK   67 (348)
T ss_dssp             CEEEEECSSCCSS----------EEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHTTTTCC--CTTCBCCSEEEEEEE
T ss_pred             CeEEEEEcCCCCc----------EEEEEeECCC-CCCCEEEEEEEEEEECHHHHHHhcCCCCC--CCCcccceeEEEEEE
Confidence            9999997644321          3446899999 59999999999999999999999998753  579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++|++|++||||+..                            ..+|+|+||++++++.++++|+++++++||++++
T Consensus        68 ~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~  147 (348)
T 4eez_A           68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITC  147 (348)
T ss_dssp             EECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHH
T ss_pred             EECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhccc
Confidence            999999999999999642                            2348999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  211 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  211 (347)
                      ++.|||+++ +.+++++|++|||+|+ |++|.+++|+++.. |++|++++++++|+++++++|+++++|+++.++   .+
T Consensus       148 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~---~~  222 (348)
T 4eez_A          148 AGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNP---VD  222 (348)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCH---HH
T ss_pred             ceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCH---HH
Confidence            999999998 6788999999999999 99999999999876 679999999999999999999999999999888   77


Q ss_pred             HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      ++.+.+++.++|.+++++++ ..+..++++++++|+++.+|...... ..+...++.+++++.|+..++         ++
T Consensus       223 ~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~gs~~~~---------~~  292 (348)
T 4eez_A          223 EIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEM-TLSVPTVVFDGVEVAGSLVGT---------RL  292 (348)
T ss_dssp             HHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEE-EECHHHHHHSCCEEEECCSCC---------HH
T ss_pred             HhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCC-ccCHHHHHhCCeEEEEEecCC---------HH
Confidence            88889999999999999887 56789999999999999998765433 356667889999999987655         46


Q ss_pred             HHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCC
Q 019049          291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK  341 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~  341 (347)
                      .++++++++.+|++++.+ ++|+|+++++||+.+.+++..||+||+|+.=+
T Consensus       293 ~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~skL~  342 (348)
T 4eez_A          293 DLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTKLE  342 (348)
T ss_dssp             HHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC---
T ss_pred             HHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccccc
Confidence            789999999999999755 78999999999999999999999999997543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.5e-54  Score=389.19  Aligned_cols=308  Identities=23%  Similarity=0.385  Sum_probs=274.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-CCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V   79 (347)
                      |||++++++|++           +.++++|.|+ |++|||+|||.++++|++|++.+.|.++. ...+|.++|||++|+|
T Consensus         1 MkA~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V   68 (345)
T 3jv7_A            1 MKAVQYTEIGSE-----------PVVVDIPTPT-PGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTV   68 (345)
T ss_dssp             CEEEEECSTTSC-----------CEEEECCCCC-CCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEE
T ss_pred             CeEEEEcCCCCc-----------eEEEEecCCC-CCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEE
Confidence            999999999975           3447899999 59999999999999999999999987652 3467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec--------------------------------CCCcceeeEeee-CCCeeeCCCCCCHHH
Q 019049           80 DAVGPNVSNFKVGDTVCGFA--------------------------------ALGSFAQFIVAD-QSELFPVPKGCDLLA  126 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~--------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~  126 (347)
                      +++|+++++|++||||+++.                                .+|+|+||++++ ++.++++|+ +++++
T Consensus        69 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~  147 (345)
T 3jv7_A           69 AELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVA  147 (345)
T ss_dssp             EEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHH
T ss_pred             EEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHH
Confidence            99999999999999998742                                369999999999 899999999 99999


Q ss_pred             HccCcchHHHHHHHHHH-hcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCC
Q 019049          127 AAALPVAFGTSHVALVH-RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNE  204 (347)
Q Consensus       127 aa~l~~~~~~a~~~l~~-~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~  204 (347)
                      ||+++++++|||+++.. ..++++|++|+|+|+ |++|++++|+|+.+ |++|++++++++|+++++++|+++++++++ 
T Consensus       148 aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-  225 (345)
T 3jv7_A          148 AAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-  225 (345)
T ss_dssp             HGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-
T ss_pred             hhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-
Confidence            99999999999999976 458999999999998 99999999999999 679999999999999999999999999876 


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      ++   .+.+.+.+++.++|++|||+|.+ .+..++++++++|+++.+|...+....++. .++.+++++.++....    
T Consensus       226 ~~---~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~----  297 (345)
T 3jv7_A          226 GA---ADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGT----  297 (345)
T ss_dssp             TH---HHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCC----
T ss_pred             cH---HHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCC----
Confidence            55   67788888888999999999996 789999999999999999977653233443 6778999999877554    


Q ss_pred             CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                           .+.++++++++.+|++++ +.++|+++++++||+.+.+++..||+|+++
T Consensus       298 -----~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          298 -----RSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             -----HHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             -----HHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence                 478899999999999998 458999999999999999999999999864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.4e-54  Score=388.34  Aligned_cols=307  Identities=25%  Similarity=0.371  Sum_probs=269.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (347)
                      |||+++.++|.+           +.++++|.|++|+++||+|||.++++|++|++.+.|.++  ....+|.++|||++|+
T Consensus        16 mka~~~~~~g~~-----------l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   84 (359)
T 1h2b_A           16 LKAARLHEYNKP-----------LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGY   84 (359)
T ss_dssp             -CEEEESSTTSC-----------CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEE
T ss_pred             ceEEEEecCCCC-----------cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEE
Confidence            899999998854           334689999823999999999999999999999998653  1235799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHc---
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAA---  128 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa---  128 (347)
                      |+++|++|++|++||||+++.                           .+|+|+||++++++.++++|+++++++||   
T Consensus        85 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~  164 (359)
T 1h2b_A           85 IEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMA  164 (359)
T ss_dssp             EEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTG
T ss_pred             EEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhcc
Confidence            999999999999999998753                           35999999999999999999999999999   


Q ss_pred             cCcchHHHHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          129 ALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~-~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      .+++++.|||+++... +++++|++|||+|+ |++|++++|+|+.+ |++|++++++++|+++++++|+++++|+++. +
T Consensus       165 ~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~  242 (359)
T 1h2b_A          165 PLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-P  242 (359)
T ss_dssp             GGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-H
T ss_pred             chhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-H
Confidence            7888999999999665 89999999999999 99999999999999 9999999999999999999999999998876 5


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCcc---chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGGK---LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                         .+.+.+.+++.++|++|||+|.+   .+..++++  ++|+++.+|.....  .++...++.+++++.++....    
T Consensus       243 ---~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~~~~~~~~~~~~~i~g~~~~~----  311 (359)
T 1h2b_A          243 ---VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--RFPTIRVISSEVSFEGSLVGN----  311 (359)
T ss_dssp             ---HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--CCCHHHHHHTTCEEEECCSCC----
T ss_pred             ---HHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--CCCHHHHHhCCcEEEEecCCC----
Confidence               55666777777899999999986   77888888  99999999876543  456667788999999876433    


Q ss_pred             CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                           .+.++++++++.+|++++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus       312 -----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          312 -----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             -----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence                 47789999999999999888 9999999999999999998889999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=8e-54  Score=386.14  Aligned_cols=321  Identities=26%  Similarity=0.293  Sum_probs=274.8

Q ss_pred             CceEEeccc---CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeE
Q 019049            1 MEALVCRKL---GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG   77 (347)
Q Consensus         1 m~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G   77 (347)
                      |||++++++   ++++.         +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|
T Consensus        23 MkA~~~~~~~~~~~~~~---------l~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G   91 (363)
T 4dvj_A           23 MKAVGYNKPAPITDDAS---------LLDIELPKPA-PAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAG   91 (363)
T ss_dssp             EEEEEBSSCCCTTSTTS---------SEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEE
T ss_pred             eEEEEEeccCCCCCCce---------EEEeecCCCC-CCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEE
Confidence            899999988   44433         4456899999 59999999999999999999999998653 4679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCC-----C
Q 019049           78 TVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----S  149 (347)
Q Consensus        78 ~V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~-----~  149 (347)
                      +|+++|+++++|++||||++..   .+|+|+||++++++.++++|+++++++||+++.+++|||+++...++++     +
T Consensus        92 ~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~  171 (363)
T 4dvj_A           92 IVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGA  171 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTS
T ss_pred             EEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCC
Confidence            9999999999999999999863   4699999999999999999999999999999999999999998888998     8


Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      |++|||+||+|++|++++|+|+.+ |++|++++++++|+++++++|+++++++.+ ++   .+.+.+. .++++|++|||
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~---~~~v~~~-~~~g~Dvvid~  246 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PL---AAEVAAL-GLGAPAFVFST  246 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CH---HHHHHTT-CSCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CH---HHHHHHh-cCCCceEEEEC
Confidence            999999998899999999999984 889999999999999999999999999875 44   4444444 66799999999


Q ss_pred             CCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccc---ccCchhHHHHHHHHHHHHHcCce
Q 019049          229 VGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK---IHRPHVLEDSLRELLLWAAKGLI  304 (347)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~l  304 (347)
                      +|++ .+..++++++++|+++.++..    ..++...+..+++++.++......   ..+.....+.++++++++.+|++
T Consensus       247 ~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  322 (363)
T 4dvj_A          247 THTDKHAAEIADLIAPQGRFCLIDDP----SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRL  322 (363)
T ss_dssp             SCHHHHHHHHHHHSCTTCEEEECSCC----SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSS
T ss_pred             CCchhhHHHHHHHhcCCCEEEEECCC----CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCe
Confidence            9985 779999999999999998543    235556677889999886644321   12223346789999999999999


Q ss_pred             eeeeceee---ChhhHHHHHHHHHcCCcceeEEEEeCCCC
Q 019049          305 TIHISHTY---SPSEANLAFSAIEDRKVIGKVMIAFDDMK  341 (347)
Q Consensus       305 ~~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~~~~~  341 (347)
                      ++.+.+++   +++++++||+.+.+++..||+|+++.+-+
T Consensus       323 ~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~~~  362 (363)
T 4dvj_A          323 RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFGLQ  362 (363)
T ss_dssp             CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSCC-
T ss_pred             eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcccC
Confidence            98877766   99999999999999999999999997643

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.7e-53  Score=382.80  Aligned_cols=313  Identities=22%  Similarity=0.301  Sum_probs=269.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|..            .++|.|.|++|+||||||||.++|+|++|++.+.|..+  ..+|+++|||++|+|+
T Consensus         1 MkAvv~~~~g~l------------~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~--~~~P~i~G~E~~G~V~   66 (346)
T 4a2c_A            1 MKSVVNDTDGIV------------RVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA--HYYPITLGHEFSGYID   66 (346)
T ss_dssp             CEEEEECSSSCE------------EEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS--SSSSBCCCCEEEEEEE
T ss_pred             CCEEEEecCCCE------------EEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC--CCCCccccEEEEEEEE
Confidence            999999999863            44789999977899999999999999999999988754  4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe---------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      ++|++|+++++||+|+..                           ..+|+|+||++++++.++++|+++|+++||+++ +
T Consensus        67 ~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~  145 (346)
T 4a2c_A           67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-P  145 (346)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-H
T ss_pred             EECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-H
Confidence            999999999999999753                           235999999999999999999999999999774 4


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      +++++++ ....++++|++|||+|+ |++|++++|+|+.+|++ +++++++++|+++++++|+++++|+++.+.   .+.
T Consensus       146 ~~~~~~~-~~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~---~~~  220 (346)
T 4a2c_A          146 ITVGLHA-FHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSA---PQM  220 (346)
T ss_dssp             HHHHHHH-HHHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCH---HHH
T ss_pred             HHHHHHH-HHHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCH---HHH
Confidence            5555554 47899999999999998 99999999999999995 678888999999999999999999998887   556


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC--CCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  289 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +...+++.++|+++||+|. ..++.++++++++|+++.+|....+.  ...+...++.+++++.|++.......    ..
T Consensus       221 ~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~----~~  296 (346)
T 4a2c_A          221 QSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPW----PG  296 (346)
T ss_dssp             HHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSST----TC
T ss_pred             HHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcc----hH
Confidence            6677888899999999997 56789999999999999999776543  23455667899999999765432211    13


Q ss_pred             HHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          290 DSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       290 ~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +.++++++++.+|++++  .++++|+|+++++||+.+.+++..||+||.+
T Consensus       297 ~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          297 QEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            67889999999999874  4889999999999999999999999999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=4.1e-55  Score=389.69  Aligned_cols=315  Identities=23%  Similarity=0.274  Sum_probs=273.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|+|+.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 MkA~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   70 (324)
T 3nx4_A            1 MQALILEQQDGKTL---------ASVQHLEESQ-LPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVH   70 (324)
T ss_dssp             CEEEEEEESSSSEE---------EEEEECCGGG-SCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEE
T ss_pred             CceEEEecCCCCce---------eeEeecCCCC-CCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEE
Confidence            99999999998754         5567899999 5999999999999999999999999877656789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHH--hcCCCCCC-
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH--RAQLSSGQ-  151 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~~~-  151 (347)
                      ++|  +++|++||||++..      .+|+|+||++++++.++++|+++++++||+++..++|||+++..  ..++++++ 
T Consensus        71 ~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g  148 (324)
T 3nx4_A           71 ASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDG  148 (324)
T ss_dssp             EES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             EeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCC
Confidence            998  67899999999763      57999999999999999999999999999999999999998863  35566633 


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||+|++|++|++++|+|+.+|++|++++++++|+++++++|+++++|+++.+.      + +...+.++|++|||+|+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~------~-~~~~~~~~d~v~d~~g~  221 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE------S-RPLEKQLWAGAIDTVGD  221 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC------C-CSSCCCCEEEEEESSCH
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH------H-HhhcCCCccEEEECCCc
Confidence            4999999999999999999999999999999999999999999999999876443      1 11234589999999999


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      +.+..++++++++|+++.+|.........+...++.+++++.+++....   .+....+.++++++++.+|++++. +++
T Consensus       222 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~-~~~  297 (324)
T 3nx4_A          222 KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMT---PPARRAEAWARLVKDLPESFYAQA-ATE  297 (324)
T ss_dssp             HHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTC---CHHHHHHHHHHHHHHSCHHHHHHH-EEE
T ss_pred             HHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEecccc---ChHHHHHHHHHHHHHHHcCCCCCC-cee
Confidence            9889999999999999999877654334455667889999999764332   334445788999999999999977 999


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      |+++++++||+.+.+++..||+|++++
T Consensus       298 ~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          298 ITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             EEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999999999999999999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.8e-53  Score=380.85  Aligned_cols=309  Identities=27%  Similarity=0.389  Sum_probs=271.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|.+           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~   68 (339)
T 1rjw_A            1 MKAAVVEQFKEP-----------LKIKEVEKPT-ISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVE   68 (339)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEE
T ss_pred             CeEEEEcCCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEE
Confidence            999999998854           3346899999 5999999999999999999999998765445679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++|++|++||||+..                            ..+|+|+||++++++.++++|+++++++||++++
T Consensus        69 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  148 (339)
T 1rjw_A           69 EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFC  148 (339)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGT
T ss_pred             EECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhh
Confidence            999999999999999752                            1358999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.|||+++.. .++++|++|||+|+ |++|++++|+++..|++|+++++++++++.++++|+++++|+.+.++   .+.
T Consensus       149 ~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~---~~~  223 (339)
T 1rjw_A          149 AGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDA---AKF  223 (339)
T ss_dssp             HHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCH---HHH
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccH---HHH
Confidence            99999999954 58999999999999 88999999999999999999999999999999999999999887766   455


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      +.+.+  .++|++||++|. ..+..++++++++|+++.+|...+. ..++...++.+++++.++....         .+.
T Consensus       224 ~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~~  291 (339)
T 1rjw_A          224 MKEKV--GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIGSIVGT---------RKD  291 (339)
T ss_dssp             HHHHH--SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEECCSCC---------HHH
T ss_pred             HHHHh--CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC-CccCHHHHHhCCcEEEEeccCC---------HHH
Confidence            55555  489999999997 6788999999999999999876543 2345556778999999876443         467


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      ++++++++.+|++++. .++|+++++++||+.+.+++..||+|+++++
T Consensus       292 ~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          292 LQEALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            8999999999999976 4789999999999999998888999999853

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1e-54  Score=391.69  Aligned_cols=324  Identities=27%  Similarity=0.341  Sum_probs=272.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.|.        +.+.+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus        27 mka~~~~~~g~~~--------~~l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~   97 (357)
T 1zsy_A           27 VRALVYGHHGDPA--------KVVELKNLELAA-VRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVV   97 (357)
T ss_dssp             EEEEEESSSSCHH--------HHEEEEEECCCC-CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEE
T ss_pred             hEEEEEecCCCcc--------ceEEEeeccCCC-CCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEE
Confidence            8999999998751        113456889999 5999999999999999999999999776544679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      ++|+++++|++||||++.. .+|+|+||++++++.++++|+++++++||++++.++|||+++...+++++|++|||+|++
T Consensus        98 ~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  177 (357)
T 1zsy_A           98 AVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASN  177 (357)
T ss_dssp             EECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTT
T ss_pred             EeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCc
Confidence            9999999999999999875 369999999999999999999999999999999999999999888899999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCC-cccEEEeCCCccch
Q 019049          160 GGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLK-GVDVLYDPVGGKLT  234 (347)
Q Consensus       160 g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~~  234 (347)
                      |++|++++|+|+.+|+++++++.+.    +++++++++|+++++++.+..    .+.+.+.+.+. ++|++|||+|++..
T Consensus       178 G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~----~~~~~~~~~~~~~~Dvvid~~g~~~~  253 (357)
T 1zsy_A          178 SGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR----RPEMKNFFKDMPQPRLALNCVGGKSS  253 (357)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH----SGGGGGTTSSSCCCSEEEESSCHHHH
T ss_pred             CHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch----HHHHHHHHhCCCCceEEEECCCcHHH
Confidence            9999999999999999988887653    256788999999999864311    01223334332 59999999998777


Q ss_pred             HHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc-cCchhHHHHHHHHHHHHHcCceeeeeceeeC
Q 019049          235 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITIHISHTYS  313 (347)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~  313 (347)
                      ..++++++++|+++.+|........++...++.+++++.+++...+.. ..+....+.++++++++.+|++++.+.++|+
T Consensus       254 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  333 (357)
T 1zsy_A          254 TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVP  333 (357)
T ss_dssp             HHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEE
T ss_pred             HHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEc
Confidence            789999999999999986543333455566778999999987654432 2344456788999999999999988879999


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEEe
Q 019049          314 PSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       314 ~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ++++++||+.+.+++..||+|+++
T Consensus       334 l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          334 LQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             GGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999999999999988889999974

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.5e-54  Score=392.10  Aligned_cols=325  Identities=22%  Similarity=0.302  Sum_probs=275.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCC--CCeEEEEEEEecCChhhHHHHhccCCCCCCCC---------c
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS--STAVRVRVKATSLNYANYLQILGKYQEKPPLP---------F   69 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p---------~   69 (347)
                      |||+++.++|.|.        +.+.+++.|.|+ |+  ++||+|||.++++|++|++.+.|.++....+|         .
T Consensus         4 mka~~~~~~g~~~--------~~l~~~~~~~P~-p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~   74 (364)
T 1gu7_A            4 AQAVLYTQHGEPK--------DVLFTQSFEIDD-DNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAA   74 (364)
T ss_dssp             EEEEEESSCSCHH--------HHCEEEEEEECT-TSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBE
T ss_pred             EEEEEeccCCCch--------heeEEeeccCCC-CCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCccc
Confidence            8999999998641        113345777777 46  99999999999999999999998765434566         8


Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCC-----------CCCHHHHccCcchHHHH
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPK-----------GCDLLAAAALPVAFGTS  137 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~-----------~~~~~~aa~l~~~~~~a  137 (347)
                      ++|||++|+|+++|+++++|++||||++.. .+|+|+||++++++.++++|+           ++++++||+++++++||
T Consensus        75 i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta  154 (364)
T 1gu7_A           75 PCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTA  154 (364)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHH
T ss_pred             ccCceeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHH
Confidence            999999999999999999999999999874 369999999999999999998           89999999999999999


Q ss_pred             HHHHHHhcCCCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh----HHHHHhcCCcEEEeCCC---CCchhh
Q 019049          138 HVALVHRAQLSSG-QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVDHVVDLSN---ESVIPS  209 (347)
Q Consensus       138 ~~~l~~~~~~~~~-~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~----~~~~~~~g~~~v~~~~~---~~~~~~  209 (347)
                      |+++...+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    +++++++|+++++++++   .++   
T Consensus       155 ~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~---  231 (364)
T 1gu7_A          155 YLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREF---  231 (364)
T ss_dssp             HHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGG---
T ss_pred             HHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHH---
Confidence            9999777899999 999999999999999999999999999999876654    67788999999998764   455   


Q ss_pred             HHHHHHHh--cCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchh
Q 019049          210 VKEFLKAR--KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV  287 (347)
Q Consensus       210 ~~~~~~~~--~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (347)
                      .+.+.+.+  ++.++|++|||+|++....++++++++|+++.+|........++...++.+++++.+++...+...++..
T Consensus       232 ~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  311 (364)
T 1gu7_A          232 GPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKEL  311 (364)
T ss_dssp             HHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHH
T ss_pred             HHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHH
Confidence            55666666  5679999999999877778899999999999998765433334555677899999998766555455555


Q ss_pred             HHHHHHHHHHHHHcCceeeeeceeeCh---hhHHHHHHHHHcCCcceeEEEEe
Q 019049          288 LEDSLRELLLWAAKGLITIHISHTYSP---SEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       288 ~~~~~~~~~~~l~~g~l~~~~~~~~~~---~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      ..+.++++++++.+|++++.+..++++   +++++||+.+.+++..||+|+++
T Consensus       312 ~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          312 KTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            567899999999999999876667766   49999999999998899999975

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=4e-54  Score=382.42  Aligned_cols=306  Identities=29%  Similarity=0.402  Sum_probs=265.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC--C--CCCCCCcccCCcee
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--Q--EKPPLPFVPGSDYS   76 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~--~--~~~~~p~~~G~e~~   76 (347)
                      |||+++.++|.++.         +.+++.|.|+ |++|||+|||.++++|++|++.+.|..  +  ....+|.++|||++
T Consensus         7 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~   76 (321)
T 3tqh_A            7 MKAIQFDQFGPPKV---------LKLVDTPTPE-YRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFS   76 (321)
T ss_dssp             EEEEEESSSCSGGG---------EEEEEEECCC-CCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEE
T ss_pred             ceEEEEccCCCcce---------eEEEecCCCC-CCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeE
Confidence            89999999998754         4556899999 599999999999999999999998821  1  13467999999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEec----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCE
Q 019049           77 GTVDAVGPNVSNFKVGDTVCGFA----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV  152 (347)
Q Consensus        77 G~V~~vG~~v~~~~~Gd~V~~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~  152 (347)
                      |+|+++|+++++|++||||+++.    .+|+|+||++++++.++++|+++++++||+++++++|||+++ +.+++++|++
T Consensus        77 G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~  155 (321)
T 3tqh_A           77 GEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDV  155 (321)
T ss_dssp             EEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCE
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCE
Confidence            99999999999999999999884    369999999999999999999999999999999999999999 8899999999


Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      |||+|++|++|++++|+|+..|++|+++++ ++++++++++|+++++|+++.+ +   .+.      -.++|++|||+|+
T Consensus       156 vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~~~~~~~lGa~~~i~~~~~~~~---~~~------~~g~D~v~d~~g~  225 (321)
T 3tqh_A          156 VLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHAFLKALGAEQCINYHEEDFL---LAI------STPVDAVIDLVGG  225 (321)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHHHHHHHHHTCSEEEETTTSCHH---HHC------CSCEEEEEESSCH
T ss_pred             EEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cchHHHHHHcCCCEEEeCCCcchh---hhh------ccCCCEEEECCCc
Confidence            999998899999999999999999999984 6678999999999999998876 4   111      1589999999999


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      +.+..++++++++|+++.+|.....   .....+..+++++.++....    .    .+.++++++++.+|++++.++++
T Consensus       226 ~~~~~~~~~l~~~G~iv~~g~~~~~---~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~l~~~g~l~~~i~~~  294 (321)
T 3tqh_A          226 DVGIQSIDCLKETGCIVSVPTITAG---RVIEVAKQKHRRAFGLLKQF----N----IEELHYLGKLVSEDKLRIEISRI  294 (321)
T ss_dssp             HHHHHHGGGEEEEEEEEECCSTTHH---HHHHHHHHTTCEEECCCCCC----C----HHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             HHHHHHHHhccCCCEEEEeCCCCch---hhhhhhhhcceEEEEEecCC----C----HHHHHHHHHHHHCCCcccccccE
Confidence            8889999999999999998744321   11224567788887743211    1    47789999999999999999999


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      |+++++++||+.+.+++..||+|++++
T Consensus       295 ~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          295 FQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             ECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            999999999999999999999999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.5e-53  Score=387.02  Aligned_cols=313  Identities=20%  Similarity=0.313  Sum_probs=271.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++++++           +.++++|.|+ |+++||+|||.+++||++|++.+.|..+ ...+|.++|||++|+|+
T Consensus         9 mkA~v~~~~~~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~   75 (378)
T 3uko_A            9 CKAAVAYEPNKP-----------LVIEDVQVAP-PQAGEVRIKILYTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVE   75 (378)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             eEEEEEecCCCc-----------cEEEEecCCC-CCCCeEEEEEEEeecCHHHHHHhcCCCC-CCCCCccCCccceEEEE
Confidence            899999999875           4457899999 6999999999999999999999998764 34679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC-------------------------------------------------CCcceeeEeee
Q 019049           81 AVGPNVSNFKVGDTVCGFAA-------------------------------------------------LGSFAQFIVAD  111 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~  111 (347)
                      ++|++|++|++||||++...                                                 .|+|+||++++
T Consensus        76 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  155 (378)
T 3uko_A           76 SVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVH  155 (378)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             EeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEec
Confidence            99999999999999986432                                                 15999999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      ++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++++
T Consensus       156 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a  234 (378)
T 3uko_A          156 DVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA  234 (378)
T ss_dssp             GGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH
T ss_pred             hhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            99999999999999999999999999999988899999999999998 9999999999999999 899999999999999


Q ss_pred             HhcCCcEEEeCC--CCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCC-CcchhHh
Q 019049          191 KSLGVDHVVDLS--NESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIP-VIPANIA  265 (347)
Q Consensus       191 ~~~g~~~v~~~~--~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~  265 (347)
                      +++|+++++++.  +.++   .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|....... ..+...+
T Consensus       235 ~~lGa~~vi~~~~~~~~~---~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~  310 (378)
T 3uko_A          235 KKFGVNEFVNPKDHDKPI---QEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL  310 (378)
T ss_dssp             HTTTCCEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHH
T ss_pred             HHcCCcEEEccccCchhH---HHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHH
Confidence            999999999987  4555   6667777777 99999999998 5779999999996 99999997653222 2222333


Q ss_pred             hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      + +++++.++.++.+.      ..+.++++++++.+|++++  .++++|+|+++++||+.+.+++.. |+|+++++
T Consensus       311 ~-~~~~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          311 V-TGRVWKGTAFGGFK------SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             H-TTCEEEECSGGGCC------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             h-cCcEEEEEEecCCC------chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            3 48888887655332      1467899999999999985  488999999999999999988876 99999863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.3e-53  Score=378.30  Aligned_cols=311  Identities=24%  Similarity=0.352  Sum_probs=270.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.+           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         6 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   73 (347)
T 2hcy_A            6 QKGVIFYESHGK-----------LEYKDIPVPK-PKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVV   73 (347)
T ss_dssp             EEEEEESSTTCC-----------CEEEEEECCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEE
T ss_pred             cEEEEEeCCCCC-----------CEEEEeeCCC-CCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEE
Confidence            899999998854           3346899999 5999999999999999999999998765445679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++|++|++||||+..                            ..+|+|+||++++++.++++|+++++++||++++
T Consensus        74 ~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  153 (347)
T 2hcy_A           74 GMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILC  153 (347)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGT
T ss_pred             EECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhh
Confidence            999999999999999752                            1258999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC-CCCchhhHH
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS-NESVIPSVK  211 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~  211 (347)
                      ++.|||+++. ..++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++++|++.++|+. ..++   .+
T Consensus       154 ~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~---~~  229 (347)
T 2hcy_A          154 AGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDI---VG  229 (347)
T ss_dssp             HHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCH---HH
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhH---HH
Confidence            9999999995 45899999999999999999999999999999999999999999999999999999977 4455   44


Q ss_pred             HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      .+.+.+.+ ++|++||++|. ..+..++++++++|+++.+|...+....++...++.+++++.++....         .+
T Consensus       230 ~~~~~~~~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~  299 (347)
T 2hcy_A          230 AVLKATDG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---------RA  299 (347)
T ss_dssp             HHHHHHTS-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCC---------HH
T ss_pred             HHHHHhCC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCC---------HH
Confidence            55555666 89999999997 678899999999999999987654323345566778999999876443         46


Q ss_pred             HHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      .++++++++.+|++++. .++|+++++++||+.+.+++..||+|++++
T Consensus       300 ~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          300 DTREALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             HHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             HHHHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            78999999999999976 468999999999999999888899999885

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3.1e-53  Score=380.87  Aligned_cols=302  Identities=21%  Similarity=0.285  Sum_probs=265.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         5 mka~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~V~   71 (348)
T 3two_A            5 SKGFAIFSKDEH-----------FKPHDFSRHA-VGPRDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGIIK   71 (348)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEEEE
T ss_pred             EEEEEEccCCCC-----------CeEEEeeCCC-CCCCeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEEEE
Confidence            899999988765           4557899999 59999999999999999999999987653 4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------C----------CCcceeeEeeeCCCeeeCCCCCC
Q 019049           81 AVGPNVSNFKVGDTVCGFA---------------------------A----------LGSFAQFIVADQSELFPVPKGCD  123 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~---------------------------~----------~g~~~~~~~~~~~~~~~~p~~~~  123 (347)
                      ++|++|++|++||||+...                           .          +|+|+||++++++.++++|++++
T Consensus        72 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  151 (348)
T 3two_A           72 EVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAP  151 (348)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSC
T ss_pred             EECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCC
Confidence            9999999999999997521                           1          29999999999999999999999


Q ss_pred             HHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC
Q 019049          124 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN  203 (347)
Q Consensus       124 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~  203 (347)
                      +++||++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|++++++++|+++++++|+++++ .+.
T Consensus       152 ~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~  228 (348)
T 3two_A          152 LEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDP  228 (348)
T ss_dssp             HHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSG
T ss_pred             HHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCH
Confidence            9999999999999999995 569999999999998 9999999999999999999999999999999999999998 322


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecC-CCCCCcchhHhh-hcceEEEEEEeccc
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFAS-GEIPVIPANIAL-VKNWTVHGLYWGSY  280 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~  280 (347)
                      ..+            ..++|++|||+|.+ .+..++++++++|+++.+|... .....++...++ .+++++.++.... 
T Consensus       229 ~~~------------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-  295 (348)
T 3two_A          229 KQC------------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG-  295 (348)
T ss_dssp             GGC------------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC-
T ss_pred             HHH------------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC-
Confidence            211            12899999999987 8899999999999999998776 443335555666 9999999987655 


Q ss_pred             cccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCC
Q 019049          281 KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                              .+.++++++++.+|++++.+ ++|+++++++||+.+.+++..||+|++++++
T Consensus       296 --------~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          296 --------IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             --------HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             --------HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence                    46789999999999999865 7999999999999999999999999999654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.1e-52  Score=377.17  Aligned_cols=309  Identities=25%  Similarity=0.364  Sum_probs=272.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-------CCCCCcccCC
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGS   73 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-------~~~~p~~~G~   73 (347)
                      |||+++.++|.+           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++.       ...+|.++||
T Consensus         1 Mka~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~   68 (347)
T 1jvb_A            1 MRAVRLVEIGKP-----------LSLQEIGVPK-PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH   68 (347)
T ss_dssp             CEEEEECSTTSC-----------CEEEECCCCC-CCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCC
T ss_pred             CeEEEEecCCCC-----------eEEEEeeCCC-CCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccc
Confidence            999999998854           3346899999 59999999999999999999999886542       2357999999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeC-CCeeeCCCCCCHH
Q 019049           74 DYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ-SELFPVPKGCDLL  125 (347)
Q Consensus        74 e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~-~~~~~~p~~~~~~  125 (347)
                      |++|+|+++|+++++|++||||+++.                           .+|+|+||+++++ +.++++ ++++++
T Consensus        69 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~  147 (347)
T 1jvb_A           69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAV  147 (347)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHH
T ss_pred             cceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHH
Confidence            99999999999999999999997652                           3599999999999 999999 999999


Q ss_pred             HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCC
Q 019049          126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNE  204 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~  204 (347)
                      +||.+++++.|||+++. .+++++|++|||+|++|++|++++|+++.. |++|+++++++++++.++++|++.++++.+.
T Consensus       148 ~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~  226 (347)
T 1jvb_A          148 EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ  226 (347)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTS
T ss_pred             HcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCc
Confidence            99999999999999994 589999999999999779999999999999 9999999999999999999999999998877


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecC-CCCCCcchhHhhhcceEEEEEEeccccc
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFAS-GEIPVIPANIALVKNWTVHGLYWGSYKI  282 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      ++   .+.+.+.+..+++|++||++|.+ .+..++++++++|+++.+|... ..  .++...++.+++++.++....   
T Consensus       227 ~~---~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~---  298 (347)
T 1jvb_A          227 DP---LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL--HYHAPLITLSEIQFVGSLVGN---  298 (347)
T ss_dssp             CH---HHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC--CCCHHHHHHHTCEEEECCSCC---
T ss_pred             cH---HHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC--CCCHHHHHhCceEEEEEeccC---
Confidence            66   55556666524899999999986 7889999999999999998765 33  456666788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                            .+.++++++++.+|++++.++++|+++++++||+.+.+++..||+|+++
T Consensus       299 ------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          299 ------QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             ------HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ------HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence                  4778999999999999988989999999999999999998889999974

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.2e-53  Score=381.01  Aligned_cols=311  Identities=26%  Similarity=0.332  Sum_probs=271.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.+           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         7 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~   72 (371)
T 1f8f_A            7 IIAAVTPCKGAD-----------FELQALKIRQ-PQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIE   72 (371)
T ss_dssp             EEEEEBCSTTCC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEE
T ss_pred             ceEEEEcCCCCC-----------eEEEEecCCC-CCCCEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcccceEEE
Confidence            899999998854           3346899999 5999999999999999999999998764  3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCcceeeEeee
Q 019049           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (347)
                      ++|++|++|++||||+...                                                 .+|+|+||++++
T Consensus        73 ~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~  152 (371)
T 1f8f_A           73 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  152 (371)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             EeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEec
Confidence            9999999999999998621                                                 248999999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      ++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++++
T Consensus       153 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          153 ENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             GGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             hhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            99999999999999999999999999999988899999999999997 9999999999999999 799999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhc
Q 019049          191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVK  268 (347)
Q Consensus       191 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~  268 (347)
                      +++|+++++++.+.++   .+.+.+.+++ ++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.+
T Consensus       232 ~~lGa~~vi~~~~~~~---~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~  307 (371)
T 1f8f_A          232 KQLGATHVINSKTQDP---VAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLG  307 (371)
T ss_dssp             HHHTCSEEEETTTSCH---HHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHT
T ss_pred             HHcCCCEEecCCccCH---HHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhC
Confidence            9999999999988776   5666777776 99999999997 5788999999999999999876532 234566667889


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      ++++.+++...+.      ..+.++++++++.+|++++  .+++ |+|+++++||+.+.+++. +|+|+++.
T Consensus       308 ~~~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          308 GKTILGVVEGSGS------PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             TCEEEECSGGGSC------HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CCEEEEeCCCCCc------hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            9999987654321      1467899999999999986  4777 999999999999998875 79999863

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3e-53  Score=375.98  Aligned_cols=304  Identities=19%  Similarity=0.243  Sum_probs=251.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++  .++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         5 Mka~~~~~--~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~   71 (315)
T 3goh_A            5 HQVWAYQT--KTHS---------VTLNSVDIPA-LAADDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIV   71 (315)
T ss_dssp             EEEEEEET--TTTE---------EEEEEEECCC-CCTTEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEE
T ss_pred             eEEEEEeC--CCCe---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEE
Confidence            89999986  2221         4456899999 59999999999999999999999998753 4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC---CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049           81 AVGPNVSNFKVGDTVCGFAA---LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      ++|+++++|++||||++...   +|+|+||++++++.++++|+++++++||+++++++|||+++ +.+++++|++|||+|
T Consensus        72 ~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G  150 (315)
T 3goh_A           72 KVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVG  150 (315)
T ss_dssp             EECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEEC
T ss_pred             EeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEEC
Confidence            99999999999999998763   69999999999999999999999999999999999999999 899999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHH
Q 019049          158 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  237 (347)
Q Consensus       158 ~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  237 (347)
                      + |++|++++|+|+.+|++|++++ +++|+++++++|++++++  +  . +.   +     +.++|++|||+|++.+..+
T Consensus       151 a-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~--d--~-~~---v-----~~g~Dvv~d~~g~~~~~~~  215 (315)
T 3goh_A          151 F-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYR--E--P-SQ---V-----TQKYFAIFDAVNSQNAAAL  215 (315)
T ss_dssp             C-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEES--S--G-GG---C-----CSCEEEEECC-------TT
T ss_pred             C-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEc--C--H-HH---h-----CCCccEEEECCCchhHHHH
Confidence            9 9999999999999999999999 899999999999999984  2  2 11   1     6799999999999888889


Q ss_pred             HhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc-cCch---hHHHHHHHHHHHHHcCceeeeeceeeC
Q 019049          238 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPH---VLEDSLRELLLWAAKGLITIHISHTYS  313 (347)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~l~~g~l~~~~~~~~~  313 (347)
                      +++++++|+++.++.......    ...+.+.+.+....+..... ..+.   ...+.++++++++.+|++++.++++|+
T Consensus       216 ~~~l~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~  291 (315)
T 3goh_A          216 VPSLKANGHIICIQDRIPAPI----DPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFR  291 (315)
T ss_dssp             GGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEE
T ss_pred             HHHhcCCCEEEEEeCCCCccc----cchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEec
Confidence            999999999999975432111    12244566666665544332 2333   345678999999999999999999999


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          314 PSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       314 ~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      ++++++||+.+.  +..||+|+++++
T Consensus       292 l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          292 FEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             GGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             HHHHHHHHHHHH--hcCCcEEEEecC
Confidence            999999999998  778899999863

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.4e-53  Score=380.45  Aligned_cols=310  Identities=21%  Similarity=0.262  Sum_probs=268.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHH-HHhccCCCCCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL-QILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~-~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |||+++.+++++           . ++++|.|+ |+++||+|||.++++|++|++ .+.|.++  ..+|.++|||++|+|
T Consensus         1 MkA~~~~~~~~~-----------~-~~e~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~p~v~G~E~~G~V   65 (352)
T 3fpc_A            1 MKGFAMLSIGKV-----------G-WIEKEKPA-PGPFDAIVRPLAVAPCTSDIHTVFEGAIG--ERHNMILGHEAVGEV   65 (352)
T ss_dssp             CEEEEEEETTEE-----------E-EEECCCCC-CCTTCEEEEEEEEECCHHHHHHHHSCTTC--CCSSEECCCEEEEEE
T ss_pred             CeEEEEccCCCc-----------e-EEeCCCCC-CCCCeEEEEeCEEeEcccchHHHhCCCCC--CCCCcccCCcceEEE
Confidence            999999999974           2 36899999 699999999999999999999 5577654  357999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEe------------------------------cCCCcceeeEeeeCC--CeeeCCCCCCHHHH
Q 019049           80 DAVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQS--ELFPVPKGCDLLAA  127 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~a  127 (347)
                      +++|+++++|++||||+..                              ..+|+|+||++++++  .++++|+++++++|
T Consensus        66 ~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~a  145 (352)
T 3fpc_A           66 VEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAA  145 (352)
T ss_dssp             EEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHH
T ss_pred             EEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHH
Confidence            9999999999999999852                              146999999999986  89999999999999


Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV  206 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  206 (347)
                      |+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++++++++.++
T Consensus       146 a~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~  223 (352)
T 3fpc_A          146 VMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI  223 (352)
T ss_dssp             TTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCH
T ss_pred             hhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCH
Confidence            99999999999998 7899999999999997 9999999999999999 8999999999999999999999999988887


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCC-Ccchh--HhhhcceEEEEEEeccccc
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP-VIPAN--IALVKNWTVHGLYWGSYKI  282 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~  282 (347)
                         .+.+.+.+++.++|++|||+|. ..+..++++++++|+++.+|....... ..+..  .+..++.++.++.....  
T Consensus       224 ---~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--  298 (352)
T 3fpc_A          224 ---VEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGG--  298 (352)
T ss_dssp             ---HHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCH--
T ss_pred             ---HHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCc--
Confidence               7778888888899999999998 578999999999999999987653221 11111  12357788887653221  


Q ss_pred             cCchhHHHHHHHHHHHHHcCceeee--eceeeC-hhhHHHHHHHHHcCCc-ceeEEEEeC
Q 019049          283 HRPHVLEDSLRELLLWAAKGLITIH--ISHTYS-PSEANLAFSAIEDRKV-IGKVMIAFD  338 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~-~~~~~~a~~~~~~~~~-~gk~vv~~~  338 (347)
                            .+.++++++++.+|++++.  ++++|+ |+++++||+.+.+++. .+|+|++++
T Consensus       299 ------~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          299 ------RLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             ------HHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             ------hhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence                  4678999999999999974  889999 9999999999998665 489999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.2e-53  Score=383.39  Aligned_cols=306  Identities=20%  Similarity=0.256  Sum_probs=266.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecc--ccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKT--EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~   78 (347)
                      |||+++.++|.+           +.+++  +|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+
T Consensus         7 mka~~~~~~~~~-----------l~~~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~   73 (360)
T 1piw_A            7 FEGIAIQSHEDW-----------KNPKKTKYDPKP-FYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGK   73 (360)
T ss_dssp             EEEEEECCSSST-----------TSCEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEE
T ss_pred             eEEEEEecCCCC-----------eeEEeccccCCC-CCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEE
Confidence            899999998753           23357  89999 59999999999999999999999886542 35799999999999


Q ss_pred             EEEeCCCCC-CCCCCCEEEE---------------------------e--------cCCCcceeeEeeeCCCeeeCCCCC
Q 019049           79 VDAVGPNVS-NFKVGDTVCG---------------------------F--------AALGSFAQFIVADQSELFPVPKGC  122 (347)
Q Consensus        79 V~~vG~~v~-~~~~Gd~V~~---------------------------~--------~~~g~~~~~~~~~~~~~~~~p~~~  122 (347)
                      |+++|++|+ +|++||||+.                           +        ..+|+|+||++++++.++++|+++
T Consensus        74 V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~  153 (360)
T 1piw_A           74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENI  153 (360)
T ss_dssp             EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTS
T ss_pred             EEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCC
Confidence            999999999 9999999942                           1        236999999999999999999999


Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS  202 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~  202 (347)
                      ++++||++++++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|+++++++.
T Consensus       154 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~  231 (360)
T 1piw_A          154 PSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL  231 (360)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCc
Confidence            999999999999999999965 89999999999999 9999999999999999999999999999999999999999987


Q ss_pred             CC-CchhhHHHHHHHhcCCcccEEEeCCCc---cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEec
Q 019049          203 NE-SVIPSVKEFLKARKLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       203 ~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      +. ++   .+.+.     .++|++|||+|.   ..+..++++++++|+++.+|.... ...++...++.+++++.++...
T Consensus       232 ~~~~~---~~~~~-----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~  302 (360)
T 1piw_A          232 EEGDW---GEKYF-----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALG  302 (360)
T ss_dssp             GTSCH---HHHSC-----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCC
T ss_pred             CchHH---HHHhh-----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecC
Confidence            65 54   22221     489999999997   678899999999999999987654 3245555678899999987654


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhh--HHHHHHHHHcCCcceeEEEEeCCC
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE--ANLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~--~~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                      .         .+.++++++++.+|++++.+ ++|++++  +++||+.+.+++..||+|++++++
T Consensus       303 ~---------~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~  356 (360)
T 1piw_A          303 S---------IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDK  356 (360)
T ss_dssp             C---------HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCHH
T ss_pred             C---------HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCcc
Confidence            3         46789999999999999888 8999999  999999999998889999998643

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.6e-52  Score=379.70  Aligned_cols=308  Identities=20%  Similarity=0.309  Sum_probs=264.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus        10 mka~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~   75 (373)
T 1p0f_A           10 CKAAVAWEPHKP-----------LSLETITVAP-PKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVE   75 (373)
T ss_dssp             EEEEEBSSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEE
T ss_pred             eEEEEEEcCCCC-----------eeEEEeeCCC-CCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEE
Confidence            899999998854           3346899999 5999999999999999999999988764  4579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|++|++|++||||++..                                                ..|+|+||+++++
T Consensus        76 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  155 (373)
T 1p0f_A           76 SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD  155 (373)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred             EECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEch
Confidence            9999999999999998652                                                1389999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|++++++ ||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++
T Consensus       156 ~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  233 (373)
T 1p0f_A          156 IAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI  233 (373)
T ss_dssp             TSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             hhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            9999999999999 99999999999999888899999999999997 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCC--CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCC-CCCcchhHhh
Q 019049          192 SLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGE-IPVIPANIAL  266 (347)
Q Consensus       192 ~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  266 (347)
                      ++|+++++++.+  .++   .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|..... ...++...++
T Consensus       234 ~lGa~~vi~~~~~~~~~---~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  309 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPI---YEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL  309 (373)
T ss_dssp             HTTCSEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH
T ss_pred             HcCCcEEEecccccchH---HHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhc
Confidence            999999998874  445   5566667765 99999999997 6789999999999 999999876532 1223444555


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++ ++.+++...+.   +    +.++++++++.+|++++  .++++|+++++++||+.+.+++. +|+|++|
T Consensus       310 ~~~-~i~g~~~~~~~---~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          310 TGR-SLKGSVFGGFK---G----EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             TTC-EEEECSGGGCC---G----GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             cCc-eEEeeccCCcC---H----HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            677 88887643321   1    46788999999999984  57899999999999999987775 6999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-52  Score=378.42  Aligned_cols=310  Identities=22%  Similarity=0.333  Sum_probs=266.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHH-HHhccCCCCCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL-QILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~-~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |||+++.+++++           +.++++|.|+ |+++||+|||.+++||++|++ .+.|.++  ..+|.++|||++|+|
T Consensus         9 mka~~~~~~~~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V   74 (374)
T 1cdo_A            9 CKAAVAWEANKP-----------LVIEEIEVDV-PHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIV   74 (374)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEE
T ss_pred             eEEEEEecCCCC-----------eEEEEeeCCC-CCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEE
Confidence            899999998864           3346899999 599999999999999999999 8888654  457999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeee
Q 019049           80 DAVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVAD  111 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~  111 (347)
                      +++|++|++|++||||++..                                                ..|+|+||++++
T Consensus        75 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  154 (374)
T 1cdo_A           75 ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVN  154 (374)
T ss_dssp             EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEE
T ss_pred             EEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEc
Confidence            99999999999999998652                                                138999999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      ++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++++
T Consensus       155 ~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          155 QIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             hhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            99999999999999999999999999999888899999999999997 9999999999999999 899999999999999


Q ss_pred             HhcCCcEEEeCCC--CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchhHhh
Q 019049          191 KSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIAL  266 (347)
Q Consensus       191 ~~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~  266 (347)
                      +++|+++++++.+  .++   .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|........++...++
T Consensus       234 ~~lGa~~vi~~~~~~~~~---~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~  309 (374)
T 1cdo_A          234 KVFGATDFVNPNDHSEPI---SQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLI  309 (374)
T ss_dssp             HHTTCCEEECGGGCSSCH---HHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHH
T ss_pred             HHhCCceEEeccccchhH---HHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHh
Confidence            9999999998874  345   4556666665 89999999997 5778999999999 9999998765422223444566


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++ ++.++....+.      ..+.++++++++.+|++++  .++++|+|+++++||+.+.+++. +|+|++|
T Consensus       310 ~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          310 AGR-TWKGSMFGGFK------GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             TTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCC-eEEEEecCCCC------cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            677 88887644321      1467899999999999984  57899999999999999988875 6999875

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1e-52  Score=380.22  Aligned_cols=321  Identities=21%  Similarity=0.224  Sum_probs=262.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++..           .+.+++|.|+ |+++||+|||.++++|++|++.+.+.    ..+|.++|||++|+|+
T Consensus        12 mkA~v~~~~~~l-----------~~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~~G~V~   75 (371)
T 3gqv_A           12 QTALTVNDHDEV-----------TVWNAAPCPM-LPRDQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDYAGTVV   75 (371)
T ss_dssp             EEEEEECTTSCE-----------EEEEEECCCC-CCTTSEEEEEEEEECCGGGGC---------CCTTSCCCSEEEEEEE
T ss_pred             ceeEEEcCCCce-----------EEeccCCCCC-CCCCEEEEEEEEEEcCHHHHHHhhcC----CCCCccCccccEEEEE
Confidence            899999988753           3333899999 59999999999999999999988763    2468999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec--------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh-cCC----
Q 019049           81 AVGPNVSNFKVGDTVCGFA--------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR-AQL----  147 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~--------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~-~~~----  147 (347)
                      ++|++|++|++||||++.+        .+|+|+||++++++.++++|+++++++||++++++.|||+++... .++    
T Consensus        76 ~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~  155 (371)
T 3gqv_A           76 AVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPS  155 (371)
T ss_dssp             EECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSS
T ss_pred             EeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCc
Confidence            9999999999999999986        359999999999999999999999999999999999999999777 553    


Q ss_pred             -------CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          148 -------SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       148 -------~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                             ++|++|||+|++|++|++++|+|+..|++|++++ +++|+++++++|+++++|+++.++   .+.+.+.+++ 
T Consensus       156 ~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~---~~~v~~~t~g-  230 (371)
T 3gqv_A          156 ADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNL---AQTIRTYTKN-  230 (371)
T ss_dssp             CSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTH---HHHHHHHTTT-
T ss_pred             cccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchH---HHHHHHHccC-
Confidence                   8999999999999999999999999999999987 789999999999999999998887   6677777766 


Q ss_pred             cccEEEeCCCc-cchHHHHhcc-ccCCEEEEEeecCCC---CC--Cc---chhHhhhcceEEEEEEeccccccCchhHHH
Q 019049          221 GVDVLYDPVGG-KLTKESLKLL-NWGAQILVIGFASGE---IP--VI---PANIALVKNWTVHGLYWGSYKIHRPHVLED  290 (347)
Q Consensus       221 ~~d~v~d~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~---~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      ++|++|||+|+ ..+..+++++ +++|+++.+|.....   ..  ..   ....++.+++++.+++.......+.+...+
T Consensus       231 ~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~  310 (371)
T 3gqv_A          231 NLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGED  310 (371)
T ss_dssp             CCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHH
T ss_pred             CccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHH
Confidence            49999999998 5678899999 599999999854421   00  01   112456778888776433222222233446


Q ss_pred             HHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcce-eEEEEeCCCCC
Q 019049          291 SLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIG-KVMIAFDDMKS  342 (347)
Q Consensus       291 ~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~g-k~vv~~~~~~~  342 (347)
                      .++++++++.+|++++.  +++.|+++++++||+.+.+++..| |+|+++++.+.
T Consensus       311 ~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~~  365 (371)
T 3gqv_A          311 LWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPLE  365 (371)
T ss_dssp             HHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC--
T ss_pred             HHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCccc
Confidence            66789999999999975  455699999999999999998887 67777766554

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2.8e-52  Score=378.55  Aligned_cols=309  Identities=26%  Similarity=0.381  Sum_probs=265.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.+           +.++++|.|+ |+++||+|||.+++||++|++.+.|. + ...+|.++|||++|+|+
T Consensus         9 mka~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~-~-~~~~P~v~GhE~~G~V~   74 (376)
T 1e3i_A            9 CKAAIAWKTGSP-----------LCIEEIEVSP-PKACEVRIQVIATCVCPTDINATDPK-K-KALFPVVLGHECAGIVE   74 (376)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHTTCTT-S-CCCSSBCCCCEEEEEEE
T ss_pred             eeEEEEecCCCC-----------eEEEEeeCCC-CCCCeEEEEEeEEeEchhhHHHhcCC-C-CCCCCcccCccccEEEE
Confidence            899999998854           3346889999 59999999999999999999988875 2 23579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------------------------------CCCcceeeE
Q 019049           81 AVGPNVSNFKVGDTVCGFA----------------------------------------------------ALGSFAQFI  108 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~----------------------------------------------------~~g~~~~~~  108 (347)
                      ++|++|++|++||||++..                                                    ..|+|+||+
T Consensus        75 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~  154 (376)
T 1e3i_A           75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYT  154 (376)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             EECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEE
Confidence            9999999999999998641                                                    138999999


Q ss_pred             eeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhH
Q 019049          109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI  187 (347)
Q Consensus       109 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~  187 (347)
                      +++++.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+
T Consensus       155 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  233 (376)
T 1e3i_A          155 VVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF  233 (376)
T ss_dssp             EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             EeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            99999999999999999999999999999999888899999999999997 9999999999999999 899999999999


Q ss_pred             HHHHhcCCcEEEeCCC--CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchh
Q 019049          188 KFLKSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPAN  263 (347)
Q Consensus       188 ~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~  263 (347)
                      ++++++|+++++|+++  .++   .+.+.+.+.+ ++|++|||+|. ..+..++++++++ |+++.+|..... ..++..
T Consensus       234 ~~a~~lGa~~vi~~~~~~~~~---~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~  308 (376)
T 1e3i_A          234 PKAKALGATDCLNPRELDKPV---QDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE-MTIPTV  308 (376)
T ss_dssp             HHHHHTTCSEEECGGGCSSCH---HHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE-EEEEHH
T ss_pred             HHHHHhCCcEEEccccccchH---HHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCc-cccCHH
Confidence            9999999999998874  445   5556666765 99999999997 6789999999999 999999873322 234445


Q ss_pred             HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          264 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++.++ ++.++....+.      ..+.++++++++.+|++++  .++++|+|+++++||+.+.+++ .+|+|++|
T Consensus       309 ~~~~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          309 DVILGR-SINGTFFGGWK------SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HHHTTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             HhhccC-eEEEEecCCCC------cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence            566777 88887643321      1467899999999999984  5789999999999999998877 46999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=4.8e-52  Score=376.73  Aligned_cols=310  Identities=21%  Similarity=0.335  Sum_probs=265.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++.  .+|.++|||++|+|+
T Consensus         9 mkA~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~   74 (374)
T 2jhf_A            9 CKAAVLWEEKKP-----------FSIEEVEVAP-PKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVE   74 (374)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEE
T ss_pred             EEEEEEecCCCc-----------eEEEEccCCC-CCCCeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCceEEEE
Confidence            899999998864           3346889999 59999999999999999999999987643  379999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|++|++|++||||++..                                                ..|+|+||+++++
T Consensus        75 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  154 (374)
T 2jhf_A           75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE  154 (374)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEG
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEch
Confidence            9999999999999998642                                                1389999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++
T Consensus       155 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  233 (374)
T 2jhf_A          155 ISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK  233 (374)
T ss_dssp             GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             HHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            9999999999999999999999999999988899999999999997 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCC--CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCC-CCCcchhHhh
Q 019049          192 SLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGE-IPVIPANIAL  266 (347)
Q Consensus       192 ~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  266 (347)
                      ++|+++++|+.+  .++   .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|..... ...++...++
T Consensus       234 ~lGa~~vi~~~~~~~~~---~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  309 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPI---QEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLL  309 (374)
T ss_dssp             HTTCSEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred             HhCCceEecccccchhH---HHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHh
Confidence            999999998875  345   4556666665 89999999997 6778999999999 999999876532 2223444566


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++ ++.+++...+.      ..+.++++++++.+|++++  .++++|+++++++||+.+.+++. +|+|++|
T Consensus       310 ~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          310 SGR-TWKGAIFGGFK------SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             TTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCC-eEEEeccCCCC------hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            677 88887644321      1467899999999999984  57899999999999999988775 6999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3.7e-53  Score=393.02  Aligned_cols=330  Identities=23%  Similarity=0.295  Sum_probs=276.2

Q ss_pred             CceEEecccCCCCc-----cccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhcc-------------C-
Q 019049            1 MEALVCRKLGDPTV-----SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-------------Y-   61 (347)
Q Consensus         1 m~a~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~-------------~-   61 (347)
                      |||+++.+++...-     ...++... +.++++|.|+ |+++||+|||.+++||++|++...+.             . 
T Consensus        31 mkA~v~~~~~~~~~~~~~~~~~~~~~~-l~~~e~p~P~-~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~  108 (456)
T 3krt_A           31 YRAITVHKDETEMFAGLETRDKDPRKS-IHLDDVPVPE-LGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVS  108 (456)
T ss_dssp             EEEEEEEGGGTTTTTTCCGGGCCHHHH-CEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSC
T ss_pred             eEEEEEeccccccccccccccCCCCCC-cEEEEccCCC-CCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccc
Confidence            89999998731000     00001122 3346899999 59999999999999999998764321             1 


Q ss_pred             --CCCCCCC-cccCCceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeee
Q 019049           62 --QEKPPLP-FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVAD  111 (347)
Q Consensus        62 --~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~  111 (347)
                        ..+..+| .++|||++|+|+++|++|++|++||+|++.+                           .+|+|+||++++
T Consensus       109 ~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~  188 (456)
T 3krt_A          109 DLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVK  188 (456)
T ss_dssp             HHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEE
T ss_pred             cccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEec
Confidence              1122467 6899999999999999999999999998753                           149999999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  189 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~  189 (347)
                      ++.++++|+++++++||+++.++.|||+++...  +++++|++|||+|++|++|++++|+|+..|++|++++++++|+++
T Consensus       189 ~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~  268 (456)
T 3krt_A          189 SNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEI  268 (456)
T ss_dssp             GGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             hHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            999999999999999999999999999998654  789999999999999999999999999999999999999999999


Q ss_pred             HHhcCCcEEEeCCCCCch--------------hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCC
Q 019049          190 LKSLGVDHVVDLSNESVI--------------PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       190 ~~~~g~~~v~~~~~~~~~--------------~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      ++++|++.++++.+.++.              ...+.+.+.+++.++|++|||+|.+.+..++++++++|+++.+|...+
T Consensus       269 ~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          269 CRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC
T ss_pred             HHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC
Confidence            999999999998876541              113667777888899999999999888999999999999999987765


Q ss_pred             CCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049          256 EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  335 (347)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv  335 (347)
                      ....++...++.+++++.|+....         .+.+.++++++.+|++++.++++|+|+++++||+.+.+++..||+||
T Consensus       349 ~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv  419 (456)
T 3krt_A          349 YMHEYDNRYLWMSLKRIIGSHFAN---------YREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGV  419 (456)
T ss_dssp             SEEEEEHHHHHHTTCEEEECCSCC---------HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEE
T ss_pred             cccccCHHHHHhcCeEEEEeccCC---------HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEE
Confidence            444456667888999999887655         24566789999999999999999999999999999999999999999


Q ss_pred             EeCCCC
Q 019049          336 AFDDMK  341 (347)
Q Consensus       336 ~~~~~~  341 (347)
                      .+.+++
T Consensus       420 ~~~~~~  425 (456)
T 3krt_A          420 LCLAPE  425 (456)
T ss_dssp             ESSCSS
T ss_pred             EeCCCC
Confidence            986543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-52  Score=380.97  Aligned_cols=308  Identities=22%  Similarity=0.325  Sum_probs=267.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|+.           +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++ ...+|.++|||++|+|+
T Consensus        18 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE~~G~V~   84 (380)
T 1vj0_A           18 AHAMVLEKFNQP-----------LVYKEFEISD-IPRGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGRVV   84 (380)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             eEEEEEecCCCC-----------eEEEEccCCC-CCCCEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcCcEEEEE
Confidence            899999999822           3346889999 5999999999999999999999998654 23579999999999999


Q ss_pred             EeCCCCC------CCCCCCEEEEe------------------------------------cCCCcceeeEee-eCCCeee
Q 019049           81 AVGPNVS------NFKVGDTVCGF------------------------------------AALGSFAQFIVA-DQSELFP  117 (347)
Q Consensus        81 ~vG~~v~------~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~-~~~~~~~  117 (347)
                      ++| +|+      +|++||||++.                                    ..+|+|+||+++ +++.+++
T Consensus        85 ~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~  163 (380)
T 1vj0_A           85 EVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK  163 (380)
T ss_dssp             EES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEE
T ss_pred             EeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEE
Confidence            999 999      99999999874                                    126999999999 9999999


Q ss_pred             CCCCCCHH-HHccCcchHHHHHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcC
Q 019049          118 VPKGCDLL-AAAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG  194 (347)
Q Consensus       118 ~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g  194 (347)
                      +|++++++ +|++++ +++|||+++ ..++ +++|++|||+| +|++|++++|+|+.+| ++|++++++++++++++++|
T Consensus       164 iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG  240 (380)
T 1vj0_A          164 VSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG  240 (380)
T ss_dssp             ECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT
T ss_pred             CCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC
Confidence            99999999 677665 999999999 5688 99999999999 5999999999999999 59999999999999999999


Q ss_pred             CcEEEeCC---CCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC-CCCCCcchhH-hhhc
Q 019049          195 VDHVVDLS---NESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS-GEIPVIPANI-ALVK  268 (347)
Q Consensus       195 ~~~v~~~~---~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~-~~~~  268 (347)
                      +++++++.   +.++   .+.+.+.+++.++|++|||+|. ..+..++++++++|+++.+|... +....++... ++.+
T Consensus       241 a~~vi~~~~~~~~~~---~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  317 (380)
T 1vj0_A          241 ADLTLNRRETSVEER---RKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLK  317 (380)
T ss_dssp             CSEEEETTTSCHHHH---HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTT
T ss_pred             CcEEEeccccCcchH---HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhC
Confidence            99999987   4444   5667777777789999999997 57899999999999999998766 4223355556 7889


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHc--CceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK--GLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      ++++.+++...         .+.++++++++.+  |++++.++++|+|+++++||+.+.+++.. |+|++++
T Consensus       318 ~~~i~g~~~~~---------~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          318 NATFKGIWVSD---------TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             TCEEEECCCCC---------HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             CeEEEEeecCC---------HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            99999976543         4778999999999  99988889999999999999999998888 9999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=5.3e-52  Score=376.42  Aligned_cols=311  Identities=24%  Similarity=0.342  Sum_probs=266.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++++           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         7 mkA~~~~~~~~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   73 (373)
T 2fzw_A            7 CKAAVAWEAGKP-----------LSIEEIEVAP-PKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVE   73 (373)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEE
T ss_pred             eEEEEEecCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEE
Confidence            899999998864           3346889999 59999999999999999999999987642 3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|++|++|++||||++..                                                ..|+|+||+++++
T Consensus        74 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  153 (373)
T 2fzw_A           74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVAD  153 (373)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEch
Confidence            9999999999999998652                                                1489999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  191 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~  191 (347)
                      +.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++
T Consensus       154 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          154 ISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             GGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             hheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            9999999999999999999999999999888899999999999997 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCC--CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCC-CCCcchhHhh
Q 019049          192 SLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGE-IPVIPANIAL  266 (347)
Q Consensus       192 ~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  266 (347)
                      ++|+++++++.+  .++   .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|..... ...++...++
T Consensus       233 ~lGa~~vi~~~~~~~~~---~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  308 (373)
T 2fzw_A          233 EFGATECINPQDFSKPI---QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV  308 (373)
T ss_dssp             HHTCSEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred             HcCCceEeccccccccH---HHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHh
Confidence            999999998875  345   5556666665 99999999997 5778999999999 999999876532 1223444566


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .++ ++.++....+.      ..+.++++++++.+|++++  .++++|+|+++++||+.+.+++. +|+|++|
T Consensus       309 ~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          309 TGR-TWKGTAFGGWK------SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             TTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             cCC-EEEEeccCCCC------cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            677 88887644321      1467899999999999984  57899999999999999988875 6999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=5.5e-53  Score=378.48  Aligned_cols=308  Identities=23%  Similarity=0.317  Sum_probs=266.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (347)
                      |||+++.++|++           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++.  ...+|.++|||++|+
T Consensus         1 Mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   68 (343)
T 2dq4_A            1 MRALAKLAPEEG-----------LTLVDRPVPE-PGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGV   68 (343)
T ss_dssp             CEEEEECSSSSS-----------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEE
T ss_pred             CeEEEEeCCCCc-----------EEEEeccCCC-CCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEE
Confidence            999999999863           3346899999 59999999999999999999999885431  135789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe---------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049           79 VDAVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  131 (347)
                      |+++|+++++|++||||++.                           ..+|+|+||++++++.++++|+++++++||++ 
T Consensus        69 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-  147 (343)
T 2dq4_A           69 VEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-  147 (343)
T ss_dssp             EEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-
T ss_pred             EEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-
Confidence            99999999999999999874                           24699999999999999999999999999877 


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      .++.|||+++...+++ +|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++ +++++++.+.++   .
T Consensus       148 ~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~---~  221 (343)
T 2dq4_A          148 EPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDL---L  221 (343)
T ss_dssp             HHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCH---H
T ss_pred             hHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCH---H
Confidence            6788999999557889 9999999999 9999999999999999 999999999999999999 999999988776   5


Q ss_pred             HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcch-hHhhhcceEEEEEEeccccccCchhH
Q 019049          211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVL  288 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      +.+.+.+ +.++|++||++|. ..+..++++++++|+++.+|..... ..++. ..++.+++++.|++...        .
T Consensus       222 ~~~~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~--------~  291 (343)
T 2dq4_A          222 EVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDP-IRFDLAGELVMRGITAFGIAGRR--------L  291 (343)
T ss_dssp             HHHHHHH-SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-EEECHHHHTGGGTCEEEECCSCC--------T
T ss_pred             HHHHHhc-CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ceeCcHHHHHhCceEEEEeecCC--------C
Confidence            5666667 6789999999998 6788999999999999999875432 23455 56788999999875431        1


Q ss_pred             HHHHHHHHHHHHcCce--eeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          289 EDSLRELLLWAAKGLI--TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       289 ~~~~~~~~~~l~~g~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      .+.++++++++.+|++  ++.++++|+++++++||+.+.+++. ||+|++++
T Consensus       292 ~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             THHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            3678899999999996  4568899999999999999998887 99999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.8e-52  Score=375.83  Aligned_cols=309  Identities=23%  Similarity=0.335  Sum_probs=267.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhc-cCC-CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG-KYQ-EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g-~~~-~~~~~p~~~G~e~~G~   78 (347)
                      |||+++.++|..           +.++++|.|+ |+++||+|||.++++|++|++.+.| .++ ....+|.++|||++|+
T Consensus         5 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   72 (348)
T 2d8a_A            5 MVAIMKTKPGYG-----------AELVEVDVPK-PGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGE   72 (348)
T ss_dssp             EEEEEECSSSSS-----------CEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEE
T ss_pred             ceEEEEECCCCC-----------EEEEECCCCC-CCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEE
Confidence            899999998842           3346899999 5999999999999999999999988 432 1135789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  131 (347)
                      |+++|++|++|++||||++..                           .+|+|+||++++++.++++|+++++++||++ 
T Consensus        73 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-  151 (348)
T 2d8a_A           73 VVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-  151 (348)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-
T ss_pred             EEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-
Confidence            999999999999999998752                           3599999999999999999999999999977 


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      .++.|||+++ ..+++ +|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++++++++.++   .
T Consensus       152 ~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~  225 (348)
T 2d8a_A          152 EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDV---V  225 (348)
T ss_dssp             HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCH---H
T ss_pred             hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCH---H
Confidence            4889999999 77889 9999999999 9999999999999999 9999999999999999999999999888776   6


Q ss_pred             HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcch-hHhhhcceEEEEEEeccccccCchhH
Q 019049          211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVL  288 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      +.+.+.+++.++|++|||+|. ..+..++++++++|+++.+|..... ..++. ..++.+++++.+++....        
T Consensus       226 ~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~--------  296 (348)
T 2d8a_A          226 KEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK-VTIDFNNLIIFKALTIYGITGRHL--------  296 (348)
T ss_dssp             HHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CCCCHHHHTTTTTCEEEECCCCCS--------
T ss_pred             HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-cccCchHHHHhCCcEEEEecCCCc--------
Confidence            667777877789999999998 6778999999999999999876543 33555 667789999998754321        


Q ss_pred             HHHHHHHHHHHHcCcee--eeeceeeC-hhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          289 EDSLRELLLWAAKGLIT--IHISHTYS-PSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       289 ~~~~~~~~~~l~~g~l~--~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      .+.++++++++.+|+++  +.++++|+ ++++++||+.+.+ ...||+|++++
T Consensus       297 ~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             HHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             HHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            36789999999999965  55789999 9999999999977 56789999864

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=6.3e-53  Score=381.23  Aligned_cols=307  Identities=23%  Similarity=0.331  Sum_probs=267.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++.            +.++++|.|+ |+++||+|||.++++|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus        24 mkA~v~~~~~~------------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~p~v~G~e~~G~V~   88 (370)
T 4ej6_A           24 MKAVRLESVGN------------ISVRNVGIPE-PGPDDLLVKVEACGICGTDRHLLHGEFP--STPPVTLGHEFCGIVV   88 (370)
T ss_dssp             EEEEEEEETTE------------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSEECCCSEEEEEE
T ss_pred             eEEEEEecCCc------------eEEEEccCCC-CCCCeEEEEEEEEeecHHHHHHHcCCCC--CCCCeecCcceEEEEE
Confidence            89999998874            4447899999 5999999999999999999999998763  4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe---------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049           81 AVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA  133 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~  133 (347)
                      ++|+++++|++||||++.                           ..+|+|+||++++++.++++|+++++++|| ++.+
T Consensus        89 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~  167 (370)
T 4ej6_A           89 EAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEP  167 (370)
T ss_dssp             EECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHH
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhH
Confidence            999999999999999862                           246999999999999999999999999998 7789


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      +.+||+++ ..+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++++|+++.++   .+.
T Consensus       168 ~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~---~~~  242 (370)
T 4ej6_A          168 LACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDV---VEA  242 (370)
T ss_dssp             HHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCH---HHH
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCH---HHH
Confidence            99999998 7899999999999998 9999999999999999 8999999999999999999999999988877   555


Q ss_pred             HHH---HhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEeccccccCchh
Q 019049          213 FLK---ARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRPHV  287 (347)
Q Consensus       213 ~~~---~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (347)
                      +.+   .+++ ++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.+++++.|++...        
T Consensus       243 i~~~~~~~~g-g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--------  313 (370)
T 4ej6_A          243 IAGPVGLVPG-GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP--------  313 (370)
T ss_dssp             HHSTTSSSTT-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT--------
T ss_pred             HHhhhhccCC-CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh--------
Confidence            555   5555 99999999996 5789999999999999999876643 33466677889999999976533        


Q ss_pred             HHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCC-cceeEEEEeCC
Q 019049          288 LEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRK-VIGKVMIAFDD  339 (347)
Q Consensus       288 ~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  339 (347)
                        ..++++++++.+|++++  .++++|+|+++++||+.+.+++ ..+|+++++++
T Consensus       314 --~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          314 --FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             --TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             --HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence              33788999999999964  5889999999999999998876 45788887743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=9.5e-53  Score=389.91  Aligned_cols=330  Identities=25%  Similarity=0.335  Sum_probs=274.2

Q ss_pred             CceEEecccCCCCc---cccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh----------------ccC
Q 019049            1 MEALVCRKLGDPTV---SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL----------------GKY   61 (347)
Q Consensus         1 m~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~----------------g~~   61 (347)
                      |||+++.+++.-..   ...++.+. +.++++|.|+ |+++||+|||.+++||++|++...                +.+
T Consensus        25 mkA~v~~~~~~~~~~~~~~~~~~~~-l~~~e~p~P~-~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~  102 (447)
T 4a0s_A           25 YLALHLRAEDADMFKGVADKDVRKS-LRLGEVPMPE-LAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGW  102 (447)
T ss_dssp             EEEEEEEGGGTTTTTTCSSCCHHHH-CEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGG
T ss_pred             heeeeeeccccccccccccCCCCCC-ceEEeccCCC-CCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCcc
Confidence            89999999881100   01111122 3446899999 599999999999999999985431                222


Q ss_pred             CCCCCCC-cccCCceeEEEEEeCCCCCCCCCCCEEEEecC---------------------------CCcceeeEeeeCC
Q 019049           62 QEKPPLP-FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAA---------------------------LGSFAQFIVADQS  113 (347)
Q Consensus        62 ~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------------~g~~~~~~~~~~~  113 (347)
                      ..+..+| .++|||++|+|+++|++|++|++||||++...                           .|+|+||++++++
T Consensus       103 ~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~  182 (447)
T 4a0s_A          103 ATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRAS  182 (447)
T ss_dssp             GGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGG
T ss_pred             ccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHH
Confidence            2223456 69999999999999999999999999987531                           4999999999999


Q ss_pred             CeeeCCCCCCHHHHccCcchHHHHHHHHHH--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049          114 ELFPVPKGCDLLAAAALPVAFGTSHVALVH--RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  191 (347)
Q Consensus       114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~  191 (347)
                      .++++|+++++++||+++.+++|||+++..  .+++++|++|||+|++|++|++++|+|+..|++|++++++++|+++++
T Consensus       183 ~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~  262 (447)
T 4a0s_A          183 QLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR  262 (447)
T ss_dssp             GEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             HcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            999999999999999999999999999864  388999999999999999999999999999999999999999999999


Q ss_pred             hcCCcEEEeCCCCCch---------------hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC
Q 019049          192 SLGVDHVVDLSNESVI---------------PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       192 ~~g~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      ++|+++++++.+.++.               ...+.+.+.+ +.++|++|||+|.+.+..++.+++++|+++.+|...+.
T Consensus       263 ~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~  341 (447)
T 4a0s_A          263 ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGY  341 (447)
T ss_dssp             HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCS
T ss_pred             hcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCc
Confidence            9999999986654321               1145566666 77999999999998889999999999999999877654


Q ss_pred             CCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049          257 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  336 (347)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~  336 (347)
                      ...++...++.+++++.++....         .+.+.++++++.+|++++.++++|+++++++||+.+.+++..||+|+.
T Consensus       342 ~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~  412 (447)
T 4a0s_A          342 LHTFDNRYLWMKLKKIVGSHGAN---------HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVL  412 (447)
T ss_dssp             EEEEEHHHHHHTTCEEEECCSCC---------HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEE
T ss_pred             ccccCHHHHHhCCCEEEecCCCC---------HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEE
Confidence            44456667888999999877554         356778999999999999999999999999999999999999999999


Q ss_pred             eCCCCC
Q 019049          337 FDDMKS  342 (347)
Q Consensus       337 ~~~~~~  342 (347)
                      +.+++.
T Consensus       413 ~~~~~~  418 (447)
T 4a0s_A          413 CMAPEQ  418 (447)
T ss_dssp             SSCCST
T ss_pred             eCCCCC
Confidence            865543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-51  Score=370.92  Aligned_cols=309  Identities=22%  Similarity=0.273  Sum_probs=265.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhcc-CC-CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-YQ-EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~-~~-~~~~~p~~~G~e~~G~   78 (347)
                      |||+++.+++.            +.+++.|.|+ |+++||+|||.++++|++|++.+.+. +. ....+|.++|||++|+
T Consensus         5 mka~~~~~~~~------------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~   71 (352)
T 1e3j_A            5 NLSAVLYKQND------------LRLEQRPIPE-PKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGT   71 (352)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CEEEEEEcCCc------------EEEEEecCCC-CCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEE
Confidence            89999998664            3346899999 59999999999999999999988743 32 1235789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccC
Q 019049           79 VDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAAL  130 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  130 (347)
                      |+++|++|++|++||||++..                            .+|+|+||++++++.++++|+++++++||.+
T Consensus        72 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  151 (352)
T 1e3j_A           72 VVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL  151 (352)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH
T ss_pred             EEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh
Confidence            999999999999999998641                            3699999999999999999999999999865


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhh
Q 019049          131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPS  209 (347)
Q Consensus       131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~  209 (347)
                       .++.|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|+++++++++ .++   
T Consensus       152 -~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~---  225 (352)
T 1e3j_A          152 -EPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEE---  225 (352)
T ss_dssp             -HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSC---
T ss_pred             -chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccH---
Confidence             6889999999 7889999999999998 99999999999999999999999999999999999999999885 666   


Q ss_pred             HHHHHHHhc---CCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049          210 VKEFLKARK---LKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  285 (347)
Q Consensus       210 ~~~~~~~~~---~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
                      .+.+.+.++   +.++|++|||+|.+ .+..++++++++|+++.+|..... ..++...++.+++++.++...       
T Consensus       226 ~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~-------  297 (352)
T 1e3j_A          226 ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-VTVPLVNACAREIDIKSVFRY-------  297 (352)
T ss_dssp             HHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-CCCCHHHHHTTTCEEEECCSC-------
T ss_pred             HHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ccccHHHHHhcCcEEEEeccc-------
Confidence            566666665   67899999999985 678999999999999999875432 235566788999999986532       


Q ss_pred             hhHHHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCC-cceeEEEEeCC
Q 019049          286 HVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRK-VIGKVMIAFDD  339 (347)
Q Consensus       286 ~~~~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~  339 (347)
                         .+.++++++++.+|+++  +.++++|+++++++||+.+.+++ ..||+|+++++
T Consensus       298 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          298 ---CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             ---SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             ---hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence               13478899999999976  45789999999999999999988 68999999863

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=5.5e-52  Score=373.74  Aligned_cols=313  Identities=20%  Similarity=0.283  Sum_probs=265.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC-C-CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-Q-EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~-~-~~~~~p~~~G~e~~G~   78 (347)
                      |||+++.+++.            +.+++.|.|+ |+++||+|||.++++|++|++.+.+.. . ....+|.++|||++|+
T Consensus         8 mka~~~~~~~~------------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   74 (356)
T 1pl8_A            8 NLSLVVHGPGD------------LRLENYPIPE-PGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT   74 (356)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEE
T ss_pred             ceEEEEecCCc------------EEEEEccCCC-CCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEE
Confidence            89999988663            3346899998 599999999999999999999988532 1 1135689999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccC
Q 019049           79 VDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAAL  130 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  130 (347)
                      |+++|++|++|++||||++.                            ..+|+|+||++++++.++++|+++++++||.+
T Consensus        75 V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~  154 (356)
T 1pl8_A           75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI  154 (356)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh
Confidence            99999999999999999864                            13699999999999999999999999999865


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049          131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  209 (347)
Q Consensus       131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (347)
                       .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|++++++++..+..+.
T Consensus       155 -~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  231 (356)
T 1pl8_A          155 -EPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEI  231 (356)
T ss_dssp             -HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHH
T ss_pred             -chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchH
Confidence             6889999999 7889999999999997 9999999999999999 9999999999999999999999999873111122


Q ss_pred             HHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhH
Q 019049          210 VKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL  288 (347)
Q Consensus       210 ~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      .+.+.+.++ .++|++|||+|.+ .+..++++++++|+++.+|..... ..++...++.+++++.++...          
T Consensus       232 ~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~----------  299 (356)
T 1pl8_A          232 ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEM-TTVPLLHAAIREVDIKGVFRY----------  299 (356)
T ss_dssp             HHHHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSC-CCCCHHHHHHTTCEEEECCSC----------
T ss_pred             HHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCC-CccCHHHHHhcceEEEEeccc----------
Confidence            556666676 7899999999985 678999999999999999874432 235666788999999987532          


Q ss_pred             HHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCCC
Q 019049          289 EDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKS  342 (347)
Q Consensus       289 ~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~~  342 (347)
                      .+.++++++++.+|+++  +.++++|+++++++||+.+.++ ..||+|+++++++.
T Consensus       300 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~~~  354 (356)
T 1pl8_A          300 CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPSDQ  354 (356)
T ss_dssp             SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTTCC
T ss_pred             HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCCCC
Confidence            13478899999999976  4578999999999999999988 88999999987663

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3e-52  Score=376.45  Aligned_cols=306  Identities=22%  Similarity=0.278  Sum_probs=260.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||+++..++++.           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        23 ~~a~~~~~~~~~-----------l~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   89 (369)
T 1uuf_A           23 IKAVGAYSAKQP-----------LEPMDITRRE-PGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVV   89 (369)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEE
T ss_pred             EEEEEEcCCCCC-----------cEEEEecCCC-CCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEE
Confidence            788887666543           4456899999 59999999999999999999999986543 3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe------------------------------------cCCCcceeeEeeeCCCeeeCCCC-CC
Q 019049           81 AVGPNVSNFKVGDTVCGF------------------------------------AALGSFAQFIVADQSELFPVPKG-CD  123 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~~~~~~~~~p~~-~~  123 (347)
                      ++|++|++|++||||+..                                    ..+|+|+||++++++.++++|++ ++
T Consensus        90 ~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls  169 (369)
T 1uuf_A           90 AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQ  169 (369)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGG
T ss_pred             EECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCC
Confidence            999999999999999842                                    13599999999999999999999 99


Q ss_pred             HHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC
Q 019049          124 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN  203 (347)
Q Consensus       124 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~  203 (347)
                      +++||++++++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|+++++++.+
T Consensus       170 ~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  247 (369)
T 1uuf_A          170 LAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRN  247 (369)
T ss_dssp             HHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             HHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEecccc
Confidence            99999999999999999964 68999999999998 99999999999999999999999999999999999999999875


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  282 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      .++   .++   ..  .++|++|||+|.+ .+..++++++++|+++.+|........++...++.+++++.+++...   
T Consensus       248 ~~~---~~~---~~--~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---  316 (369)
T 1uuf_A          248 ADE---MAA---HL--KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG---  316 (369)
T ss_dssp             HHH---HHT---TT--TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC---
T ss_pred             HHH---HHH---hh--cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCC---
Confidence            432   221   12  5899999999985 68999999999999999987654332355566788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                            .+.++++++++.+|++++.+. .|+++++++||+.+.+++..||+|+++++
T Consensus       317 ------~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          317 ------IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             ------HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             ------HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence                  367889999999999997764 79999999999999998888999999865

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.2e-51  Score=372.03  Aligned_cols=317  Identities=28%  Similarity=0.389  Sum_probs=271.1

Q ss_pred             CceEEecccCCC--CccccCCCCceeee-ccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeE
Q 019049            1 MEALVCRKLGDP--TVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG   77 (347)
Q Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G   77 (347)
                      |||+++.++|.+  +.         +.+ +++|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|
T Consensus        24 MkA~~~~~~g~~~~~~---------l~~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G   93 (362)
T 2c0c_A           24 MQKLVVTRLSPNFREA---------VTLSRDCPVPL-PGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIG   93 (362)
T ss_dssp             EEEEEECSCCSSHHHH---------EEEEEEEECCC-CCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEE
T ss_pred             ceEEEEeecCCCccce---------eEEEeecCCCC-CCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEE
Confidence            899999998853  11         344 6899999 5999999999999999999999998765445679999999999


Q ss_pred             EEEEeCCCCC-CCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049           78 TVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus        78 ~V~~vG~~v~-~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      +|+++|++|+ +|++||||+++. +|+|+||++++++.++++|+. + .++|+++.+++|||+++.+.+++++|++|||+
T Consensus        94 ~V~~vG~~V~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~  170 (362)
T 2c0c_A           94 EVVALGLSASARYTVGQAVAYMA-PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVT  170 (362)
T ss_dssp             EEEEECTTGGGTCCTTCEEEEEC-SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEET
T ss_pred             EEEEECCCccCCCCCCCEEEEcc-CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEe
Confidence            9999999999 999999999986 599999999999999999996 4 46777889999999999888899999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHH
Q 019049          157 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE  236 (347)
Q Consensus       157 g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  236 (347)
                      |++|++|++++|+|+..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+ +.++|++|||+|...+..
T Consensus       171 Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~~~~~~~~-~~g~D~vid~~g~~~~~~  246 (362)
T 2c0c_A          171 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPV---GTVLKQEY-PEGVDVVYESVGGAMFDL  246 (362)
T ss_dssp             TTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHC-TTCEEEEEECSCTHHHHH
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhH---HHHHHHhc-CCCCCEEEECCCHHHHHH
Confidence            98899999999999999999999999999999999999999999887766   44444444 568999999999988899


Q ss_pred             HHhccccCCEEEEEeecCCCCC----------CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049          237 SLKLLNWGAQILVIGFASGEIP----------VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                      ++++++++|+++.+|.......          .+ ...++.+++++.+++...+.    ....+.++++++++.+|++++
T Consensus       247 ~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~----~~~~~~~~~~~~l~~~g~l~~  321 (362)
T 2c0c_A          247 AVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYL----SKYQAAMSHLLEMCVSGDLVC  321 (362)
T ss_dssp             HHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCG----GGHHHHHHHHHHHHHTTCSCC
T ss_pred             HHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhh----hhHHHHHHHHHHHHHCCCeEe
Confidence            9999999999999987643210          11 24567889999987654432    223578899999999999997


Q ss_pred             eec--------eeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          307 HIS--------HTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       307 ~~~--------~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      .+.        +.++++++++||+.+.+++..||+|+++++
T Consensus       322 ~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          322 EVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             CEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             eeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            643        668999999999999998889999998753

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.8e-52  Score=375.23  Aligned_cols=304  Identities=25%  Similarity=0.351  Sum_probs=246.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-CCCCCcccCCceeEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTV   79 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V   79 (347)
                      |||+++.++|.+           +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++. ...+|.++|||++|+|
T Consensus         4 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V   71 (344)
T 2h6e_A            4 SKAALLKKFSEP-----------LSIEDVNIPE-PQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTI   71 (344)
T ss_dssp             EEBCEECSCCC----------------EEEECC-CCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEE
T ss_pred             eEEEEEecCCCC-----------CeEEEeeCCC-CCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEE
Confidence            899999998753           3346889999 59999999999999999999999987642 2357999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeee-CCCeeeCCCCCCHHHHccCc
Q 019049           80 DAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVAD-QSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~l~  131 (347)
                      +++|++ ++|++||||+++.                           .+|+|+||++++ ++.++++ +++++++||.++
T Consensus        72 ~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~  149 (344)
T 2h6e_A           72 VEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLA  149 (344)
T ss_dssp             EEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGG
T ss_pred             EEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhh
Confidence            999999 9999999998752                           369999999999 9999999 999999999999


Q ss_pred             chHHHHHHHHHHh----cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCcEEEeCCC-C
Q 019049          132 VAFGTSHVALVHR----AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSN-E  204 (347)
Q Consensus       132 ~~~~~a~~~l~~~----~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~  204 (347)
                      +++.|||+++...    +++ +|++|||+|+ |++|++++|+|+.+  |++|++++++++|+++++++|+++++++.+ .
T Consensus       150 ~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~  227 (344)
T 2h6e_A          150 DAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAE  227 (344)
T ss_dssp             THHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHH
T ss_pred             hhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccch
Confidence            9999999999654    288 9999999999 99999999999999  999999999999999999999999987653 2


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  283 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
                      ++      ..+.+.+.++|++|||+|.+ .+..++++++++|+++.+|...... .++...++.+++++.+++...    
T Consensus       228 ~~------~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~----  296 (344)
T 2h6e_A          228 SL------INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRV-SLEAFDTAVWNKKLLGSNYGS----  296 (344)
T ss_dssp             HH------HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCC-CCCHHHHHHTTCEEEECCSCC----
T ss_pred             HH------HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCc-ccCHHHHhhCCcEEEEEecCC----
Confidence            21      23345556899999999986 7899999999999999998765432 355566788999999876443    


Q ss_pred             CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                           .+.++++++++.+|++++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus       297 -----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          297 -----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             -----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             -----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence                 47789999999999999888 9999999999999999988889999863

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4.2e-51  Score=367.95  Aligned_cols=308  Identities=22%  Similarity=0.287  Sum_probs=261.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||+..+..++.++.         +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         8 m~~~a~~~~~~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   76 (357)
T 2cf5_A            8 RKTTGWAARDPSGI---------LSPYTYTLRE-TGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVV   76 (357)
T ss_dssp             CEEEEEEECSTTCC---------EEEEEEECCC-CCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEE
T ss_pred             ceeEEEEEccCCCC---------cEEEEecCCC-CCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEE
Confidence            45555554554432         4456899999 59999999999999999999999886542 4579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049           81 AVGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQSELFPVPKGCDLL  125 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  125 (347)
                      ++|++|++|++||||+..                                   ..+|+|+||++++++.++++|++++++
T Consensus        77 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~  156 (357)
T 2cf5_A           77 EVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVE  156 (357)
T ss_dssp             EECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHH
T ss_pred             EECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHH
Confidence            999999999999999742                                   146999999999999999999999999


Q ss_pred             HHccCcchHHHHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCC
Q 019049          126 AAAALPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSN  203 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~-~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~  203 (347)
                      +||++++++.|||+++. .++++ +|++|||+|+ |++|++++|+|+.+|++|++++++++|++.++ ++|+++++++.+
T Consensus       157 ~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~  234 (357)
T 2cf5_A          157 QAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSD  234 (357)
T ss_dssp             HHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTC
T ss_pred             HhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeecccc
Confidence            99999999999999985 57888 9999999997 99999999999999999999999999999988 899999998765


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  282 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      .      +.+.+.+  .++|++|||+|.+ .+..++++++++|+++.+|........++.. ++.+++++.+++...   
T Consensus       235 ~------~~~~~~~--~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~---  302 (357)
T 2cf5_A          235 Q------AKMSELA--DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGS---  302 (357)
T ss_dssp             H------HHHHHST--TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCC---
T ss_pred             H------HHHHHhc--CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCC---
Confidence            2      2333333  3799999999975 7899999999999999998765443324445 788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCC
Q 019049          283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                            .+.++++++++.+|++++.+ ++|+++++++||+.+.+++..||+|++++++
T Consensus       303 ------~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  353 (357)
T 2cf5_A          303 ------MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEGS  353 (357)
T ss_dssp             ------HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTSC
T ss_pred             ------HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCcc
Confidence                  46788999999999999776 6999999999999999999899999998653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=8.5e-52  Score=373.76  Aligned_cols=310  Identities=21%  Similarity=0.225  Sum_probs=264.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCC--------CCCCCCeEEEEEEEecCChhhHHHHhccC--CCCCCCCcc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIP--------QLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFV   70 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~eV~i~v~~~~i~~~d~~~~~g~~--~~~~~~p~~   70 (347)
                      |||+++.+++.            +.++++|.|        + |+++||+|||.++++|++|++.+.+..  .....+|.+
T Consensus         9 mka~~~~~~~~------------l~~~~~~~P~~~~~~~~~-~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v   75 (363)
T 3m6i_A            9 NIGVFTNPQHD------------LWISEASPSLESVQKGEE-LKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHV   75 (363)
T ss_dssp             CEEEEECTTCC------------EEEEECSSCHHHHHHTCS-CCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEE
T ss_pred             ceeEEEeCCCc------------EEEEEecCCccccccCCC-cCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcc
Confidence            89999987665            344689999        8 599999999999999999999987542  122467999


Q ss_pred             cCCceeEEEEEeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCC
Q 019049           71 PGSDYSGTVDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGC  122 (347)
Q Consensus        71 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~  122 (347)
                      +|||++|+|+++|++|++|++||||++.                            ..+|+|+||++++++.++++|+ +
T Consensus        76 ~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~  154 (363)
T 3m6i_A           76 LGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-M  154 (363)
T ss_dssp             CCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-C
T ss_pred             cCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-C
Confidence            9999999999999999999999999874                            1469999999999999999999 9


Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++||++ .++.|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|++ |++++++++|+++++++ ++.++++
T Consensus       155 s~~~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~  230 (363)
T 3m6i_A          155 SYENGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTH  230 (363)
T ss_dssp             CHHHHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEE
T ss_pred             CHHHHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccc
Confidence            99999987 6889999999 7899999999999998 99999999999999997 99999999999999999 6666654


Q ss_pred             CC--CCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEec
Q 019049          202 SN--ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       202 ~~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      ..  .+..+..+.+.+.+++.++|++|||+|++ .+..++++++++|+++.+|...... .++...++.+++++.++...
T Consensus       231 ~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          231 KVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEI-QIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             ECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCC-CCCHHHHHHHTCEEEECCSC
T ss_pred             cccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCc-cccHHHHHhcCcEEEEccCC
Confidence            32  12223366777888888999999999986 6799999999999999998765443 35667788999999987643


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcC-CcceeEEEEeCC
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDR-KVIGKVMIAFDD  339 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~~~  339 (347)
                                .+.++++++++.+|+++  +.++++|+++++++||+.+.++ ...+|+|++.++
T Consensus       310 ----------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 ----------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             ----------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             ----------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence                      14578899999999995  4588999999999999999987 677899998763

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=8.1e-52  Score=378.45  Aligned_cols=325  Identities=22%  Similarity=0.334  Sum_probs=272.5

Q ss_pred             CceEEecccCCCCcccc----CCCC------------ceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC---
Q 019049            1 MEALVCRKLGDPTVSIH----DEKS------------PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY---   61 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~----~~~~------------~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~---   61 (347)
                      |||+++++++.|+..+.    +..+            .-+.++++|.|++|+++||+|||.++++|++|++.+.|..   
T Consensus         3 m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~   82 (404)
T 3ip1_A            3 LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGY   82 (404)
T ss_dssp             EEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSB
T ss_pred             ceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcc
Confidence            89999999998872111    0011            1234568999984599999999999999999999998642   


Q ss_pred             ---CCCCCCCcccCCceeEEEEEeCCCC------CCCCCCCEEEEe---------------------------cCCCcce
Q 019049           62 ---QEKPPLPFVPGSDYSGTVDAVGPNV------SNFKVGDTVCGF---------------------------AALGSFA  105 (347)
Q Consensus        62 ---~~~~~~p~~~G~e~~G~V~~vG~~v------~~~~~Gd~V~~~---------------------------~~~g~~~  105 (347)
                         +....+|.++|||++|+|+++|++|      ++|++||||++.                           ..+|+|+
T Consensus        83 ~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~a  162 (404)
T 3ip1_A           83 ILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFA  162 (404)
T ss_dssp             BSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSB
T ss_pred             ccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCc
Confidence               2223679999999999999999999      889999999873                           2469999


Q ss_pred             eeEeeeCCCeeeCCCCCC------HHHHccCcchHHHHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EE
Q 019049          106 QFIVADQSELFPVPKGCD------LLAAAALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TI  177 (347)
Q Consensus       106 ~~~~~~~~~~~~~p~~~~------~~~aa~l~~~~~~a~~~l~~~-~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V  177 (347)
                      ||++++++.++++|++++      ..++|+++.+++|||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  241 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKV  241 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            999999999999999885      566888999999999998644 48999999999998 9999999999999999 99


Q ss_pred             EEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc--chHHHHhcc----ccCCEEEEEe
Q 019049          178 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK--LTKESLKLL----NWGAQILVIG  251 (347)
Q Consensus       178 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l----~~~G~~v~~g  251 (347)
                      ++++++++|+++++++|+++++++++.++   .+.+.+.+++.++|++|||+|.+  .+..+++++    +++|+++.+|
T Consensus       242 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G  318 (404)
T 3ip1_A          242 ILSEPSEVRRNLAKELGADHVIDPTKENF---VEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA  318 (404)
T ss_dssp             EEECSCHHHHHHHHHHTCSEEECTTTSCH---HHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred             EEECCCHHHHHHHHHcCCCEEEcCCCCCH---HHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence            99999999999999999999999988887   77788888888999999999987  566666676    9999999999


Q ss_pred             ecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCc
Q 019049          252 FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV  329 (347)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~  329 (347)
                      ...... .++...++.+++++.|+.....        .+.++++++++.+| +++  .++++|+|+++++||+.+.    
T Consensus       319 ~~~~~~-~~~~~~~~~~~~~i~g~~~~~~--------~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----  384 (404)
T 3ip1_A          319 RADAKI-PLTGEVFQVRRAQIVGSQGHSG--------HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----  384 (404)
T ss_dssp             CCCSCE-EECHHHHHHTTCEEEECCCCCS--------TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----
T ss_pred             CCCCCC-cccHHHHhccceEEEEecCCCc--------hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----
Confidence            776543 4566778899999998764321        25678999999999 764  5889999999999999887    


Q ss_pred             ceeEEEEeCCCCCc
Q 019049          330 IGKVMIAFDDMKSI  343 (347)
Q Consensus       330 ~gk~vv~~~~~~~~  343 (347)
                      .||+|+++++++..
T Consensus       385 ~GKvvl~~~~~~~~  398 (404)
T 3ip1_A          385 TDKSLVKVTMLNEG  398 (404)
T ss_dssp             TCTTCSCEEEECC-
T ss_pred             CCcEEEecCCCCCc
Confidence            67999888666543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.8e-51  Score=362.39  Aligned_cols=298  Identities=31%  Similarity=0.479  Sum_probs=256.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++           .+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~~-----------~l~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPL-----------ELVDLPEPE-AEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE   68 (302)
T ss_dssp             CEEEEECSTTSCE-----------EEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET
T ss_pred             CeEEEEcCCCCch-----------heEECCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE
Confidence            9999999999873           223888999 5999999999999999999999998766544679999999999997


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                                 ||||+++..+|+|+||++++++.++++|+++++++||+++++++|||+++...+ +++|++|||+|++|
T Consensus        69 -----------GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G  136 (302)
T 1iz0_A           69 -----------GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAG  136 (302)
T ss_dssp             -----------TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTB
T ss_pred             -----------CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCc
Confidence                       999999987899999999999999999999999999999999999999997677 99999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  239 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  239 (347)
                      ++|++++|+++..|++|+++++++++++.++++|+++++++++ .++   .+.+      .++|++|| +|.+.+..+++
T Consensus       137 ~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~---~~~~------~~~d~vid-~g~~~~~~~~~  206 (302)
T 1iz0_A          137 ALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPER---AKAW------GGLDLVLE-VRGKEVEESLG  206 (302)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHH---HHHT------TSEEEEEE-CSCTTHHHHHT
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhH---HHHh------cCceEEEE-CCHHHHHHHHH
Confidence            9999999999999999999999999999999999999998764 333   2222      58999999 99888899999


Q ss_pred             ccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHH---HHHcCceeeeeceeeChhh
Q 019049          240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL---WAAKGLITIHISHTYSPSE  316 (347)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~g~l~~~~~~~~~~~~  316 (347)
                      +++++|+++.+|........++...++.+++++.++....+     ....+.++++++   ++.+|++++.++++|++++
T Consensus       207 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~  281 (302)
T 1iz0_A          207 LLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL-----LREGALVEEALGFLLPRLGRELRPVVGPVFPFAE  281 (302)
T ss_dssp             TEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHH-----TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGG
T ss_pred             hhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccch-----hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHH
Confidence            99999999999876554334555667899999999875433     112467888888   9999999988999999999


Q ss_pred             HHHHHHHHHcCCcceeEEEEe
Q 019049          317 ANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       317 ~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +++||+.+.+++..||+|+++
T Consensus       282 ~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          282 AEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999888889999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.9e-50  Score=360.09  Aligned_cols=312  Identities=23%  Similarity=0.306  Sum_probs=268.5

Q ss_pred             CceEEecc--cC--CCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCc--
Q 019049            1 MEALVCRK--LG--DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD--   74 (347)
Q Consensus         1 m~a~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e--   74 (347)
                      ||||++++  +|  .++.         +.++++|.|+ |+++||+|||.++++|++|++.+.+...  ..+|.++|||  
T Consensus         8 mka~v~~~~~~g~~~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~d~~~~~~~~~--~~~p~~~G~e~g   75 (336)
T 4b7c_A            8 NRQYQLAQRPSGLPGRDT---------FSFVETPLGE-PAEGQILVKNEYLSLDPAMRGWMNDARS--YIPPVGIGEVMR   75 (336)
T ss_dssp             EEEEEECSCCSSSCCTTS---------EEEEEEECCC-CCTTCEEEEEEEEECCTHHHHHHSCSCC--SSCCCCTTSBCC
T ss_pred             ccEEEEEecCCCCCCCCc---------eEEEeccCCC-CCCCEEEEEEEEEEeCHHHHhhhhcccc--cCCCCCCCcccC
Confidence            89999986  33  2322         4557899999 6999999999999999999998876432  2346677777  


Q ss_pred             --eeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHH--ccCcchHHHHHHHHHHhcCCCCC
Q 019049           75 --YSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAA--AALPVAFGTSHVALVHRAQLSSG  150 (347)
Q Consensus        75 --~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a--a~l~~~~~~a~~~l~~~~~~~~~  150 (347)
                        ++|+|++.  ++++|++||||++.   |+|+||++++++.++++|+++++.++  |+++++++|||+++.+.+++++|
T Consensus        76 ~~~~G~V~~~--~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g  150 (336)
T 4b7c_A           76 ALGVGKVLVS--KHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNG  150 (336)
T ss_dssp             CEEEEEEEEE--CSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTT
T ss_pred             CceEEEEEec--CCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCC
Confidence              79999994  58899999999985   89999999999999999999977776  78999999999999889999999


Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ++|||+|++|++|++++|+++..|++|+++++++++++.+ +++|+++++|+.+.++   .+.+.+.+ ++++|++|||+
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~d~vi~~~  226 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDL---AAGLKREC-PKGIDVFFDNV  226 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCH---HHHHHHHC-TTCEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHH---HHHHHHhc-CCCceEEEECC
Confidence            9999999999999999999999999999999999999999 8999999999988877   56666666 46899999999


Q ss_pred             CccchHHHHhccccCCEEEEEeecCC----C--CCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCc
Q 019049          230 GGKLTKESLKLLNWGAQILVIGFASG----E--IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~~g~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      |.+.+..++++++++|+++.+|....    .  ...++...++.+++++.++....+.    ....+.++++++++.+|+
T Consensus       227 g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~----~~~~~~~~~~~~l~~~g~  302 (336)
T 4b7c_A          227 GGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYA----QRFPEGLKEMATWLAEGK  302 (336)
T ss_dssp             CHHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGG----GGHHHHHHHHHHHHHTTS
T ss_pred             CcchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhh----hhhHHHHHHHHHHHHCCC
Confidence            99888999999999999999987652    1  1234556678999999998765543    224578999999999999


Q ss_pred             eeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          304 ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       304 l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      +++.+..+++++++++||+.+.+++..||+|+++
T Consensus       303 l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          303 LQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             SCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9998888899999999999999999999999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=2.1e-50  Score=363.78  Aligned_cols=319  Identities=23%  Similarity=0.332  Sum_probs=271.0

Q ss_pred             CceEEe-ccc---CCC--CccccCCCCceeeeccccCCCCC-CCCeEEEEEEEecCChhhHHHHhc----cCCCCCCCCc
Q 019049            1 MEALVC-RKL---GDP--TVSIHDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILG----KYQEKPPLPF   69 (347)
Q Consensus         1 m~a~~~-~~~---~~~--~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~i~v~~~~i~~~d~~~~~g----~~~~~~~~p~   69 (347)
                      |||+++ .++   |.|  +.         +.+++.|.|+ | +++||+|||.++++|++|++.+.+    .+..+..+|.
T Consensus         9 mka~v~~~~~~~~g~p~~~~---------l~~~~~~~P~-~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~   78 (357)
T 2zb4_A            9 VQRVVLNSRPGKNGNPVAEN---------FRMEEVYLPD-NINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQ   78 (357)
T ss_dssp             EEEEEECCCCCTTSCCCGGG---------EEEEEEECCS-CCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTS
T ss_pred             ceEEEEeccCCCCCCCCcCc---------eEEEeecCCC-CCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCc
Confidence            899999 566   544  32         4456899998 7 899999999999999999988775    2322345788


Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCC-----CHHHHccCcchHHHHHHHHHHh
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGC-----DLLAAAALPVAFGTSHVALVHR  144 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~-----~~~~aa~l~~~~~~a~~~l~~~  144 (347)
                      ++|||++|+|++  +++++|++||||++..  |+|+||++++++.++++|+++     +++ +|+++++++|||+++.+.
T Consensus        79 v~G~E~~G~V~~--~~v~~~~vGdrV~~~~--G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~  153 (357)
T 2zb4_A           79 VVDGGGIGIIEE--SKHTNLTKGDFVTSFY--WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEK  153 (357)
T ss_dssp             BCEEEEEEEEEE--ECSTTCCTTCEEEEEE--EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHH
T ss_pred             cccccEEEEEEe--cCCCCCCCCCEEEecC--CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHh
Confidence            999999999999  8899999999999875  899999999999999999999     555 778899999999999888


Q ss_pred             cCCCCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          145 AQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       145 ~~~~~~--~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      +++++|  ++|||+|++|++|++++|+++..|+ +|+++++++++++.+++ +|++.++|+.+.++   .+.+.+.+.+ 
T Consensus       154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~---~~~~~~~~~~-  229 (357)
T 2zb4_A          154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNV---AEQLRESCPA-  229 (357)
T ss_dssp             SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCH---HHHHHHHCTT-
T ss_pred             cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHH---HHHHHHhcCC-
Confidence            999999  9999999999999999999999999 99999999999999886 99999999887766   5566666665 


Q ss_pred             cccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcc---------hhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049          221 GVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP---------ANIALVKNWTVHGLYWGSYKIHRPHVLEDS  291 (347)
Q Consensus       221 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      ++|++|||+|...+..++++++++|+++.+|.........+         ...++.+++++.++....+    +....+.
T Consensus       230 ~~d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~  305 (357)
T 2zb4_A          230 GVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNY----KDKFEPG  305 (357)
T ss_dssp             CEEEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGG----GGGHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhh----hHHHHHH
Confidence            89999999999888999999999999999987653211121         1457789999998765432    2334678


Q ss_pred             HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCCC
Q 019049          292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKS  342 (347)
Q Consensus       292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~~  342 (347)
                      ++++++++.+|++++.+..+|+++++++||+.+.+++..||+|++++++.+
T Consensus       306 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~~  356 (357)
T 2zb4_A          306 ILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEIS  356 (357)
T ss_dssp             HHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecccc
Confidence            999999999999998877789999999999999999888999999977654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.1e-50  Score=367.66  Aligned_cols=314  Identities=26%  Similarity=0.322  Sum_probs=257.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--------------CCCC
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--------------EKPP   66 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--------------~~~~   66 (347)
                      |||+++.++|.++.        +.+.+++|.|++|+++||+|||.++++|++|++.+.|..+              ....
T Consensus        22 mka~~~~~~g~~~~--------l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~   93 (375)
T 2vn8_A           22 SMAWVIDKYGKNEV--------LRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE   93 (375)
T ss_dssp             EEEEEBSSCCSGGG--------CEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTT
T ss_pred             ceeEEeccCCCccc--------eEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccccc
Confidence            89999999987643        3332678888834899999999999999999999987531              1123


Q ss_pred             CCcccCCceeEEEEEeCCCCCCCCCCCEEEEecC---CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHH
Q 019049           67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAA---LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH  143 (347)
Q Consensus        67 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~  143 (347)
                      +|.++|||++|+|+++|++|++|++||||++...   +|+|+||++++++.++++|+++++++||+++.+++|||+++..
T Consensus        94 ~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~  173 (375)
T 2vn8_A           94 FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINK  173 (375)
T ss_dssp             CSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTT
T ss_pred             CCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHH
Confidence            7899999999999999999999999999998753   6999999999999999999999999999999999999999977


Q ss_pred             hcC----CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcC
Q 019049          144 RAQ----LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       144 ~~~----~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      .++    +++|++|||+|++|++|++++|+|+..|++|++++ +++++++++++|++.++|+++.++   .+.+.+   .
T Consensus       174 ~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~---~~~~~~---~  246 (375)
T 2vn8_A          174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSV---EEQLKS---L  246 (375)
T ss_dssp             TTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCH---HHHHHT---S
T ss_pred             hcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHH---HHHHhh---c
Confidence            788    99999999999889999999999999999999998 578899999999999999987766   333332   2


Q ss_pred             CcccEEEeCCCccc--hHHHHhccccCCEEEEEeecCCC-CCC--cch------hHhhh-------cceEEEEEEecccc
Q 019049          220 KGVDVLYDPVGGKL--TKESLKLLNWGAQILVIGFASGE-IPV--IPA------NIALV-------KNWTVHGLYWGSYK  281 (347)
Q Consensus       220 ~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~-~~~--~~~------~~~~~-------~~~~~~~~~~~~~~  281 (347)
                      .++|++|||+|.+.  +..++++++++|+++.+|..... ...  .+.      ..++.       ++..+.....    
T Consensus       247 ~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----  322 (375)
T 2vn8_A          247 KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF----  322 (375)
T ss_dssp             CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC----
T ss_pred             CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEe----
Confidence            58999999999873  48899999999999999854321 000  000      01222       2333322111    


Q ss_pred             ccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          282 IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                        .+  ..+.++++++++.+|++++.++++|+++++++||+.+.+++..||+|+++
T Consensus       323 --~~--~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          323 --MA--SGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             --CC--CHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             --CC--CHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence              11  14678999999999999988999999999999999999998889999976

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.1e-51  Score=371.91  Aligned_cols=301  Identities=19%  Similarity=0.200  Sum_probs=259.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCC---CcccCCceeE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL---PFVPGSDYSG   77 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~---p~~~G~e~~G   77 (347)
                      |||+++.+++.+           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+   |.++|||++|
T Consensus         1 MkA~~~~~~~~~-----------l~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G   67 (357)
T 2b5w_A            1 MKAIAVKRGEDR-----------PVVIEKPRPE-PESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG   67 (357)
T ss_dssp             CEEEEEETTCSS-----------CEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE
T ss_pred             CeEEEEeCCCCc-----------eEEEECCCCC-CCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE
Confidence            999999998873           3346899999 59999999999999999999999987543 345   8999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEe--------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049           78 TVDAVGPNVSNFKVGDTVCGF--------------------------------AALGSFAQFIVADQSELFPVPKGCDLL  125 (347)
Q Consensus        78 ~V~~vG~~v~~~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  125 (347)
                       |+++|++ ++|++||||++.                                ..+|+|+||++++++.++++|++++ +
T Consensus        68 -V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~  144 (357)
T 2b5w_A           68 -VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E  144 (357)
T ss_dssp             -EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-T
T ss_pred             -EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-h
Confidence             9999999 999999999875                                1259999999999999999999999 5


Q ss_pred             HHccCcchHHHHHHHHHHhcCCCCC------CEEEEecCCchHHHHH-HHHH-HHcCCE-EEEEecChh---hHHHHHhc
Q 019049          126 AAAALPVAFGTSHVALVHRAQLSSG------QVLLVLGAAGGVGVAA-VQIG-KVCGAT-IIAVARGAE---KIKFLKSL  193 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~~~------~~VlI~g~~g~~G~~~-~~la-~~~g~~-V~~~~~~~~---~~~~~~~~  193 (347)
                       +|+++.+++|||+++ ..+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   |+++++++
T Consensus       145 -~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l  221 (357)
T 2b5w_A          145 -LGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL  221 (357)
T ss_dssp             -TGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT
T ss_pred             -hhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc
Confidence             455889999999999 67889999      99999999 9999999 9999 999997 999999998   99999999


Q ss_pred             CCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHh----hhc
Q 019049          194 GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIA----LVK  268 (347)
Q Consensus       194 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~  268 (347)
                      |++++ ++++.++   .+ +.+. .+ ++|++|||+|.+ .+..++++++++|+++.+|........++...+    +.+
T Consensus       222 Ga~~v-~~~~~~~---~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  294 (357)
T 2b5w_A          222 DATYV-DSRQTPV---ED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLH  294 (357)
T ss_dssp             TCEEE-ETTTSCG---GG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHT
T ss_pred             CCccc-CCCccCH---HH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhC
Confidence            99999 9887776   33 4444 45 999999999985 789999999999999999876632233555566    789


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcC--c-eeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG--L-ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~-l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      ++++.++....         .+.++++++++.+|  + +++.++++|+++++++||+.+   ...||+|+++++
T Consensus       295 ~~~i~g~~~~~---------~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          295 NKALVGSVNSH---------VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             TCEEEECCCCC---------HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             CeEEEEeccCC---------HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            99999876543         47889999999999  8 577788999999999999988   457899999854

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.3e-51  Score=364.97  Aligned_cols=316  Identities=23%  Similarity=0.294  Sum_probs=260.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         4 mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   73 (328)
T 1xa0_A            4 FQAFVVNKTETEFT---------AGVQTISMDD-LPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVV   73 (328)
T ss_dssp             EEEEEEEEETTEEE---------EEEEEEEGGG-SCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEE
T ss_pred             ceEEEEecCCCcce---------eEEEeccCCC-CCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEE
Confidence            89999999986422         4456899999 5999999999999999999999988765444679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHH--HhcCCCCCC-
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLSSGQ-  151 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~~~-  151 (347)
                      ++  ++++|++||||++..      .+|+|+||++++++.++++|+++++++||++++.+.|||.++.  ..+++++|+ 
T Consensus        74 ~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~  151 (328)
T 1xa0_A           74 SS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERG  151 (328)
T ss_dssp             EC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             ec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCc
Confidence            95  578899999999763      3699999999999999999999999999999999999998875  346788987 


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||+|++|++|++++|+|+..|++|++++++++++++++++|+++++|+.+.+     .+..+...+.++|++|||+|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-----~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-----AERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC--------------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-----HHHHHHhcCCcccEEEECCcH
Confidence            999999999999999999999999999999999999999999999999877532     111222334589999999999


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      +.+..++++++++|+++.+|...+.....+...++.+++++.++.....   ......+.++.+.+++.+| +++ +.++
T Consensus       227 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~g-l~~-~~~~  301 (328)
T 1xa0_A          227 RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYC---PMDLRLRIWERLAGDLKPD-LER-IAQE  301 (328)
T ss_dssp             TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSC---CHHHHHHHHHHHHTTTCCC-HHH-HEEE
T ss_pred             HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccC---CHHHHHHHHHHHHHHHHcC-Cce-eeeE
Confidence            8889999999999999999876543233444567789999998743211   1122345677888888888 766 4689


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAFD  338 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~~  338 (347)
                      |+++++++||+.+.+++..||+|++++
T Consensus       302 ~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          302 ISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             EEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             eCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            999999999999999988999999873

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.8e-50  Score=364.82  Aligned_cols=308  Identities=21%  Similarity=0.262  Sum_probs=263.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      ||+..+..++.++.         +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        15 mk~~~~~~~~~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   83 (366)
T 1yqd_A           15 VKAFGWAARDQSGH---------LSPFNFSRRA-TGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVT   83 (366)
T ss_dssp             EEEEEEEECSTTCC---------EEEEEEEECC-CCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEE
T ss_pred             eeEEEEEEcCCCCC---------cEEEEccCCC-CCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEE
Confidence            67777777766543         4456899999 59999999999999999999999886542 3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049           81 AVGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQSELFPVPKGCDLL  125 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~  125 (347)
                      ++|++|++|++||||+..                                   ..+|+|+||++++++.++++|+++|++
T Consensus        84 ~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~  163 (366)
T 1yqd_A           84 EVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLD  163 (366)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTT
T ss_pred             EECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHH
Confidence            999999999999999741                                   146999999999999999999999999


Q ss_pred             HHccCcchHHHHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCC
Q 019049          126 AAAALPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSN  203 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~-~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~  203 (347)
                      +||++++++.|||+++. ..++. +|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++|+.+
T Consensus       164 ~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~  241 (366)
T 1yqd_A          164 GGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRD  241 (366)
T ss_dssp             TTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTC
T ss_pred             HhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccC
Confidence            99999999999999985 46788 9999999997 99999999999999999999999999999887 899999998775


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  282 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (347)
                      .      +.+.+.+  +++|++|||+|.. .+..++++++++|+++.+|...... .++...++.+++++.+++...   
T Consensus       242 ~------~~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~---  309 (366)
T 1yqd_A          242 Q------EQMQAAA--GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPL-ELPAFSLIAGRKIVAGSGIGG---  309 (366)
T ss_dssp             H------HHHHHTT--TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCE-EECHHHHHTTTCEEEECCSCC---
T ss_pred             H------HHHHHhh--CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCC-CcCHHHHHhCCcEEEEecCCC---
Confidence            2      2333334  3899999999975 6899999999999999998765432 245566788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCC
Q 019049          283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                            .+.++++++++.+|++++.+ ++|+|+++++||+.+.+++..||+|++++++
T Consensus       310 ------~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~~  360 (366)
T 1yqd_A          310 ------MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGNT  360 (366)
T ss_dssp             ------HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHHH
T ss_pred             ------HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEcccc
Confidence                  46788999999999999876 6999999999999999998899999998653

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-50  Score=368.84  Aligned_cols=309  Identities=19%  Similarity=0.237  Sum_probs=262.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCC-CCe------EEEEEEEecCChhhHHHHhccCCCCCCCCcccCC
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STA------VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS   73 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~e------V~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~   73 (347)
                      |||+++.+++.            +.++++|.|+ |+ ++|      |+|||.+++||++|++.+.|.++  ..+|.++||
T Consensus         3 Mka~~~~~~~~------------l~~~~~p~P~-~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~p~v~Gh   67 (398)
T 1kol_A            3 NRGVVYLGSGK------------VEVQKIDYPK-MQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGH   67 (398)
T ss_dssp             EEEEEEEETTE------------EEEEEECCCC-SBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCC
T ss_pred             cEEEEEecCCc------------eEEEEecCCC-CCCCCcccccceEEEEEEEEeechhhHHHHcCCCC--CCCCcccCc
Confidence            89999988763            3346899998 56 888      99999999999999999988653  356899999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEe-------------------------------------cCCCcceeeEeeeCC--C
Q 019049           74 DYSGTVDAVGPNVSNFKVGDTVCGF-------------------------------------AALGSFAQFIVADQS--E  114 (347)
Q Consensus        74 e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~~--~  114 (347)
                      |++|+|+++|++|++|++||||+..                                     ..+|+|+||++++++  .
T Consensus        68 E~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (398)
T 1kol_A           68 EITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN  147 (398)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH
T ss_pred             ccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCe
Confidence            9999999999999999999999731                                     125899999999986  8


Q ss_pred             eeeCCCCCCHHH----HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHH
Q 019049          115 LFPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKF  189 (347)
Q Consensus       115 ~~~~p~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~  189 (347)
                      ++++|+++++++    +|++++++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++
T Consensus       148 ~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 1kol_A          148 LLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH  225 (398)
T ss_dssp             CEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             EEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence            999999999988    7889999999999995 789999999999997 9999999999999999 79999999999999


Q ss_pred             HHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEeCCCcc----------------chHHHHhccccCCEEEEEee
Q 019049          190 LKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGK----------------LTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       190 ~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ++++|++ ++++++.+ +   .+.+.+.+++.++|++|||+|.+                .+..++++++++|+++.+|.
T Consensus       226 a~~lGa~-~i~~~~~~~~---~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~  301 (398)
T 1kol_A          226 AKAQGFE-IADLSLDTPL---HEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL  301 (398)
T ss_dssp             HHHTTCE-EEETTSSSCH---HHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred             HHHcCCc-EEccCCcchH---HHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence            9999997 78877654 4   56677778778999999999975                57889999999999999986


Q ss_pred             c-CCC-----------CCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee---eeeceeeChhhH
Q 019049          253 A-SGE-----------IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT---IHISHTYSPSEA  317 (347)
Q Consensus       253 ~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~---~~~~~~~~~~~~  317 (347)
                      . .+.           ...++...++.+++++.++...         ..+.++++++++.+|+++   +.++++|+++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~  372 (398)
T 1kol_A          302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---------VMKYNRALMQAIMWDRINIAEVVGVQVISLDDA  372 (398)
T ss_dssp             CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---------HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGH
T ss_pred             ccCCcccccccccccccccccHHHHhhcccEEEecccC---------hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHH
Confidence            5 211           1124445677888888864321         146778899999999998   357899999999


Q ss_pred             HHHHHHHHcCCcceeEEEEeCCC
Q 019049          318 NLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       318 ~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                      ++||+.+.+++. ||+|++++..
T Consensus       373 ~~A~~~~~~~~~-gKvvi~~~~~  394 (398)
T 1kol_A          373 PRGYGEFDAGVP-KKFVIDPHKT  394 (398)
T ss_dssp             HHHHHHHHHTCS-CEEEECTTCS
T ss_pred             HHHHHHHhCCCc-eEEEEEeCCc
Confidence            999999998887 9999998654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=8.4e-51  Score=371.23  Aligned_cols=310  Identities=19%  Similarity=0.208  Sum_probs=262.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCC-----CeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCce
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-----TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY   75 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~   75 (347)
                      |||+++.+++.            +.++++|.|+++++     +||+|||.+++||++|++.+.|.++  ..+|.++|||+
T Consensus         3 MkA~~~~~~~~------------l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~--~~~p~v~GhE~   68 (398)
T 2dph_A            3 NKSVVYHGTRD------------LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEI   68 (398)
T ss_dssp             EEEEEEEETTE------------EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC--CCTTCBCCCCE
T ss_pred             cEEEEEEcCCC------------EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC--CCCCcccCCce
Confidence            89999998764            33468888883257     9999999999999999999988643  35789999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEe--------------------------------------cCCCcceeeEeeeCC--Ce
Q 019049           76 SGTVDAVGPNVSNFKVGDTVCGF--------------------------------------AALGSFAQFIVADQS--EL  115 (347)
Q Consensus        76 ~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~~g~~~~~~~~~~~--~~  115 (347)
                      +|+|+++|++|++|++||||++.                                      ..+|+|+||++++++  .+
T Consensus        69 ~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~  148 (398)
T 2dph_A           69 TGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYML  148 (398)
T ss_dssp             EEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHC
T ss_pred             EEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeE
Confidence            99999999999999999999852                                      135999999999987  89


Q ss_pred             eeCCCCCCHHH----HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049          116 FPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  190 (347)
Q Consensus       116 ~~~p~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~  190 (347)
                      +++|+++++++    ||+++++++|||+++ ..+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++++
T Consensus       149 ~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 2dph_A          149 LKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL  226 (398)
T ss_dssp             EECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             EECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            99999999998    899999999999999 6899999999999998 9999999999999999 999999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc---------------chHHHHhccccCCEEEEEeecCC
Q 019049          191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK---------------LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       191 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +++|++ ++++.+.++.  .+.+.+.+++.++|++|||+|.+               .+..++++++++|+++.+|....
T Consensus       227 ~~lGa~-~i~~~~~~~~--~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~  303 (398)
T 2dph_A          227 SDAGFE-TIDLRNSAPL--RDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVG  303 (398)
T ss_dssp             HTTTCE-EEETTSSSCH--HHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCS
T ss_pred             HHcCCc-EEcCCCcchH--HHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccc
Confidence            999995 8888776641  34455667777899999999975               47889999999999999987621


Q ss_pred             ------------CCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--e--eeceeeChhhHHH
Q 019049          256 ------------EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--I--HISHTYSPSEANL  319 (347)
Q Consensus       256 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~--~~~~~~~~~~~~~  319 (347)
                                  ....++...++.+++++.++....         .+.++++++++.+|+++  +  .++++|+|+++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~  374 (398)
T 2dph_A          304 SDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV---------TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPD  374 (398)
T ss_dssp             CCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG---------GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHH
T ss_pred             cccccccccccCCcccccHHHHhhcCCEEEEeccCc---------HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHH
Confidence                        111244456788999888754321         35678899999999998  6  5789999999999


Q ss_pred             HHHHHHcCCcceeEEEEeCC
Q 019049          320 AFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       320 a~~~~~~~~~~gk~vv~~~~  339 (347)
                      ||+.+.+++. ||+|++++.
T Consensus       375 A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          375 GYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             HHHHHHTTCS-CEEEECTTS
T ss_pred             HHHHHhcCCc-eEEEEecCc
Confidence            9999998888 999998854

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=7.8e-52  Score=369.35  Aligned_cols=317  Identities=23%  Similarity=0.263  Sum_probs=262.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         5 mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~   74 (330)
T 1tt7_A            5 FQALQAEKNADDVS---------VHVKTISTED-LPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVV   74 (330)
T ss_dssp             EEEEEECCGGGSCC---------CEEEEEESSS-SCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEE
T ss_pred             ceEEEEecCCCCcc---------eeEeecCCCC-CCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEE
Confidence            89999999885422         3446899999 5999999999999999999999988765445679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHH--HhcCCCCCC-
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLSSGQ-  151 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~~~~-  151 (347)
                      ++  ++++|++||||++..      .+|+|+||++++++.++++|+++++++||+++..+.|||.++.  ..+++++|+ 
T Consensus        75 ~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~  152 (330)
T 1tt7_A           75 SS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKG  152 (330)
T ss_dssp             EC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             Ec--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCc
Confidence            96  468899999999763      4699999999999999999999999999999999999998875  346788987 


Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||+|++|++|++++|+|+..|++|++++++++|+++++++|+++++|+++.+.     +..+...+.++|++|||+|+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~-----~~~~~~~~~~~d~vid~~g~  227 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYD-----GTLKALSKQQWQGAVDPVGG  227 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCS-----SCCCSSCCCCEEEEEESCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchH-----HHHHHhhcCCccEEEECCcH
Confidence            9999999999999999999999999999999999999999999999998643210     00111224579999999999


Q ss_pred             cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      +.+..++++++++|+++.+|...+.....+...++.+++++.+++....   ......+.++++++++.+|++++.++++
T Consensus       228 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~~i~~~  304 (330)
T 1tt7_A          228 KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYC---PMDVRAAVWERMSSDLKPDQLLTIVDRE  304 (330)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSC---CHHHHHHHHHHTTTTSCCSCSTTSEEEE
T ss_pred             HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEecccc---CHHHHHHHHHHHHHHHhcCCcccccceE
Confidence            8889999999999999999876543223444567789999998743211   1122345677888888899998888899


Q ss_pred             eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          312 YSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       312 ~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      |+++++++||+.+.+++..||+|+++
T Consensus       305 ~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          305 VSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             ECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             EcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            99999999999999988899999863

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=3.8e-51  Score=370.78  Aligned_cols=319  Identities=17%  Similarity=0.186  Sum_probs=266.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC------------------
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ------------------   62 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~------------------   62 (347)
                      |||++.......           +.+++.|.|+ |+++||+|||.++++|++|++.+.|.++                  
T Consensus         8 mka~v~~~~~~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~   75 (379)
T 3iup_A            8 LRSRIKSSGELE-----------LSLDSIDTPH-PGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTAR   75 (379)
T ss_dssp             EEEEECTTSEEE-----------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred             HHHHHhcCCCCc-----------eEEEeccCCC-CCCCEEEEEEEEEecCHHHHHHhcCCcccccccccccccccccccc
Confidence            788877542221           4456899999 5999999999999999999999988531                  


Q ss_pred             ----------CCCCCCcccCCceeEEEEEeCCCC-CCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049           63 ----------EKPPLPFVPGSDYSGTVDAVGPNV-SNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALP  131 (347)
Q Consensus        63 ----------~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~  131 (347)
                                ....+|.++|||++|+|+++|++| ++|++||||++.. +|+|+||++++++.++++|+++++++||+++
T Consensus        76 ~p~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  154 (379)
T 3iup_A           76 VPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-GAMYSQYRCIPADQCLVLPEGATPADGASSF  154 (379)
T ss_dssp             CCHHHHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSS
T ss_pred             CccccccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-CCcceeEEEeCHHHeEECCCCCCHHHHHhhh
Confidence                      023468899999999999999999 8899999999986 5999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEec-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLG-AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  210 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g-~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  210 (347)
                      +..+|||+++. .+. ++|++|||+| ++|++|++++|+|+..|++|++++++++|+++++++|+++++|+++.++   .
T Consensus       155 ~~~~ta~~~~~-~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~---~  229 (379)
T 3iup_A          155 VNPLTALGMVE-TMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTF---M  229 (379)
T ss_dssp             HHHHHHHHHHH-HHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTH---H
T ss_pred             hhHHHHHHHHH-Hhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHH---H
Confidence            99999998774 444 8999999996 7799999999999999999999999999999999999999999998887   6


Q ss_pred             HHHHHHhcCCcccEEEeCCCccc-hHHHHhccc-----cC-----------CEEEEEeecCCCCCCcchhHhhhcceEEE
Q 019049          211 KEFLKARKLKGVDVLYDPVGGKL-TKESLKLLN-----WG-----------AQILVIGFASGEIPVIPANIALVKNWTVH  273 (347)
Q Consensus       211 ~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  273 (347)
                      +.+.+.+++.++|++|||+|++. ...++++++     ++           |+++.+|.....  ..+...++.+++++.
T Consensus       230 ~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~  307 (379)
T 3iup_A          230 QDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMG  307 (379)
T ss_dssp             HHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEE
T ss_pred             HHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC--ccccccccccceEEE
Confidence            77777787778999999999854 477777775     44           555555443211  123334567889999


Q ss_pred             EEEecccc-ccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhH--HHHHHHHHcCCcceeEEEEeCCC
Q 019049          274 GLYWGSYK-IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEA--NLAFSAIEDRKVIGKVMIAFDDM  340 (347)
Q Consensus       274 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~--~~a~~~~~~~~~~gk~vv~~~~~  340 (347)
                      +++...+. ...++...+.++++++++.+ .+++.++++|+++++  ++||+.+.+++..||+|++++..
T Consensus       308 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~g  376 (379)
T 3iup_A          308 GWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNKG  376 (379)
T ss_dssp             ECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTTT
T ss_pred             EEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCCC
Confidence            98876653 33566666788888898888 588889999999999  99999999999999999998754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.1e-49  Score=387.67  Aligned_cols=312  Identities=27%  Similarity=0.393  Sum_probs=268.2

Q ss_pred             eEEecccCCCCccccCCCCceeeecccc--CCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            3 ALVCRKLGDPTVSIHDEKSPIVLSKTEP--IPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         3 a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      .+.+..+|.++.        +.+ ++.+  .|. |+++||+|||.++|+|++|++.+.|.++    .|.++|||++|+|+
T Consensus       212 ~l~~~~~G~~~~--------L~~-~~~~~p~~~-~~~~eVlV~V~a~gin~~D~~~~~G~~~----~~~~lG~E~aG~V~  277 (795)
T 3slk_A          212 RLEATRPGSLDG--------LAL-VDEPTATAP-LGDGEVRIAMRAAGVNFRDALIALGMYP----GVASLGSEGAGVVV  277 (795)
T ss_dssp             CEEESSTTSSTT--------EEE-CCCHHHHSC-CCSSEEEEEEEEEEECHHHHHHTTTCCS----SCCCSCCCEEEEEE
T ss_pred             EEecCCCCCccc--------eEE-EeCCccCCC-CCCCEEEEEEEEEccCHHHHHHHcCCCC----CCccccceeEEEEE
Confidence            345566676643        333 4554  356 5999999999999999999999988764    35579999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  160 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g  160 (347)
                      ++|++|++|++||||+++. +|+|++|++++++.++++|+++++++||++++.++|||+++.+.+++++|++|||+|++|
T Consensus       278 ~vG~~V~~~~vGDrV~~~~-~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaG  356 (795)
T 3slk_A          278 ETGPGVTGLAPGDRVMGMI-PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAG  356 (795)
T ss_dssp             EECSSCCSSCTTCEEEECC-SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTB
T ss_pred             EeCCCCCcCCCCCEEEEEe-cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCC
Confidence            9999999999999999987 499999999999999999999999999999999999999998889999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049          161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  240 (347)
Q Consensus       161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  240 (347)
                      ++|++++|+|+.+|++|+++++++ |.+.++ +|+++++++.+.++   .+.+.+.|++.++|+||||+|++.+..++++
T Consensus       357 gvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~---~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~  431 (795)
T 3slk_A          357 GVGMAAIQLARHLGAEVYATASED-KWQAVE-LSREHLASSRTCDF---EQQFLGATGGRGVDVVLNSLAGEFADASLRM  431 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-SCGGGEECSSSSTH---HHHHHHHSCSSCCSEEEECCCTTTTHHHHTS
T ss_pred             HHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-cChhheeecCChhH---HHHHHHHcCCCCeEEEEECCCcHHHHHHHHH
Confidence            999999999999999999999765 556555 99999999998888   7788889999999999999999999999999


Q ss_pred             cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHH
Q 019049          241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA  320 (347)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a  320 (347)
                      ++++|+++.+|....... .. .....++.++.++.+.   ...+....+.++++++++.+|++++.+.++|+++++++|
T Consensus       432 l~~~Gr~v~iG~~~~~~~-~~-~~~~~~~~~~~~~~l~---~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA  506 (795)
T 3slk_A          432 LPRGGRFLELGKTDVRDP-VE-VADAHPGVSYQAFDTV---EAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEA  506 (795)
T ss_dssp             CTTCEEEEECCSTTCCCH-HH-HHHHSSSEEEEECCGG---GGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHH
T ss_pred             hcCCCEEEEeccccccCc-cc-ccccCCCCEEEEeecc---ccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHH
Confidence            999999999986543211 11 1223467777765532   334555678899999999999999999999999999999


Q ss_pred             HHHHHcCCcceeEEEEeCC
Q 019049          321 FSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       321 ~~~~~~~~~~gk~vv~~~~  339 (347)
                      |+.+.+++..||+|+++++
T Consensus       507 ~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          507 LRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             HHHHHHTCCCBEEEEECCC
T ss_pred             HHHHhcCCccceEEEecCc
Confidence            9999999999999999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=5e-49  Score=355.72  Aligned_cols=302  Identities=17%  Similarity=0.220  Sum_probs=252.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCC-CeEEEEEEEecCChhhHHHHhc--cCCCCCCC---CcccCCc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-TAVRVRVKATSLNYANYLQILG--KYQEKPPL---PFVPGSD   74 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~i~v~~~~i~~~d~~~~~g--~~~~~~~~---p~~~G~e   74 (347)
                      |||+++.++|.+           +.++++|.|+ |++ +||+|||.++++|++|++.+.|  .++. ..+   |.++|||
T Consensus         1 MkA~~~~~~g~~-----------l~~~~~~~P~-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~~~p~v~G~E   67 (366)
T 2cdc_A            1 MKAIIVKPPNAG-----------VQVKDVDEKK-LDSYGKIKIRTIYNGICGADREIVNGKLTLST-LPKGKDFLVLGHE   67 (366)
T ss_dssp             CEEEEECTTSCC-----------CEEEECCGGG-SCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSE
T ss_pred             CeEEEEeCCCCc-----------eEEEECcCCC-CCCCCEEEEEEEEEeeccccHHHHcCCCCCCC-CCcCCCCCcCCcc
Confidence            999999998863           3346889999 599 9999999999999999999988  5431 345   8999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEe-----------------------------c-CCCcceeeEeeeCCCeeeCCCCCCH
Q 019049           75 YSGTVDAVGPNVSNFKVGDTVCGF-----------------------------A-ALGSFAQFIVADQSELFPVPKGCDL  124 (347)
Q Consensus        75 ~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------~-~~g~~~~~~~~~~~~~~~~p~~~~~  124 (347)
                      ++|+|++  ++ ++|++||||++.                             . .+|+|+||++++++.++++|++++ 
T Consensus        68 ~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-  143 (366)
T 2cdc_A           68 AIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-  143 (366)
T ss_dssp             EEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-
T ss_pred             eEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-
Confidence            9999999  67 889999999863                             1 469999999999999999999999 


Q ss_pred             HHHccCcchHHHHHHHHH--H--hcCCC--C-------CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh---hhHH
Q 019049          125 LAAAALPVAFGTSHVALV--H--RAQLS--S-------GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---EKIK  188 (347)
Q Consensus       125 ~~aa~l~~~~~~a~~~l~--~--~~~~~--~-------~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~---~~~~  188 (347)
                      ++|| ++.++.|||+++.  .  .++++  +       |++|||+|+ |++|++++|+++..|++|+++++++   ++++
T Consensus       144 ~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          144 DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            7765 7789999999996  4  78898  8       999999999 9999999999999999999999998   8899


Q ss_pred             HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-ch-HHHHhccccCCEEEEEeecCCCCCCcchhH--
Q 019049          189 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFASGEIPVIPANI--  264 (347)
Q Consensus       189 ~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~--  264 (347)
                      +++++|++++ | .+ ++   .+.+.+ +. .++|++|||+|.+ .+ +.++++++++|+++.+|........++...  
T Consensus       222 ~~~~~ga~~v-~-~~-~~---~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~  293 (366)
T 2cdc_A          222 VIEETKTNYY-N-SS-NG---YDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQ  293 (366)
T ss_dssp             HHHHHTCEEE-E-CT-TC---SHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHH
T ss_pred             HHHHhCCcee-c-hH-HH---HHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhH
Confidence            9999999988 8 66 66   344445 44 6899999999985 67 899999999999999987654322345555  


Q ss_pred             -hhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCc------eeeeeceeeChhhHHHHHHHH-HcCCcceeEEEE
Q 019049          265 -ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL------ITIHISHTYSPSEANLAFSAI-EDRKVIGKVMIA  336 (347)
Q Consensus       265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------l~~~~~~~~~~~~~~~a~~~~-~~~~~~gk~vv~  336 (347)
                       ++.+++++.++....         .+.++++++++.+|+      +++.++++|+++++++||+.+ .++...||+|++
T Consensus       294 ~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~  364 (366)
T 2cdc_A          294 EIVHTNKTIIGLVNGQ---------KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRIL  364 (366)
T ss_dssp             HHHHTTCEEEECCCCC---------HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEE
T ss_pred             HHHhcCcEEEEecCCC---------HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEe
Confidence             788999999875432         477899999999999      446688999999999999994 346678999998


Q ss_pred             eC
Q 019049          337 FD  338 (347)
Q Consensus       337 ~~  338 (347)
                      ++
T Consensus       365 ~~  366 (366)
T 2cdc_A          365 WE  366 (366)
T ss_dssp             CC
T ss_pred             cC
Confidence            74

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=6.5e-47  Score=337.96  Aligned_cols=312  Identities=23%  Similarity=0.276  Sum_probs=258.2

Q ss_pred             CceEEeccc--CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049            1 MEALVCRKL--GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~   78 (347)
                      ||||++.++  |.+..      .. +.+++.|.|+ |++|||+|||.++++|+.|.. +.    .+..+|.++|||++|+
T Consensus         8 mka~~~~~~~~g~~~~------~~-l~~~e~~~P~-~~~~eVlVkv~a~gi~~~~~~-~~----~~~~~p~~~g~e~~G~   74 (333)
T 1v3u_A            8 AKSWTLKKHFQGKPTQ------SD-FELKTVELPP-LKNGEVLLEALFLSVDPYMRI-AS----KRLKEGAVMMGQQVAR   74 (333)
T ss_dssp             EEEEEECC-----CCG------GG-EEEEEEECCC-CCTTCEEEEEEEEECCTHHHH-HT----TTCCTTSBCCCCEEEE
T ss_pred             ccEEEEeecCCCCCCc------cc-eEEEeCCCCC-CCCCEEEEEEEEeccCHHHcc-cc----CcCCCCcccccceEEE
Confidence            899999885  54311      12 3446899999 599999999999999999873 21    1235688999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCC----CCHHH-HccCcchHHHHHHHHHHhcCCCCCCEE
Q 019049           79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKG----CDLLA-AAALPVAFGTSHVALVHRAQLSSGQVL  153 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~----~~~~~-aa~l~~~~~~a~~~l~~~~~~~~~~~V  153 (347)
                      |++.  ++++|++||||++.   |+|++|++++++.++++|++    +++++ +|+++++++|||+++.+.+++++|++|
T Consensus        75 Vv~~--~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~v  149 (333)
T 1v3u_A           75 VVES--KNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETV  149 (333)
T ss_dssp             EEEE--SCTTSCTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEE
T ss_pred             EEec--CCCCCCCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEE
Confidence            9995  57899999999985   78999999999999999997    88888 588999999999999888999999999


Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049          154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGGK  232 (347)
Q Consensus       154 lI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  232 (347)
                      ||+|++|++|++++|+++..|++|+++++++++++.++++|++.++|+.+ .++   .+.+.+.+. +++|++||++|.+
T Consensus       150 lV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~---~~~~~~~~~-~~~d~vi~~~g~~  225 (333)
T 1v3u_A          150 LVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL---EEALKKASP-DGYDCYFDNVGGE  225 (333)
T ss_dssp             EEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH---HHHHHHHCT-TCEEEEEESSCHH
T ss_pred             EEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHH---HHHHHHHhC-CCCeEEEECCChH
Confidence            99999999999999999999999999999999999999999999999887 555   444555554 5899999999998


Q ss_pred             chHHHHhccccCCEEEEEeecCCC------CCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049          233 LTKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       233 ~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                      .+..++++++++|+++.+|.....      ....+...++.+++++.|+....+   .+....+.++++++++.+|++++
T Consensus       226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~  302 (333)
T 1v3u_A          226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW---QGDVREKALRDLMKWVLEGKIQY  302 (333)
T ss_dssp             HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGC---CTHHHHHHHHHHHHHHHTTSSCC
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhc---chHHHHHHHHHHHHHHHCCCccC
Confidence            889999999999999999876431      111345567889999999765443   22345678899999999999998


Q ss_pred             eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049          307 HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  337 (347)
Q Consensus       307 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  337 (347)
                      .+...++++++++||+.+.+++..||+|+++
T Consensus       303 ~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          303 HEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             CEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            7777789999999999999998899999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=4e-46  Score=334.58  Aligned_cols=319  Identities=19%  Similarity=0.260  Sum_probs=260.0

Q ss_pred             CceEEeccc--CCCCccccCCCC-ceeee-ccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC---CCCCcccCC
Q 019049            1 MEALVCRKL--GDPTVSIHDEKS-PIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---PPLPFVPGS   73 (347)
Q Consensus         1 m~a~~~~~~--~~~~~~~~~~~~-~~~~~-~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~---~~~p~~~G~   73 (347)
                      ||++++...  +.|+       . .+.+. ++++.|..|++|||+|||.++++|+.|. ...|.+...   ..+|.++||
T Consensus         5 mka~~m~a~~~~~p~-------~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~   76 (345)
T 2j3h_A            5 NKQVILKDYVSGFPT-------ESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQ   76 (345)
T ss_dssp             EEEEEECSCBSSSCC-------GGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTS
T ss_pred             ceEEEEecCCCCCCC-------ccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCC
Confidence            688888776  5543       1 24443 2677776359999999999999988875 455543211   236889999


Q ss_pred             ceeEEEEE--eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCC--eeeCCC---CCCHHHHccCcchHHHHHHHHHHhcC
Q 019049           74 DYSGTVDA--VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSE--LFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQ  146 (347)
Q Consensus        74 e~~G~V~~--vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~~~p~---~~~~~~aa~l~~~~~~a~~~l~~~~~  146 (347)
                      |++|++.+  +|+++++|++||||+++   |+|++|++++++.  ++++|+   +++++ +|+++++++|||+++.+.++
T Consensus        77 e~~G~~~~GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~  152 (345)
T 2j3h_A           77 PIQGYGVSRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCS  152 (345)
T ss_dssp             BCEEEEEEEEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSC
T ss_pred             eeecceEEEEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhC
Confidence            99999999  99999999999999986   6899999999876  999996   45665 67888999999999988899


Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCC-CchhhHHHHHHHhcCCcccE
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~  224 (347)
                      +++|++|||+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++|+.+. ++   .+.+.+.+ +.++|+
T Consensus       153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~---~~~~~~~~-~~~~d~  228 (345)
T 2j3h_A          153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDL---TAALKRCF-PNGIDI  228 (345)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCS---HHHHHHHC-TTCEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHH---HHHHHHHh-CCCCcE
Confidence            999999999999999999999999999999999999999999998 7999999998764 55   44444555 368999


Q ss_pred             EEeCCCccchHHHHhccccCCEEEEEeecCCC-----CCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHH
Q 019049          225 LYDPVGGKLTKESLKLLNWGAQILVIGFASGE-----IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA  299 (347)
Q Consensus       225 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  299 (347)
                      +|||+|.+.+..++++++++|+++.+|.....     ....+...++.+++++.++....+    +....+.++++++++
T Consensus       229 vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~l~  304 (345)
T 2j3h_A          229 YFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDF----YDKYSKFLEFVLPHI  304 (345)
T ss_dssp             EEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGG----GGGHHHHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhh----hhhHHHHHHHHHHHH
Confidence            99999998889999999999999999876531     122344567889999988754432    122357789999999


Q ss_pred             HcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049          300 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  339 (347)
Q Consensus       300 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~  339 (347)
                      .+|++++.+..+|+|+++++||+.+.+++..||+|+.+++
T Consensus       305 ~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          305 REGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             HTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             HCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            9999998888889999999999999999999999999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.6e-38  Score=340.20  Aligned_cols=292  Identities=23%  Similarity=0.309  Sum_probs=254.5

Q ss_pred             CCeEEEEEEEecCChhhHHHHhccCCCC------CCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEee
Q 019049           37 STAVRVRVKATSLNYANYLQILGKYQEK------PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVA  110 (347)
Q Consensus        37 ~~eV~i~v~~~~i~~~d~~~~~g~~~~~------~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~  110 (347)
                      ++||+|+|.++|+|+.|++...|.++..      ...|.++|+|++|+|          .+||+|+++...|+|++|+++
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV~g~~~~G~~Aeyv~v 1628 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRVMGMVPAEGLATSVLL 1628 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCEEEECSSCCSBSEEEC
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEEEEeecCCceeeEEEc
Confidence            7999999999999999999999876421      123568999999987          379999999878999999999


Q ss_pred             eCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          111 DQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       111 ~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      +++.++++|+++++++||++++.++|||+++...+++++|++|||+|++|++|++++|+|+..|++|++++.+++|++++
T Consensus      1629 p~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l 1708 (2512)
T 2vz8_A         1629 LQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYL 1708 (2512)
T ss_dssp             CGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             ccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHH
Confidence            99999999999999999999999999999998889999999999999999999999999999999999999999999999


Q ss_pred             Hh----cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhh
Q 019049          191 KS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIAL  266 (347)
Q Consensus       191 ~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  266 (347)
                      ++    +|+++++++.+.++   .+.+.+.+++.++|+||||++++.+..++++++++|+++.+|.............++
T Consensus      1709 ~~~~~~lga~~v~~~~~~~~---~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~ 1785 (2512)
T 2vz8_A         1709 QARFPQLDETCFANSRDTSF---EQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVF 1785 (2512)
T ss_dssp             HHHCTTCCSTTEEESSSSHH---HHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGG
T ss_pred             HhhcCCCCceEEecCCCHHH---HHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccccCccccccc
Confidence            86    78999999988777   677888888889999999999888999999999999999998643221112223456


Q ss_pred             hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCC
Q 019049          267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK  341 (347)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~  341 (347)
                      .+++++.++....+....+..+.+.++.+.+++.+|.+++.+.++|+++++++||+.+.+++..||+|+.++.+.
T Consensus      1786 ~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~~~ 1860 (2512)
T 2vz8_A         1786 LKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREEE 1860 (2512)
T ss_dssp             GGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSCCC
T ss_pred             ccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCCcc
Confidence            889999998776655555666677777788888899999989999999999999999999999999999997653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.94  E-value=3.7e-26  Score=188.42  Aligned_cols=194  Identities=26%  Similarity=0.359  Sum_probs=148.1

Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  192 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~  192 (347)
                      +.++++|+++++++||++++++.|||+++.+.+++++|++|+|+|++|++|++++|+++..|++|+++++++++.+.+++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            46889999999999999999999999999778899999999999999999999999999999999999999999989999


Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceE
Q 019049          193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWT  271 (347)
Q Consensus       193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~  271 (347)
                      +|++.++|..+.+.   .+.+.+.+.+.++|+++|++|...+..++++++++|+++.+|..... ....+. ..+.++++
T Consensus        82 ~g~~~~~d~~~~~~---~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~  157 (198)
T 1pqw_A           82 LGVEYVGDSRSVDF---ADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGL-AALAKSAS  157 (198)
T ss_dssp             TCCSEEEETTCSTH---HHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEG-GGGTTTCE
T ss_pred             cCCCEEeeCCcHHH---HHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCCh-hHhcCCcE
Confidence            99999888887665   56666666666899999999988889999999999999999876531 112222 23468888


Q ss_pred             EEEEEecccccc-CchhHHHHHHHHHHHHHcCceeeeecee
Q 019049          272 VHGLYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHT  311 (347)
Q Consensus       272 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~~~~~~~  311 (347)
                      +.++.. .+... .+....+.++++++++.+|++++.+.++
T Consensus       158 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          158 FSVVDL-DLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             EEECCH-HHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             EEEEeh-HHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            877544 22212 3444467899999999999999765544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.00  E-value=9.6e-10  Score=98.23  Aligned_cols=142  Identities=18%  Similarity=0.179  Sum_probs=97.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +++|+|+|+ |++|+++++.++.+|++|++++++++|.+.++++++..  +++....       .+.+..  .++|++|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA-------EIETAV--AEADLLIG  236 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH-------HHHHHH--HTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHH-------HHHHHH--cCCCEEEE
Confidence            489999999 99999999999999999999999999999998776543  3333221       122222  26899999


Q ss_pred             CCCccc-------hHHHHhccccCCEEEEEeecCCC------CCCcchhHhhhcceEEEEEEeccccccCch-----hHH
Q 019049          228 PVGGKL-------TKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYKIHRPH-----VLE  289 (347)
Q Consensus       228 ~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  289 (347)
                      |++.+.       ....++.++++|+++.++...+.      ...++...+..+++++.+..  ++....+.     ...
T Consensus       237 ~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~--~lp~~~~~~~s~~~~~  314 (361)
T 1pjc_A          237 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVP--NMPGAVPWTATQALNN  314 (361)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCS--CGGGGCHHHHHHHHHH
T ss_pred             CCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeC--CcchhhHHHHHHHHHH
Confidence            998633       56788999999999999865432      11233334456677766543  11111121     123


Q ss_pred             HHHHHHHHHHHcCc
Q 019049          290 DSLRELLLWAAKGL  303 (347)
Q Consensus       290 ~~~~~~~~~l~~g~  303 (347)
                      ..+..+++++.+|.
T Consensus       315 ~~~~~l~~l~~~G~  328 (361)
T 1pjc_A          315 STLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHhCCc
Confidence            55678888888774

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.87  E-value=1.3e-11  Score=111.98  Aligned_cols=171  Identities=18%  Similarity=0.242  Sum_probs=125.6

Q ss_pred             ccCCceeEEEEEeCCCCCCCCCCCEEE------Ee---cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHH
Q 019049           70 VPGSDYSGTVDAVGPNVSNFKVGDTVC------GF---AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVA  140 (347)
Q Consensus        70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~------~~---~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  140 (347)
                      ..|++.++.|.++|+++..+.+|+.++      ++   ...|++++|.......++++|++++.++++. ..+..++|.+
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~a  154 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAA  154 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHH
Confidence            478999999999999999999999862      11   1237788888777788888898887776554 3566677777


Q ss_pred             HHHhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhH-HHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049          141 LVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       141 l~~~~~---~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      +.....   -.+|++|+|+|+ |++|.++++.++..|+ +|++++++.++. +.++++|++ ++++.  +    ..+.. 
T Consensus       155 v~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--~----l~~~l-  225 (404)
T 1gpj_A          155 VELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD--E----LVDHL-  225 (404)
T ss_dssp             HHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--G----HHHHH-
T ss_pred             HHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecHH--h----HHHHh-
Confidence            633221   247999999999 9999999999999999 999999999886 667788875 33221  1    22222 


Q ss_pred             HhcCCcccEEEeCCCccc--h-HHHHhc--c--ccCCEEEEEeecC
Q 019049          216 ARKLKGVDVLYDPVGGKL--T-KESLKL--L--NWGAQILVIGFAS  254 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~~--~-~~~~~~--l--~~~G~~v~~g~~~  254 (347)
                          .++|+|++|++...  . ...+..  +  +++|.+++++...
T Consensus       226 ----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          226 ----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             ----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             ----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence                36899999998632  2 245554  4  5677777777644

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.82  E-value=3.4e-08  Score=88.44  Aligned_cols=144  Identities=22%  Similarity=0.307  Sum_probs=91.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++ +|+....+..+.   +...+..     .++|++++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~---~~l~~~~-----~~~DvVi~  235 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATE---ANIKKSV-----QHADLLIG  235 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCH---HHHHHHH-----HHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCH---HHHHHHH-----hCCCEEEE
Confidence            3589999999 999999999999999999999999998888765 776533332221   1122222     26899999


Q ss_pred             CCCccc-------hHHHHhccccCCEEEEEeecCCC------CCCcchhHhhhcceEEEEEEeccccccCch-----hHH
Q 019049          228 PVGGKL-------TKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYKIHRPH-----VLE  289 (347)
Q Consensus       228 ~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  289 (347)
                      |++.+.       ....+..++++|+++.++...+.      ....+...+..+++.+.+..  ++....|+     ...
T Consensus       236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~--~lp~~~p~~as~~~~~  313 (369)
T 2eez_A          236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVA--NMPGAVPRTSTFALTN  313 (369)
T ss_dssp             CCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCS--CSGGGSHHHHHHHHHH
T ss_pred             CCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeC--CcchhcHHHHHHHHHH
Confidence            998542       57788999999999999865432      11122223345666666543  11122232     113


Q ss_pred             HHHHHHHHHHHcCc
Q 019049          290 DSLRELLLWAAKGL  303 (347)
Q Consensus       290 ~~~~~~~~~l~~g~  303 (347)
                      +.++.+++++.+|.
T Consensus       314 ~~~~~l~~l~~~g~  327 (369)
T 2eez_A          314 QTLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCh
Confidence            55677778877764

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.81  E-value=1.2e-08  Score=91.85  Aligned_cols=125  Identities=25%  Similarity=0.334  Sum_probs=86.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCC---------------CC-chhhHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSN---------------ES-VIPSVK  211 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~---------------~~-~~~~~~  211 (347)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++++|+..+ ++..+               .+ ......
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            6889999998 999999999999999999999999999999989998754 22211               00 000112


Q ss_pred             HHHHHhcCCcccEEEeCC---Ccc---c-hHHHHhccccCCEEEEEeecCCC-CC-CcchhHhhhcceEEEEEE
Q 019049          212 EFLKARKLKGVDVLYDPV---GGK---L-TKESLKLLNWGAQILVIGFASGE-IP-VIPANIALVKNWTVHGLY  276 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~  276 (347)
                      .+.+..  .++|++++|+   |.+   . ....++.|++++.++.++...+. .. ..+...+..+++++.++.
T Consensus       250 ~l~~~~--~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~  321 (384)
T 1l7d_A          250 AVLKEL--VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHT  321 (384)
T ss_dssp             HHHHHH--TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCS
T ss_pred             HHHHHh--CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeC
Confidence            233333  3689999999   532   2 37789999999999999865432 21 123333456677777643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.80  E-value=2e-09  Score=98.84  Aligned_cols=158  Identities=20%  Similarity=0.161  Sum_probs=107.1

Q ss_pred             CCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc-
Q 019049           67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA-  145 (347)
Q Consensus        67 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-  145 (347)
                      +|.++ .++.|+|+++|.++.++.      .....|.+........+.+.+-    .+.   .+.....++|+++.+.. 
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~------a~~~~Gilv~~~~~vn~sVae~----~~r---~l~~~~~s~~~g~~r~~~  269 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY------QFAAAGDLAFPAINVNDSVTKS----KFD---NKYGTRHSLIDGINRGTD  269 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH------HHHHTTCCCSCEEECTTSHHHH----TTH---HHHHHHHHHHHHHHHHHC
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH------HHHHcCCEEEecCCccHHHHHH----HHh---hhhhhhhhhhHHHHhccC
Confidence            34445 899999999998887661      1111233333222211222210    001   11223455666664332 


Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      ...+|++|+|+|. |.+|..+++.++.+|++|+++++++.+.+.++++|++ +.     +    ..+.   .  .++|+|
T Consensus       270 ~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~-----~----l~e~---l--~~aDvV  333 (494)
T 3ce6_A          270 ALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VV-----T----VEEA---I--GDADIV  333 (494)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----C----HHHH---G--GGCSEE
T ss_pred             CCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Ee-----c----HHHH---H--hCCCEE
Confidence            2678999999999 9999999999999999999999999998888999985 22     1    2222   1  478999


Q ss_pred             EeCCCccc-hH-HHHhccccCCEEEEEeecC
Q 019049          226 YDPVGGKL-TK-ESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       226 ~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  254 (347)
                      ++|+|... +. ..++.++++|+++.+|...
T Consensus       334 i~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          334 VTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             EECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             EECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            99999743 44 7889999999999987654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.75  E-value=5e-08  Score=87.51  Aligned_cols=97  Identities=20%  Similarity=0.213  Sum_probs=75.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++ +|+....+....   ....+.   .  .++|++++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~---~~l~~~---l--~~aDvVi~  237 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA---YELEGA---V--KRADLVIG  237 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH---HHHHHH---H--HHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH---HHHHHH---H--cCCCEEEE
Confidence            5789999999 999999999999999999999999999888876 776532222111   112222   2  26899999


Q ss_pred             CCCccc-------hHHHHhccccCCEEEEEeecC
Q 019049          228 PVGGKL-------TKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       228 ~~g~~~-------~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      |++.+.       ....++.|+++|.++.++...
T Consensus       238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             CCCcCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            987543       577889999999999998654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.62  E-value=5e-08  Score=88.05  Aligned_cols=125  Identities=22%  Similarity=0.319  Sum_probs=85.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCC-----CCc----hh-----hHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSN-----ESV----IP-----SVKEF  213 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~-----~~~----~~-----~~~~~  213 (347)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++++.++++|+..+. +..+     ..+    .+     ....+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            5789999999 9999999999999999999999999999999999986541 1100     000    00     00123


Q ss_pred             HHHhcCCcccEEEeCCCc------cch-HHHHhccccCCEEEEEeecCCC-CCC-cchh-HhhhcceEEEEEE
Q 019049          214 LKARKLKGVDVLYDPVGG------KLT-KESLKLLNWGAQILVIGFASGE-IPV-IPAN-IALVKNWTVHGLY  276 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~------~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~-~~~~-~~~~~~~~~~~~~  276 (347)
                      .+..  .++|++|+|++.      ..+ ...++.|++++.++.++...+. .+. .+.. .+..+++++.+..
T Consensus       250 ~e~~--~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQA--KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHH--HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHh--CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            3333  268999999522      223 6789999999999999865332 221 1111 2456788888753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.35  E-value=2.9e-05  Score=66.02  Aligned_cols=183  Identities=17%  Similarity=0.203  Sum_probs=105.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +|+.+||+|+++++|.+.++.+...|++|++++++.++++.+ +++|.....-.-+..-.++++++.+..  ..+++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999999999887665 456643222212222222233333322  13579999


Q ss_pred             EeCCCcc--------------------------chHHHHhccccCCEEEEEeecCCCCCCcc---hh-------------
Q 019049          226 YDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASGEIPVIP---AN-------------  263 (347)
Q Consensus       226 ~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~-------------  263 (347)
                      ++++|..                          ..+.++..|+++|+++.++...+......   +.             
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~l  187 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNW  187 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            9998841                          12334558888999999876543222111   11             


Q ss_pred             --HhhhcceEEEEEEeccccccCch----hHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC---cceeEE
Q 019049          264 --IALVKNWTVHGLYWGSYKIHRPH----VLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK---VIGKVM  334 (347)
Q Consensus       264 --~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~---~~gk~v  334 (347)
                        .+...++++.....+......-.    ......+...+.+.+.   .+..+.-..+|+-++.-++.+..   ..|..+
T Consensus       188 A~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i  264 (273)
T 4fgs_A          188 ILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQ---VPMGRVGRAEEVAAAALFLASDDSSFVTGAEL  264 (273)
T ss_dssp             HHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHH---STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCchhcCccCCeE
Confidence              12345677777665543221100    0011112222222111   12233346788999988887643   345443

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.33  E-value=2e-05  Score=66.13  Aligned_cols=100  Identities=16%  Similarity=0.135  Sum_probs=72.0

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ....++.++++||..|+ | .|..+..+++. +.+|++++.+++..+.+++    .+...-+.....++.       +..
T Consensus        84 ~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~-------~~~  153 (248)
T 2yvl_A           84 ALKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFK-------DAE  153 (248)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTT-------TSC
T ss_pred             HHhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChh-------hcc
Confidence            36678889999999998 6 69999999988 8899999999998887765    342111111111210       011


Q ss_pred             -cCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          218 -KLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 -~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                       ....||+|+...+.  ..+..+.++|+++|+++...
T Consensus       154 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          154 VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred             cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             23579999987775  45688999999999999864

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.30  E-value=2.6e-06  Score=75.37  Aligned_cols=103  Identities=18%  Similarity=0.204  Sum_probs=76.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC-----CCCc---------hhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS-----NESV---------IPSVKEFL  214 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~-----~~~~---------~~~~~~~~  214 (347)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++++.++++|+..+- ..     ...+         ......+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~-l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLD-LGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECC-CC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccchhhhhHHHHhhhHHHHH
Confidence            5789999999 9999999999999999999999999999999999976431 10     0001         01122222


Q ss_pred             HHhcCCcccEEEeCCCc-----c--chHHHHhccccCCEEEEEeecCC
Q 019049          215 KARKLKGVDVLYDPVGG-----K--LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +..  ..+|+||.|+..     +  ..+..++.+++++.++.++...+
T Consensus       261 e~l--~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~G  306 (381)
T 3p2y_A          261 DAI--TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETG  306 (381)
T ss_dssp             HHH--TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGT
T ss_pred             HHH--hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCC
Confidence            333  579999998632     2  23789999999999999986654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.26  E-value=1e-06  Score=67.73  Aligned_cols=106  Identities=12%  Similarity=0.173  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HHhcCCcEEEeCCCCCchhhHHH
Q 019049          134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      ++.++.++. .+....+++|+|+|+ |.+|...++.+...|++|++.++++++.+. ++++|... ....  +    ..+
T Consensus         6 ~sv~~~a~~-~~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~--~----~~~   76 (144)
T 3oj0_A            6 VSIPSIVYD-IVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLIN--D----IDS   76 (144)
T ss_dssp             CSHHHHHHH-HHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECS--C----HHH
T ss_pred             ccHHHHHHH-HHHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-Eeec--C----HHH
Confidence            345566663 333345899999998 999999999998899999999999988765 45677432 2222  1    222


Q ss_pred             HHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeec
Q 019049          213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      ..     .++|+|++|++.........++++++.++.++.+
T Consensus        77 ~~-----~~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           77 LI-----KNNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             HH-----HTCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             Hh-----cCCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            22     2689999999974322223778888888887654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.25  E-value=3.4e-06  Score=75.25  Aligned_cols=103  Identities=17%  Similarity=0.204  Sum_probs=75.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC--------CCCch---------hhHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS--------NESVI---------PSVK  211 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~--------~~~~~---------~~~~  211 (347)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++++++.++++|+..+-...        ...+.         .+..
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            5689999999 9999999999999999999999999999999999975322100        00010         0112


Q ss_pred             HHHHHhcCCcccEEEeCCCc-----c--chHHHHhccccCCEEEEEeecC
Q 019049          212 EFLKARKLKGVDVLYDPVGG-----K--LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      .+.+..  .+.|+||.|+..     +  ..+..++.|+++..++.++...
T Consensus       268 ~l~e~l--~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~  315 (405)
T 4dio_A          268 LVAEHI--AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVER  315 (405)
T ss_dssp             HHHHHH--HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHh--cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCC
Confidence            222333  478999999642     2  2378999999999999998644

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.12  E-value=4e-05  Score=56.17  Aligned_cols=92  Identities=20%  Similarity=0.205  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+.+|+|+|+ |.+|..+++.+...| ++|+++++++++.+.+...+...+. .+-.+    .+.+.+..  .++|++|+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~----~~~~~~~~--~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDAKD----EAGLAKAL--GGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCTTC----HHHHHHHT--TTCSEEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecCCC----HHHHHHHH--cCCCEEEE
Confidence            3568999999 999999999999999 7999999999988888766654332 22212    22333333  37999999


Q ss_pred             CCCccchHHHHhccc-cCCEEE
Q 019049          228 PVGGKLTKESLKLLN-WGAQIL  248 (347)
Q Consensus       228 ~~g~~~~~~~~~~l~-~~G~~v  248 (347)
                      |++............ .+-.++
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~   97 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYF   97 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEE
T ss_pred             CCCchhhHHHHHHHHHhCCCEE
Confidence            998655444444433 343444

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.07  E-value=2.5e-05  Score=66.83  Aligned_cols=100  Identities=15%  Similarity=0.251  Sum_probs=72.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ..++++++++||.+|+ |..|+.++.+++..|++|++++.+++..+.+++    .|.+.+ .....+..+       . .
T Consensus       116 ~la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~gDa~~-------l-~  185 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGV-NVITGDETV-------I-D  185 (298)
T ss_dssp             HHTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSE-EEEESCGGG-------G-G
T ss_pred             HHcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEECchhh-------C-C
Confidence            3578899999999999 776777777888889999999999998887765    353211 111222211       1 2


Q ss_pred             CCcccEEEeCCCc----cchHHHHhccccCCEEEEEee
Q 019049          219 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       219 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ...||+|+.....    ..++.+.+.|+|+|+++....
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            4689999976543    356889999999999998753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.05  E-value=4.9e-05  Score=68.05  Aligned_cols=103  Identities=18%  Similarity=0.232  Sum_probs=77.6

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049          137 SHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       137 a~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      .+.++.+..+ .-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|+.. .     +    .++.. 
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~-----~----Leeal-  273 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-V-----K----LNEVI-  273 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-C-----C----HHHHT-
T ss_pred             HHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-c-----c----HHHHH-
Confidence            3444544333 458999999999 99999999999999999999999988777777777532 1     1    22222 


Q ss_pred             HhcCCcccEEEeCCCcc-ch-HHHHhccccCCEEEEEeecCC
Q 019049          216 ARKLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~  255 (347)
                          ...|+++.|.|.. .+ ...+..|++++.++.++....
T Consensus       274 ----~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          274 ----RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             ----TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             ----hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence                3689999998864 44 488999999999998876543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.99  E-value=5.2e-05  Score=64.09  Aligned_cols=106  Identities=19%  Similarity=0.275  Sum_probs=70.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|+++++|...++.+...|++|+++++++++.+.+. +++... .+..+-.+. +.++.+.+..  ..+++|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL-NEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999999999988776664 344322 222221111 2233322221  1247999


Q ss_pred             EEeCCCcc--------------------------chHHHHhccccCCEEEEEeecCC
Q 019049          225 LYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       225 v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +++++|..                          ..+.++..++.+|+++.++....
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            99998741                          01223446667899999876543

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.99  E-value=7.5e-05  Score=63.88  Aligned_cols=102  Identities=17%  Similarity=0.266  Sum_probs=71.3

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      +.....+.++++||-.|+ |. |..+..+++..  +.+|++++.+++..+.+++    .|...-+.....++.+      
T Consensus       104 i~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~------  175 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE------  175 (277)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG------
T ss_pred             HHHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH------
Confidence            335678899999999998 55 88888899885  4699999999988777754    3431111222222211      


Q ss_pred             HHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          215 KARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                       ......||+|+...+.  ..+..+.++|+++|+++...
T Consensus       176 -~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          176 -GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             -CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -cccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             0223579999976654  46788999999999998864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.98  E-value=4.8e-05  Score=65.68  Aligned_cols=92  Identities=18%  Similarity=0.267  Sum_probs=72.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|+|+|. |.+|..+++.++.+|++|++.+++.++.+.++++|+.. ++..  +    ..+.   .  ...|+|+.+
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~~--~----l~~~---l--~~aDvVi~~  220 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHIS--K----AAQE---L--RDVDVCINT  220 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEGG--G----HHHH---T--TTCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cChh--h----HHHH---h--cCCCEEEEC
Confidence            6889999998 99999999999999999999999988877777788653 2211  1    2222   1  478999999


Q ss_pred             CCccch-HHHHhccccCCEEEEEeec
Q 019049          229 VGGKLT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       229 ~g~~~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      ++...+ ...+..+++++.++.++..
T Consensus       221 ~p~~~i~~~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             CSSCCBCHHHHHHSCTTCEEEECSST
T ss_pred             CChHHhCHHHHHhcCCCCEEEEecCC
Confidence            986544 5678899999999988753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.98  E-value=0.00053  Score=58.41  Aligned_cols=82  Identities=26%  Similarity=0.346  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +++.. ..+..+-.+ .+.++++.+..  ..+++|+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999988776553 44422 222222111 12233333221  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.98  E-value=1.8e-05  Score=61.48  Aligned_cols=90  Identities=12%  Similarity=0.169  Sum_probs=62.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      ..++++|+|.|+ |.+|..+++.++..|++|+++++++++.+.++ ..|... +..+..+    .. .+......++|++
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~~----~~-~l~~~~~~~ad~V   88 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFT-VVGDAAE----FE-TLKECGMEKADMV   88 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEE-EESCTTS----HH-HHHTTTGGGCSEE
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcE-EEecCCC----HH-HHHHcCcccCCEE
Confidence            456789999998 99999999999999999999999998887776 667643 3322221    11 2222233579999


Q ss_pred             EeCCCccch-HHHHhcccc
Q 019049          226 YDPVGGKLT-KESLKLLNW  243 (347)
Q Consensus       226 ~d~~g~~~~-~~~~~~l~~  243 (347)
                      |.|++.+.. ..+...++.
T Consensus        89 i~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           89 FAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EECSSCHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHH
Confidence            999998543 334444443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.95  E-value=6.3e-05  Score=62.96  Aligned_cols=179  Identities=14%  Similarity=0.109  Sum_probs=101.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d  227 (347)
                      +++|||+|+++++|.+.++.+...|++|+++++++++.+.+.+.+.....-.-+..-.++++++.+..  ..+++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            37899999999999999999999999999999999888777665533222212222222233333221  1257999999


Q ss_pred             CCCcc--------------------------chHHHHh-ccccCCEEEEEeecCCCCCCcch-hH---------------
Q 019049          228 PVGGK--------------------------LTKESLK-LLNWGAQILVIGFASGEIPVIPA-NI---------------  264 (347)
Q Consensus       228 ~~g~~--------------------------~~~~~~~-~l~~~G~~v~~g~~~~~~~~~~~-~~---------------  264 (347)
                      ++|..                          ..+.++. +.+.+|+++.++...+....... ..               
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA  161 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALA  161 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            98731                          0112222 33567999998765432221111 10               


Q ss_pred             -hhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCc-ceeEEEEeCC
Q 019049          265 -ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV-IGKVMIAFDD  339 (347)
Q Consensus       265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~~~  339 (347)
                       -+.+++++.....+.......   .+..++..+.       .+..+.-..+|+-++..++.+... .|.. +.+|.
T Consensus       162 ~ela~~IrVN~I~PG~i~t~~~---~~~~~~~~~~-------~Pl~R~g~pediA~~v~fL~s~~~iTG~~-i~VDG  227 (247)
T 3ged_A          162 MSLGPDVLVNCIAPGWINVTEQ---QEFTQEDCAA-------IPAGKVGTPKDISNMVLFLCQQDFITGET-IIVDG  227 (247)
T ss_dssp             HHHTTTSEEEEEEECSBCCCC------CCHHHHHT-------STTSSCBCHHHHHHHHHHHHHCSSCCSCE-EEEST
T ss_pred             HHHCCCCEEEEEecCcCCCCCc---HHHHHHHHhc-------CCCCCCcCHHHHHHHHHHHHhCCCCCCCe-EEECc
Confidence             123467766666554332211   1112222211       122334467888888888876543 4443 44444

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.94  E-value=0.00014  Score=62.47  Aligned_cols=107  Identities=21%  Similarity=0.349  Sum_probs=66.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HH----HHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IK----FLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++ .+    .+++.|....+...+..-.+.++...+..  ..++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999987653 22    22344533222111111112222222211  1247


Q ss_pred             ccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeecCC
Q 019049          222 VDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       222 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +|++++++|..                          ..+.++..++..|+++.++...+
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            89999998841                          01233455567799999976543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.91  E-value=9.3e-05  Score=64.12  Aligned_cols=93  Identities=19%  Similarity=0.274  Sum_probs=72.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.+++|+|+|+ |.+|..+++.++..|++|++.+++.++.+.+.++|+. .++..  +    ..+.   .  ...|+|+.
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~~--~----l~~~---l--~~aDvVi~  221 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHTD--E----LKEH---V--KDIDICIN  221 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEGG--G----HHHH---S--TTCSEEEE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEchh--h----HHHH---h--hCCCEEEE
Confidence            36889999999 9999999999999999999999998887777777764 22211  1    2222   2  47899999


Q ss_pred             CCCccch-HHHHhccccCCEEEEEeec
Q 019049          228 PVGGKLT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       228 ~~g~~~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      +++...+ ...+..+++++.++.++..
T Consensus       222 ~~p~~~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          222 TIPSMILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CCSSCCBCHHHHTTSCTTCEEEECSST
T ss_pred             CCChhhhCHHHHHhCCCCCEEEEEeCC
Confidence            9997554 5678899999999988754

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.91  E-value=0.00099  Score=56.14  Aligned_cols=178  Identities=17%  Similarity=0.207  Sum_probs=101.2

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC--cEEEeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--DHVVDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~--~~v~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .|++++|+|++|  ++|.+.++.+...|++|+++.+++++.+.+.    +.+.  ...+..+-.+ .+++++..+..  .
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            588999999866  8999999999999999999999887665553    3342  2222222111 12233332221  1


Q ss_pred             CCcccEEEeCCCcc-----------c----h---------------HHHHhccccCCEEEEEeecCCCCCCcchh-----
Q 019049          219 LKGVDVLYDPVGGK-----------L----T---------------KESLKLLNWGAQILVIGFASGEIPVIPAN-----  263 (347)
Q Consensus       219 ~~~~d~v~d~~g~~-----------~----~---------------~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-----  263 (347)
                      .+++|++++++|..           .    +               ......++.+|+++.++...+........     
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~as  163 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVA  163 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHHH
Confidence            25799999988731           0    0               11234667889999998665432221111     


Q ss_pred             -------------HhhhcceEEEEEEeccccccCc---hhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcC
Q 019049          264 -------------IALVKNWTVHGLYWGSYKIHRP---HVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  327 (347)
Q Consensus       264 -------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~  327 (347)
                                   .+..+++++.....+.......   ....+.++++.+..       +..+.-..+|+-++.-++.+.
T Consensus       164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~-------Pl~R~g~peevA~~v~fL~Sd  236 (256)
T 4fs3_A          164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERA-------PLKRNVDQVEVGKTAAYLLSD  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS-------TTSSCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcC-------CCCCCcCHHHHHHHHHHHhCc
Confidence                         1235577777776654322111   11123333333322       222334678888888888754


Q ss_pred             C---cceeEE
Q 019049          328 K---VIGKVM  334 (347)
Q Consensus       328 ~---~~gk~v  334 (347)
                      .   ..|..+
T Consensus       237 ~a~~iTG~~i  246 (256)
T 4fs3_A          237 LSSGVTGENI  246 (256)
T ss_dssp             GGTTCCSCEE
T ss_pred             hhcCccCCEE
Confidence            3   355444

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.86  E-value=0.00012  Score=61.53  Aligned_cols=82  Identities=22%  Similarity=0.377  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +|++++|+|+++++|.+.++.+...|++|+++++++++.+.+    ++.|.......-+..-.++++++.+..  ..+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999999999999999999999876554    345644332222222222233333322  12579


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++++++|
T Consensus        86 DiLVNNAG   93 (254)
T 4fn4_A           86 DVLCNNAG   93 (254)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.86  E-value=0.0001  Score=61.94  Aligned_cols=82  Identities=22%  Similarity=0.349  Sum_probs=58.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .++++|||+|++|++|...++.+...|++|++++++.++.+.+. ++.....+...+..-.+...++.+..  +++|+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li   89 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILV   89 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            46889999999999999999999999999999999988776664 34433333322322223344444433  4799999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        90 ~~Ag~   94 (249)
T 3f9i_A           90 CNAGI   94 (249)
T ss_dssp             ECCC-
T ss_pred             ECCCC
Confidence            99883

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.86  E-value=0.00014  Score=61.22  Aligned_cols=83  Identities=22%  Similarity=0.163  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|++++|+|+++++|.+.++.+...|++|++++++.++.+..    ++.|.....-.-+..-.++++++.+..  ..+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            689999999999999999999999999999999998876544    344544333222222223344444332  34579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        88 DiLVNNAG~   96 (255)
T 4g81_D           88 DILINNAGI   96 (255)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999984

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.85  E-value=8.5e-05  Score=66.63  Aligned_cols=93  Identities=18%  Similarity=0.206  Sum_probs=73.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|+.. .     +    .++..     ...|+++
T Consensus       244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v-----~----LeElL-----~~ADIVv  307 (464)
T 3n58_A          244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-V-----T----LDDAA-----STADIVV  307 (464)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-C-----C----HHHHG-----GGCSEEE
T ss_pred             cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-c-----c----HHHHH-----hhCCEEE
Confidence            458999999999 99999999999999999999999887666666667542 1     1    22222     3679999


Q ss_pred             eCCCcc-ch-HHHHhccccCCEEEEEeecCC
Q 019049          227 DPVGGK-LT-KESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       227 d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      .++|.. .+ ...+..|++++.++.+|....
T Consensus       308 ~atgt~~lI~~e~l~~MK~GAILINvGRgdv  338 (464)
T 3n58_A          308 TTTGNKDVITIDHMRKMKDMCIVGNIGHFDN  338 (464)
T ss_dssp             ECCSSSSSBCHHHHHHSCTTEEEEECSSSTT
T ss_pred             ECCCCccccCHHHHhcCCCCeEEEEcCCCCc
Confidence            999874 33 688999999999998875543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.84  E-value=0.00014  Score=66.42  Aligned_cols=90  Identities=24%  Similarity=0.324  Sum_probs=71.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.|++++|.|+ |++|..+++.++..|++|+++++++.+...+...|++ +.+.  .+.            ...+|++++
T Consensus       263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~l--ee~------------~~~aDvVi~  326 (488)
T 3ond_A          263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTL--EDV------------VSEADIFVT  326 (488)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCG--GGT------------TTTCSEEEE
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCH--HHH------------HHhcCEEEe
Confidence            47899999999 7999999999999999999999999888777777753 2111  111            246899999


Q ss_pred             CCCc-cch-HHHHhccccCCEEEEEeec
Q 019049          228 PVGG-KLT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       228 ~~g~-~~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      +.|. ..+ ...+..+++++.++.+|..
T Consensus       327 atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          327 TTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             CCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            9986 444 5588999999999888754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.83  E-value=0.00013  Score=62.89  Aligned_cols=81  Identities=23%  Similarity=0.304  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++++|+|++|++|..+++.+...|++|++++++.++.+.+. +++....+..-+..-.+.++++.+..  +++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            5789999999999999999999999999999999998877665 34432222112222223344554444  47999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        93 nAg~   96 (291)
T 3rd5_A           93 NAGI   96 (291)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9883

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.83  E-value=0.00016  Score=59.52  Aligned_cols=99  Identities=15%  Similarity=0.076  Sum_probs=65.6

Q ss_pred             CEEEEecCCchHHHHHHHHHH-HcCCEEEEEecChh-hHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAE-KIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~-~~g~~V~~~~~~~~-~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++|||+|++|++|..+++.+. ..|++|++++++++ +.+.+...+. ..++..+-.+    .+.+.+..  .++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~--~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN----PGXLEQAV--TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC----HHHHHHHH--TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC----HHHHHHHH--cCCCEEEE
Confidence            579999999999999998888 89999999999988 6655532222 2222222112    22333333  37899999


Q ss_pred             CCCccc--hHHHHhccccC--CEEEEEeecCC
Q 019049          228 PVGGKL--TKESLKLLNWG--AQILVIGFASG  255 (347)
Q Consensus       228 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~  255 (347)
                      ++|...  ...++..++..  |+++.++....
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            998622  34455555443  58998876543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.81  E-value=0.0041  Score=53.52  Aligned_cols=106  Identities=19%  Similarity=0.221  Sum_probs=68.5

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|  ++|..+++.+...|++|++++++.+..+.+    ++.+....+..+-.+. +.++++.+..  ..+
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDA-ESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            578999999986  999999999999999999999987544433    3344333333222221 2233333322  124


Q ss_pred             cccEEEeCCCccc------------------------------hHHHHhccccCCEEEEEeecCC
Q 019049          221 GVDVLYDPVGGKL------------------------------TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       221 ~~d~v~d~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      ++|++++++|...                              .+.++..++.+|+++.++....
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            7999999987310                              1223345667899999986543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.79  E-value=0.00022  Score=61.90  Aligned_cols=81  Identities=16%  Similarity=0.216  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCC--cEEE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGV--DHVV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~--~~v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+    ++.+.  ...+  |..+.  .+.++.+.+..  .
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~--~~~v~~~~~~~~~~   88 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP--IATMSSLADFIKTH   88 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC--HHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc--HHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999998875443    22221  1222  33332  12233333321  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++|+++|.
T Consensus        89 ~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 FGKLDILVNNAGV  101 (311)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2479999999984

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.78  E-value=0.00035  Score=59.45  Aligned_cols=106  Identities=20%  Similarity=0.339  Sum_probs=66.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHH----HHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKF----LKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|+++++|.++++.+...|++|++++++ .++.+.    +++.|....+..-+..-.+.++++.+..  ..++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999997764 333332    2334533222211211112233333221  1247


Q ss_pred             ccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeecC
Q 019049          222 VDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       222 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +|++++++|..                          ..+.++..++++|+++.++...
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            89999998841                          1133455677799999997654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.78  E-value=0.00023  Score=54.09  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=68.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      .++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++.|...+. .+..+     .+.++..+-..+|+++.++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~-gd~~~-----~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL-GNAAN-----EEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-SCTTS-----HHHHHHTTGGGCSEEEECC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE-CCCCC-----HHHHHhcCcccCCEEEEEC
Confidence            468999999 9999999999999999999999999999999888876443 22221     2234444456899999999


Q ss_pred             Cccch----HHHHhccccCCEEEEE
Q 019049          230 GGKLT----KESLKLLNWGAQILVI  250 (347)
Q Consensus       230 g~~~~----~~~~~~l~~~G~~v~~  250 (347)
                      +++..    -...+.+.+..+++..
T Consensus        80 ~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEEE
Confidence            97432    2234455566666543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.76  E-value=0.00029  Score=60.67  Aligned_cols=105  Identities=23%  Similarity=0.266  Sum_probs=66.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHH----HHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKF----LKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .|+++||+|+++++|..+++.+...|++|++++++.++ .+.    .++.|....+..-+..-.+.++++.+..  ..++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999987653 222    2334533322111211112233332221  1247


Q ss_pred             ccEEEeCCCcc---------------------------chHHHHhccccCCEEEEEeec
Q 019049          222 VDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       222 ~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +|++++++|..                           ..+.++..++.+|+++.++..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            99999998731                           112334566778999988754

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.76  E-value=0.00015  Score=60.79  Aligned_cols=83  Identities=30%  Similarity=0.286  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +++.....-.-+..-.+.++++.+..  ..+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5789999999999999999999999999999999988766553 45543322222222222233333221  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.75  E-value=0.00045  Score=58.81  Aligned_cols=105  Identities=22%  Similarity=0.355  Sum_probs=66.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|+++++|.++++.+...|++|++++++. ++.+.+    ++.|.... +..+-.+ .+.+++..+..  ..+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD-AEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999986543 433332    33453322 2222212 12233332211  124


Q ss_pred             cccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeecC
Q 019049          221 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       221 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      ++|++++++|..                          ..+.++..++..|+++.++...
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            799999998831                          1123345677789999987643

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.75  E-value=0.00029  Score=56.15  Aligned_cols=94  Identities=18%  Similarity=0.218  Sum_probs=66.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d~v~d  227 (347)
                      +++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.+++.|...+. .+..+    .+ .+... +..++|+++.
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~-gd~~~----~~-~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVIS-GDATD----PD-FWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEE-CCTTC----HH-HHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEE-cCCCC----HH-HHHhccCCCCCCEEEE
Confidence            568999998 99999999999998 99999999999999988888876443 22111    12 22222 4567999999


Q ss_pred             CCCccc-hHHH---HhccccCCEEEEE
Q 019049          228 PVGGKL-TKES---LKLLNWGAQILVI  250 (347)
Q Consensus       228 ~~g~~~-~~~~---~~~l~~~G~~v~~  250 (347)
                      ++++.. ...+   .+.+.+...++..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            998743 2222   3344445566553

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.74  E-value=0.00023  Score=60.53  Aligned_cols=80  Identities=18%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecChhh-HHHHH-hcCCc-EEE--eCCCCCchhhHHHHHH----Hh
Q 019049          149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLK-SLGVD-HVV--DLSNESVIPSVKEFLK----AR  217 (347)
Q Consensus       149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~~~-~~g~~-~v~--~~~~~~~~~~~~~~~~----~~  217 (347)
                      .+++++|+|+  ++++|..+++.+...|++|++++++.++ .+.+. +++.. ..+  |..+.   +.++++.+    ..
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE---EHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCH---HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCH---HHHHHHHHHHHHHh
Confidence            5789999998  8999999999999999999999998765 24443 34422 122  33322   22333332    22


Q ss_pred             c-CCcccEEEeCCCc
Q 019049          218 K-LKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~-~~~~d~v~d~~g~  231 (347)
                      + ..++|++++++|.
T Consensus        83 g~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGF   97 (269)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             CCCCCceEEEECCcc
Confidence            1 1279999999873

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.73  E-value=0.0002  Score=60.82  Aligned_cols=82  Identities=22%  Similarity=0.297  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+.. .|++|++++++.++.+.+    +..+.. .++..+-.+. +.++.+.+..  ..+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            578999999999999999988888 899999999987765443    222422 2222222121 1223222211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|+++|.
T Consensus        82 ~id~li~~Ag~   92 (276)
T 1wma_A           82 GLDVLVNNAGI   92 (276)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.70  E-value=0.0005  Score=58.96  Aligned_cols=105  Identities=22%  Similarity=0.201  Sum_probs=65.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHH----HhcCCcEEEeCCCCCchhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~------------~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .++++||+|+++++|..+++.+...|++|++++++            .++.+.+    +..+....+..-+..-.+.+++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            57899999999999999999999999999999886            4433332    3344332221111111122333


Q ss_pred             HHHHh--cCCcccEEEeCCCcc------------------------chHHHHhccccCCEEEEEeec
Q 019049          213 FLKAR--KLKGVDVLYDPVGGK------------------------LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       213 ~~~~~--~~~~~d~v~d~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +.+..  ..+++|++++++|..                        ..+.++..++.+|+++.++..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence            22221  124799999998841                        012334466778999998753

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.69  E-value=0.00028  Score=58.95  Aligned_cols=80  Identities=25%  Similarity=0.282  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++....++..+-.+. +.+++..+  ..+++|++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~--~~~~id~vi~   82 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALG--SVGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHT--TCCCCCEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-HHHHHHHH--HcCCCCEEEE
Confidence            5789999999999999999999999999999999988766553 332223332222221 22333332  2346899999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        83 ~Ag~   86 (244)
T 3d3w_A           83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9883

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.68  E-value=0.00023  Score=60.23  Aligned_cols=83  Identities=24%  Similarity=0.308  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++....+..-+..-.+.+++..+..  ..+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999999999999999999999999999998776654 45533222111211112233333221  12478999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.67  E-value=0.0012  Score=56.61  Aligned_cols=96  Identities=18%  Similarity=0.113  Sum_probs=64.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|||+|++|.+|..+++.+... |++|+++++++++...+...+... +..+-.+    .+.+....  .++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~-~~~D~~d----~~~l~~~~--~~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSV-RQLDYFN----QESMVEAF--KGMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEE-EECCTTC----HHHHHHHT--TTCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEE-EEcCCCC----HHHHHHHH--hCCCEEEEeCC
Confidence            5999999999999999888877 899999999988655444444432 2222111    23333333  47899999988


Q ss_pred             cc--------chHHHHhccccC--CEEEEEeecC
Q 019049          231 GK--------LTKESLKLLNWG--AQILVIGFAS  254 (347)
Q Consensus       231 ~~--------~~~~~~~~l~~~--G~~v~~g~~~  254 (347)
                      ..        ....+++.++..  ++++.++...
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            52        123455555544  4888887654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.67  E-value=0.00021  Score=60.74  Aligned_cols=83  Identities=30%  Similarity=0.404  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++....+-..+..-.+.++++.+..  ..+++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999999998877655 345643322212222122233333321  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.67  E-value=0.00026  Score=59.92  Aligned_cols=105  Identities=17%  Similarity=0.235  Sum_probs=64.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh---hHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE---KIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|+++++|.++++.+...|++|+++.++..   +.+.+    +..|....+..-+..-.++++++.+..  ..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999876533   33322    223433222111211122233333321  12


Q ss_pred             CcccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeec
Q 019049          220 KGVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       220 ~~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +++|++++++|..                          ..+.++..++..|+++.++..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            4799999999831                          012233455678999988643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.67  E-value=0.00023  Score=60.84  Aligned_cols=83  Identities=19%  Similarity=0.248  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +++.......-+..-.+.++++.+..  ..+++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988766554 45533222111111112233333221  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus       106 v~nAg~  111 (277)
T 4dqx_A          106 VNNAGF  111 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999983

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.66  E-value=0.00025  Score=59.97  Aligned_cols=82  Identities=22%  Similarity=0.293  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++... .+..+-.+ .+.+++..+..  ..+++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999988766553 455332 22222111 12233332211  2347999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        86 lv~~Ag~   92 (259)
T 4e6p_A           86 LVNNAAL   92 (259)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.66  E-value=0.00029  Score=58.51  Aligned_cols=97  Identities=23%  Similarity=0.243  Sum_probs=67.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEE-eCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVV-DLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+.+|||+|++|.+|..+++.+...|++|+++++++++.+.+...++ ..+. |.. ..+       .+..  .++|++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~-------~~~~--~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDF-------SHAF--ASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCC-------GGGG--TTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHH-------HHHH--cCCCEEE
Confidence            47799999999999999999999999999999999998887777666 3322 222 222       1111  4799999


Q ss_pred             eCCCccc--------------hHHHHhcccc--CCEEEEEeecCC
Q 019049          227 DPVGGKL--------------TKESLKLLNW--GAQILVIGFASG  255 (347)
Q Consensus       227 d~~g~~~--------------~~~~~~~l~~--~G~~v~~g~~~~  255 (347)
                      +++|...              ...+++.++.  .++++.++....
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            9998521              1223333332  368998876543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.66  E-value=0.00032  Score=59.75  Aligned_cols=83  Identities=17%  Similarity=0.212  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh---cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR---KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~---~~~~  221 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+.    +.|........+..-.+.++.+.+..   -.++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999987665442    23433221111111112233333221   1157


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999884

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.65  E-value=0.00026  Score=59.92  Aligned_cols=80  Identities=30%  Similarity=0.475  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVDH-VV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~~-v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++    +... .+  |..+.   +.+++..+..  .
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP---EGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSH---HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH---HHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999987665442 22    4322 22  22222   2233332211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        83 ~g~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FGGADILVNNAGT   95 (263)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999883

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.65  E-value=0.00021  Score=60.65  Aligned_cols=83  Identities=28%  Similarity=0.386  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+.    +.|.......-+..-.+.++.+.+..  ..+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988765543    23433222111111112233333221  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.65  E-value=0.0002  Score=60.25  Aligned_cols=83  Identities=24%  Similarity=0.223  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh-cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d  223 (347)
                      .++++||+|+++++|.+.++.+...|++|++++++.++.+.+.    +.|....+..-+..-.+.++.+.+.. ..+++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            5789999999999999999999999999999999988765443    23432222111111112233333221 115799


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.65  E-value=0.00032  Score=59.31  Aligned_cols=79  Identities=23%  Similarity=0.368  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+.    +.|... .+  |..+.   +.++...+..  ..
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR---SERQELMNTVANHF   84 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH---HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH---HHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999987665432    234322 22  22221   2233333221  11


Q ss_pred             -CcccEEEeCCC
Q 019049          220 -KGVDVLYDPVG  230 (347)
Q Consensus       220 -~~~d~v~d~~g  230 (347)
                       +++|++++++|
T Consensus        85 ~g~id~lv~~Ag   96 (260)
T 2ae2_A           85 HGKLNILVNNAG   96 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             47999999988

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.65  E-value=0.00024  Score=59.87  Aligned_cols=80  Identities=23%  Similarity=0.290  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-EE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+. +++... .+  |..+.   +.++...+..  ..+++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE---EDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH---HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCH---HHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988766553 444322 22  22222   2233332211  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        81 D~lv~nAg~   89 (254)
T 1hdc_A           81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.64  E-value=0.00032  Score=59.33  Aligned_cols=81  Identities=20%  Similarity=0.236  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|+++++|.++++.+...|++|+++ .++.++.+..    ++.|.. ..+..+-.+ .++++++.+..  ..+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN-AAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999998 4444443332    334432 222222111 12233333221  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      ++|++++++|
T Consensus        86 ~id~lv~nAg   95 (259)
T 3edm_A           86 EIHGLVHVAG   95 (259)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.64  E-value=0.00056  Score=58.02  Aligned_cols=82  Identities=23%  Similarity=0.277  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|+|++|++|...++.+...|++|++++++.++.+.+. ++     +.. ..+..+-.+ .+.++...+..  ..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999887655432 22     211 122222111 11233332221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        85 g~id~lv~~Ag~   96 (267)
T 2gdz_A           85 GRLDILVNNAGV   96 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            478999999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.63  E-value=0.00036  Score=59.22  Aligned_cols=80  Identities=23%  Similarity=0.392  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCcE-EE--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVDH-VV--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~~-v~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++     +... .+  |..+.   +.++++.+..  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~   88 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE---AQVEAYVTATTE   88 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH---HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH---HHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987665442 21     4322 22  22222   2233333211  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+++|++++++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (267)
T 1iy8_A           89 RFGRIDGFFNNAGI  102 (267)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            12479999999873

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.63  E-value=0.00021  Score=59.48  Aligned_cols=167  Identities=17%  Similarity=0.183  Sum_probs=97.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+......+. ...|..+   .+.++++.+..  +++|++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~--g~iDiLVN   84 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITD---SQRLQRLFEAL--PRLDVLVN   84 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTC---HHHHHHHHHHC--SCCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCC---HHHHHHHHHhc--CCCCEEEE
Confidence            699999999999999999999999999999999988765432211111 1122222   23466666554  57999999


Q ss_pred             CCCcc------------------------chHHHHhccc-cCCEEEEEeecCCCCCCcc---hh---------------H
Q 019049          228 PVGGK------------------------LTKESLKLLN-WGAQILVIGFASGEIPVIP---AN---------------I  264 (347)
Q Consensus       228 ~~g~~------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~---~~---------------~  264 (347)
                      ++|-.                        ..+.++.+|+ .+|++|.++...+......   +.               .
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~E  164 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACE  164 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99831                        0122333554 5799999986543222111   11               1


Q ss_pred             hhhcceEEEEEEeccccccCchh---HHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcC
Q 019049          265 ALVKNWTVHGLYWGSYKIHRPHV---LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  327 (347)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~  327 (347)
                      +-.+++++.....+.........   ..+..+++.+   .    .+..+.-..+|+-++.-++.+.
T Consensus       165 la~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~---~----~PlgR~g~peeiA~~v~fLaSd  223 (242)
T 4b79_A          165 YAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQ---R----TPLARWGEAPEVASAAAFLCGP  223 (242)
T ss_dssp             HGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHH---T----CTTCSCBCHHHHHHHHHHHTSG
T ss_pred             hhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHh---c----CCCCCCcCHHHHHHHHHHHhCc
Confidence            33557777776655433211100   0122222222   1    1222334578888888887754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.63  E-value=0.0005  Score=58.71  Aligned_cols=80  Identities=31%  Similarity=0.423  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC--c-EEE--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--D-HVV--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~--~-~v~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.|.  . .++  |..+.   +.++++.+..  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~  107 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE---EDILSMFSAIRS  107 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH---HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH---HHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987665442    2332  1 122  22222   1233322211  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+++|++|+++|.
T Consensus       108 ~~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          108 QHSGVDICINNAGL  121 (279)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             hCCCCCEEEECCCC
Confidence            12479999999883

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.63  E-value=9.2e-05  Score=61.12  Aligned_cols=88  Identities=22%  Similarity=0.298  Sum_probs=62.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .++++||+|+++++|...++.+...|++|++++++.+             .|..+.+   .+++..+..  +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~~---~v~~~~~~~--g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDEK---SVYHYFETI--GAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCHH---HHHHHHHHH--CSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCHH---HHHHHHHHh--CCCCEEEEC
Confidence            4679999999999999999999889999999998654             2333322   244444443  578999998


Q ss_pred             CCcc---------------------------chHHHHhccccCCEEEEEeecC
Q 019049          229 VGGK---------------------------LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       229 ~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +|..                           ..+.++..++++|+++.++...
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~  119 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGML  119 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchh
Confidence            8831                           1122344666789999987654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.63  E-value=0.00027  Score=61.18  Aligned_cols=82  Identities=22%  Similarity=0.295  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+... .+..+-.+ .+.++++.+..  ..++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence            6789999999999999999999999999999999988766543    234332 22222111 12233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.63  E-value=0.00049  Score=58.13  Aligned_cols=82  Identities=22%  Similarity=0.364  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----C-CcEEEeCCCCCchhhHHHHHHHh-cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----G-VDHVVDLSNESVIPSVKEFLKAR-KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g-~~~v~~~~~~~~~~~~~~~~~~~-~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+. ++     + ....+..+-.+. +.++...+.. ...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP-GDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH-HHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH-HHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999987665442 22     3 122222221111 2233333221 112


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        85 gid~lv~~Ag~   95 (260)
T 2z1n_A           85 GADILVYSTGG   95 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            39999999883

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.63  E-value=0.00025  Score=59.87  Aligned_cols=81  Identities=17%  Similarity=0.307  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+.+    .+.. ..+..+-.+ .+.++++.+..  ..++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887766542    2322 222222111 12233333221  1247


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++++++|
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.62  E-value=0.00028  Score=60.42  Aligned_cols=83  Identities=24%  Similarity=0.318  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +++.....-.-+..-.+.++.+.+..  ..+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999999999999999999999999999988776654 44433222111211112233332221  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999883

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.62  E-value=0.00087  Score=57.77  Aligned_cols=107  Identities=24%  Similarity=0.262  Sum_probs=67.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.+  +.+.+    ++.|....+...+..-.+.++.+.+..  ..+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999887632  22222    334543332222222222233333221  124


Q ss_pred             cccEEEeCCCcc---------------------------chHHHHhccccCCEEEEEeecCC
Q 019049          221 GVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       221 ~~d~v~d~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      ++|++++++|..                           ..+.++..++++|+++.++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            799999998841                           01223456777899999876543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.62  E-value=0.00054  Score=57.34  Aligned_cols=82  Identities=23%  Similarity=0.342  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEE-EeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|+|++|++|...++.+...|++|++++++.++.+.+.    +.+.... +..+-.+ .+.++++.+..  ..++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999988665543    3343322 2222112 22233333322  2357


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.62  E-value=0.00014  Score=60.70  Aligned_cols=170  Identities=18%  Similarity=0.124  Sum_probs=97.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCcEEE---eCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVV---DLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~~v~---~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .|++++|+|+++++|.+.++.+...|++|++++++..  ..+.+++.|.....   |..+...   .+.   ....+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~---~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKD---SFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTT---SSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHH---HHHhCCCC
Confidence            5889999999999999999999999999999998753  34555666643222   3333222   221   12346799


Q ss_pred             EEEeCCCcc--------------------------chHHHHhcc-c--cCCEEEEEeecCCCCCCcc---hh--------
Q 019049          224 VLYDPVGGK--------------------------LTKESLKLL-N--WGAQILVIGFASGEIPVIP---AN--------  263 (347)
Q Consensus       224 ~v~d~~g~~--------------------------~~~~~~~~l-~--~~G~~v~~g~~~~~~~~~~---~~--------  263 (347)
                      ++++++|..                          ..+.++..| +  .+|++|.++...+......   +.        
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~  161 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAG  161 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHH
Confidence            999999841                          112223333 3  3689999986543222111   11        


Q ss_pred             -------HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC
Q 019049          264 -------IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK  328 (347)
Q Consensus       264 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~  328 (347)
                             .+-.+++++.....+.......+..... +...+.+.+.   .+..+.-..+|+-.+.-++.+..
T Consensus       162 ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~-~~~~~~~~~~---~PlgR~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          162 LTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD-AARNKAILER---IPAGRWGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-HHHHHHHHTT---CTTSSCBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC-HHHHHHHHhC---CCCCCCcCHHHHHHHHHHHhCch
Confidence                   1345678887777655432211111111 1111111111   12333446788988888887543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.62  E-value=0.00042  Score=57.84  Aligned_cols=78  Identities=27%  Similarity=0.354  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c-CCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L-GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.+ . +. .++..+-.+ .+.+++..+  ..+.+|+++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~--~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGI-EPVCVDLGD-WDATEKALG--GIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTC-EEEECCTTC-HHHHHHHHT--TCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCC-CcEEecCCC-HHHHHHHHH--HcCCCCEEE
Confidence            56799999999999999999999999999999999877665543 3 33 233222112 122333332  234689999


Q ss_pred             eCCC
Q 019049          227 DPVG  230 (347)
Q Consensus       227 d~~g  230 (347)
                      +++|
T Consensus        82 ~~Ag   85 (244)
T 1cyd_A           82 NNAA   85 (244)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9988

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.61  E-value=0.00033  Score=58.72  Aligned_cols=82  Identities=30%  Similarity=0.481  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.    ..|.. ..+..+-.+ .+.++...+..  ..++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999987765443    23432 222222111 12233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        85 id~lv~nAg~   94 (247)
T 2jah_A           85 LDILVNNAGI   94 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.61  E-value=0.00022  Score=59.39  Aligned_cols=81  Identities=16%  Similarity=0.065  Sum_probs=54.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      ++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+-.+ .+.+++..+..  ..+++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcEE
Confidence            578999999999999999999999999999999988776654 33322 122221111 12233333221  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        82 vnnAg~   87 (235)
T 3l6e_A           82 LHCAGT   87 (235)
T ss_dssp             EEECCC
T ss_pred             EECCCC
Confidence            999884

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.61  E-value=0.00031  Score=60.11  Aligned_cols=85  Identities=20%  Similarity=0.293  Sum_probs=53.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +..++++||+|+++++|.++++.+...|++|++++++.++.+.+.    +.|....+..-+..-.+.+++..+..  ..+
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999999988765442    23433222111211112233332221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       101 ~id~lv~nAg~  111 (279)
T 3sju_A          101 PIGILVNSAGR  111 (279)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999884

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.61  E-value=0.00023  Score=59.82  Aligned_cols=80  Identities=31%  Similarity=0.471  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EE--EeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HV--VDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|+++++|...++.+...|++|++++++.++.+.+. +++.. ..  .|..+.   +.++++.+..  ..+++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNP---ESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH---HHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCH---HHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999988776554 33322 12  233332   2233333221  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.61  E-value=0.00032  Score=59.56  Aligned_cols=80  Identities=29%  Similarity=0.424  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVDH-VV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~~~-v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +    .|... .+  |..+.   +.++...+..  .
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~   96 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY---EEVKKLLEAVKEK   96 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH---HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCH---HHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987665432 2    24332 22  22222   2233332211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        97 ~g~iD~lvnnAg~  109 (267)
T 1vl8_A           97 FGKLDTVVNAAGI  109 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999884

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.61  E-value=0.00032  Score=58.85  Aligned_cols=82  Identities=22%  Similarity=0.259  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHH-HHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIK-FLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~-~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++ ++.+ .+++.|... .+..+-.+ .+.+++..+..  ..+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987 5544 344555332 22222111 12233332211  124799


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus        85 ~lv~nAg~   92 (249)
T 2ew8_A           85 ILVNNAGI   92 (249)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.60  E-value=0.00044  Score=58.69  Aligned_cols=81  Identities=19%  Similarity=0.237  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hc--CCcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SL--GVDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      .++++||+|+++++|...++.+...|++|++++++.++.+...    +.  +........+..-.+.++++.+..  +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY--PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC--CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc--CCC
Confidence            5789999999999999999999999999999999987655442    22  222111112222223344554433  579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.60  E-value=0.00046  Score=58.31  Aligned_cols=81  Identities=25%  Similarity=0.305  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h---cCCcE-EEeCCCCCchhhHHHHHHHh---cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDH-VVDLSNESVIPSVKEFLKAR---KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~---~g~~~-v~~~~~~~~~~~~~~~~~~~---~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +   .|... .+..+ ..-.+.++...+..   ..+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD-SSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECC-TTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECC-CCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999887665442 2   24322 22221 11122233433332   135


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999994

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.60  E-value=0.00026  Score=60.64  Aligned_cols=82  Identities=21%  Similarity=0.366  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc---CCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---GVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~---g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. ++   +....+..-+..-.+.++.+.+..  ..+++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999988766553 22   332222112222222233333321  12479


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++++++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.59  E-value=0.00038  Score=59.00  Aligned_cols=104  Identities=15%  Similarity=0.284  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCch--HHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC--cEEE--eCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGG--VGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--DHVV--DLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~--~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~--~~v~--~~~~~~~~~~~~~~~~~~-  217 (347)
                      .++++||+|++|.  +|..+++.+...|++|++++++....+.++    +.+.  ..++  |..+.+   .++++.+.. 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~v~~~~~~~~   82 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDA---EIETCFASIK   82 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSH---HHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHH---HHHHHHHHHH
Confidence            5789999999954  999999999999999999998765444332    3332  2222  333322   233333221 


Q ss_pred             -cCCcccEEEeCCCcc------------------------------chHHHHhccccCCEEEEEeecCC
Q 019049          218 -KLKGVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       218 -~~~~~d~v~d~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                       ..+.+|++++++|..                              ..+.++..++++|+++.++....
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence             124789999998731                              11234456677899999986543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.59  E-value=0.00024  Score=60.56  Aligned_cols=83  Identities=17%  Similarity=0.290  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++.......-+..-.+.++++.+..  ..+++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988766553 45532222111111112233333221  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.59  E-value=0.00034  Score=58.80  Aligned_cols=82  Identities=22%  Similarity=0.272  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.+... .+..+-.+ .+.++.+.+..  ..++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD-PESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999988766543    234222 22222111 12233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.58  E-value=0.00044  Score=58.72  Aligned_cols=106  Identities=22%  Similarity=0.283  Sum_probs=63.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ..++++||+|+++++|.++++.+...|++|+++.. +.++.+.+    +..|.......-+..-.+.++++.+..  ..+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999998744 44444333    334433222111111112233333221  124


Q ss_pred             cccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeec
Q 019049          221 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       221 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      ++|++++++|..                          ..+.++..++.+|+++.++..
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            799999999831                          012334456678999998753

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.58  E-value=0.00035  Score=58.91  Aligned_cols=82  Identities=22%  Similarity=0.302  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.|... .+..+-.+ .+.++.+.+..  ..++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD-EQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999987665443    334332 22222111 12233332221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.58  E-value=0.00031  Score=60.01  Aligned_cols=82  Identities=22%  Similarity=0.328  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|+++++|...++.+...|++|++++++.++.+.+.    +.|.. ..+..+-.+ .+.++++.+..  ..++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ-PDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999887665442    23322 222222111 12233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.58  E-value=0.00042  Score=58.73  Aligned_cols=83  Identities=16%  Similarity=0.202  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|+++++|...++.+...|++|++++++.++.+.+.    +.|....+..-+..-.+.++++.+..  ..+++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6789999999999999999999999999999999988765543    23432222111111112233333221  13479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        90 d~lv~nAg~   98 (264)
T 3ucx_A           90 DVVINNAFR   98 (264)
T ss_dssp             SEEEECCCS
T ss_pred             cEEEECCCC
Confidence            999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.58  E-value=0.00061  Score=57.18  Aligned_cols=75  Identities=31%  Similarity=0.351  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.++++||+|++|++|..+++.+...|++|++++++++.   +++++....+ .+-   .+..+.+.+...  ++|++++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~-~D~---~~~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LKRSGHRYVV-CDL---RKDLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHTCSEEEE-CCT---TTCHHHHHHHSC--CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHhhCCeEEE-eeH---HHHHHHHHHHhc--CCCEEEE
Confidence            357899999999999999999999999999999998743   3344532222 211   222555555543  7999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        88 ~Ag~   91 (249)
T 1o5i_A           88 NAGG   91 (249)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9983

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.57  E-value=0.00054  Score=58.32  Aligned_cols=83  Identities=22%  Similarity=0.245  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|+++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.|....+..-+..-.+.+++..+..  ..+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999999999999999988765442    33433322222222222233333321  23479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.57  E-value=0.00052  Score=57.67  Aligned_cols=82  Identities=17%  Similarity=0.228  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--C--CcEEEeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--G--VDHVVDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g--~~~v~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+.+    .  +  ....+..+-.+. +.+++..+..  .
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC-TKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH-HHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999887665532    1  2  222222222221 1222222211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999984

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.57  E-value=0.00067  Score=57.91  Aligned_cols=82  Identities=27%  Similarity=0.419  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+    ++.|... .+..+-.+ .+.++.+.+..  ..++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999998765543    2234322 22222111 12233332221  1347


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       100 iD~lv~~Ag~  109 (277)
T 2rhc_B          100 VDVLVNNAGR  109 (277)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.57  E-value=0.00028  Score=60.30  Aligned_cols=82  Identities=20%  Similarity=0.307  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+-.+ .+.++++.+..  ..+++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999988766553 45432 222222111 12233332221  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus       107 lvnnAg~  113 (277)
T 3gvc_A          107 LVANAGV  113 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.56  E-value=0.00024  Score=59.02  Aligned_cols=81  Identities=26%  Similarity=0.336  Sum_probs=53.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-----hcCCcEE-EeCCCCCchhhHHHHHHHh--cCCc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-----SLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-----~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      ++++||+|++|++|...++.+...|++|++++++.++.+.+.     ..+.... +..+-.+. +.++++.+..  ..++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA-ESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCH-HHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999988765542     2343322 22221111 1122221111  1147


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        81 id~li~~Ag~   90 (235)
T 3l77_A           81 VDVVVANAGL   90 (235)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999884

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.56  E-value=0.00057  Score=61.39  Aligned_cols=90  Identities=17%  Similarity=0.214  Sum_probs=71.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|+..+      +    .++..     ...|+++.
T Consensus       209 L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------s----L~eal-----~~ADVVil  272 (436)
T 3h9u_A          209 IAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------L----VEDVV-----EEAHIFVT  272 (436)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------C----HHHHT-----TTCSEEEE
T ss_pred             ccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------C----HHHHH-----hhCCEEEE
Confidence            46899999999 999999999999999999999999887777777776432      2    22222     36899999


Q ss_pred             CCCcc-ch-HHHHhccccCCEEEEEeec
Q 019049          228 PVGGK-LT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       228 ~~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      +.+.. .+ ...+..|+++..++.++..
T Consensus       273 t~gt~~iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          273 TTGNDDIITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             CSSCSCSBCTTTGGGCCTTEEEEECSSS
T ss_pred             CCCCcCccCHHHHhhcCCCcEEEEeCCC
Confidence            88863 34 4788999999999887633

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.56  E-value=0.00029  Score=59.86  Aligned_cols=81  Identities=23%  Similarity=0.402  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCCcE-E--EeCCCCCc-hhhHHHHHHHhcC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVDH-V--VDLSNESV-IPSVKEFLKARKL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~~~-v--~~~~~~~~-~~~~~~~~~~~~~  219 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +    .+... .  .|..+.+. ....+++.+..  
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF--   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc--
Confidence            5789999999999999999999999999999999988765542 1    34322 2  23443332 11122233322  


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999883

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.56  E-value=0.0005  Score=58.14  Aligned_cols=83  Identities=28%  Similarity=0.356  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.|....+..-+..-.+.+..+.+..  ..+.+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999988765543    23432222111211112233332221  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999884

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.55  E-value=0.00055  Score=57.60  Aligned_cols=83  Identities=25%  Similarity=0.257  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||.|++|++|...++.+...|++|++++++.++.+.+. +++....+..-+..-.+.+++..+..  ..+.+|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999999988766553 44433222111211112233332221  12468999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.55  E-value=0.0004  Score=58.18  Aligned_cols=80  Identities=25%  Similarity=0.305  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.++.....+..+-.+ .+.++++.+..  +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK-KKQIDQFANEV--ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTC-HHHHHHHHHHC--SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCC-HHHHHHHHHHh--CCCCEEEEC
Confidence            478999999999999999999999999999999988766544433211222222111 12233333332  479999999


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      +|.
T Consensus        82 Ag~   84 (246)
T 2ag5_A           82 AGF   84 (246)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            883

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.55  E-value=0.00038  Score=57.65  Aligned_cols=80  Identities=13%  Similarity=0.222  Sum_probs=54.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++||.|++|++|..++..+...|++|++++++.++.+.+. +++....+...+..-.+.++.+.+... ..+|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLD-SIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCS-SCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHh-hcCCEEEEeC
Confidence            46999999999999999999999999999999998877665 344221111112222233455554443 2459999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      |.
T Consensus        81 g~   82 (230)
T 3guy_A           81 GS   82 (230)
T ss_dssp             CC
T ss_pred             Cc
Confidence            83

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.55  E-value=0.0002  Score=60.52  Aligned_cols=82  Identities=20%  Similarity=0.228  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|+++++|.+.++.+...|++|++++++.++.+... +++.. ..+..+-.+ .+.+++..+..  ..+++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-EADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999887665443 44422 222222111 12233333221  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        85 lv~nAg~   91 (257)
T 3tpc_A           85 LVNCAGT   91 (257)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.54  E-value=0.00044  Score=58.49  Aligned_cols=79  Identities=25%  Similarity=0.397  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.    +.|... .+  |..+.   +.++...+..  ..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE---EAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH---HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH---HHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999987665442    234322 22  22222   2222222211  12


Q ss_pred             CcccEEEeCCC
Q 019049          220 KGVDVLYDPVG  230 (347)
Q Consensus       220 ~~~d~v~d~~g  230 (347)
                      +++|++++++|
T Consensus        83 g~id~lv~nAg   93 (262)
T 1zem_A           83 GKIDFLFNNAG   93 (262)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.54  E-value=0.0012  Score=56.77  Aligned_cols=107  Identities=20%  Similarity=0.258  Sum_probs=68.2

Q ss_pred             CCCCEEEEecCCch--HHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          148 SSGQVLLVLGAAGG--VGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       148 ~~~~~VlI~g~~g~--~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      -.++++||+|++|+  +|.++++.+...|++|++++++++..+.+    ++.+....+..+-.+ .+.++.+.+..  ..
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD-AASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhc
Confidence            36789999999855  99999999999999999999986533333    234433333222222 12233333322  13


Q ss_pred             CcccEEEeCCCccc------------------------------hHHHHhccccCCEEEEEeecCC
Q 019049          220 KGVDVLYDPVGGKL------------------------------TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       220 ~~~d~v~d~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +++|++++++|...                              .+.++..++.+|+++.++....
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            47999999988311                              1223446667899999986543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.54  E-value=0.00044  Score=58.97  Aligned_cols=82  Identities=18%  Similarity=0.205  Sum_probs=53.1

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChh---hHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++  |++|..+++.+...|++|++++++.+   ..+.+. +.+....+..+-.+. +.++.+.+..  ..+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE-EHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            47899999998  99999999999999999999998865   333333 234222332222221 2233333221  134


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        84 ~id~lv~nAg~   94 (275)
T 2pd4_A           84 SLDFIVHSVAF   94 (275)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.54  E-value=0.00047  Score=58.63  Aligned_cols=82  Identities=18%  Similarity=0.289  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+. ++.....+..+-.+. +.+++..+..  ..+++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQE-DDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988766554 343222332222121 2233332211  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        87 v~nAg~   92 (270)
T 1yde_A           87 VNNAGH   92 (270)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.53  E-value=0.00047  Score=59.10  Aligned_cols=82  Identities=18%  Similarity=0.261  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++++||+|+++++|.++++.+...|++|++++++.++.+.+. +   .|... .+..+-.+. +.++++.+..  ..++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE-LQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999988766553 2   23222 222221111 2233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.53  E-value=0.00029  Score=62.24  Aligned_cols=83  Identities=19%  Similarity=0.324  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-----------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----------IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-----------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .|+++||+|+++++|.++++.+...|++|++++++.++           .+.+++.|....+..-+..-.++++++.+..
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999988763           2333445533222111111112233333322


Q ss_pred             --cCCcccEEEeCCCc
Q 019049          218 --KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 --~~~~~d~v~d~~g~  231 (347)
                        ..+++|++++++|.
T Consensus       124 ~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence              12479999999983

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.53  E-value=0.0004  Score=58.52  Aligned_cols=81  Identities=22%  Similarity=0.221  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH---HhcCCc-EEE--eCCCCCc-hhhHHHHHHHhcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL---KSLGVD-HVV--DLSNESV-IPSVKEFLKARKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~---~~~g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~~  221 (347)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+   .+.|.. ..+  |..+.+- ....+++.+..  ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~--G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF--GR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh--CC
Confidence            688999999999999999999999999999999987654433   334422 222  2222211 11122333322  57


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.52  E-value=0.00066  Score=51.41  Aligned_cols=76  Identities=25%  Similarity=0.388  Sum_probs=58.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      .++|+|.|+ |.+|..+++.+...|.+|+++++++++.+.+++.|...+ ..+..+     ...++..+..++|+++.++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~-~gd~~~-----~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAV-IADPTD-----ESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEE-ECCTTC-----HHHHHHSCCTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEE-ECCCCC-----HHHHHhCCcccCCEEEEec
Confidence            467999999 999999999999999999999999999988888776433 222221     1223333456799999999


Q ss_pred             Ccc
Q 019049          230 GGK  232 (347)
Q Consensus       230 g~~  232 (347)
                      ++.
T Consensus        79 ~~~   81 (141)
T 3llv_A           79 SDD   81 (141)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            964

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.52  E-value=0.00034  Score=58.51  Aligned_cols=82  Identities=32%  Similarity=0.357  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHhc-CCc-EEEeCCCCCchhhHHHHHH----HhcCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKSL-GVD-HVVDLSNESVIPSVKEFLK----ARKLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~~~~----~~~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|  ++|++++++.++.+.++++ +.. .++..+-.+ .+.++++.+    ..+..
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCC-HHHHHHHHHHHHHhcCCC
Confidence            36799999999999999999999999  9999999998877766655 322 222222111 122333322    22212


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|+++|.
T Consensus        81 ~id~li~~Ag~   91 (250)
T 1yo6_A           81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCcc
Confidence            69999999873

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.52  E-value=0.00043  Score=58.49  Aligned_cols=83  Identities=24%  Similarity=0.381  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHH-hc----CCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLK-SL----GVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~~~-~~----g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++ .+.+. ++    |....+..-+..-.+.++...+..  ..+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999998766 44332 22    433222112221112233333221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.52  E-value=0.00058  Score=57.81  Aligned_cols=80  Identities=28%  Similarity=0.373  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+. +++.. ..+  |..+.   +.+++..+..  ..+.+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP---KAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH---HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH---HHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988776554 44322 222  22222   2233322221  12478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        82 D~lvnnAg~   90 (263)
T 2a4k_A           82 HGVAHFAGV   90 (263)
T ss_dssp             CEEEEGGGG
T ss_pred             cEEEECCCC
Confidence            999999873

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.51  E-value=0.00052  Score=57.85  Aligned_cols=81  Identities=22%  Similarity=0.213  Sum_probs=53.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +++++|+|++|++|..+++.+...|++|+++++++++.+.+.    ..|.. ..+..+-.+ .+.+++..+..  ..+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999887665442    23432 222222111 12233333211  13479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        81 d~lv~nAg~   89 (256)
T 1geg_A           81 DVIVNNAGV   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.51  E-value=0.00052  Score=58.42  Aligned_cols=82  Identities=16%  Similarity=0.229  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+.    +.|.. .++..+-.+ .+.++++.+..  ..++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC-HHHHHHHHHHHHHHCCC
Confidence            5789999999999999999999999999999999887665442    23432 222222111 12233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999999883

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.51  E-value=0.00046  Score=58.28  Aligned_cols=83  Identities=25%  Similarity=0.275  Sum_probs=53.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      ..++++||+|++|++|..+++.+...|++|+++ .++.++.+.+.    +.|....+..-+..-.+.++++.+..  ..+
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999987 77776655442    33433222111211112233333221  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      ++|++++++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999997

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.51  E-value=0.0006  Score=57.54  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH---cCCEEEEEecChhhHHHHH-hc-----CCcE-EEeCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKV---CGATIIAVARGAEKIKFLK-SL-----GVDH-VVDLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~---~g~~V~~~~~~~~~~~~~~-~~-----g~~~-v~~~~~~~~~~~~~~~~~~~-  217 (347)
                      .++++||+|++|++|..+++.+..   .|++|++++++.++.+.+. ++     +... .+..+ ..-.+.++.+.+.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD-LGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECC-TTSHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecC-CCCHHHHHHHHHHHH
Confidence            467899999999999999988877   8999999999987765543 22     3221 22111 11122244444333 


Q ss_pred             ---cCCccc--EEEeCCC
Q 019049          218 ---KLKGVD--VLYDPVG  230 (347)
Q Consensus       218 ---~~~~~d--~v~d~~g  230 (347)
                         ..+.+|  ++++++|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence               234677  9999887

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.51  E-value=0.00039  Score=59.15  Aligned_cols=80  Identities=21%  Similarity=0.318  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.|.. ..+  |..+.   +.++.+.+..  ..
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA---TAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCH---HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCH---HHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999987665442    23322 222  33322   2233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus       104 g~iD~lvnnAg~  115 (270)
T 3ftp_A          104 GALNVLVNNAGI  115 (270)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.51  E-value=0.0005  Score=58.21  Aligned_cols=83  Identities=22%  Similarity=0.302  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhc---CCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARK---LKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~---~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.+....+...+..-.+.++.+.+...   +++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999999999999887655432    234332221112221122333332211   247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.51  E-value=0.00054  Score=57.53  Aligned_cols=82  Identities=20%  Similarity=0.279  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc--EEEeCCCCCchhhHHHHHHHh-cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD--HVVDLSNESVIPSVKEFLKAR-KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~~~~~~-~~~~~d~  224 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. +++..  ..+..+-.+. +.+++..+.. ..+++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDA-EAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCH-HHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCH-HHHHHHHHHHHhhCCCcE
Confidence            5689999999999999999999999999999999988765543 34432  2222221121 1223222211 1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999883

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.50  E-value=0.00049  Score=57.35  Aligned_cols=78  Identities=27%  Similarity=0.298  Sum_probs=54.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +++++|+|++|++|..+++.+...|++|+++++++++  ..+++|... ..|..+.+.....+++.+..  +++|+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEAL--GGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHH--TSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHc--CCCCEEEEC
Confidence            5789999999999999999999999999999998775  334455322 12444433322233333333  479999999


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      +|.
T Consensus        78 Ag~   80 (239)
T 2ekp_A           78 AAV   80 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            883

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.50  E-value=0.00065  Score=56.95  Aligned_cols=79  Identities=27%  Similarity=0.397  Sum_probs=54.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHhc--CCcccEEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKARK--LKGVDVLY  226 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~~--~~~~d~v~  226 (347)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+ ..-.+.++...+...  .+++|+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD-VRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-TTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcC-CCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            47899999999999999999999999999999988766554 34422 222222 111223444444322  34799999


Q ss_pred             eCCC
Q 019049          227 DPVG  230 (347)
Q Consensus       227 d~~g  230 (347)
                      +++|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.50  E-value=0.0005  Score=58.13  Aligned_cols=80  Identities=26%  Similarity=0.316  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++.. ..+  |..+.   +.+++..+..  ..+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP---AQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH---HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCH---HHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988766543 33321 222  22222   1223332211  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        83 D~lv~~Ag~   91 (260)
T 1nff_A           83 HVLVNNAGI   91 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.49  E-value=0.0005  Score=57.47  Aligned_cols=82  Identities=28%  Similarity=0.432  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+     .+.. ..+..+-.+. +.+++..+..  ..+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE-ESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999998876654432     2432 2222221111 2233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|+++|.
T Consensus        85 ~~d~vi~~Ag~   95 (248)
T 2pnf_A           85 GIDILVNNAGI   95 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.49  E-value=0.00051  Score=57.49  Aligned_cols=82  Identities=28%  Similarity=0.350  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++ ++++.+.+    ++.+... .+..+-.+ .+.+++..+..  ..+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999998 76655443    2234322 22222111 12233333221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 2uvd_A           82 QVDILVNNAGV   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.49  E-value=0.00053  Score=58.05  Aligned_cols=82  Identities=20%  Similarity=0.289  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcC--CcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLG--VDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g--~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|+++++|...++.+...|++|++++++.++.+.+.    +.+  ....+..+-.+ .+.++++.+..  ..+
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD-RAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999988765542    233  12222222111 12233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        88 ~id~lvnnAg~   98 (262)
T 3pk0_A           88 GIDVVCANAGV   98 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.49  E-value=0.00053  Score=57.90  Aligned_cols=82  Identities=18%  Similarity=0.220  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    +..|... .+..+-.+. +.++...+..  ..++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA-EDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999988765443    2234322 222221111 1222222211  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        92 iD~lv~~Ag~  101 (260)
T 2zat_A           92 VDILVSNAAV  101 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.49  E-value=0.00064  Score=58.15  Aligned_cols=83  Identities=20%  Similarity=0.302  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHH----HHhcCCcEEEeCCCCCchhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKF----LKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~------------~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .++++||+|+++++|.++++.+...|++|++++++            .++.+.    +++.|....+-.-+..-.+.+++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999986            333332    23345332221111111122333


Q ss_pred             HHHHh--cCCcccEEEeCCCc
Q 019049          213 FLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       213 ~~~~~--~~~~~d~v~d~~g~  231 (347)
                      +.+..  ..+++|++++++|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            33221  12479999999883

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.49  E-value=0.00063  Score=56.89  Aligned_cols=82  Identities=24%  Similarity=0.363  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcC--CcEEEeCCC--CCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLG--VDHVVDLSN--ESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g--~~~v~~~~~--~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|+|++|++|...++.+...|++|++++++.++.+.+.    +.+  ...++..+-  .+. +.+..+.+..  .
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~-~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATA-QQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCH-HHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999988765543    233  222222221  221 2223322221  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2479999999883

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.49  E-value=0.0009  Score=57.79  Aligned_cols=81  Identities=15%  Similarity=0.259  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+. ++    +.. ..+..+-.+ .+.+....+..  ..+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-HHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999987665442 22    432 222222111 12233333221  234


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++++|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999988

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.48  E-value=0.00052  Score=58.62  Aligned_cols=79  Identities=16%  Similarity=0.303  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVDH-VV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~~~-v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+... +    .|... .+  |..+.   +.++++.+..  .
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP---PAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH---HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH---HHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987654432 2    24332 22  22222   2233333221  1


Q ss_pred             CCcccEEEeCCC
Q 019049          219 LKGVDVLYDPVG  230 (347)
Q Consensus       219 ~~~~d~v~d~~g  230 (347)
                      .+++|++++++|
T Consensus       103 ~g~id~lv~nAg  114 (277)
T 4fc7_A          103 FGRIDILINCAA  114 (277)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            247999999998

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.48  E-value=0.00034  Score=58.17  Aligned_cols=76  Identities=22%  Similarity=0.313  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH----HhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK----ARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----~~~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+     +....+. .+..-.+.++...+    ..+.+++|+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~-~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVD-GNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECC-TTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEe-CCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3678999999999999999999999999999999876432     1111111 11111122223322    222257999


Q ss_pred             EEeCCC
Q 019049          225 LYDPVG  230 (347)
Q Consensus       225 v~d~~g  230 (347)
                      +++++|
T Consensus        76 lv~~Ag   81 (236)
T 1ooe_A           76 VFCVAG   81 (236)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999998

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.48  E-value=0.00087  Score=54.78  Aligned_cols=92  Identities=22%  Similarity=0.285  Sum_probs=62.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+. .+.. ++..+-.+.   ..   +..  .++|+||.++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~-~~~~D~~d~---~~---~~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDIN-ILQKDIFDL---TL---SDL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSE-EEECCGGGC---CH---HHH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCe-EEeccccCh---hh---hhh--cCCCEEEECCcC
Confidence            6999999999999999999999999999999988766553 3333 222221111   11   222  478999999985


Q ss_pred             c---------chHHHHhccccC--CEEEEEeec
Q 019049          232 K---------LTKESLKLLNWG--AQILVIGFA  253 (347)
Q Consensus       232 ~---------~~~~~~~~l~~~--G~~v~~g~~  253 (347)
                      .         ....+++.++..  ++++.++..
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            2         124456666554  688887643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.48  E-value=0.00046  Score=58.83  Aligned_cols=83  Identities=17%  Similarity=0.210  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHH-hc----CCc-EEE--eCCCC-CchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFLK-SL----GVD-HVV--DLSNE-SVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~~-~~----g~~-~v~--~~~~~-~~~~~~~~~~~~~-  217 (347)
                      .++++||+|++|++|..+++.+...|++|+++++ +.++.+.+. ++    |.. ..+  |..+. +..+.++.+.+.. 
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 777655442 22    432 222  33332 0002233333221 


Q ss_pred             -cCCcccEEEeCCCc
Q 019049          218 -KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 -~~~~~d~v~d~~g~  231 (347)
                       ..+++|++++++|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence             12479999999883

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.48  E-value=0.00077  Score=57.64  Aligned_cols=83  Identities=18%  Similarity=0.225  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCC---cEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGV---DHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~---~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+.   ...+...+..-.+.+++..+..  ..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999998866544    23332   1111111111112233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.48  E-value=0.00056  Score=58.34  Aligned_cols=80  Identities=21%  Similarity=0.280  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh-cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR-KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~-~~~  220 (347)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+.    +.+... .+  |..+.+.   .+.+.+.. ..+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGA---GTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTH---HHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHH---HHHHHHHHHHhC
Confidence            5789999999999999999999999999999999887654432    234322 22  3333322   22222211 115


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.47  E-value=0.00048  Score=58.25  Aligned_cols=82  Identities=24%  Similarity=0.228  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+ ++++.. .++..+-.+. +.+++..+..  ..+++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE-KDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHCCCCCE
Confidence            578999999999999999999999999999999988766554 344533 2222221111 2233332211  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +|+++|.
T Consensus        90 li~~Ag~   96 (265)
T 2o23_A           90 AVNCAGI   96 (265)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.47  E-value=0.00095  Score=57.04  Aligned_cols=80  Identities=28%  Similarity=0.253  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh-cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d~v~  226 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +++....+..-+..-.+.++++.+.. ..+++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            5789999999999999999999999999999999988776654 45533222112222222344444433 234789999


Q ss_pred             eC
Q 019049          227 DP  228 (347)
Q Consensus       227 d~  228 (347)
                      ++
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            88

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.47  E-value=0.001  Score=55.61  Aligned_cols=81  Identities=22%  Similarity=0.282  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .+++++|+|++|++|...++.+...|++|+++++++++.+.+. ++|. ..+..+-.+. +.+++..+..  ..+++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-HPVVMDVADP-ASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-EEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999999988766554 4553 2232221111 1122222211  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        82 vn~Ag~   87 (245)
T 1uls_A           82 VHYAGI   87 (245)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.47  E-value=0.00049  Score=58.85  Aligned_cols=82  Identities=27%  Similarity=0.340  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+-.+. +.++.+.+..  ..+++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDG-ERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCH-HHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999999999999999999999988766554 44432 2222221111 2233322211  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        83 lv~~Ag~   89 (281)
T 3m1a_A           83 LVNNAGR   89 (281)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999983

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.47  E-value=0.00066  Score=57.52  Aligned_cols=82  Identities=24%  Similarity=0.320  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCc--EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVD--HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~--~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.+     .+..  ..+..+-.+ .+.++.+.+..  ..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999887655422     3322  222222111 12233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        86 g~id~lvnnAg~   97 (265)
T 3lf2_A           86 GCASILVNNAGQ   97 (265)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.47  E-value=0.00037  Score=59.80  Aligned_cols=83  Identities=19%  Similarity=0.301  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-----------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----------IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-----------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.++           .+.+++.+....+..-+..-.++++++.+..
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999998652           2223344433222111211112233333221


Q ss_pred             --cCCcccEEEeCCCc
Q 019049          218 --KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 --~~~~~d~v~d~~g~  231 (347)
                        ..+++|++++++|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence              12479999999883

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.46  E-value=0.00065  Score=57.44  Aligned_cols=80  Identities=25%  Similarity=0.347  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC-cEEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV-DHVV--DLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~-~~v~--~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++.. ...+  |..+.   +.+++..+..  ..+++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~---~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKR---ASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCH---HHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCH---HHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999988766554 3321 1222  22222   1222222211  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        88 D~lv~~Ag~   96 (263)
T 3ak4_A           88 DLLCANAGV   96 (263)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999883

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.46  E-value=0.00072  Score=56.81  Aligned_cols=82  Identities=23%  Similarity=0.331  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c----C-CcEEEeCCC--CCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----G-VDHVVDLSN--ESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~----g-~~~v~~~~~--~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|+|+++++|.+.++.+...|++|++++++.++.+.+.+ +    + ....+..+-  .+. +.++++.+..  .
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTS-ENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCH-HHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999887655432 1    2 122222221  221 2233333221  2


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            3479999999883

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.45  E-value=0.0007  Score=57.04  Aligned_cols=81  Identities=23%  Similarity=0.278  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+.. ..+..+-.+. +.+++..+..  ..++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT-ESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999988765433    223432 2222221111 2233333211  1247


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++++++|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.45  E-value=0.00068  Score=57.75  Aligned_cols=82  Identities=22%  Similarity=0.240  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cCCcE-EEeCCCCCchhhHHHHHHH-hcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVDH-VVDLSNESVIPSVKEFLKA-RKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~~~~~-~~~~~~d  223 (347)
                      .++++||+|+++++|.++++.+...|++|+++++++...+.+++   .+... .+..+-.+. +.++.+.+. ...+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADL-EGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHhcCCCc
Confidence            57899999999999999999999999999999976543333333   33322 222221121 222222221 1125799


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.45  E-value=0.001  Score=58.01  Aligned_cols=79  Identities=22%  Similarity=0.295  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC--c-EEE--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--D-HVV--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~--~-~v~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .+++|||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+.  . .++  |..+.   +.+.++.+..  
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~   83 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR---EGFKMAADEVEA   83 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH---HHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH---HHHHHHHHHHHH
Confidence            5789999999999999999999999999999999988765543    2232  1 222  32222   2233333221  


Q ss_pred             cCCcccEEEeCCC
Q 019049          218 KLKGVDVLYDPVG  230 (347)
Q Consensus       218 ~~~~~d~v~d~~g  230 (347)
                      ..+++|++++++|
T Consensus        84 ~~g~id~lv~nAg   96 (319)
T 3ioy_A           84 RFGPVSILCNNAG   96 (319)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence            1247999999998

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.45  E-value=0.00038  Score=58.63  Aligned_cols=78  Identities=14%  Similarity=-0.029  Sum_probs=53.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+.   +.|...... +..+.....+.+.+..  +++|++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~--g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAY--GQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHH--SCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHh--CCCCEEEE
Confidence            47999999999999999999999999999999887665443   234332221 3333322233333333  47999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        79 nAg~   82 (254)
T 1zmt_A           79 NDIF   82 (254)
T ss_dssp             ECCC
T ss_pred             CCCc
Confidence            9873

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.44  E-value=0.00071  Score=57.72  Aligned_cols=83  Identities=28%  Similarity=0.305  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHH----HhcCCcEEEeCCCCCchhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~------------~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .++++||+|+++++|..+++.+...|++|++++++            .++.+..    +..+....+..-+..-.+.+++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999876            4444332    3344332221112111122333


Q ss_pred             HHHHh--cCCcccEEEeCCCc
Q 019049          213 FLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       213 ~~~~~--~~~~~d~v~d~~g~  231 (347)
                      +.+..  ..+++|++++++|.
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            33221  12479999999984

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.44  E-value=0.00072  Score=57.68  Aligned_cols=81  Identities=25%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc---CCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---GVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~---g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. ++   |....+. -+..-.+.++++.+..  ..+++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIP-ADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECC-CCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEE-eeCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999987665442 22   3111111 1111112233333221  13479


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++++++|
T Consensus       107 D~lvnnAg  114 (276)
T 2b4q_A          107 DILVNNAG  114 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.44  E-value=0.00047  Score=58.77  Aligned_cols=83  Identities=23%  Similarity=0.336  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-------HH----HHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-------IK----FLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-------~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .+++++|+|+++++|..+++.+...|++|++++++.++       .+    .++..|....+..-+..-.+.++++.+..
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999988643       22    22333433222111111112233333221


Q ss_pred             --cCCcccEEEeCCCc
Q 019049          218 --KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 --~~~~~d~v~d~~g~  231 (347)
                        ..+++|++++++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence              12479999999983

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.43  E-value=0.00081  Score=58.09  Aligned_cols=83  Identities=19%  Similarity=0.260  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHH----HHhcCCcEEEeCCCCCchhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKF----LKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~------------~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .++++||+|+++++|.++++.+...|++|++++++            .++.+.    ++..|.......-+..-.+.+++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999876            444333    23445332222112111122333


Q ss_pred             HHHHh--cCCcccEEEeCCCc
Q 019049          213 FLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       213 ~~~~~--~~~~~d~v~d~~g~  231 (347)
                      +.+..  ..+++|++++++|.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCC
Confidence            33221  12479999999883

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.43  E-value=0.00059  Score=57.44  Aligned_cols=83  Identities=24%  Similarity=0.398  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++  .+.+++.|....+...+..-.+.++...+..  ..+++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999987651  1223333433222111211112233333211  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.42  E-value=0.00068  Score=59.27  Aligned_cols=83  Identities=27%  Similarity=0.386  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC----------hhhHHH----HHhcCCcEEEeCCCCCchhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG----------AEKIKF----LKSLGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~----------~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      .++++||+|+++++|.++++.+...|++|++++++          .++.+.    ++..|....+...+..-.+.++.+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            57899999999999999999999999999999876          333332    2334543333222222222233333


Q ss_pred             HHh--cCCcccEEEeCCCc
Q 019049          215 KAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       215 ~~~--~~~~~d~v~d~~g~  231 (347)
                      +..  ..+++|++++++|.
T Consensus       106 ~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            221  12479999999984

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.42  E-value=0.00094  Score=56.24  Aligned_cols=81  Identities=25%  Similarity=0.268  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+..++++. ..+..+-.+. +.++...+..  ..+++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~-~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDE-RERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999998776333344432 3333222221 1223322211  124799999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99883

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.42  E-value=0.00088  Score=57.30  Aligned_cols=83  Identities=16%  Similarity=0.304  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHH----hc-CCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFLK----SL-GVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~~----~~-g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|+++++|..+++.+...|++|+++++ +.++.+.+.    +. +....+...+..-.+.++++.+..  ..+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4689999999999999999999999999999998 444444332    22 322222222222222233333321  234


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.42  E-value=0.00097  Score=57.14  Aligned_cols=82  Identities=21%  Similarity=0.279  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .+++++|+|++|++|..+++.+...|++|+++.++.++.+.+.    +.+... .+..+-.+ .+.++++.+..  ..++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            4679999999999999999999889999999888877655432    234332 22222111 12233333221  2347


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|+++|.
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.41  E-value=0.00089  Score=57.22  Aligned_cols=83  Identities=22%  Similarity=0.273  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-------------ChhhHHHH----HhcCCcEEEeCCCCCchhhHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-------------GAEKIKFL----KSLGVDHVVDLSNESVIPSVK  211 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-------------~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~  211 (347)
                      .++++||+|+++++|..+++.+...|++|+++++             +.++.+.+    ++.|.......-+..-.+.++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            6789999999999999999999999999999987             45554443    234433222111211112233


Q ss_pred             HHHHHh--cCCcccEEEeCCCc
Q 019049          212 EFLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       212 ~~~~~~--~~~~~d~v~d~~g~  231 (347)
                      ++.+..  ..+++|++++++|.
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            333221  12479999999884

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.41  E-value=0.00071  Score=58.11  Aligned_cols=80  Identities=26%  Similarity=0.441  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHh-c-----CCcE-EE--eCCCCCchhhHHHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLKS-L-----GVDH-VV--DLSNESVIPSVKEFLKA  216 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~---~V~~~~~~~~~~~~~~~-~-----g~~~-v~--~~~~~~~~~~~~~~~~~  216 (347)
                      .++++||+|+++++|..+++.+...|+   +|++++++.++.+.+.+ +     +... .+  |..+.+   .++++.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~---~v~~~~~~  108 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAE---KIKPFIEN  108 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGG---GHHHHHHT
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH---HHHHHHHH
Confidence            578999999999999999988877777   99999999887665532 1     3222 22  333322   25555544


Q ss_pred             hc--CCcccEEEeCCCc
Q 019049          217 RK--LKGVDVLYDPVGG  231 (347)
Q Consensus       217 ~~--~~~~d~v~d~~g~  231 (347)
                      ..  .+++|++++++|.
T Consensus       109 ~~~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGK  125 (287)
T ss_dssp             SCGGGCSCCEEEECCCC
T ss_pred             HHHhcCCCCEEEECCCc
Confidence            32  2479999999883

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.41  E-value=0.0011  Score=56.14  Aligned_cols=95  Identities=12%  Similarity=0.064  Sum_probs=70.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .++.+||.+|+ |. |..+..+++.. |.+|++++.+++..+.+++.+.. .+...+....   .      ...+.||+|
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~---~------~~~~~fD~v  152 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL---P------FSDTSMDAI  152 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC---S------BCTTCEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhC---C------CCCCceeEE
Confidence            57889999998 66 88888999886 78999999999988888876533 2222222111   0      123579999


Q ss_pred             EeCCCccchHHHHhccccCCEEEEEeec
Q 019049          226 YDPVGGKLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       226 ~d~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +.......+..+.+.|+++|+++.....
T Consensus       153 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          153 IRIYAPCKAEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             EEESCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEeCChhhHHHHHHhcCCCcEEEEEEcC
Confidence            9765557789999999999999987543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.41  E-value=0.0007  Score=57.88  Aligned_cols=82  Identities=18%  Similarity=0.347  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h---cCC---c-EEEeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGV---D-HVVDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~---~g~---~-~v~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +   .+.   . ..+..+-.+ .+.++++.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999987765542 2   232   2 222222111 12233332211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        84 ~g~iD~lv~nAg~   96 (280)
T 1xkq_A           84 FGKIDVLVNNAGA   96 (280)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999873

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.40  E-value=0.0007  Score=57.12  Aligned_cols=82  Identities=17%  Similarity=0.271  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|+++++ +.++.+.+    +..+... ++..+-.+. +.+.+..+..  ..+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE-SDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4689999999999999999999889999999999 76655433    2234322 222221111 2222222211  123


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|+++|.
T Consensus        85 ~id~li~~Ag~   95 (261)
T 1gee_A           85 KLDVMINNAGL   95 (261)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            78999999873

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.39  E-value=0.00073  Score=56.00  Aligned_cols=81  Identities=17%  Similarity=0.189  Sum_probs=54.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      +++++|+|++|++|...++.+...|++|++++++.++.+.+. +++....+..+-.+. +.+++..+..  ..+++|+++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREE-GDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999999999999999999988766554 343223332222221 1222222211  114789999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99883

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.39  E-value=0.00091  Score=56.82  Aligned_cols=83  Identities=22%  Similarity=0.235  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|+++++|..+++.+...|++|+++++ +.++.+.+    ++.|....+..-+..-.+.++.+.+..  ..++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999888 44444433    333433222111111112233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.39  E-value=0.00072  Score=56.76  Aligned_cols=82  Identities=22%  Similarity=0.354  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    +..+... .+..+-.+ .+.++...+..  ..++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhcCC
Confidence            468999999999999999999988999999999988765443    2234322 22222111 11233332211  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.39  E-value=0.00073  Score=56.99  Aligned_cols=79  Identities=22%  Similarity=0.267  Sum_probs=51.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      +++++|+|++|++|..+++.+...|++|++++++.++  .+.+.    +.+... .+  |..+.   +.++...+..  .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK---ANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCH---HHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHH
Confidence            5789999999999999999998899999999988766  43332    224322 22  22222   2223322211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus        79 ~g~iD~lv~nAg~   91 (258)
T 3a28_C           79 LGGFDVLVNNAGI   91 (258)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            2479999999884

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.38  E-value=0.00089  Score=57.46  Aligned_cols=83  Identities=22%  Similarity=0.231  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHH-----hcCCc-EEE--eCCCCC-chhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLK-----SLGVD-HVV--DLSNES-VIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~-----~~g~~-~v~--~~~~~~-~~~~~~~~~~~~-  217 (347)
                      .++++||+|++|++|.++++.+...|++|++++++. ++.+.+.     +.|.. ..+  |..+.+ ..+.++.+.+.. 
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999987 5544332     23422 222  333310 022233333321 


Q ss_pred             -cCCcccEEEeCCCc
Q 019049          218 -KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 -~~~~~d~v~d~~g~  231 (347)
                       ..+++|++|+++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence             12479999999883

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.38  E-value=0.00038  Score=58.23  Aligned_cols=77  Identities=19%  Similarity=0.078  Sum_probs=53.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-e--cChhhHHHHH-hc-CCcEEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-A--RGAEKIKFLK-SL-GVDHVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~--~~~~~~~~~~-~~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      +++++|+|++|++|..+++.+...|++|+++ .  +++++.+.+. ++ +.+ +.  +..+.....+.+.+.  .+++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~--~g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-AL--AEQKPERLVDATLQH--GEAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-EC--CCCCGGGHHHHHGGG--SSCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-cc--CHHHHHHHHHHHHHH--cCCCCE
Confidence            4689999999999999999999999999999 6  8887766553 34 322 22  333332223333322  347999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        76 lv~~Ag~   82 (244)
T 1zmo_A           76 IVSNDYI   82 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.38  E-value=0.001  Score=57.48  Aligned_cols=81  Identities=22%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h--------cCCc-EEEeCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S--------LGVD-HVVDLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~--------~g~~-~v~~~~~~~~~~~~~~~~~~~-  217 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. +        .+.. ..+..+-.+ .+.++.+.+.. 
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHHHH
Confidence            4689999999999999999999999999999999987665442 1        1322 122222111 12233332221 


Q ss_pred             -cCCcccEEEeCCC
Q 019049          218 -KLKGVDVLYDPVG  230 (347)
Q Consensus       218 -~~~~~d~v~d~~g  230 (347)
                       ..+++|++|+++|
T Consensus        96 ~~~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence             1147999999988

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.38  E-value=0.00078  Score=58.17  Aligned_cols=82  Identities=22%  Similarity=0.404  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC---c-EEEeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV---D-HVVDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~---~-~v~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.|.   . ..+..+-.+ .+.++.+.+..  .
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999987765442    2232   2 222222111 12233332211  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+++|++++++|.
T Consensus       104 ~g~iD~lvnnAG~  116 (297)
T 1xhl_A          104 FGKIDILVNNAGA  116 (297)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999883

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.38  E-value=0.00034  Score=59.89  Aligned_cols=82  Identities=21%  Similarity=0.308  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .|+++||+|+++++|.++++.+...|++|++++++.++.+.+. ++    +.. ..+..+-.+. +.++++.+..  ..+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDP-DQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999988765543 22    222 2232222221 2233332221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       111 ~iD~lvnnAG~  121 (281)
T 4dry_A          111 RLDLLVNNAGS  121 (281)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.38  E-value=0.00093  Score=58.26  Aligned_cols=83  Identities=23%  Similarity=0.304  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHH----HhcCCcEEEeCCCCCchhhHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~------------~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .++++||+|+++++|..+++.+...|++|++++++            .++.+..    ++.|....+..-+..-.+.++.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            57899999999999999999999999999999875            3433322    3345332221112111122333


Q ss_pred             HHHHh--cCCcccEEEeCCCc
Q 019049          213 FLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       213 ~~~~~--~~~~~d~v~d~~g~  231 (347)
                      +.+..  ..+++|++++++|.
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            33221  12479999999883

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.37  E-value=0.001  Score=56.98  Aligned_cols=35  Identities=40%  Similarity=0.382  Sum_probs=32.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .++++||+|+++++|.++++.+...|++|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            57899999999999999999999999999999876

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.37  E-value=0.00068  Score=56.76  Aligned_cols=81  Identities=22%  Similarity=0.231  Sum_probs=52.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +++++|+|++|++|..++..+...|++|++++++.++.+.+. ++    +.. .++..+-.+. +.+++..+..  ..++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE-GDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999987765543 22    322 2222221111 1233332211  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        81 id~li~~Ag~   90 (250)
T 2cfc_A           81 IDVLVNNAGI   90 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.37  E-value=0.00085  Score=57.79  Aligned_cols=82  Identities=22%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc---C--CcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---G--VDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~---g--~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++   +  ....+..+-.+. +.++++.+..  ..+
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP-GSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCH-HHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999988765543 22   2  112222221111 2233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       119 ~iD~lvnnAg~  129 (293)
T 3rih_A          119 ALDVVCANAGI  129 (293)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.37  E-value=0.00098  Score=56.64  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|++++++ .+..+.+    ++.+.. .++..+-.+. +.+.+..+..  ..+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE-SDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999984 3333332    334433 2232222221 2223332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.36  E-value=0.0086  Score=50.93  Aligned_cols=96  Identities=16%  Similarity=0.198  Sum_probs=62.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +|||+|++|.+|..+++.+...  |++|+++++++++.+.+...+...+ ..+-.+    .+.+.+..  .++|+||.++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d----~~~~~~~~--~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVR-QADYGD----EAALTSAL--QGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEE-ECCTTC----HHHHHHHT--TTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEE-EcCCCC----HHHHHHHH--hCCCEEEEeC
Confidence            4899999999999999988887  8999999998876655555554332 222111    23333333  3689999998


Q ss_pred             Ccc------chHHHHhccccC--CEEEEEeecC
Q 019049          230 GGK------LTKESLKLLNWG--AQILVIGFAS  254 (347)
Q Consensus       230 g~~------~~~~~~~~l~~~--G~~v~~g~~~  254 (347)
                      +..      ....+++.++..  ++++.++...
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            742      223445544432  5888887644

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.36  E-value=0.00056  Score=58.39  Aligned_cols=80  Identities=24%  Similarity=0.454  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc---C---Cc-EEE--eCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---G---VD-HVV--DLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~---g---~~-~v~--~~~~~~~~~~~~~~~~~~-  217 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++   +   .. ..+  |..+.   +.++...+.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~   81 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD---AGQDEILSTTL   81 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH---HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCH---HHHHHHHHHHH
Confidence            4689999999999999999999999999999999988765543 22   2   11 122  22222   1223322211 


Q ss_pred             -cCCcccEEEeCCCc
Q 019049          218 -KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 -~~~~~d~v~d~~g~  231 (347)
                       ..+++|++++++|.
T Consensus        82 ~~~g~id~lv~~Ag~   96 (278)
T 1spx_A           82 GKFGKLDILVNNAGA   96 (278)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHcCCCCEEEECCCC
Confidence             12479999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.35  E-value=0.0015  Score=55.62  Aligned_cols=83  Identities=22%  Similarity=0.279  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-------------ChhhHHHH----HhcCCcEEEeCCCCCchhhHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-------------GAEKIKFL----KSLGVDHVVDLSNESVIPSVK  211 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-------------~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~  211 (347)
                      .++++||+|+++++|.++++.+...|++|+++++             +.++.+..    ...+....+..-+..-.+.++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999999999999999999999999999987             44444333    233433222111211112233


Q ss_pred             HHHHHh--cCCcccEEEeCCCc
Q 019049          212 EFLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       212 ~~~~~~--~~~~~d~v~d~~g~  231 (347)
                      +..+..  ..+++|++++++|.
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            333221  12479999999884

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.35  E-value=0.00084  Score=56.55  Aligned_cols=81  Identities=19%  Similarity=0.256  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d~v~d  227 (347)
                      .++++||+|+++++|..+++.+...|++|++++++.+  +..++++....+-.-+..-.+.++.+.+.. ..+++|++++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999999999999998654  334455533222111111112233332211 1357999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        86 nAg~   89 (257)
T 3tl3_A           86 CAGT   89 (257)
T ss_dssp             CGGG
T ss_pred             CCCC
Confidence            9983

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.35  E-value=0.00027  Score=58.80  Aligned_cols=98  Identities=14%  Similarity=0.140  Sum_probs=63.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .++|||+|++|++|..+++.+...| ++|+++++++++.+.+...++. ++..+-.+    .+.+.+..  .++|++|++
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~d----~~~~~~~~--~~~D~vv~~   95 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQ-IIMGDVLN----HAALKQAM--QGQDIVYAN   95 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEE-EEECCTTC----HHHHHHHH--TTCSEEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcE-EEEecCCC----HHHHHHHh--cCCCEEEEc
Confidence            3689999999999999999999999 8999999988764432222222 22222111    22333333  368999999


Q ss_pred             CCccc----hHHHHhccccC--CEEEEEeecC
Q 019049          229 VGGKL----TKESLKLLNWG--AQILVIGFAS  254 (347)
Q Consensus       229 ~g~~~----~~~~~~~l~~~--G~~v~~g~~~  254 (347)
                      +|...    .+.++..++..  ++++.++...
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            88643    23455555443  6898886543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.34  E-value=0.00048  Score=58.48  Aligned_cols=79  Identities=18%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE--eCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+..... ..+  |..+.   +.++...+..  ..+++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~---~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNT-LCAQVDVTDK---YTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTE-EEEECCTTCH---HHHHHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCc-eEEEecCCCH---HHHHHHHHHHHHHCCCCCE
Confidence            46899999999999999999999999999999998876554322221 122  22222   1233332221  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        91 lvnnAg~   97 (266)
T 3p19_A           91 IVNNAGM   97 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.34  E-value=0.00072  Score=56.82  Aligned_cols=82  Identities=23%  Similarity=0.394  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++ .++.+.+    +..+.. ..+..+-.+ .+.+++..+..  ..+
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999998 6555433    222422 122222111 12233322211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|+++|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.34  E-value=0.00067  Score=55.59  Aligned_cols=95  Identities=17%  Similarity=0.233  Sum_probs=61.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+..  .+. .++..+-.+.   .+.+.+..  .++|+||+++|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-~~~~~D~~d~---~~~~~~~~--~~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNV-KAVHFDVDWT---PEEMAKQL--HGMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTE-EEEECCTTSC---HHHHHTTT--TTCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCc-eEEEecccCC---HHHHHHHH--cCCCEEEECCcC
Confidence            699999999999999999999999999999988754322  122 2232222221   12233333  379999999985


Q ss_pred             cc----------hHHHHhccccC--CEEEEEeecC
Q 019049          232 KL----------TKESLKLLNWG--AQILVIGFAS  254 (347)
Q Consensus       232 ~~----------~~~~~~~l~~~--G~~v~~g~~~  254 (347)
                      ..          ...+++.++..  ++++.++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            21          23344444443  5888887644

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.32  E-value=0.00096  Score=57.40  Aligned_cols=42  Identities=26%  Similarity=0.200  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL  190 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~  190 (347)
                      .++++||+|+++++|.++++.+...|++|++++ ++.++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence            578999999999999999999999999999999 888765544

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.32  E-value=0.00061  Score=57.69  Aligned_cols=83  Identities=24%  Similarity=0.340  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC---CEEEEEecChhhHHHHHhc---CCc-EEE--eCCCCCc-hhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG---ATIIAVARGAEKIKFLKSL---GVD-HVV--DLSNESV-IPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g---~~V~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~-~~~~~~~~~~~~  218 (347)
                      .++++||+|++|++|..+++.+...|   ++|++++++.++.+.++++   +.. .++  |..+.+. ....+.+.+..+
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   99 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   99 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence            56799999999999999999999899   9999999987654433332   322 222  3333222 111222222222


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      ..++|++|+++|.
T Consensus       100 ~~~id~li~~Ag~  112 (267)
T 1sny_A          100 DQGLNVLFNNAGI  112 (267)
T ss_dssp             GGCCSEEEECCCC
T ss_pred             CCCccEEEECCCc
Confidence            2269999999873

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.0011  Score=56.67  Aligned_cols=81  Identities=22%  Similarity=0.299  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcE-EE--eCCCCCc-hhhHHHHHHHhcC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VV--DLSNESV-IPSVKEFLKARKL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-v~--~~~~~~~-~~~~~~~~~~~~~  219 (347)
                      .++++||+|+++++|..+++.+...|++|+++++ +.++.+.+    +..|... .+  |..+.+. ....+++.+..  
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF--  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH--
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc--
Confidence            5789999999999999999999999999999985 55544433    2334332 22  3333222 11222333322  


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.32  E-value=0.0013  Score=55.18  Aligned_cols=106  Identities=24%  Similarity=0.259  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHH------
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKA------  216 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~------  216 (347)
                      .+++++|+|+++++|...++.+...|++|+++ .++.++.+..    ++.+... .+..+-.+. +..+...+.      
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESL-HGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCH-HHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999886 4444444332    2334322 222221121 112222221      


Q ss_pred             --hcCCcccEEEeCCCcc---c-----------------------hHHHHhccccCCEEEEEeecCC
Q 019049          217 --RKLKGVDVLYDPVGGK---L-----------------------TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       217 --~~~~~~d~v~d~~g~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                        .....+|++++++|..   .                       .+.++..+++.|+++.++....
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence              1224599999998841   0                       1122335566789999876543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.0011  Score=58.10  Aligned_cols=81  Identities=25%  Similarity=0.361  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-----hhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-----AEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-----~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~-  217 (347)
                      .++++||+|++|++|..+++.+...|++|++++++     .++.+.+    +..+.. ..+..+-.+ .+++++..+.. 
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~   82 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQII   82 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHH
Confidence            36799999999999999999999999999998775     2333333    223432 222222111 12233333221 


Q ss_pred             -cCCcccEEEeCCC
Q 019049          218 -KLKGVDVLYDPVG  230 (347)
Q Consensus       218 -~~~~~d~v~d~~g  230 (347)
                       ..+++|++++++|
T Consensus        83 ~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence             1247999999998

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.28  E-value=0.0012  Score=56.06  Aligned_cols=85  Identities=20%  Similarity=0.246  Sum_probs=53.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      +.+++++||+|++|++|..+++.+...|++|+++ .++.++.+.+    ++.+....+..-+..-.+.++.+.+..  ..
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999999999877 6666655443    233432222111211112233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus       103 g~id~li~nAg~  114 (272)
T 4e3z_A          103 GRLDGLVNNAGI  114 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.28  E-value=0.0014  Score=55.37  Aligned_cols=82  Identities=20%  Similarity=0.220  Sum_probs=53.6

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh---hhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~---~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++  |++|..+++.+...|++|++++++.   +..+.+. +.+....+..+-.+. +.+++..+..  ..+
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAED-ASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            57899999998  8999999999999999999999876   2233332 234323332222221 2234443322  234


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        87 ~iD~lv~~Ag~   97 (265)
T 1qsg_A           87 KFDGFVHSIGF   97 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.28  E-value=0.0045  Score=50.06  Aligned_cols=97  Identities=20%  Similarity=0.311  Sum_probs=68.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++++||-.|+ |. |..++.+++. +.+|++++.+++..+.+++    .|..   .++..+..+.   .     
T Consensus        49 ~~l~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---~-----  117 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-GS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA---L-----  117 (204)
T ss_dssp             HHHCCCTTCEEEEETC-TT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG---G-----
T ss_pred             HhcCCCCCCEEEEecC-CC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh---c-----
Confidence            5667889999999998 43 8888888888 8899999999998777654    4543   2222222211   0     


Q ss_pred             HhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                       .....||+|+...+.  +.+..+.+.|+++|+++...
T Consensus       118 -~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          118 -ADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             -TTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -ccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEe
Confidence             112469999966543  25678889999999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.28  E-value=0.0016  Score=54.52  Aligned_cols=82  Identities=18%  Similarity=0.231  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. ++.   ...++..+-.+. +.+.++.+..  ..+.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDE-DGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999887665543 332   122222221111 1223322221  12468


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.26  E-value=0.0013  Score=55.68  Aligned_cols=82  Identities=26%  Similarity=0.356  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcC--CcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          149 SGQVLLVLGAAG-GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLG--VDHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       149 ~~~~VlI~g~~g-~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g--~~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++||+|++| ++|..+++.+...|++|++++++.++.+.+.    +.+  ...++..+-.+ .+.++++.+..  ..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS-TEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC-HHHHHHHHHHHHHHh
Confidence            578999999986 8999999999999999999999988765543    222  11222222111 12233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++++++|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            479999999983

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.26  E-value=9.9e-05  Score=62.28  Aligned_cols=92  Identities=20%  Similarity=0.244  Sum_probs=59.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch--hhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI--PSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.      .     -..++.  +.++++.+.. .+++|+++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-----~~~Dl~~~~~v~~~~~~~-~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-----LSTAEGRKQAIADVLAKC-SKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-----TTSHHHHHHHHHHHHTTC-TTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-----cccCCCCHHHHHHHHHHh-CCCCCEEEEC
Confidence            479999999999999999999999999999987654221      0     011111  1122222211 2478999999


Q ss_pred             CCccc-------------------hHHHHhcccc--CCEEEEEeecC
Q 019049          229 VGGKL-------------------TKESLKLLNW--GAQILVIGFAS  254 (347)
Q Consensus       229 ~g~~~-------------------~~~~~~~l~~--~G~~v~~g~~~  254 (347)
                      +|...                   .+.++..++.  .|+++.++...
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            88532                   1233444433  38999987654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.26  E-value=0.0012  Score=55.98  Aligned_cols=82  Identities=20%  Similarity=0.289  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|+++++ +.++.+.+    ++.+... .+..+-.+. +.+++..+..  ..+
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998 66654433    2335332 222221111 1222322211  123


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        99 ~~d~vi~~Ag~  109 (274)
T 1ja9_A           99 GLDFVMSNSGM  109 (274)
T ss_dssp             CEEEEECCCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.26  E-value=0.0013  Score=56.38  Aligned_cols=81  Identities=23%  Similarity=0.388  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc--EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD--HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+.    +.|..  .++..+-.+ .+.++.+.+..  ..+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999988765543    23432  222222111 11233332221  124


Q ss_pred             cccEEEeC-CC
Q 019049          221 GVDVLYDP-VG  230 (347)
Q Consensus       221 ~~d~v~d~-~g  230 (347)
                      ++|+++++ .|
T Consensus       106 ~iD~li~naag  116 (286)
T 1xu9_A          106 GLDMLILNHIT  116 (286)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999988 45

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.25  E-value=0.00071  Score=51.19  Aligned_cols=76  Identities=18%  Similarity=0.262  Sum_probs=54.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++|+|.|+ |.+|...++.+...|++|+++++++++.+.+++.+... +..+..+    .+.+ ......++|+++.|+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~d~~~----~~~l-~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHA-VIANATE----ENEL-LSLGIRNFEYVIVAI   78 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEE-EECCTTC----HHHH-HTTTGGGCSEEEECC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEE-EEeCCCC----HHHH-HhcCCCCCCEEEECC
Confidence            567999999 99999999999999999999999888777666666533 3222222    1222 222235789999999


Q ss_pred             Ccc
Q 019049          230 GGK  232 (347)
Q Consensus       230 g~~  232 (347)
                      +.+
T Consensus        79 ~~~   81 (144)
T 2hmt_A           79 GAN   81 (144)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            964

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.25  E-value=0.0013  Score=57.72  Aligned_cols=42  Identities=26%  Similarity=0.200  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL  190 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~  190 (347)
                      .++++||+|+++++|.++++.+...|++|++++ ++.++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            578999999999999999999999999999999 888766544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.24  E-value=0.0017  Score=54.28  Aligned_cols=83  Identities=25%  Similarity=0.264  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|...++.+...|++|+++++ +.++.+.+    ++.|.......-+..-.+.+++..+..  ..++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999998876 44444333    334433222111111112233333221  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.24  E-value=0.0012  Score=54.92  Aligned_cols=81  Identities=17%  Similarity=0.258  Sum_probs=53.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-------EEEEEecChhhHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGA-------TIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~-------~V~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ++++||+|++|++|..+++.+...|+       +|++++++.++.+.+.+    .+.. ..+..+-.+ .+.++...+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC-HHHHHHHHHHH
Confidence            56899999999999999998888899       99999999877655432    2422 122222111 12233332221


Q ss_pred             --cCCcccEEEeCCCc
Q 019049          218 --KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 --~~~~~d~v~d~~g~  231 (347)
                        ..+++|++++++|.
T Consensus        81 ~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHTSCCSEEEECCCC
T ss_pred             HHhCCCCCEEEEcCCc
Confidence              12479999999883

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.23  E-value=0.0011  Score=55.88  Aligned_cols=81  Identities=15%  Similarity=0.135  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++. +.+++.+.. .+..+-.+ .+.++.+.+..  ..+++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAV-ALYGDFSC-ETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCE-EEECCTTS-HHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCe-EEECCCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence            467999999999999999999999999999999987653 344455643 22222212 12233333221  23479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus       104 v~nAg~  109 (260)
T 3gem_A          104 VHNASE  109 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.23  E-value=0.0011  Score=55.63  Aligned_cols=81  Identities=19%  Similarity=0.275  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecCh--hhHHHHHhc--CCc-EEE--eCCCC-C-chhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA--EKIKFLKSL--GVD-HVV--DLSNE-S-VIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~--~~~~~~~~~--g~~-~v~--~~~~~-~-~~~~~~~~~~~~~  218 (347)
                      .+++++|+|++|++|..+++.+...|++ |++++++.  +..+.+.+.  +.. .++  |..+. + .....+.+.+.. 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence            4689999999999999999999999996 99888875  333444332  221 122  33322 1 111122222222 


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                       +++|++++++|.
T Consensus        83 -g~id~lv~~Ag~   94 (254)
T 1sby_A           83 -KTVDILINGAGI   94 (254)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             479999999983

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.23  E-value=0.0019  Score=55.08  Aligned_cols=82  Identities=15%  Similarity=0.217  Sum_probs=54.4

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA--EKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+||+  +++|..+++.+...|++|++++++.  ++.+.+.+ .+....+..+-.+. +.++++.+..  ..+.
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISD-QEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCH-HHHHHHHHHHHHHCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCH-HHHHHHHHHHHHHcCC
Confidence            57899999998  5699999999999999999999887  55555543 34333333222221 2233333322  1357


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999884

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.23  E-value=0.0028  Score=53.92  Aligned_cols=101  Identities=20%  Similarity=0.237  Sum_probs=69.9

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhc-----C--CcEEEeCCCCCchhhHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL-----G--VDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~-----g--~~~v~~~~~~~~~~~~~~  212 (347)
                      .....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.     |  ...+ .....+..+.   
T Consensus        92 ~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~d~~~~---  165 (280)
T 1i9g_A           92 VHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVSDLADS---  165 (280)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECSCGGGC---
T ss_pred             HHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEECchHhc---
Confidence            35677899999999998 5 788888888875  56999999999887777542     4  2211 1111122100   


Q ss_pred             HHHHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          213 FLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                         ......||+|+.....  ..+..+.+.|+++|+++...
T Consensus       166 ---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          166 ---ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             ---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence               0123579999876554  46788999999999998864

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.22  E-value=0.0012  Score=55.11  Aligned_cols=82  Identities=21%  Similarity=0.308  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++|++|..+++.+...|++|+++ .+++++.+.+    ++.+... .+..+-.+ .+.++...+..  ..+
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999998 5555444332    2334332 22222111 12233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++|+++|.
T Consensus        83 ~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 RIDILVNNAGI   93 (247)
T ss_dssp             CCCEEEECC--
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.22  E-value=0.0013  Score=59.12  Aligned_cols=87  Identities=20%  Similarity=0.231  Sum_probs=55.9

Q ss_pred             hcCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEecChhhH----------------HHHHhcCCcEE-EeCCCC
Q 019049          144 RAQL-SSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKI----------------KFLKSLGVDHV-VDLSNE  204 (347)
Q Consensus       144 ~~~~-~~~~~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~~~----------------~~~~~~g~~~v-~~~~~~  204 (347)
                      ...+ +.++++||+|+++++|++++..+.. .|++|+++.++.++.                +.+++.|.... +..+-.
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            3455 4688999999999999999888888 999999998765421                34455664322 222211


Q ss_pred             CchhhHHHHHHHh--cC-CcccEEEeCCCc
Q 019049          205 SVIPSVKEFLKAR--KL-KGVDVLYDPVGG  231 (347)
Q Consensus       205 ~~~~~~~~~~~~~--~~-~~~d~v~d~~g~  231 (347)
                      + .+..+++.+..  .. +++|++++++|.
T Consensus       134 d-~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 S-DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             S-HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             C-HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            1 12233333321  12 579999999875

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.21  E-value=0.0032  Score=52.99  Aligned_cols=102  Identities=15%  Similarity=0.193  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc----EEEeCCCCCchhhHHHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD----HVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +.....+.++.+||-+|+ | .|..+..+++..+++|++++.+++..+.+++....    .+...+-.+.         .
T Consensus        47 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~---------~  115 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGS-G-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK---------E  115 (266)
T ss_dssp             HTTTCCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC---------C
T ss_pred             HHHhcCCCCCCEEEEECC-C-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC---------C
Confidence            335567788999999998 4 78888888887799999999999988888775422    2222221111         0


Q ss_pred             hcCCcccEEEeCCCc---------cchHHHHhccccCCEEEEEeec
Q 019049          217 RKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      .....||+|+....-         ..+..+.+.|+|+|++++....
T Consensus       116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  161 (266)
T 3ujc_A          116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC  161 (266)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence            124579999875432         2357788999999999987643

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.21  E-value=0.0021  Score=51.99  Aligned_cols=142  Identities=13%  Similarity=0.175  Sum_probs=84.9

Q ss_pred             CCCCCEEEEecCCCcceeeEe-eeCCCeeeCCCCCCHHHHccCcchHHH-HHHHHHHhcCCCCCCEEEEecCCchHHHHH
Q 019049           89 FKVGDTVCGFAALGSFAQFIV-ADQSELFPVPKGCDLLAAAALPVAFGT-SHVALVHRAQLSSGQVLLVLGAAGGVGVAA  166 (347)
Q Consensus        89 ~~~Gd~V~~~~~~g~~~~~~~-~~~~~~~~~p~~~~~~~aa~l~~~~~~-a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~  166 (347)
                      ++.|+.+...   ..|.+|.. .+....+.+++++++..+..   .... ....+  ...+.++++||-.|+ |. |..+
T Consensus         6 ~~~~~~~~~~---p~w~~~~~~~~~~~~~~~~~~~~f~~~~~---~~~~~~~~~l--~~~~~~~~~vLDiG~-G~-G~~~   75 (205)
T 3grz_A            6 INLSRHLAIV---PEWEDYQPVFKDQEIIRLDPGLAFGTGNH---QTTQLAMLGI--ERAMVKPLTVADVGT-GS-GILA   75 (205)
T ss_dssp             EEEETTEEEE---ETTCCCCCSSTTCEEEEESCC-----CCH---HHHHHHHHHH--HHHCSSCCEEEEETC-TT-SHHH
T ss_pred             EEECCcEEEe---ccccccccCCCCceeEEecCCcccCCCCC---ccHHHHHHHH--HHhccCCCEEEEECC-CC-CHHH
Confidence            4455555443   35777776 66677888888877665421   1111 11111  122568899999998 43 6777


Q ss_pred             HHHHHHcCC-EEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc----chH
Q 019049          167 VQIGKVCGA-TIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK----LTK  235 (347)
Q Consensus       167 ~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~  235 (347)
                      ..+++ .+. +|++++.++...+.+++    .+..  .++..+-.+.           ....||+|+......    .+.
T Consensus        76 ~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----------~~~~fD~i~~~~~~~~~~~~l~  143 (205)
T 3grz_A           76 IAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-----------VDGKFDLIVANILAEILLDLIP  143 (205)
T ss_dssp             HHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-----------CCSCEEEEEEESCHHHHHHHGG
T ss_pred             HHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-----------CCCCceEEEECCcHHHHHHHHH
Confidence            77666 455 99999999987777754    3432  2332222211           135799998765533    356


Q ss_pred             HHHhccccCCEEEEEee
Q 019049          236 ESLKLLNWGAQILVIGF  252 (347)
Q Consensus       236 ~~~~~l~~~G~~v~~g~  252 (347)
                      .+.++|+++|+++....
T Consensus       144 ~~~~~L~~gG~l~~~~~  160 (205)
T 3grz_A          144 QLDSHLNEDGQVIFSGI  160 (205)
T ss_dssp             GSGGGEEEEEEEEEEEE
T ss_pred             HHHHhcCCCCEEEEEec
Confidence            67789999999988543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.21  E-value=0.0014  Score=54.54  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=51.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      |++++|+|++|++|..+++.+...|++|+++ .++.++.+.+.    ..+... .+..+-.+ .+.+++..+..  ..++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999985 77776554432    234322 12111111 12233333221  1347


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|+++|.
T Consensus        80 id~li~~Ag~   89 (244)
T 1edo_A           80 IDVVVNNAGI   89 (244)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.21  E-value=0.0033  Score=54.70  Aligned_cols=102  Identities=13%  Similarity=0.154  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +....++.++++||-+|+ |. |..+..+++..|++|++++.+++..+.+++.    |...-+.....++.+        
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--------  151 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-GW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED--------  151 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-TT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG--------
T ss_pred             HHHhcCCCCcCEEEEEcc-cc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH--------
Confidence            345667889999999998 44 8888888888899999999999988777643    322111111112210        


Q ss_pred             hcCCcccEEEeC-----CCc----cchHHHHhccccCCEEEEEeec
Q 019049          217 RKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       217 ~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      . ...||+|+..     .+.    ..+..+.+.|+|+|++++....
T Consensus       152 ~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          152 F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             C-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            1 2579999865     332    2457788999999999986544

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.20  E-value=0.0011  Score=55.98  Aligned_cols=74  Identities=27%  Similarity=0.411  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE--EeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV--VDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++.++.++     .......  .|..+.   ++++.+.+..  ..+++|+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----GLPEELFVEADLTTK---EGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----TSCTTTEEECCTTSH---HHHHHHHHHHHHHTSSCSE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----CCCcEEEEEcCCCCH---HHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999987542     1111111  233322   2233333321  2357999


Q ss_pred             EEeCCC
Q 019049          225 LYDPVG  230 (347)
Q Consensus       225 v~d~~g  230 (347)
                      +++++|
T Consensus        82 lVnnAG   87 (261)
T 4h15_A           82 IVHMLG   87 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.20  E-value=0.0065  Score=53.45  Aligned_cols=77  Identities=17%  Similarity=0.165  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHHhc------CCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLKSL------GVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~----~~~~~~~~------g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+.+|||+||+|.+|..+++.+...|++|++++++..    ....+...      ....++..+-.+    .+.+.+.. 
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~~~-   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD----LTTCEQVM-   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC----HHHHHHHT-
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC----HHHHHHHh-
Confidence            4679999999999999999999999999999998543    33333332      222223222222    23334443 


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                       .++|+||.+++.
T Consensus        99 -~~~d~Vih~A~~  110 (351)
T 3ruf_A           99 -KGVDHVLHQAAL  110 (351)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -cCCCEEEECCcc
Confidence             279999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.20  E-value=0.002  Score=54.78  Aligned_cols=82  Identities=18%  Similarity=0.344  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC---cEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV---DHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.   ..++..+-.+. +.++...+..  ..+++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999988765444 33332   12222221111 1223332211  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        94 d~li~~Ag~  102 (278)
T 2bgk_A           94 DIMFGNVGV  102 (278)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.19  E-value=0.0013  Score=53.04  Aligned_cols=96  Identities=15%  Similarity=0.194  Sum_probs=61.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|+|.|++|.+|..+++.+...|++|+++++++++.......+. .++..+-.+    .+.+.+..  .++|++|.++|
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~----~~~~~~~~--~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQ----AADVDKTV--AGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTS----HHHHHHHH--TTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EEEEecCCC----HHHHHHHH--cCCCEEEECcc
Confidence            689999999999999999999899999999998775432211122 222222112    22333333  35899999988


Q ss_pred             ccc-----------hHHHHhcccc--CCEEEEEeec
Q 019049          231 GKL-----------TKESLKLLNW--GAQILVIGFA  253 (347)
Q Consensus       231 ~~~-----------~~~~~~~l~~--~G~~v~~g~~  253 (347)
                      ...           ...+++.++.  .++++.++..
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            521           2334444433  3588887654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.18  E-value=0.001  Score=54.70  Aligned_cols=95  Identities=24%  Similarity=0.264  Sum_probs=61.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|||+|++|.+|..+++.+...|++|+++++++++.+.+. .+ ..++..+-.+    .+.+.+..  .++|+||.++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~-~~~~~~Dl~d----~~~~~~~~--~~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EH-LKVKKADVSS----LDEVCEVC--KGADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TT-EEEECCCTTC----HHHHHHHH--TTCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-Cc-eEEEEecCCC----HHHHHHHh--cCCCEEEEeCc
Confidence            58999999999999999999999999999999877543221 11 1222211111    23333333  26899999988


Q ss_pred             cc------------chHHHHhccccC--CEEEEEeec
Q 019049          231 GK------------LTKESLKLLNWG--AQILVIGFA  253 (347)
Q Consensus       231 ~~------------~~~~~~~~l~~~--G~~v~~g~~  253 (347)
                      ..            ....+++.++..  ++++.++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            53            112344555544  488887643

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.17  E-value=0.0029  Score=53.56  Aligned_cols=83  Identities=14%  Similarity=0.181  Sum_probs=54.5

Q ss_pred             CCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049          148 SSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       148 ~~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++|||+|++  +++|..+++.+...|++|++++++....+.+    ++.+....+..+-.+. +.++.+.+..  ..
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADD-AQIDALFASLKTHW   90 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCH-HHHHHHHHHHHHHc
Confidence            468899999998  9999999999999999999998875433333    2344333333222221 2233333321  13


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        91 g~id~lv~nAg~  102 (271)
T 3ek2_A           91 DSLDGLVHSIGF  102 (271)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.16  E-value=0.0014  Score=54.56  Aligned_cols=81  Identities=19%  Similarity=0.194  Sum_probs=51.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCc-EE-EeCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HV-VDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~-~v-~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +++++|+|++|++|..+++.+...|++|+++ .++.++.+.+    +..+.. .. +..+-.+ .+.+++..+..  ..+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE-AEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999999998 7777765543    223432 12 2222111 12233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        80 ~~d~li~~Ag~   90 (245)
T 2ph3_A           80 GLDTLVNNAGI   90 (245)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.16  E-value=0.0096  Score=50.94  Aligned_cols=75  Identities=20%  Similarity=0.301  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ++++++|+|++|++|.+++..+...|++|++++++.++.+.+. ++    +.. ...|..+.      +.+.+..  ..+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~------~~~~~~~--~~~  189 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD------ASRAEAV--KGA  189 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH------HHHHHHT--TTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH------HHHHHHH--HhC
Confidence            6789999998899999999999999999999999987765443 22    321 22343321      2222222  348


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999974

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.16  E-value=0.0022  Score=54.51  Aligned_cols=80  Identities=18%  Similarity=0.234  Sum_probs=54.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +++||+|++|++|..+++.+...|++|+++++++++.+.+. ++.   ....+..+-.+ .+.++...+..  ..+.+|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhCCCCE
Confidence            78999999999999999999999999999999988766553 332   11222222111 22244444332  1246899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus       101 lvnnAG~  107 (272)
T 2nwq_A          101 LINNAGL  107 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.15  E-value=0.0018  Score=53.13  Aligned_cols=91  Identities=23%  Similarity=0.215  Sum_probs=62.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+.+...+...+. |..+.+    .    +..  .++|+||+++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~----~----~~~--~~~d~vi~~ag   71 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLT----E----ADL--DSVDAVVDALS   71 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCC----H----HHH--TTCSEEEECCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEeccccccc----H----hhc--ccCCEEEECCc
Confidence            599999999999999999999999999999998877655444443321 222221    1    222  47899999998


Q ss_pred             cc-----------chHHHHhcccc-CCEEEEEee
Q 019049          231 GK-----------LTKESLKLLNW-GAQILVIGF  252 (347)
Q Consensus       231 ~~-----------~~~~~~~~l~~-~G~~v~~g~  252 (347)
                      ..           ....+++.++. +++++.++.
T Consensus        72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            52           12345555554 468888854

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.15  E-value=0.0034  Score=52.87  Aligned_cols=42  Identities=26%  Similarity=0.206  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence            467999999999999999999999999999999998876654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.15  E-value=0.0011  Score=55.83  Aligned_cols=83  Identities=23%  Similarity=0.253  Sum_probs=51.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHH----HHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIK----FLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~----~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      .++++|||+|+++++|..+++.+...|++|++++ ++.++.+    ..++.+.. ..+..+-.+. +.++...+..  ..
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW-DSTKQAFDKVKAEV   89 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCH-HHHHHHHHHHHHhc
Confidence            4688999999999999999999999999999887 4433332    23344433 2222222221 2233333221  23


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus        90 g~id~lv~~Ag~  101 (256)
T 3ezl_A           90 GEIDVLVNNAGI  101 (256)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.15  E-value=0.0005  Score=56.99  Aligned_cols=103  Identities=18%  Similarity=0.287  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ......++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++    .|...-+.....+..+...   ...
T Consensus        48 ~~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~  122 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE---KLE  122 (233)
T ss_dssp             HHHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH---HHT
T ss_pred             HHHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH---hcc
Confidence            3444568889999998 4 788888888887 6799999999988777754    3532111112222211111   111


Q ss_pred             cCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      ....||+|+.....    ..+..+.+.|+++|+++..
T Consensus       123 ~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          123 LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            23579999876553    3457788999999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.15  E-value=0.0013  Score=55.30  Aligned_cols=82  Identities=24%  Similarity=0.324  Sum_probs=52.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      ++++||+|+++++|..+++.+...  |++|+.+.++.++.+.+. +++....+..-+..-.+.++++.+..  ..+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578999999999999998777666  478999999988776664 34432222111111112233333221  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999884

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.15  E-value=0.004  Score=55.39  Aligned_cols=86  Identities=22%  Similarity=0.247  Sum_probs=54.5

Q ss_pred             cCC-CCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEecChhh----------------HHHHHhcCCcEE-EeCCCCC
Q 019049          145 AQL-SSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEK----------------IKFLKSLGVDHV-VDLSNES  205 (347)
Q Consensus       145 ~~~-~~~~~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~~----------------~~~~~~~g~~~v-~~~~~~~  205 (347)
                      ..+ ..++++||+|+++++|.+.+..+.. .|++|++++++.++                .+.+++.|.... +..+ ..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~D-vt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGD-AF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESC-TT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECC-CC
Confidence            444 5678999999999999999888888 99999998765432                123345564322 2222 11


Q ss_pred             chhhHHHHHHHh--cCCcccEEEeCCCc
Q 019049          206 VIPSVKEFLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       206 ~~~~~~~~~~~~--~~~~~d~v~d~~g~  231 (347)
                      -.+..+.+.+..  ..+++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            112233333221  23579999999875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.14  E-value=0.0018  Score=54.59  Aligned_cols=82  Identities=20%  Similarity=0.251  Sum_probs=52.7

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChh---hHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++  |++|..+++.+...|++|++++++++   ..+.+. +.+....+..+-.+. +.++.+.+..  ..+
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            46899999998  89999999998889999999998875   233332 234333332222221 2233332221  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        86 ~iD~lv~~Ag~   96 (261)
T 2wyu_A           86 GLDYLVHAIAF   96 (261)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.13  E-value=0.0013  Score=56.00  Aligned_cols=81  Identities=22%  Similarity=0.304  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .++++||+|++|++|...+..+...|++|++++++.++.+.+.    ..+.. ..+..+-.+. +.+++..+..  ..+.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP-KSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH-HHHHHHHHHHHHHhCC
Confidence            4789999999999999999988888999999998876544332    23432 2222221111 1233322221  1146


Q ss_pred             ccEEEeCCC
Q 019049          222 VDVLYDPVG  230 (347)
Q Consensus       222 ~d~v~d~~g  230 (347)
                      +|++|+++|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            899999887

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.13  E-value=0.0024  Score=58.29  Aligned_cols=90  Identities=21%  Similarity=0.181  Sum_probs=69.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.|++|.|+|. |.+|..+++.++.+|++|++++++..+...+...|+.. .     +    .++..     ...|+|+.
T Consensus       255 l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~-----~----l~ell-----~~aDiVi~  318 (479)
T 1v8b_A          255 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-V-----T----LDEIV-----DKGDFFIT  318 (479)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-C-----C----HHHHT-----TTCSEEEE
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-c-----C----HHHHH-----hcCCEEEE
Confidence            47899999999 99999999999999999999999988654555666532 1     1    22222     46899999


Q ss_pred             CCCccc-h-HHHHhccccCCEEEEEeec
Q 019049          228 PVGGKL-T-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       228 ~~g~~~-~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      +++... + ...+..|+++..++.++..
T Consensus       319 ~~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          319 CTGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             CCChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            976633 3 5788999999999988754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.13  E-value=0.0019  Score=54.76  Aligned_cols=83  Identities=19%  Similarity=0.280  Sum_probs=51.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~  219 (347)
                      ..+++++|+|+++++|..+++.+...|++|++++ ++.++.+..    +..+.. .++..+-.+. +.++.+.+..  ..
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADF-ESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999998 444443332    223322 2222221121 2233333221  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +++|++++++|.
T Consensus       102 g~id~li~nAg~  113 (269)
T 3gk3_A          102 GKVDVLINNAGI  113 (269)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999883

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.12  E-value=0.0022  Score=54.01  Aligned_cols=80  Identities=23%  Similarity=0.325  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++... .+    +.+... .+  |..+.   +.++.+.+..  .
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT---DIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH---HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCH---HHHHHHHHHHHHh
Confidence            46799999999999999999999999999999986543322 22    224322 22  22222   2233333221  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|++++++|.
T Consensus        90 ~~~id~li~~Ag~  102 (265)
T 1h5q_A           90 LGPISGLIANAGV  102 (265)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3479999999884

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.12  E-value=0.003  Score=53.34  Aligned_cols=98  Identities=19%  Similarity=0.175  Sum_probs=68.3

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ...||+...+...+.+..---.|++++|.|.++.+|..+++++...|++|++..+..                   .+  
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~--  197 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------------TD--  197 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SS--
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------hh--
Confidence            345655555555554433334789999999966699999999999999988775431                   11  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        +++..     ..+|+++.++|.+.+ --.++++++..++.+|...
T Consensus       198 --L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          198 --LKSHT-----TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             --HHHHH-----TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             --HHHhc-----ccCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence              22221     478999999997644 2236789998999887553

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.12  E-value=0.0013  Score=55.78  Aligned_cols=74  Identities=22%  Similarity=0.269  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE--eCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|+++++++++     ...+ ..+  |..+.   +.++...+..  ..+++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~-~~~~~Dl~~~---~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKY-DHIECDVTNP---DQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSS-EEEECCTTCH---HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCce-EEEEecCCCH---HHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999987664     1111 222  32222   1223222211  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        78 lv~~Ag~   84 (264)
T 2dtx_A           78 LVNNAGI   84 (264)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.12  E-value=0.0051  Score=50.30  Aligned_cols=92  Identities=20%  Similarity=0.165  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|||+|+ |.+|...++.+...|++|++++.... ..+.+.+.|....+.   ..+..        ..-.++|+||-
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~---~~~~~--------~dL~~adLVIa   97 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKR---KKVGE--------EDLLNVFFIVV   97 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEEC---SCCCG--------GGSSSCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEE---CCCCH--------hHhCCCCEEEE
Confidence            5789999999 99999999999999999999987543 233333333222221   12210        01257999999


Q ss_pred             CCCccchHHHHhccccCCEEEEEee
Q 019049          228 PVGGKLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      +++.+..+..+......|..|.+..
T Consensus        98 AT~d~~~N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A           98 ATNDQAVNKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             CCCCTHHHHHHHHHSCTTCEEEC--
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEeC
Confidence            9998776554443344787776543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.11  E-value=0.004  Score=48.85  Aligned_cols=99  Identities=18%  Similarity=0.215  Sum_probs=68.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh----cCCc-EE-EeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVD-HV-VDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~----~g~~-~v-~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++    .|.. .+ +..+....   ..    
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---~~----   89 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRA---FD----   89 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGG---GG----
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhh---hh----
Confidence            4567789999999998 5 488888988887 5699999999987777753    3443 22 22121111   10    


Q ss_pred             HhcCCcccEEEeCCCc---cchHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g  251 (347)
                       .....||+|+.....   ..+..+.+.|+++|+++...
T Consensus        90 -~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           90 -DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             -GCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             -ccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence             011579999976543   35788999999999998764

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.11  E-value=0.001  Score=55.21  Aligned_cols=100  Identities=21%  Similarity=0.302  Sum_probs=69.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ....+.++++||.+|+ | .|..+..+++..+.+|++++.+++..+.+++    .|...+ .....+...      ....
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d~~~------~~~~  155 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILGDGSK------GFPP  155 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGG------CCGG
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECCccc------CCCC
Confidence            4567889999999998 5 7888889998877899999999987777754    443221 111111100      0011


Q ss_pred             CCcccEEEeCCCcc-chHHHHhccccCCEEEEEe
Q 019049          219 LKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       219 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  251 (347)
                      ...||+|+.+..-. ....+.+.|+++|+++..-
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            23599999876654 4478889999999998753

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.10  E-value=0.0034  Score=51.10  Aligned_cols=100  Identities=21%  Similarity=0.316  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ....+.++++||.+|+ | .|..+..+++..|  .+|++++.+++..+.+++    .|...+ .....+.....      
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d~~~~~------  141 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVGDGTLGY------  141 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEESCGGGCC------
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEECCcccCC------
Confidence            5567889999999998 5 5888889998886  799999999987777754    232211 11111110000      


Q ss_pred             hcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEe
Q 019049          217 RKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  251 (347)
                      .....||+|+.+..-. ....+.++|+++|+++..-
T Consensus       142 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          142 EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            1135799999876654 3478889999999998764

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.10  E-value=0.0092  Score=48.05  Aligned_cols=98  Identities=15%  Similarity=0.262  Sum_probs=69.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++++||-.|+ | .|..+..+++.. ..+|++++.+++..+.+++    .|..  .++..+..+.   .     
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~-----  103 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---L-----  103 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT---C-----
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh---h-----
Confidence            5667889999999998 4 488888888885 3699999999998877754    3432  2222222111   0     


Q ss_pred             HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                       .....+|+|+.....    ..+..+.+.|+++|+++...
T Consensus       104 -~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          104 -DDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             -TTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             -hcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence             012469999977652    45678889999999999864

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.10  E-value=0.0028  Score=53.49  Aligned_cols=97  Identities=15%  Similarity=0.142  Sum_probs=68.3

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  208 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (347)
                      ..||+...+...+.+...--.|++++|.|.++.+|..+++++...|++|++..+...                   +   
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~-------------------~---  196 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK-------------------D---  196 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------C---
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch-------------------h---
Confidence            355555555555544333347999999999677999999999999999988765321                   1   


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                       +++..     ..+|+++.++|.+.+ ---++++++..++.+|...
T Consensus       197 -L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          197 -LSLYT-----RQADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             -HHHHH-----TTCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             -HHHHh-----hcCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence             22221     468999999997644 2236789998999888654

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.09  E-value=0.0011  Score=55.05  Aligned_cols=102  Identities=14%  Similarity=0.186  Sum_probs=68.3

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...+.++++||-+|+ | .|..+..+++..  +.+|++++.+++..+.+++    .|....+.....+.   .+......
T Consensus        55 l~~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~~~~  129 (239)
T 2hnk_A           55 LTKISGAKRIIEIGT-F-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA---LETLQVLI  129 (239)
T ss_dssp             HHHHHTCSEEEEECC-T-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH---HHHHHHHH
T ss_pred             HHHhhCcCEEEEEeC-C-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH---HHHHHHHH
Confidence            445567889999998 4 688889999987  5799999999987777754    35432112222232   11111121


Q ss_pred             c-------------C-CcccEEEeCCCcc----chHHHHhccccCCEEEEE
Q 019049          218 K-------------L-KGVDVLYDPVGGK----LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~-------------~-~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~  250 (347)
                      .             . ..||+|+...+.+    .+..+.++|+++|.++..
T Consensus       130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          130 DSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             HCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            1             1 5799999776543    457788999999999874

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.08  E-value=0.0024  Score=58.57  Aligned_cols=91  Identities=20%  Similarity=0.225  Sum_probs=69.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      -.|++|.|+|. |.+|..+++.++.+|++|+++++++.+...+...|+...      +    .++..     ...|+|+.
T Consensus       275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~------~----l~ell-----~~aDiVi~  338 (494)
T 3d64_A          275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVV------T----MEYAA-----DKADIFVT  338 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEEC------C----HHHHT-----TTCSEEEE
T ss_pred             cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeC------C----HHHHH-----hcCCEEEE
Confidence            47889999999 999999999999999999999999876544555665321      1    22222     46899999


Q ss_pred             CCCcc-ch-HHHHhccccCCEEEEEeecC
Q 019049          228 PVGGK-LT-KESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       228 ~~g~~-~~-~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +++.. .+ ...+..|+++..++.++...
T Consensus       339 ~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          339 ATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             CSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             CCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            98753 33 57889999999999887543

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.06  E-value=0.0026  Score=53.31  Aligned_cols=101  Identities=16%  Similarity=0.249  Sum_probs=71.7

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      .....+.++++||-.|+ |. |..+..+++..  +.+|++++.+++..+.+++    .|....+.....++.       +
T Consensus        86 ~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-------~  156 (255)
T 3mb5_A           86 VAYAGISPGDFIVEAGV-GS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY-------E  156 (255)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG-------G
T ss_pred             HHhhCCCCCCEEEEecC-Cc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh-------h
Confidence            35678899999999998 43 88888888885  5699999999988777754    353321121222221       1


Q ss_pred             HhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ......||+|+...+.  ..+..+.+.|+++|+++...
T Consensus       157 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          157 GIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            1234569999987665  36789999999999998753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.06  E-value=0.0014  Score=54.55  Aligned_cols=77  Identities=16%  Similarity=0.160  Sum_probs=50.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH----HhcCCccc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK----ARKLKGVD  223 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----~~~~~~~d  223 (347)
                      ..++++||.|++|++|..+++.+...|++|+++++++++.+     +....+ .-+..-.+.+++..+    ..+.+++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~-~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIV-KMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEEC-CCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEE-EcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45789999999999999999999999999999999876432     111111 111111122333322    22215799


Q ss_pred             EEEeCCC
Q 019049          224 VLYDPVG  230 (347)
Q Consensus       224 ~v~d~~g  230 (347)
                      ++++++|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999988

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.06  E-value=0.00082  Score=56.45  Aligned_cols=97  Identities=24%  Similarity=0.292  Sum_probs=64.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d  227 (347)
                      ++++||.|++|++|..+++.+...|++|++++++.++.+.     ....++..+.   +.++.+.+..  ..+++|++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----~~~~~d~~d~---~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----HSFTIKDSGE---EEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----EEEECSCSSH---HHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----cceEEEeCCH---HHHHHHHHHHHHHcCCCCEEEE
Confidence            6799999999999999999999999999999998764321     1112222221   2233443332  2357999999


Q ss_pred             CCCc----c-----------------------chHHHHhccccCCEEEEEeecC
Q 019049          228 PVGG----K-----------------------LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       228 ~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      ++|.    .                       ..+.++..++++|+++.++...
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  147 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA  147 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence            9983    0                       0122344566778999987654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.06  E-value=0.0044  Score=53.95  Aligned_cols=81  Identities=26%  Similarity=0.336  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---------ChhhHHH----HHhcCCcEEEeCCCCCc-hhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---------GAEKIKF----LKSLGVDHVVDLSNESV-IPSVKEFL  214 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---------~~~~~~~----~~~~g~~~v~~~~~~~~-~~~~~~~~  214 (347)
                      .+++++|+|++|++|..+++.+...|++|+++++         +.++.+.    ++..+...+.|..+..- ....+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999743         4444433    23345444566655432 11122233


Q ss_pred             HHhcCCcccEEEeCCCc
Q 019049          215 KARKLKGVDVLYDPVGG  231 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~  231 (347)
                      +.  .+++|++|+++|.
T Consensus        88 ~~--~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DT--FGRIDVVVNNAGI  102 (319)
T ss_dssp             HH--TSCCCEEEECCCC
T ss_pred             HH--cCCCCEEEECCCC
Confidence            32  3479999999883

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.06  E-value=0.0021  Score=54.52  Aligned_cols=76  Identities=28%  Similarity=0.411  Sum_probs=50.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVD  223 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d  223 (347)
                      ..+++|||+|+++++|.++++.+...|++|++++++.++..     +....+  |..+.+   .++++.+..  ..+++|
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~---~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEE---EVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHH---HHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHH---HHHHHHHHHHHHcCCCC
Confidence            46889999999999999999999999999999998765431     122222  333221   233332221  124799


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      ++++++|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=97.05  E-value=0.0013  Score=57.58  Aligned_cols=76  Identities=24%  Similarity=0.237  Sum_probs=52.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-----C--CcEE--EeCCCCCchhhHHHHHHHhc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-----G--VDHV--VDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-----g--~~~v--~~~~~~~~~~~~~~~~~~~~  218 (347)
                      -++.+|||+|++|.+|..+++.+...|++|++++++.++.+.+...     +  ...+  .|..+.+.   +.++   . 
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~---~-   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA---YDEV---I-   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT---TTTT---T-
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH---HHHH---H-
Confidence            3578999999999999999999888999999999988765544321     2  2222  24333322   1111   1 


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                       .++|+||.+++.
T Consensus        82 -~~~d~vih~A~~   93 (342)
T 1y1p_A           82 -KGAAGVAHIASV   93 (342)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -cCCCEEEEeCCC
Confidence             278999999874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.05  E-value=0.0035  Score=53.64  Aligned_cols=82  Identities=16%  Similarity=0.214  Sum_probs=52.7

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChh---hHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|++  |++|..+++.+...|++|++++++.+   ..+.+. +.+....+..+-.+. +.++.+.+..  ..+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLD-EDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            57899999998  89999999999999999999998874   233332 234222332221111 2233333221  134


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        99 ~iD~lv~~Ag~  109 (285)
T 2p91_A           99 SLDIIVHSIAY  109 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.05  E-value=0.0013  Score=54.83  Aligned_cols=75  Identities=19%  Similarity=0.089  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+++|||+|++|.+|..+++.+...  |++|+++++++++.+.+ ..+... +..+-.+    .+.+.+..  .++|++|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~-~~~D~~d----~~~~~~~~--~~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADV-FIGDITD----ADSINPAF--QGIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTE-EECCTTS----HHHHHHHH--TTCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeE-EEecCCC----HHHHHHHH--cCCCEEE
Confidence            4679999999999999999998888  89999999987765433 112222 2222111    22333333  3689999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        75 ~~a~~   79 (253)
T 1xq6_A           75 ILTSA   79 (253)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            99873

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.04  E-value=0.0057  Score=52.62  Aligned_cols=92  Identities=22%  Similarity=0.169  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-HhcCCc--EEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+ ++++..  .+.+         .....+..  ..+|+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---------~~~~~~~~--~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---------LAEAETRL--AEYDI  207 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---------HHHHHHTG--GGCSE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---------HHHHHhhh--ccCCE
Confidence            5789999999 9999999999999998 999999998886555 456542  1221         12222222  46899


Q ss_pred             EEeCCCccchH------HHHhccccCCEEEEEee
Q 019049          225 LYDPVGGKLTK------ESLKLLNWGAQILVIGF  252 (347)
Q Consensus       225 v~d~~g~~~~~------~~~~~l~~~G~~v~~g~  252 (347)
                      |++|++.....      .....++++..++++..
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99999864321      11345677776766643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.04  E-value=0.0014  Score=52.88  Aligned_cols=63  Identities=29%  Similarity=0.429  Sum_probs=46.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +++|.|++|++|...++.+. .|++|++++++.+          ....|..+.   +.+++..+..  +++|++++++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~---~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNI---DSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCH---HHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCH---HHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999999888 8999999998754          122233332   2244444433  47899999987

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.04  E-value=0.00052  Score=57.40  Aligned_cols=79  Identities=20%  Similarity=0.301  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH--HHHHH-hcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK--EFLKA-RKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~~~-~~~~~~d~v  225 (347)
                      .++++||+|++|++|..+++.+.. |++|++++++.++.+.+.+......+..   +..+...  ...+. ...+++|++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIES---DIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEEC---CHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceec---ccchHHHHHHHHHHHHhcCCCCEE
Confidence            468999999999999999888766 9999999999988877766432222221   1100000  00000 122478999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        80 v~~Ag~   85 (245)
T 3e9n_A           80 VHAAAV   85 (245)
T ss_dssp             EECC--
T ss_pred             EECCCc
Confidence            999884

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.04  E-value=0.0051  Score=57.22  Aligned_cols=82  Identities=15%  Similarity=0.237  Sum_probs=54.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhh-------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEK-------IKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~-------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      +++++++||+|++|++|..++..+...|+ +|+++.++..+       .+.+++.|....+..-+..-.+.+.++.+.  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            46789999999999999999998888999 68888887531       123344564332221222222224444433  


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                       ..+|+||+++|.
T Consensus       334 -~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 -YPPNAVFHTAGI  345 (511)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEECCcc
Confidence             579999999884

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.04  E-value=0.0033  Score=50.96  Aligned_cols=97  Identities=11%  Similarity=0.067  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ....+.++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++    .|..  .+...+....   .      
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~------  138 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG---W------  138 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---C------
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC---C------
Confidence            5667889999999998 4 58888888887 8899999999988777754    3432  2222111111   0      


Q ss_pred             hcCCcccEEEeCCCccc-hHHHHhccccCCEEEEEe
Q 019049          217 RKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIG  251 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g  251 (347)
                      .....||+|+.+..-.. ...+.+.|+++|+++..-
T Consensus       139 ~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          139 QARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             GGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             ccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            12357999998765433 467889999999998753

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.02  E-value=0.0049  Score=49.23  Aligned_cols=99  Identities=16%  Similarity=0.091  Sum_probs=63.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcC----------CEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHH
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCG----------ATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEF  213 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g----------~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~  213 (347)
                      ..+.++++||-.|+ |. |..+..+++..|          .+|++++.++.+.     ......+ ..+-.. ......+
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~-~~~~~~~   89 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTD-PRTSQRI   89 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTS-HHHHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCC-HHHHHHH
Confidence            44688999999998 65 889999999876          7899999987421     1111222 111111 1112233


Q ss_pred             HHHhcCCcccEEEe-----CCCc-------------cchHHHHhccccCCEEEEEe
Q 019049          214 LKARKLKGVDVLYD-----PVGG-------------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       214 ~~~~~~~~~d~v~d-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      .....+..||+|+.     +++.             ..+..+.+.|+++|+++...
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            33444557999994     3332             23456789999999998753

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.02  E-value=0.0043  Score=52.38  Aligned_cols=97  Identities=16%  Similarity=0.129  Sum_probs=68.3

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  208 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (347)
                      ..||+...+...|....---.|++++|.|.++.+|..+++++...|++|++..+..                   .+   
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------------~~---  197 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------------RD---  197 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------------SC---
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------------cC---
Confidence            45555555555554433334799999999967799999999999999998876421                   11   


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                       +++..     ..+|+++.++|.+.+ ---++++++..++.+|...
T Consensus       198 -L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          198 -LADHV-----SRADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             -HHHHH-----HTCSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred             -HHHHh-----ccCCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence             22222     367999999997644 2236789999999988654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.02  E-value=0.0033  Score=53.32  Aligned_cols=88  Identities=19%  Similarity=0.224  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-HhcCC--cEEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGV--DHVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~-~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+ ++++.  ..+..+.+  .           ....+|+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~--l-----------~~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA--L-----------EGQSFDI  184 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG--G-----------TTCCCSE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH--h-----------cccCCCE
Confidence            5789999999 9999999999999997 999999999887655 34543  12222111  1           1157899


Q ss_pred             EEeCCCccchH----HHHhccccCCEEEEE
Q 019049          225 LYDPVGGKLTK----ESLKLLNWGAQILVI  250 (347)
Q Consensus       225 v~d~~g~~~~~----~~~~~l~~~G~~v~~  250 (347)
                      |++|++.....    .-.+.++++..++++
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~Dl  214 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYEL  214 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEES
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            99999853211    123456666665554

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.01  E-value=0.0062  Score=52.49  Aligned_cols=102  Identities=15%  Similarity=0.125  Sum_probs=71.1

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +.....++++++||-+|+ | .|..+..+++..|++|++++.+++..+.+++    .|...-+.....++.    .    
T Consensus        64 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~----  133 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC-G-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE----E----  133 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG----G----
T ss_pred             HHHHcCCCCcCEEEEeec-c-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH----H----
Confidence            445677899999999998 4 4888999999889999999999998777754    343211111112221    1    


Q ss_pred             hcCCcccEEEeCCCc----------------cchHHHHhccccCCEEEEEeec
Q 019049          217 RKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      . .+.||+|+....-                ..+..+.++|+|+|++++....
T Consensus       134 ~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          134 F-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             c-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            1 4679999864321                2357788999999999987654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.01  E-value=0.0037  Score=52.76  Aligned_cols=85  Identities=21%  Similarity=0.254  Sum_probs=61.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++++|+|+ |++|.+++..+...|.+|++..++.+|.+.+.++|.. ...+.  ++             ..+|+||+|+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~--~l-------------~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEP--PK-------------SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSC--CS-------------SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHH--Hh-------------ccCCEEEEcc
Confidence            889999999 9999999999999999999999999987666577743 22222  11             2789999998


Q ss_pred             Ccc-----chH-H-HHhccccCCEEEEEe
Q 019049          230 GGK-----LTK-E-SLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~~-----~~~-~-~~~~l~~~G~~v~~g  251 (347)
                      +..     .+. . +.+.++++..++++-
T Consensus       181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          181 SASLHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             TTCCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             cCCCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence            742     221 2 223567777776653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.01  E-value=0.0043  Score=53.88  Aligned_cols=88  Identities=19%  Similarity=0.089  Sum_probs=64.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+|.|+|. |.+|...++.++..|.  +|++.++++++.+.+.+.|.......+..+ .            -...|+||.
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~------------~~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVE------------DFSPDFVML  100 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGG------------GGCCSEEEE
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHh------------hccCCEEEE
Confidence            68999998 9999999999999998  999999999999999888863211111111 1            146899999


Q ss_pred             CCCccch----HHHHhccccCCEEEEEe
Q 019049          228 PVGGKLT----KESLKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~~~~----~~~~~~l~~~G~~v~~g  251 (347)
                      |+.....    ..+...++++..++.++
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEECC
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEECC
Confidence            9987443    34455677777666654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.00  E-value=0.0039  Score=52.33  Aligned_cols=95  Identities=8%  Similarity=0.056  Sum_probs=68.3

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  208 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (347)
                      .+||+.......+....  -.|++++|.|.++.+|..+++++...|++|++..+..                   .+   
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------------~~---  186 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------------KD---  186 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SC---
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------cc---
Confidence            45666666666665554  5899999999966799999999999999999886531                   12   


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                       +++..     ..+|++|.++|.+.+ ---++++++..++.+|...
T Consensus       187 -L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          187 -IGSMT-----RSSKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             -HHHHH-----HHSSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred             -HHHhh-----ccCCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence             22222     357999999997543 1225679999999887654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.00  E-value=0.00092  Score=58.57  Aligned_cols=81  Identities=17%  Similarity=0.126  Sum_probs=51.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHhc------CCc-EEEeCCCCCchhhHHHHHHHhc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSL------GVD-HVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~~~~------g~~-~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      +++++|+|++|++|..++..+...|++|+++.++..+.    +.++..      +.. .++..+ ..-.+.++...+...
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD-VRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECC-TTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEec-CCCHHHHHHHHHHHh
Confidence            57899999999999999999999999887776543321    222221      222 222222 122233555555444


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|++++++|.
T Consensus        81 ~g~iD~lVnnAG~   93 (327)
T 1jtv_A           81 EGRVDVLVCNAGL   93 (327)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            4679999999873

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.99  E-value=0.0021  Score=56.41  Aligned_cols=79  Identities=11%  Similarity=0.088  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH----HHh-cCC-cEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF----LKS-LGV-DHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~----~~~-~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.++...    +.. .+. ..++.. +..-.+.+.+..+   ..++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d~~~~~~~~~---~~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHET-DVSDERALARIFD---AHPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECC-CTTCHHHHHHHHH---HSCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEe-ecCCHHHHHHHHh---ccCC
Confidence            46799999999999999999999999999999986543221    111 122 122221 2111122333333   2479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+++++++.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999984

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.98  E-value=0.0023  Score=54.01  Aligned_cols=81  Identities=11%  Similarity=0.176  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.. ..+.+++    .+.. .++..+-.+ .+.++++.+..  ..+
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            3579999999999999999999999999999876544 3333332    2222 222222111 12233333221  124


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      ++|++++++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999998

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.97  E-value=0.0026  Score=53.42  Aligned_cols=100  Identities=11%  Similarity=0.068  Sum_probs=70.2

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhc-----CCcEEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL-----GVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.     |...+ .....++.+.      
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~d~~~~------  160 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLGKLEEA------  160 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEESCGGGC------
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEECchhhc------
Confidence            5677899999999998 5 488888999885  56999999999888777653     52221 1111122100      


Q ss_pred             HhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ......+|+|+...+.  ..+..+.++|+++|+++.+.
T Consensus       161 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          161 ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            0123579999976654  45788999999999999864

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.96  E-value=0.006  Score=51.88  Aligned_cols=98  Identities=19%  Similarity=0.221  Sum_probs=68.0

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  208 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (347)
                      ..||+...+...|.+..---.|++++|+|.++.+|..+++++...|++|++..+.....+                    
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~--------------------  203 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED--------------------  203 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH--------------------
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch--------------------
Confidence            356655556655544433347999999999667999999999999999998876322111                    


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeec
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                       .++..     ..+|++|.++|.+.+ ---++++++..++.++..
T Consensus       204 -l~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          204 -MIDYL-----RTADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             -HHHHH-----HTCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             -hhhhh-----ccCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence             00111     367999999997643 123568999999998865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.95  E-value=0.0063  Score=53.59  Aligned_cols=176  Identities=14%  Similarity=0.074  Sum_probs=95.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc-CC-EEEEEecChhhHHHHHh-cC--CcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVC-GA-TIIAVARGAEKIKFLKS-LG--VDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~-g~-~V~~~~~~~~~~~~~~~-~g--~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .+++|||+||+|.+|..+++.+... |+ +|+++++++.+.+.+.+ +.  ....+..+-.+    .+.+.+..  .++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~l~~~~--~~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD----LERLNYAL--EGVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC----HHHHHHHT--TTCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC----HHHHHHHH--hcCC
Confidence            5789999999999999999888888 98 99999998877665542 32  11222222111    23333333  3799


Q ss_pred             EEEeCCCccch------------------HHHHhccccC--CEEEEEeecCCCCCCcchhH-------h---hh-----c
Q 019049          224 VLYDPVGGKLT------------------KESLKLLNWG--AQILVIGFASGEIPVIPANI-------A---LV-----K  268 (347)
Q Consensus       224 ~v~d~~g~~~~------------------~~~~~~l~~~--G~~v~~g~~~~~~~~~~~~~-------~---~~-----~  268 (347)
                      +||.+++....                  ..+++++.+.  ++++.++......+...+..       +   +.     .
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~  173 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSS  173 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCCCSS
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999984211                  1233333333  58888875432222111111       1   11     2


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCc--eeee----eceeeChhhHHHHHHHHHcCCcceeEE
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL--ITIH----ISHTYSPSEANLAFSAIEDRKVIGKVM  334 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--l~~~----~~~~~~~~~~~~a~~~~~~~~~~gk~v  334 (347)
                      ++.+.....+.......    ..+..+.+.+.+|.  +...    .......+|+-+++..+.+....|.+.
T Consensus       174 g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~  241 (344)
T 2gn4_A          174 QTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIF  241 (344)
T ss_dssp             CCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEE
T ss_pred             CcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEE
Confidence            35555555444332221    12334445555565  3321    112356778777776655443345544

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.95  E-value=0.0066  Score=53.29  Aligned_cols=97  Identities=19%  Similarity=0.285  Sum_probs=62.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-------------eCCCCCchhhHHHHH
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-------------DLSNESVIPSVKEFL  214 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-------------~~~~~~~~~~~~~~~  214 (347)
                      -.|++|.|.|. |.+|..+++.++.+|++|++.+.++.+.++++++|+..+-             ........  -.+..
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I--~~~~~  249 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVI--TTEVA  249 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCB--CHHHH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhc--CHHHH
Confidence            37899999999 9999999999999999999999887765666677764331             00000000  00111


Q ss_pred             HHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEE
Q 019049          215 KARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~  250 (347)
                      ..   -+.++|++++..+.. +++.+.|..+|.++..
T Consensus       250 ~~---lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~P  283 (355)
T 1c1d_A          250 RT---LDCSVVAGAANNVIADEAASDILHARGILYAP  283 (355)
T ss_dssp             HH---CCCSEECCSCTTCBCSHHHHHHHHHTTCEECC
T ss_pred             hh---CCCCEEEECCCCCCCCHHHHHHHHhCCEEEEC
Confidence            11   135677777766554 3566777777766543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.94  E-value=0.001  Score=56.17  Aligned_cols=76  Identities=20%  Similarity=0.330  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE--eCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+..   . ...+  |..+.   +.++++.+..  ..+++|+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~-~~~~~~Dv~d~---~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---D-IHTVAGDISKP---ETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---T-EEEEESCTTSH---HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---c-eEEEEccCCCH---HHHHHHHHHHHHHCCCCCE
Confidence            578999999999999999999999999999999876542211   1 1122  22222   2233332211  1247999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus       100 lv~nAg~  106 (260)
T 3un1_A          100 LVNNAGV  106 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.93  E-value=0.002  Score=53.93  Aligned_cols=101  Identities=15%  Similarity=0.234  Sum_probs=66.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...+.++++||-+|+  +.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+.    .+.....
T Consensus        58 l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~----~~~l~~~  131 (248)
T 3tfw_A           58 LVRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA----LQSLESL  131 (248)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH----HHHHHTC
T ss_pred             HHhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH----HHHHHhc
Confidence            344567899999998  3588888888887  5699999999988777754    35331111122222    2222222


Q ss_pred             -cCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 -KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 -~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                       ....||+|+-....    ..+..+.++|+++|.++.-
T Consensus       132 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~  169 (248)
T 3tfw_A          132 GECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD  169 (248)
T ss_dssp             CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             CCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence             23479999854433    3467788999999988874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.92  E-value=0.0034  Score=53.56  Aligned_cols=96  Identities=26%  Similarity=0.236  Sum_probs=63.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +|||+|++|.+|..+++.+...  |++|+++++++++.+.+...+...+ ..+-.+    .+.+.+..  .++|+||.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~-~~D~~d----~~~l~~~~--~~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVR-HGDYNQ----PESLQKAF--AGVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEE-ECCTTC----HHHHHHHT--TTCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEE-EeccCC----HHHHHHHH--hcCCEEEEcC
Confidence            6999999999999999888887  8999999998876665555554332 222111    23333333  3689999998


Q ss_pred             Ccc--------chHHHHhccccC--CEEEEEeecC
Q 019049          230 GGK--------LTKESLKLLNWG--AQILVIGFAS  254 (347)
Q Consensus       230 g~~--------~~~~~~~~l~~~--G~~v~~g~~~  254 (347)
                      +..        ....+++.++..  ++++.++...
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            842        112344444443  4888887543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.92  E-value=0.00039  Score=58.28  Aligned_cols=76  Identities=28%  Similarity=0.321  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      .++++||.|++|++|..+++.+...|++|++++++.++.+.+.  +  ...|..+.+.   +++..+..  ..+++|+++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~---~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDA---VDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHH---HHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHH---HHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999998765433221  1  2234333221   23322211  124789999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99884

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.92  E-value=0.0041  Score=52.03  Aligned_cols=77  Identities=18%  Similarity=0.232  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      .++++||+|++|++|...++.+...|++|++++++.+.    ++.+. ..+..+-.+. +.++...+..  ..+++|+++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~-~~~~~D~~d~-~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYPF-ATEVMDVADA-AQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCSS-EEEECCTTCH-HHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCCc-eEEEcCCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999987652    22342 2222221111 1233333221  134799999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99884

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.92  E-value=0.013  Score=43.76  Aligned_cols=76  Identities=16%  Similarity=0.239  Sum_probs=53.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+++ +|... +..+..+    ... +....-.++|+++.|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~~----~~~-l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALV-INGDCTK----IKT-LEDAGIEDADMYIAV   76 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEE-EESCTTS----HHH-HHHTTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEE-EEcCCCC----HHH-HHHcCcccCCEEEEe
Confidence            358999998 999999999999999999999999888777764 56533 2222211    122 222233579999999


Q ss_pred             CCcc
Q 019049          229 VGGK  232 (347)
Q Consensus       229 ~g~~  232 (347)
                      ++..
T Consensus        77 ~~~~   80 (140)
T 1lss_A           77 TGKE   80 (140)
T ss_dssp             CSCH
T ss_pred             eCCc
Confidence            9874

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.91  E-value=0.0044  Score=52.86  Aligned_cols=88  Identities=19%  Similarity=0.132  Sum_probs=62.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCC-cccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLK-GVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~v~d  227 (347)
                      .+|.|+|+ |.+|...++.+...|.  +|++.++++++.+.+++.|.......   +..+    .     -. ..|+|+.
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~---~~~~----~-----~~~~aDvVil   68 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT---SIAK----V-----EDFSPDFVML   68 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES---CGGG----G-----GGTCCSEEEE
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC---CHHH----H-----hcCCCCEEEE
Confidence            37999998 9999999999998898  99999999998888888886421111   1100    0     13 6899999


Q ss_pred             CCCccch----HHHHhccccCCEEEEEe
Q 019049          228 PVGGKLT----KESLKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~~~~----~~~~~~l~~~G~~v~~g  251 (347)
                      |+.....    ..+...++++..++.++
T Consensus        69 avp~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           69 SSPVRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             cCCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            9987433    33445667776666544

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.91  E-value=0.013  Score=50.77  Aligned_cols=93  Identities=15%  Similarity=0.187  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecC---hhhHHHHH-hc----CC-cEEEeCCCCCchhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG---AEKIKFLK-SL----GV-DHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~---~~~~~~~~-~~----g~-~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.++   .++.+.+. ++    +. ..+.++.+      .+.+.+.. 
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~------~~~l~~~l-  224 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED------HEQLRKEI-  224 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC------HHHHHHHH-
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch------HHHHHhhh-
Confidence            6889999999 9999999999999999 89999999   66655442 22    22 12333332      11222222 


Q ss_pred             CCcccEEEeCCCccchH------H-HHhccccCCEEEEE
Q 019049          219 LKGVDVLYDPVGGKLTK------E-SLKLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~g~~~~~------~-~~~~l~~~G~~v~~  250 (347)
                       ..+|+||+|++.....      . ....++++..++++
T Consensus       225 -~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dl  262 (315)
T 3tnl_A          225 -AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDV  262 (315)
T ss_dssp             -HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEES
T ss_pred             -cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEe
Confidence             3689999998742211      1 23456665555443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.89  E-value=0.0064  Score=54.89  Aligned_cols=95  Identities=17%  Similarity=0.248  Sum_probs=71.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +.+|+|.|. |.+|..+++.++..|.+|++++.++++.+.+++.|...++ .+..+     ..+++..+-..+|+++-++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~-----~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-GDATR-----MDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-SCTTC-----HHHHHHTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-cCCCC-----HHHHHhcCCCccCEEEECC
Confidence            457999999 9999999999999999999999999999999998875443 23222     2345555667899999999


Q ss_pred             Cccch----HHHHhccccCCEEEEEe
Q 019049          230 GGKLT----KESLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~~~~----~~~~~~l~~~G~~v~~g  251 (347)
                      +++..    -...+.+.+.-+++...
T Consensus        77 ~~~~~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CChHHHHHHHHHHHHhCCCCeEEEEE
Confidence            97432    23445566666666544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.88  E-value=0.0061  Score=51.84  Aligned_cols=97  Identities=15%  Similarity=0.115  Sum_probs=66.6

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  208 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  208 (347)
                      .+||+.......+.+..---.|++++|+|++..+|.-+++++...|++|++..+..                   .+   
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~---  201 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------------AH---  201 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SS---
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc-------------------cc---
Confidence            44555444444443322223789999999955799999999999999999886331                   11   


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                       +.+..     ..+|++|.++|.+.+ ---++++++..++.+|.+.
T Consensus       202 -L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          202 -LDEEV-----NKGDILVVATGQPEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             -HHHHH-----TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred             -HHHHh-----ccCCEEEECCCCccc-CCHHHcCCCcEEEEccCCC
Confidence             22222     478999999998654 2335688999999988653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.88  E-value=0.00053  Score=57.47  Aligned_cols=71  Identities=25%  Similarity=0.283  Sum_probs=46.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++|||+|++|++|..++..+...|++|+++++++++.+.      ....|..+   .+.++...+.. .+++|++++++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~D~~~---~~~~~~~~~~~-~~~~d~vi~~Ag   71 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------DLSTPGGR---ETAVAAVLDRC-GGVLDGLVCCAG   71 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHH---HHHHHHHHHHH-TTCCSEEEECCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------cccCCccc---HHHHHHHHHHc-CCCccEEEECCC
Confidence            479999999999999999988899999999987653210      00001110   11133333322 247999999987


Q ss_pred             c
Q 019049          231 G  231 (347)
Q Consensus       231 ~  231 (347)
                      .
T Consensus        72 ~   72 (255)
T 2dkn_A           72 V   72 (255)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.86  E-value=0.0085  Score=54.02  Aligned_cols=86  Identities=17%  Similarity=0.168  Sum_probs=53.2

Q ss_pred             cCCCCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEecChhh---------------H-HHHHhcCCcEE-EeCCCCC
Q 019049          145 AQLSSGQVLLVLGAAGGVGVA--AVQIGKVCGATIIAVARGAEK---------------I-KFLKSLGVDHV-VDLSNES  205 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~--~~~la~~~g~~V~~~~~~~~~---------------~-~~~~~~g~~~v-~~~~~~~  205 (347)
                      .....++++||+|+++++|.+  .+..+...|++|++++++..+               . +.+++.|.... +..+-.+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            445778999999999999998  666555669999998875321               1 23345564322 2222111


Q ss_pred             chhhHHHHHHHh--cCCcccEEEeCCCc
Q 019049          206 VIPSVKEFLKAR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       206 ~~~~~~~~~~~~--~~~~~d~v~d~~g~  231 (347)
                       .+.++++.+..  ..+++|++++++|.
T Consensus       135 -~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 -NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             -HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             -HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence             12233333322  23579999999875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.86  E-value=0.0097  Score=55.01  Aligned_cols=84  Identities=18%  Similarity=0.243  Sum_probs=55.5

Q ss_pred             CCC--CEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChh---h----HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          148 SSG--QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE---K----IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       148 ~~~--~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~---~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      +++  +++||+|++|++|..+++.+...|+ +|+.+.++..   +    .+.+++.|....+..-+..-.+++..+.+..
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            445  8999999999999999998888999 7888887632   1    2334456754333222222223355555543


Q ss_pred             c-CCcccEEEeCCCc
Q 019049          218 K-LKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~-~~~~d~v~d~~g~  231 (347)
                      . ..++|++|+++|.
T Consensus       315 ~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          315 PEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCeEEEECCcc
Confidence            2 2478999999884

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.85  E-value=0.005  Score=54.16  Aligned_cols=95  Identities=20%  Similarity=0.169  Sum_probs=61.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHH---HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKFL---KSLGVDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ..+|||.||+|.+|..+++.+...|.+|++++++.    ++.+.+   ...++..+ ..+-.+    .+.+.+.....++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~-~~Dl~d----~~~l~~~~~~~~~   84 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIV-YGLINE----QEAMEKILKEHEI   84 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEE-ECCTTC----HHHHHHHHHHTTC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEE-EeecCC----HHHHHHHHhhCCC
Confidence            35899999999999999999988999999999976    444433   33454432 222222    2233333322379


Q ss_pred             cEEEeCCCcc---chHHHHhccccCC---EEEE
Q 019049          223 DVLYDPVGGK---LTKESLKLLNWGA---QILV  249 (347)
Q Consensus       223 d~v~d~~g~~---~~~~~~~~l~~~G---~~v~  249 (347)
                      |+||.+++..   ....+++.++..|   +++.
T Consensus        85 d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           85 DIVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             CEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            9999999863   2244556655545   5553

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.85  E-value=0.0089  Score=49.00  Aligned_cols=99  Identities=12%  Similarity=0.176  Sum_probs=65.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHh
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .+.+++.+||-.|+  +.|..+..+++.+  +.+|++++.+++..+.+++    .|.. .-+.....+.    .+.....
T Consensus        52 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda----~~~l~~~  125 (221)
T 3dr5_A           52 TNGNGSTGAIAITP--AAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP----LDVMSRL  125 (221)
T ss_dssp             SCCTTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH----HHHGGGS
T ss_pred             hCCCCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH----HHHHHHh
Confidence            33444559998886  6788888999876  6799999999987776643    4533 1122222222    2222222


Q ss_pred             cCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049          218 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  249 (347)
                      ..+.||+||-....    ..+..+.++|+++|.++.
T Consensus       126 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~  161 (221)
T 3dr5_A          126 ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL  161 (221)
T ss_dssp             CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence            24679999865443    246788899999999987

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.85  E-value=0.0026  Score=53.83  Aligned_cols=83  Identities=20%  Similarity=0.301  Sum_probs=52.0

Q ss_pred             CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhH-----HHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--c
Q 019049          149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKI-----KFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~-----~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      .+++++|+|++  +++|..+++.+...|++|++++++.++.     +.+. ..+....+..-+..-.+.++.+.+..  .
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999998  8999999999999999999998775432     2222 23433222111211122233333221  1


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|++++++|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3479999999883

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.85  E-value=0.0032  Score=52.87  Aligned_cols=76  Identities=21%  Similarity=0.189  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.      ...+..+-.+. +.+++..+..  ..+.+|+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~-~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDT-EQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSH-HHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999987654321      12222221111 1233332221  235789999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98873

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.85  E-value=0.0059  Score=56.99  Aligned_cols=85  Identities=14%  Similarity=0.107  Sum_probs=54.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE-ecCh-------------hh----HHHHHhcCCcEEEeCCCCCch
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAV-ARGA-------------EK----IKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~-~~~~-------------~~----~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      +++++++||+|++|++|..+++.+...|++ |+.+ .++.             ++    .+.+++.|....+-.-+..-.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            567899999999999999999988888996 6666 6652             11    233344565433322222222


Q ss_pred             hhHHHHHHHh-cCCcccEEEeCCCc
Q 019049          208 PSVKEFLKAR-KLKGVDVLYDPVGG  231 (347)
Q Consensus       208 ~~~~~~~~~~-~~~~~d~v~d~~g~  231 (347)
                      ++++.+.... ..+.+|.+|+++|.
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcC
Confidence            3355555433 23578999999983

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.84  E-value=0.0056  Score=51.74  Aligned_cols=82  Identities=18%  Similarity=0.144  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .++++||+|+++++|..+++.+...|++|+++. ++.++.+..    ++.+.. .++..+-.+ .+.+.++.+..  ..+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN-REQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999997755 555444332    233322 222222222 12233332211  124


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|++++++|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            78999999883

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.84  E-value=0.0071  Score=51.51  Aligned_cols=69  Identities=17%  Similarity=0.251  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCC---cEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGV---DHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~---~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+. +++.   ..+....+  .            ...+|
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~--l------------~~~aD  189 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ--L------------KQSYD  189 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG--C------------CSCEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH--h------------cCCCC
Confidence            6789999999 9999999999988997 9999999998866553 4442   22222211  1            15799


Q ss_pred             EEEeCCCcc
Q 019049          224 VLYDPVGGK  232 (347)
Q Consensus       224 ~v~d~~g~~  232 (347)
                      +|++|++..
T Consensus       190 iIInaTp~g  198 (281)
T 3o8q_A          190 VIINSTSAS  198 (281)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEcCcCC
Confidence            999999864

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.83  E-value=0.0074  Score=52.16  Aligned_cols=87  Identities=23%  Similarity=0.301  Sum_probs=66.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++..|++|++.+++.++ +.+.+.|+...      +    .+++.     ...|+|+.+
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~------~----l~ell-----~~aDvV~l~  203 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV------D----LETLL-----KESDVVTIH  203 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC------C----HHHHH-----HHCSEEEEC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc------C----HHHHH-----hhCCEEEEe
Confidence            4779999999 999999999999999999999998776 55667786421      2    23333     256999998


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      +..     ..+ ...+..+++++.++.++.
T Consensus       204 ~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          204 VPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             cCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            874     123 467789999999988764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.83  E-value=0.0095  Score=51.42  Aligned_cols=93  Identities=20%  Similarity=0.336  Sum_probs=59.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-----hhhHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-----AEKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-----~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      ..+|+|+||+|.+|..+++.+...|++|++++++     +++.+.++   ..++. ++..+-.+    .+.+.+..  .+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d----~~~l~~~~--~~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDD----HQRLVDAL--KQ   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSC----HHHHHHHH--TT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCC----HHHHHHHH--hC
Confidence            3579999999999999999998899999999997     44444433   23443 22222111    23333333  36


Q ss_pred             ccEEEeCCCcc-------chHHHHhccccCC---EEEE
Q 019049          222 VDVLYDPVGGK-------LTKESLKLLNWGA---QILV  249 (347)
Q Consensus       222 ~d~v~d~~g~~-------~~~~~~~~l~~~G---~~v~  249 (347)
                      +|+||.+++..       ....+++.++..|   +++.
T Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            99999998742       2234555555444   6763

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.82  E-value=0.0073  Score=51.45  Aligned_cols=89  Identities=16%  Similarity=0.154  Sum_probs=63.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|||+|+ |.+|..+++.+...|++|+++++++.+.+.+...+...+. .+-.++    +       ..++|+||.+++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~D~~d~----~-------~~~~d~vi~~a~   72 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLL-WPGEEP----S-------LDGVTHLLISTA   72 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEE-SSSSCC----C-------CTTCCEEEECCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEE-eccccc----c-------cCCCCEEEECCC
Confidence            58999998 9999999999998999999999999888777766654332 222222    1       357899999997


Q ss_pred             cc-----chHHHHhcccc----CCEEEEEee
Q 019049          231 GK-----LTKESLKLLNW----GAQILVIGF  252 (347)
Q Consensus       231 ~~-----~~~~~~~~l~~----~G~~v~~g~  252 (347)
                      ..     ....+++.++.    -.+++.++.
T Consensus        73 ~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           73 PDSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             CBTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             ccccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            42     22444444433    368888774

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.80  E-value=0.012  Score=50.79  Aligned_cols=86  Identities=16%  Similarity=0.146  Sum_probs=62.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|......... +.            -...|+||.|+.
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~-e~------------~~~aDvvi~~vp   73 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAR-EF------------AGVVDALVILVV   73 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSST-TT------------TTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHH-HH------------HhcCCEEEEECC
Confidence            48999999 99999999999999999999999999999988888754222111 11            135788888888


Q ss_pred             cc-chHHH-------HhccccCCEEEEE
Q 019049          231 GK-LTKES-------LKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~-~~~~~-------~~~l~~~G~~v~~  250 (347)
                      .+ .....       ...++++..++.+
T Consensus        74 ~~~~~~~v~~~~~~l~~~l~~g~ivv~~  101 (303)
T 3g0o_A           74 NAAQVRQVLFGEDGVAHLMKPGSAVMVS  101 (303)
T ss_dssp             SHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred             CHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence            63 33333       2455666666554

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.79  E-value=0.0067  Score=53.10  Aligned_cols=78  Identities=18%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH--HHHHhcCC--c-EEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSLGV--D-HVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~--~~~~~~g~--~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      +.+|||+|++|.+|..+++.+...|++|++++++.++.  +.++.++.  . ..+.. +..-.+.+.+..+..   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHM-DLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCC-CTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEEC-CCCCHHHHHHHHHhc---CCCE
Confidence            57899999999999999999888999999999876542  23344321  1 11111 111111233333322   5799


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ||.+++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.79  E-value=0.0013  Score=55.80  Aligned_cols=72  Identities=17%  Similarity=0.047  Sum_probs=49.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++|||+|++|++|..+++.+...|++|+++++++.+..   ..+. ..+..+-.+    .+.+.+...  ++|++|+++
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~-~~~~~Dl~d----~~~~~~~~~--~~D~vi~~A   72 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNE-ECVQCDLAD----ANAVNAMVA--GCDGIVHLG   72 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTE-EEEECCTTC----HHHHHHHHT--TCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCC-EEEEcCCCC----HHHHHHHHc--CCCEEEECC
Confidence            468999999999999999999999999999999875433   1111 222222111    233333332  789999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      |.
T Consensus        73 g~   74 (267)
T 3rft_A           73 GI   74 (267)
T ss_dssp             SC
T ss_pred             CC
Confidence            74

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.79  E-value=0.0057  Score=51.91  Aligned_cols=91  Identities=13%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++++++|+|+ |++|.++++.+...|++|+++.++.++.+.+ ++++....++..+  +. ..      .. +++|++++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~-~~------~~-~~~DivVn  186 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS--MD-EL------EG-HEFDLIIN  186 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC--SG-GG------TT-CCCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEec--HH-Hh------cc-CCCCEEEE
Confidence            5789999999 8999999999999999999999998886554 4554310011111  10 01      11 57999999


Q ss_pred             CCCccchHH----HHhccccCCEEEEE
Q 019049          228 PVGGKLTKE----SLKLLNWGAQILVI  250 (347)
Q Consensus       228 ~~g~~~~~~----~~~~l~~~G~~v~~  250 (347)
                      |++......    -...++++..++.+
T Consensus       187 ~t~~~~~~~~~~i~~~~l~~~~~v~D~  213 (271)
T 1nyt_A          187 ATSSGISGDIPAIPSSLIHPGIYCYDM  213 (271)
T ss_dssp             CCSCGGGTCCCCCCGGGCCTTCEEEES
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence            999643211    12335555555554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.79  E-value=0.00039  Score=57.93  Aligned_cols=99  Identities=17%  Similarity=0.194  Sum_probs=61.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+++|||+|++|++|..+++.+...|+  +|+++++++++.+.....+...+ .|..+.+      .+.+..  .++|++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------~~~~~~--~~~d~v   88 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD------DYASAF--QGHDVG   88 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGG------GGGGGG--SSCSEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHH------HHHHHh--cCCCEE
Confidence            367999999999999999999999999  99999998764332211122211 1222211      111122  378999


Q ss_pred             EeCCCccc---------------hHHHHhcccc--CCEEEEEeecCC
Q 019049          226 YDPVGGKL---------------TKESLKLLNW--GAQILVIGFASG  255 (347)
Q Consensus       226 ~d~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~  255 (347)
                      ++++|...               ...+++.++.  .++++.++....
T Consensus        89 i~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           89 FCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             EECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             EECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            99998521               1223334433  368998876543

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.78  E-value=0.0031  Score=52.21  Aligned_cols=101  Identities=17%  Similarity=0.249  Sum_probs=66.5

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ....++++||-+|+ | .|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+.   .+.+.....
T Consensus        68 ~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~---~~~l~~l~~  142 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV-F-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA---LATLEQLTQ  142 (232)
T ss_dssp             HHHHTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH---HHHHHHHHT
T ss_pred             HHhcCCCEEEEecC-C-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHHh
Confidence            44457789999997 3 788889999886  5699999999987777654    34322122222232   121222221


Q ss_pred             -C--CcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          219 -L--KGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       219 -~--~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                       .  ..||+||-....    ..+..+.++|+++|.++.-
T Consensus       143 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~  181 (232)
T 3cbg_A          143 GKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID  181 (232)
T ss_dssp             SSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence             1  579999854432    3467888999999999874

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.78  E-value=0.0062  Score=51.44  Aligned_cols=98  Identities=18%  Similarity=0.141  Sum_probs=67.9

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ..+||+.......+.....--.|++++|+|++..+|.-+++++...|++|++..+..                   .+  
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~--  195 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------------KN--  195 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------------SC--
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------hh--
Confidence            345655555555553333234789999999955789999999999999999886432                   12  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        +.+..     ..+|++|.++|.+.+ --.++++++..++.+|.+.
T Consensus       196 --L~~~~-----~~ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          196 --LRHHV-----ENADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             --HHHHH-----HHCSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             --HHHHh-----ccCCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence              22222     257999999998654 2235679999999988664

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.75  E-value=0.0053  Score=56.25  Aligned_cols=80  Identities=24%  Similarity=0.395  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--H-HHHHhcCCcE-EEeCCCCCchhhHHHHHHH---hcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--I-KFLKSLGVDH-VVDLSNESVIPSVKEFLKA---RKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~-~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~---~~~~~  221 (347)
                      +++++||+|++|++|..+++.+...|++|++++++...  . +...+.+... ..|..+.+.   ++.+.+.   ..+..
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~---v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDA---VDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTH---HHHHHHHHHHHSTTC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHH---HHHHHHHHHHHcCCC
Confidence            57899999999999999999888899999999886432  2 2223455432 223333333   3333332   12334


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++|+++|.
T Consensus       289 id~lV~nAGv  298 (454)
T 3u0b_A          289 VDILVNNAGI  298 (454)
T ss_dssp             CSEEEECCCC
T ss_pred             ceEEEECCcc
Confidence            9999999884

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.75  E-value=0.003  Score=55.23  Aligned_cols=81  Identities=17%  Similarity=0.068  Sum_probs=49.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcC--C-cEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLG--V-DHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g--~-~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      -+++.+|||+|++|.+|..+++.+...|++|++++++..+  ...++.+.  . ..++..+-.+ .+.+.+..+.   .+
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~---~~   86 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD-ACSVQRAVIK---AQ   86 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC-HHHHHHHHHH---HC
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCC-HHHHHHHHHH---cC
Confidence            4578899999999999999999998899999999987653  12233321  1 1122222111 1123333322   25


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|+||.+++.
T Consensus        87 ~d~Vih~A~~   96 (335)
T 1rpn_A           87 PQEVYNLAAQ   96 (335)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECccc
Confidence            7999999874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.74  E-value=0.01  Score=54.93  Aligned_cols=85  Identities=22%  Similarity=0.288  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhh---H----HHHHhcCCcEEEeCCCCCchhhHHHHHHHh-
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEK---I----KFLKSLGVDHVVDLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~---~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-  217 (347)
                      +.+++++||+|++|++|..+++.+...|+ +|+++.++...   .    +.+++.|....+..-+..-.+.+..+.+.. 
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            56789999999999999999988888899 59999887641   1    233455643222212222222344444433 


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+.+|.||+++|.
T Consensus       303 ~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          303 DDVPLSAVFHAAAT  316 (486)
T ss_dssp             TTSCEEEEEECCCC
T ss_pred             hcCCCcEEEECCcc
Confidence            22468999999884

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.72  E-value=0.00072  Score=57.37  Aligned_cols=76  Identities=30%  Similarity=0.366  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.....    ..|..+.   +....+.+..  ..+++|+++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~---~~~~~~~~~~~~~~g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREA---AYADGLPGAVAAGLGRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSH---HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCH---HHHHHHHHHHHHhcCCCCEEE
Confidence            578999999999999999999999999999999876543211000    1122221   1122222211  124799999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus       100 nnAg~  104 (266)
T 3uxy_A          100 NNAGV  104 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99884

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.71  E-value=0.0049  Score=54.23  Aligned_cols=89  Identities=25%  Similarity=0.253  Sum_probs=67.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..+++.++.+|++|++.++++.+.+.+.+.|+..+     .+    .+++.     ...|+|+.+
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~----l~ell-----~~aDvV~l~  227 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----ED----LNEML-----PKCDVIVIN  227 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SC----HHHHG-----GGCSEEEEC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CC----HHHHH-----hcCCEEEEC
Confidence            5789999999 999999999999999999999988766677777776432     11    23322     357999988


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      ++.     ..+ ...+..|+++..++.++.
T Consensus       228 ~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          228 MPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             SCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            773     123 567889999998888753

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.71  E-value=0.0034  Score=51.63  Aligned_cols=103  Identities=17%  Similarity=0.198  Sum_probs=67.2

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+.   .+......
T Consensus        64 l~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~---~~~~~~~~  138 (229)
T 2avd_A           64 LARLIQAKKALDLGT-F-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA---LETLDELL  138 (229)
T ss_dssp             HHHHTTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHH
T ss_pred             HHHhcCCCEEEEEcC-C-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH---HHHHHHHH
Confidence            344567889999998 4 788888899876  5699999999987777654    34321112222232   11111222


Q ss_pred             cC---CcccEEEeCCCc----cchHHHHhccccCCEEEEEe
Q 019049          218 KL---KGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 ~~---~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ..   ..||+|+.....    ..+..+.++|+++|.++...
T Consensus       139 ~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          139 AAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             HTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            11   579998865443    34678889999999998753

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.70  E-value=0.0069  Score=50.15  Aligned_cols=74  Identities=20%  Similarity=0.170  Sum_probs=48.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d~v~d~  228 (347)
                      ++++||+|++|++|..+++.+...|++|++++++.+ .   .+.   ..+..+-.+. +.+.+..+.. ..+++|+++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---~~~---~~~~~D~~~~-~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---EDL---IYVEGDVTRE-EDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---SSS---EEEECCTTCH-HHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---cce---EEEeCCCCCH-HHHHHHHHHHHhhCCceEEEEc
Confidence            578999999999999999999889999999998764 1   111   2222221111 1233332211 12478999998


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      +|.
T Consensus        74 ag~   76 (242)
T 1uay_A           74 AGV   76 (242)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            873

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.70  E-value=0.016  Score=48.41  Aligned_cols=99  Identities=19%  Similarity=0.135  Sum_probs=68.3

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~  214 (347)
                      .....+.++.+||-+|+ | .|..+..+++..|++|++++.+++..+.+++    .|..   .+...+-.+.        
T Consensus        29 ~~~~~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~--------   98 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGS-G-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY--------   98 (256)
T ss_dssp             HHHTCCCTTCEEEEETC-T-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC--------
T ss_pred             HHhcCCCCCCEEEEECC-C-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC--------
Confidence            35667889999999998 3 3888888998889999999999987766643    3421   2222222111        


Q ss_pred             HHhcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEee
Q 019049          215 KARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (347)
                        .....||+|+....     +  ..+..+.+.|+|+|+++....
T Consensus        99 --~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  141 (256)
T 1nkv_A           99 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP  141 (256)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred             --CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence              01357999985322     1  246778899999999998653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.70  E-value=0.0029  Score=60.38  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---------ChhhHHH----HHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---------GAEKIKF----LKSLGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---------~~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++++         +.++.+.    +++.+...+.|..+..-   .+++.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~---~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVID---GAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGG---HHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHH---HHHHHH
Confidence            5789999999999999999999999999999876         4443332    34456555666555432   333332


Q ss_pred             Hh--cCCcccEEEeCCCc
Q 019049          216 AR--KLKGVDVLYDPVGG  231 (347)
Q Consensus       216 ~~--~~~~~d~v~d~~g~  231 (347)
                      ..  ..+.+|++++++|.
T Consensus        95 ~~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ----------CEECCCCC
T ss_pred             HHHHHCCCCcEEEECCCC
Confidence            21  12478999999984

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.69  E-value=0.004  Score=55.20  Aligned_cols=89  Identities=19%  Similarity=0.227  Sum_probs=67.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|.|+|. |.+|..+++.++.+|++ |++.+++..+.+.+.+.|+..+     .+    .+++.     ...|+|+.
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell-----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----EN----IEELV-----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SS----HHHHH-----HTCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CC----HHHHH-----hcCCEEEE
Confidence            5789999999 99999999999999997 9999988766666777775421     11    33333     25799999


Q ss_pred             CCCc-----cch-HHHHhccccCCEEEEEee
Q 019049          228 PVGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       228 ~~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      ++..     ..+ ...+..|++++.++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            8875     233 457789999988888764

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.67  E-value=0.0071  Score=52.89  Aligned_cols=87  Identities=17%  Similarity=0.200  Sum_probs=66.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++.+|++|++.+++..+ +.+.+.|+...      +    .+++.     ...|+|+.+
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~------~----l~ell-----~~aDvV~l~  226 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQL------P----LEEIW-----PLCDFITVH  226 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEEC------C----HHHHG-----GGCSEEEEC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceeC------C----HHHHH-----hcCCEEEEe
Confidence            5789999999 999999999999999999999987665 45667786421      2    22222     367999998


Q ss_pred             CCcc-----ch-HHHHhccccCCEEEEEee
Q 019049          229 VGGK-----LT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~~-----~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      ++..     .+ ...+..|++++.++.++.
T Consensus       227 ~P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          227 TPLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            8742     23 467899999999988765

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.66  E-value=0.0095  Score=50.12  Aligned_cols=98  Identities=18%  Similarity=0.206  Sum_probs=67.3

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCcEEEeCCCCC
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNES  205 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~  205 (347)
                      ..+||+...+...+.+...--.|++++|.|++..+|..+++++...  |++|++..+..                   .+
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------------~~  196 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------------RD  196 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------------SC
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------------hH
Confidence            3456555555555544322237889999999556899999999999  89999875432                   12


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                          +.+..     ..+|++|.++|.+.+ ---++++++..++++|.+.
T Consensus       197 ----L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          197 ----LPALT-----RQADIVVAAVGVAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             ----HHHHH-----TTCSEEEECSCCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             ----HHHHH-----hhCCEEEECCCCCcc-cCHHHcCCCcEEEEccCCC
Confidence                22222     468999999998755 3335679988888887654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.65  E-value=0.013  Score=51.64  Aligned_cols=97  Identities=12%  Similarity=0.212  Sum_probs=61.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH--HHHHhc-CCcEEEeCC-CCCchhhHHHHHHHhcCCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSL-GVDHVVDLS-NESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~--~~~~~~-g~~~v~~~~-~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      +.+|+|+|++|.+|..+++.+...|++|++++++.++.  +.+... +. .++..+ -.+    .+.+.+..  .++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v-~~v~~D~l~d----~~~l~~~~--~~~d~V   77 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV-TLFQGPLLNN----VPLMDTLF--EGAHLA   77 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTE-EEEESCCTTC----HHHHHHHH--TTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCc-EEEECCccCC----HHHHHHHH--hcCCEE
Confidence            56899999999999999988888899999999887654  333332 32 222222 111    22333333  368999


Q ss_pred             EeCCCcc------chHHHHhccccC---CEEEEEeec
Q 019049          226 YDPVGGK------LTKESLKLLNWG---AQILVIGFA  253 (347)
Q Consensus       226 ~d~~g~~------~~~~~~~~l~~~---G~~v~~g~~  253 (347)
                      |.+++..      ....+++.++..   ++++.++..
T Consensus        78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            9776542      113344444433   589988754

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.65  E-value=0.022  Score=46.62  Aligned_cols=100  Identities=16%  Similarity=0.171  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC------CEEEEEecChhhHHHHHh----cC-----C--cEEEeCCCCCchh
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCG------ATIIAVARGAEKIKFLKS----LG-----V--DHVVDLSNESVIP  208 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g------~~V~~~~~~~~~~~~~~~----~g-----~--~~v~~~~~~~~~~  208 (347)
                      .++++++||-+|+ |. |..+..+++..+      .+|++++.+++..+.+++    .+     .  ..+...+....  
T Consensus        77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV--  152 (227)
T ss_dssp             TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC--
T ss_pred             hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc--
Confidence            6789999999998 44 888888888876      599999999987777754    23     1  12222211111  


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEee
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~  252 (347)
                       .....  .....||+|+..... ..+..+.++|+++|+++..-.
T Consensus       153 -~~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          153 -NEEEK--KELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             -CHHHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             -ccccC--ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence             10000  112579999877664 456888999999999987643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.65  E-value=0.012  Score=50.38  Aligned_cols=75  Identities=19%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhH--HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKI--KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .++|||+|++|.+|..+++.+...| ++|+++++++++.  +.+...|+..+ ..+-.+    .+.+....  .++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~-~~D~~d----~~~l~~~~--~~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVV-QGDQDD----QVIMELAL--NGAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEE-ECCTTC----HHHHHHHH--TTCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEE-EecCCC----HHHHHHHH--hcCCEEE
Confidence            4689999999999999998888888 8999999987653  23344555432 222112    23333333  3689999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      .+++.
T Consensus        78 ~~a~~   82 (299)
T 2wm3_A           78 IVTNY   82 (299)
T ss_dssp             ECCCH
T ss_pred             EeCCC
Confidence            99873

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.64  E-value=0.0097  Score=51.20  Aligned_cols=92  Identities=23%  Similarity=0.305  Sum_probs=59.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-------hhHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-------EKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-------~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      +.+|+|.||+|.+|..+++.+...|++|++++++.       ++.+.++   ..|+.. +..+-.+    .+.+.+..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d----~~~l~~~~--   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVIL-LEGDIND----HETLVKAI--   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEE-EECCTTC----HHHHHHHH--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEE-EEeCCCC----HHHHHHHH--
Confidence            35799999999999999998888899999999986       5444333   345433 2222112    23333333  


Q ss_pred             CcccEEEeCCCcc---chHHHHhccccC---CEEE
Q 019049          220 KGVDVLYDPVGGK---LTKESLKLLNWG---AQIL  248 (347)
Q Consensus       220 ~~~d~v~d~~g~~---~~~~~~~~l~~~---G~~v  248 (347)
                      .++|+||.+++..   ....+++.++..   ++++
T Consensus        75 ~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             TTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             hCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            3699999999853   223445554433   4665

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.64  E-value=0.0079  Score=48.09  Aligned_cols=102  Identities=16%  Similarity=0.167  Sum_probs=66.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...++++++||-.|+ | .|..+..+++..+  .+|++++.+++..+.+++    .|...-+.....++.    .... .
T Consensus        17 ~~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~~~-~   89 (197)
T 3eey_A           17 KMFVKEGDTVVDATC-G-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQ----NMDK-Y   89 (197)
T ss_dssp             HHHCCTTCEEEESCC-T-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGG----GGGG-T
T ss_pred             HhcCCCCCEEEEcCC-C-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH----HHhh-h
Confidence            456788999999998 4 3788888888864  599999999987777654    333111111112211    0111 1


Q ss_pred             cCCcccEEEeCCCc----------------cchHHHHhccccCCEEEEEee
Q 019049          218 KLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ....||+|+...+-                ..+..+.+.|+++|+++....
T Consensus        90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            23579999865432                346778899999999988753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.63  E-value=0.011  Score=50.29  Aligned_cols=85  Identities=13%  Similarity=0.067  Sum_probs=59.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.+.+.|...... .  +.    .+    .  ...|+|+.|+..
T Consensus         2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~-~--~~----~~----~--~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-Q--DL----SL----L--QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-S--CG----GG----G--TTCSEEEECSCH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCcccc-C--CH----HH----h--CCCCEEEEECCH
Confidence            6899998 99999999999889999999999999888888777531111 1  11    00    1  367999999987


Q ss_pred             cchH----HHHhccccCCEEEEE
Q 019049          232 KLTK----ESLKLLNWGAQILVI  250 (347)
Q Consensus       232 ~~~~----~~~~~l~~~G~~v~~  250 (347)
                      ....    .+...++++..++.+
T Consensus        68 ~~~~~~~~~l~~~~~~~~~vv~~   90 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPTAIVTDV   90 (279)
T ss_dssp             HHHHHHHHHHGGGSCTTCEEEEC
T ss_pred             HHHHHHHHHHHhhCCCCCEEEEC
Confidence            5433    333455566666554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.63  E-value=0.012  Score=55.96  Aligned_cols=81  Identities=22%  Similarity=0.202  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHH----HHHhcCCcEEEeCCCCCc-hhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------EKIK----FLKSLGVDHVVDLSNESV-IPSVKEFL  214 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~---------~~~~----~~~~~g~~~v~~~~~~~~-~~~~~~~~  214 (347)
                      .+++++|+|+++++|.+.++.+...|++|++++++.         ++.+    .+++.|...+.|..+..- ...++++.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999987653         3332    233445555566655433 12233333


Q ss_pred             HHhcCCcccEEEeCCCc
Q 019049          215 KARKLKGVDVLYDPVGG  231 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~  231 (347)
                      +..  +.+|++++++|-
T Consensus        87 ~~~--G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNF--GTVHVIINNAGI  101 (604)
T ss_dssp             HHH--SCCCEEEECCCC
T ss_pred             HHc--CCCCEEEECCCC
Confidence            333  579999999983

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.63  E-value=0.016  Score=48.62  Aligned_cols=125  Identities=20%  Similarity=0.216  Sum_probs=72.8

Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  192 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~  192 (347)
                      ...+.+++++.+....-- .. ......+...  +.++++||-.|+ |. |..++.+++ .|++|++++.++...+.+++
T Consensus        88 ~~~~~l~p~~~fgtg~~~-tt-~~~~~~l~~~--~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~  160 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHE-TT-RLALKALARH--LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEA  160 (254)
T ss_dssp             SEEEECCCC-----CCSH-HH-HHHHHHHHHH--CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHH
T ss_pred             ceEEEECCCccccCCCCH-HH-HHHHHHHHHh--cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHH
Confidence            445667777655443211 11 1112223222  678999999998 44 777776666 57799999999987777754


Q ss_pred             ----cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEEeec
Q 019049          193 ----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       193 ----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                          .+..  +.....+.    ...   .....||+|+.....    ..+..+.+.|+++|++++.+..
T Consensus       161 n~~~~~~~--v~~~~~d~----~~~---~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          161 NAKRNGVR--PRFLEGSL----EAA---LPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             HHHHTTCC--CEEEESCH----HHH---GGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHHcCCc--EEEEECCh----hhc---CcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence                3432  11112222    111   223579999965432    3456778899999999987543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.63  E-value=0.0077  Score=48.52  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=50.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ++++|.|++|++|..+++.+...  +|+++++++++.+.+. +++. ..+..+-.+ .+.+....+.  .+++|++++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~--~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLAD-ELEAKALLEE--AGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTS-HHHHHHHHHH--HCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCC-HHHHHHHHHh--cCCCCEEEECC
Confidence            37999999999999988877666  9999999988766554 3333 332222111 2223444433  34799999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      |.
T Consensus        75 g~   76 (207)
T 2yut_A           75 GK   76 (207)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.62  E-value=0.0059  Score=54.26  Aligned_cols=76  Identities=13%  Similarity=0.039  Sum_probs=50.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +.+|||+||+|.+|..+++.+... |++|++++++.++...+.. .+.. ++..+-.+-   .+.+.+..  .++|+||.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~-~~~~Dl~~d---~~~~~~~~--~~~d~Vih   97 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMH-FFEGDITIN---KEWVEYHV--KKCDVILP   97 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEE-EEECCTTTC---HHHHHHHH--HHCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeE-EEeCccCCC---HHHHHHHh--ccCCEEEE
Confidence            569999999999999999888877 8999999998776544433 2332 222221101   22222222  27899999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      +++.
T Consensus        98 ~A~~  101 (372)
T 3slg_A           98 LVAI  101 (372)
T ss_dssp             CBCC
T ss_pred             cCcc
Confidence            8874

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.61  E-value=0.014  Score=49.83  Aligned_cols=102  Identities=14%  Similarity=0.158  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +....++.++.+||-+|+ | .|..+..+++..|++|++++.+++..+.+++.    |...-+.....++.+        
T Consensus        56 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--------  125 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGC-G-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ--------  125 (287)
T ss_dssp             HHTTTTCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG--------
T ss_pred             HHHHcCCCCcCEEEEECC-c-ccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh--------
Confidence            335567889999999998 3 48888888877899999999999887777542    321111111112210        


Q ss_pred             hcCCcccEEEeC-----CCc----cchHHHHhccccCCEEEEEeec
Q 019049          217 RKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       217 ~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      .. ..||+|+..     .+.    ..+..+.+.|+|+|++++....
T Consensus       126 ~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  170 (287)
T 1kpg_A          126 FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT  170 (287)
T ss_dssp             CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            11 579999864     221    3457788999999999986543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.59  E-value=0.0012  Score=55.13  Aligned_cols=76  Identities=17%  Similarity=0.157  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .++++||+|+++++|...++.+.. .|++|++++++++ +.+      ....+..+-.+ .+.++++.+.....++|+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~------~~~~~~~Dv~~-~~~v~~~~~~~~~~~id~lv   75 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE------NLKFIKADLTK-QQDITNVLDIIKNVSFDGIF   75 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT------TEEEEECCTTC-HHHHHHHHHHTTTCCEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc------cceEEecCcCC-HHHHHHHHHHHHhCCCCEEE
Confidence            467899999999999999877766 7889999887654 111      11222222111 22345555555556899999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        76 ~nAg~   80 (244)
T 4e4y_A           76 LNAGI   80 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99984

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.58  E-value=0.014  Score=47.99  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=67.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHh
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .....+.++++||-+|+ |. |..+..+++. +.+|++++.+++..+.+++.    +...++..+....         ..
T Consensus        63 ~~~~~~~~~~~vLdiG~-G~-G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~---------~~  130 (231)
T 1vbf_A           63 LDELDLHKGQKVLEIGT-GI-GYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG---------YE  130 (231)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC---------CG
T ss_pred             HHhcCCCCCCEEEEEcC-CC-CHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc---------cc
Confidence            35567889999999998 43 7777777776 48999999999988887653    2112222211110         01


Q ss_pred             cCCcccEEEeCCCcc-chHHHHhccccCCEEEEEe
Q 019049          218 KLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  251 (347)
                      ....||+|+....-. ....+.+.|+++|+++..-
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence            135799998766543 3467889999999998874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.57  E-value=0.012  Score=48.28  Aligned_cols=95  Identities=16%  Similarity=0.164  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC-------CEEEEEecChhhHHHHHhc----C-------CcEEEeCCCCCch
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCG-------ATIIAVARGAEKIKFLKSL----G-------VDHVVDLSNESVI  207 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g-------~~V~~~~~~~~~~~~~~~~----g-------~~~v~~~~~~~~~  207 (347)
                      .++++++||-+|+ |. |..+..+++..+       .+|++++.+++..+.+++.    +       ...+...+.... 
T Consensus        81 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-  157 (227)
T 1r18_A           81 HLKPGARILDVGS-GS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-  157 (227)
T ss_dssp             TCCTTCEEEEESC-TT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-
T ss_pred             hCCCCCEEEEECC-Cc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC-
Confidence            5788999999998 44 888888888776       4999999999877766532    1       112222111110 


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEe
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  251 (347)
                              ......||+|+.+..- .....+.+.|+++|+++..-
T Consensus       158 --------~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          158 --------YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             --------CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --------CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence                    0112579999977765 44588899999999998753

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.57  E-value=0.0028  Score=52.63  Aligned_cols=97  Identities=14%  Similarity=0.120  Sum_probs=65.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcC----CcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG----VDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ..+|.+||-+|.  |.|..+..+++..+.++++++.+++-.+.+++..    ....+.  ..+    ...+........|
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~--~~~----a~~~~~~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPL--KGL----WEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEE--ESC----HHHHGGGSCTTCE
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEE--eeh----HHhhcccccccCC
Confidence            368899999998  4678888888877789999999999888887533    111111  111    2333333445679


Q ss_pred             cEE-EeCCCc-----------cchHHHHhccccCCEEEEEe
Q 019049          223 DVL-YDPVGG-----------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       223 d~v-~d~~g~-----------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      |.| +|+...           ..+.++.+.|+|+|+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            887 565432           12456789999999998764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.56  E-value=0.0059  Score=53.47  Aligned_cols=73  Identities=22%  Similarity=0.231  Sum_probs=48.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|||+|++|.+|..+++.+...|++|++++++..+.+.+...+... +..+-.+    .+.+.+..  .++|+||.+++.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~Dl~d----~~~~~~~~--~~~d~vih~a~~   87 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPEC-RVAEMLD----HAGLERAL--RGLDGVIFSAGY   87 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEE-EECCTTC----HHHHHHHT--TTCSEEEEC---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEE-EEecCCC----HHHHHHHH--cCCCEEEECCcc
Confidence            7999999999999999999889999999999876544333334332 2222111    23333333  369999999873

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.56  E-value=0.018  Score=49.05  Aligned_cols=93  Identities=14%  Similarity=0.186  Sum_probs=59.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-HhcCC----cEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGV----DHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~-~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      -.+++++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+ ++++.    ..+......+    ..+..     ..
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~----l~~~l-----~~  194 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG----IEDVI-----AA  194 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT----HHHHH-----HH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH----HHHHH-----hc
Confidence            36789999999 9999999999999999 799999999887654 33321    1111111112    22222     25


Q ss_pred             ccEEEeCCCccch-----HHHHhccccCCEEEEE
Q 019049          222 VDVLYDPVGGKLT-----KESLKLLNWGAQILVI  250 (347)
Q Consensus       222 ~d~v~d~~g~~~~-----~~~~~~l~~~G~~v~~  250 (347)
                      +|+|++|++....     ..-.+.++++..++++
T Consensus       195 ~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dl  228 (283)
T 3jyo_A          195 ADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDV  228 (283)
T ss_dssp             SSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEEC
T ss_pred             CCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEe
Confidence            7999999874221     1123556666555543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.56  E-value=0.0046  Score=54.59  Aligned_cols=79  Identities=14%  Similarity=0.053  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc--C-CcEEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--G-VDHVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~--g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .+.+|||+|++|.+|..+++.+...|++|++++++..+...+. .+  + ...++..+-.+. +.+....+..   ++|+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~---~~d~   83 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ-NKLLESIREF---QPEI   83 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH-HHHHHHHHHH---CCSE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCH-HHHHHHHHhc---CCCE
Confidence            3578999999999999999999889999999998765433222 11  1 112222221111 1233333222   5899


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      ||.+++.
T Consensus        84 vih~A~~   90 (357)
T 1rkx_A           84 VFHMAAQ   90 (357)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999883

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.55  E-value=0.015  Score=50.50  Aligned_cols=92  Identities=15%  Similarity=0.226  Sum_probs=59.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh------hhHHHH---HhcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA------EKIKFL---KSLGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~------~~~~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      ..+|+|.|++|.+|..+++.+...|++|++++++.      ++.+.+   ...++.. +..+-.+    .+.+.+..  .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~-v~~D~~d----~~~l~~a~--~   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI-IEGEMEE----HEKMVSVL--K   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEE-EECCTTC----HHHHHHHH--T
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEE-EEecCCC----HHHHHHHH--c
Confidence            35799999999999999999988999999999875      333333   2345433 2222112    23333333  3


Q ss_pred             cccEEEeCCCcc---chHHHHhccccC---CEEE
Q 019049          221 GVDVLYDPVGGK---LTKESLKLLNWG---AQIL  248 (347)
Q Consensus       221 ~~d~v~d~~g~~---~~~~~~~~l~~~---G~~v  248 (347)
                      ++|+||.+++..   ....+++.++..   ++++
T Consensus        77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           77 QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            599999999853   234455555443   3666

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.54  E-value=0.013  Score=50.70  Aligned_cols=87  Identities=20%  Similarity=0.237  Sum_probs=66.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++..|++|++.+++.++. .+++.|+...      +    .+++..     ..|+|+.+
T Consensus       141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~------~----l~ell~-----~aDvVvl~  203 (313)
T 2ekl_A          141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAV------S----LEELLK-----NSDVISLH  203 (313)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEEC------C----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceec------C----HHHHHh-----hCCEEEEe
Confidence            5789999999 9999999999999999999999987754 4667776421      2    333332     56999998


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      +..     ..+ ...+..+++++.++.++.
T Consensus       204 ~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          204 VTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             ccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            874     123 567789999988888754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.54  E-value=0.0064  Score=52.54  Aligned_cols=91  Identities=15%  Similarity=0.129  Sum_probs=57.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|||+|++|.+|..+++.+...|.+|+++++++.+.+ ++  +... +..+ .. .   +.+.+..  .++|+||.+++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~-~~~D-l~-~---~~~~~~~--~~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEY-RVSD-YT-L---EDLINQL--NDVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEE-EECC-CC-H---HHHHHHT--TTCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEE-EEcc-cc-H---HHHHHhh--cCCCEEEEccc
Confidence            58999999999999999999999999999999855444 33  3332 2211 11 2   2233333  38999999987


Q ss_pred             ccc--------------hHHHHhccccC--CEEEEEee
Q 019049          231 GKL--------------TKESLKLLNWG--AQILVIGF  252 (347)
Q Consensus       231 ~~~--------------~~~~~~~l~~~--G~~v~~g~  252 (347)
                      ...              ...+++.++..  .+++.++.
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            421              12344444443  47888774

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.54  E-value=0.0072  Score=53.96  Aligned_cols=89  Identities=18%  Similarity=0.146  Sum_probs=67.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..+++.++.+|.+|++.+++..+.+..+++|+..+     .+    .+++.     ...|+|+.+
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~----l~ell-----~~aDvV~l~  254 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----AT----REDMY-----PVCDVVTLN  254 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SS----HHHHG-----GGCSEEEEC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CC----HHHHH-----hcCCEEEEe
Confidence            5789999999 999999999999999999999988766666777776431     11    22222     367999988


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      +..     ..+ ...+..|+++..++.++.
T Consensus       255 ~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          255 CPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            773     233 567788999888887763

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.53  E-value=0.0087  Score=48.92  Aligned_cols=104  Identities=14%  Similarity=0.234  Sum_probs=65.8

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .....++.+||-+|+  +.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+..+....... .
T Consensus        53 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~  129 (223)
T 3duw_A           53 LVQIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIEN-E  129 (223)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-T
T ss_pred             HHHhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh-c
Confidence            444567889999997  4688888888887  6799999999987776643    45322111122222111111111 1


Q ss_pred             cCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      ....||+|+-....    ..+..+.+.|+++|.++.-
T Consensus       130 ~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~  166 (223)
T 3duw_A          130 KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD  166 (223)
T ss_dssp             TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence            11469999855443    3467788999999988764

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.51  E-value=0.012  Score=46.54  Aligned_cols=100  Identities=20%  Similarity=0.258  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ....+.++++||-.|+ |. |..+..+++.. .+|++++.+++..+.+++    .+...-+.....+.    ...  ...
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~----~~~--~~~   97 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA----PEA--LCK   97 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH----HHH--HTT
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCH----HHh--ccc
Confidence            4567889999999998 44 88888887766 899999999987777754    34311111111222    111  111


Q ss_pred             CCcccEEEeCCCc----cchHHHHhccccCCEEEEEe
Q 019049          219 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       219 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ...+|+|+.....    ..+..+.+.|+++|.++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           98 IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            2479999976542    34577889999999998753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.51  E-value=0.0062  Score=53.20  Aligned_cols=79  Identities=15%  Similarity=0.131  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+.+|||+|++|.+|..+++.+...|++|++++++..+.. .+..+....++..+-.+. +.+.+..+..   ++|+||.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~-~~~~~~~~~~---~~D~vih   94 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDA-GLLERAFDSF---KPTHVVH   94 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCH-HHHHHHHHHH---CCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCH-HHHHHHHhhc---CCCEEEE
Confidence            4669999999999999999999889999999998654221 111222112222221111 1233333222   7899999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        95 ~A~~   98 (330)
T 2pzm_A           95 SAAA   98 (330)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9884

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.51  E-value=0.018  Score=49.77  Aligned_cols=101  Identities=17%  Similarity=0.155  Sum_probs=69.2

Q ss_pred             HhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHH
Q 019049          143 HRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       143 ~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~  214 (347)
                      .... +.++++||-+|+  |.|..+..+++..|++|++++.+++..+.+++    .|..   .++..+-.+.   .    
T Consensus       110 ~~l~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~----  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT---P----  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C----
T ss_pred             HHhccCCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC---C----
Confidence            3444 788999999998  35888888888879999999999987777654    3422   2222221111   0    


Q ss_pred             HHhcCCcccEEEeCCC------ccchHHHHhccccCCEEEEEeecC
Q 019049          215 KARKLKGVDVLYDPVG------GKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g------~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        ...+.||+|+....      ...+..+.+.|+++|++++.....
T Consensus       181 --~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          181 --FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             --CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             --CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence              12357999986432      135678889999999999876443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.51  E-value=0.023  Score=47.25  Aligned_cols=77  Identities=23%  Similarity=0.278  Sum_probs=55.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|+|.|++|.+|...++.+... +.++++.....+..+.+...+++.++|+...+.   ...........+.++|+.|+|
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a---~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDV---VMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTT---HHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHH---HHHHHHHHHHcCCCEEEcCCC
Confidence            6899999999999999988765 888876664443344333346788888887766   455555544568889998887


Q ss_pred             c
Q 019049          231 G  231 (347)
Q Consensus       231 ~  231 (347)
                      -
T Consensus        79 ~   79 (245)
T 1p9l_A           79 F   79 (245)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.50  E-value=0.016  Score=47.41  Aligned_cols=95  Identities=15%  Similarity=0.152  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCC-------cEEEeCCCCCchhhHHH
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGV-------DHVVDLSNESVIPSVKE  212 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~-------~~v~~~~~~~~~~~~~~  212 (347)
                      .+.++++||-.|+ | .|..+..+++..|  .+|++++.++...+.+++    .|.       ..+...+....      
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~------  145 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG------  145 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC------
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC------
Confidence            4788999999998 4 3888888888776  599999999987777653    221       11222111100      


Q ss_pred             HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEe
Q 019049          213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g  251 (347)
                         ......||+|+....- ..+..+.++|+++|+++..-
T Consensus       146 ---~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          146 ---YAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             ---CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ---cccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence               0113469999876654 45688899999999998863

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.48  E-value=0.0078  Score=52.72  Aligned_cols=75  Identities=17%  Similarity=0.091  Sum_probs=47.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|||+|++|.+|..+++.+... |++|++++++.++.+.+.......++..+-.+..+......     .++|+||.+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV-----KKCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH-----HHCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhc-----cCCCEEEEccc
Confidence            7999999999999999988887 89999999987654332221111222222111111123232     26899999887


Q ss_pred             c
Q 019049          231 G  231 (347)
Q Consensus       231 ~  231 (347)
                      .
T Consensus        77 ~   77 (345)
T 2bll_A           77 I   77 (345)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.48  E-value=0.0049  Score=53.36  Aligned_cols=69  Identities=16%  Similarity=0.121  Sum_probs=39.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +.+|||+|++|.+|..+++.+...|++|++++++..+ .     + ....|..+.+.   +.+..+..   ++|+||.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~-----~-~~~~Dl~d~~~---~~~~~~~~---~~d~vih~A   68 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-P-----K-FEQVNLLDSNA---VHHIIHDF---QPHVIVHCA   68 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHH---CCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-C-----C-eEEecCCCHHH---HHHHHHhh---CCCEEEECC
Confidence            4689999999999999999998899999999976543 1     1 11223333221   22222221   589999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      +.
T Consensus        69 ~~   70 (315)
T 2ydy_A           69 AE   70 (315)
T ss_dssp             --
T ss_pred             cc
Confidence            74

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.47  E-value=0.02  Score=48.58  Aligned_cols=85  Identities=22%  Similarity=0.225  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.++.+|.+.+.+ ++   ...         .+++.+   - .+|+|+
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~---------~~~l~~---l-~~DivI  183 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VIS---------YDELSN---L-KGDVII  183 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEE---------HHHHTT---C-CCSEEE
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---ccc---------HHHHHh---c-cCCEEE
Confidence            5889999999 9999999999999999 89999999887765532 21   111         222221   2 789999


Q ss_pred             eCCCccch------HHHHhccccCCEEEEE
Q 019049          227 DPVGGKLT------KESLKLLNWGAQILVI  250 (347)
Q Consensus       227 d~~g~~~~------~~~~~~l~~~G~~v~~  250 (347)
                      +|++....      ..-.+.++++..++++
T Consensus       184 naTp~Gm~~~~~~~pi~~~~l~~~~~v~Dl  213 (282)
T 3fbt_A          184 NCTPKGMYPKEGESPVDKEVVAKFSSAVDL  213 (282)
T ss_dssp             ECSSTTSTTSTTCCSSCHHHHTTCSEEEES
T ss_pred             ECCccCccCCCccCCCCHHHcCCCCEEEEE
Confidence            99864211      1234556777666554

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.47  E-value=0.014  Score=49.84  Aligned_cols=84  Identities=15%  Similarity=0.258  Sum_probs=58.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|.|+|++|.+|...+..+...|.+|++.++++++.+.+.+.|....   +..+.            -...|+||.|+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~---~~~~~------------~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT---DGDGW------------IDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC---CSSGG------------GGTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC---CHHHH------------hcCCCEEEEcCC
Confidence            389999999999999999999999999999999988888877774321   11111            135788888888


Q ss_pred             ccchHHHH----hccccCCEEEE
Q 019049          231 GKLTKESL----KLLNWGAQILV  249 (347)
Q Consensus       231 ~~~~~~~~----~~l~~~G~~v~  249 (347)
                      .......+    ..++++..++.
T Consensus        77 ~~~~~~v~~~l~~~l~~~~ivv~   99 (286)
T 3c24_A           77 DNIIEKVAEDIVPRVRPGTIVLI   99 (286)
T ss_dssp             HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred             chHHHHHHHHHHHhCCCCCEEEE
Confidence            64443333    33444555544

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.47  E-value=0.0091  Score=52.84  Aligned_cols=37  Identities=22%  Similarity=0.211  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHH--cCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKV--CGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~--~g~~V~~~~~~~~  185 (347)
                      .+.+|||+||+|.+|..+++.+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467999999999999999988888  8999999998654

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.47  E-value=0.014  Score=44.70  Aligned_cols=93  Identities=13%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHh---cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFLKS---LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .++|+|.|+ |.+|...++.+...|.+|++++++ +++.+.+++   .|.. ++..+..+     ...++..+-.++|++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~-----~~~l~~a~i~~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND-----SSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS-----HHHHHHHTTTTCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCC-----HHHHHHcChhhCCEE
Confidence            467999998 999999999999999999999997 465555542   3443 33322222     123333344689999


Q ss_pred             EeCCCccchH----HHHhccccCCEEEE
Q 019049          226 YDPVGGKLTK----ESLKLLNWGAQILV  249 (347)
Q Consensus       226 ~d~~g~~~~~----~~~~~l~~~G~~v~  249 (347)
                      +-+++++..+    ...+.+.+..+++.
T Consensus        76 i~~~~~d~~n~~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           76 LALSDNDADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             EECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred             EEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence            9999875332    23344444456654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.47  E-value=0.015  Score=51.47  Aligned_cols=36  Identities=22%  Similarity=0.262  Sum_probs=30.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      ++|||+|++|.+|..+++.+...|++|++++++..+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            589999999999999999988899999999987653

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.46  E-value=0.0041  Score=54.45  Aligned_cols=79  Identities=14%  Similarity=0.124  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+.+|||+||+|.+|..+++.+...|++|++++++..+. +.+.++....++..+-.+. +.+.+..+   +..+|+||+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~-~~~~~~~~---~~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADH-ALVNQLIG---DLQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCH-HHHHHHHH---HHCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCH-HHHHHHHh---ccCCcEEEE
Confidence            357899999999999999999988999999999865321 1111111112222221111 11233322   235899999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      +++.
T Consensus        96 ~A~~   99 (333)
T 2q1w_A           96 TAAS   99 (333)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            9884

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.45  E-value=0.0088  Score=52.51  Aligned_cols=69  Identities=26%  Similarity=0.297  Sum_probs=48.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++++|||+||+|.+|..+++.+...|++|++++++..+      .+...+. |..+      ...+.+..  .++|+||.
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d------~~~~~~~~--~~~d~vih   83 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLED------GQALSDAI--MGVSAVLH   83 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTC------HHHHHHHH--TTCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCC------HHHHHHHH--hCCCEEEE
Confidence            56799999999999999999999999999999998764      2333221 2222      22333333  27999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      +++.
T Consensus        84 ~A~~   87 (347)
T 4id9_A           84 LGAF   87 (347)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9874

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.44  E-value=0.014  Score=47.65  Aligned_cols=76  Identities=11%  Similarity=0.106  Sum_probs=56.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|+|.|+ |.+|...++.+...|.+|+++++++++.+.+. ..|.. ++..+..+     ...++..+-.++|+++-+++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~-----~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSH-----KEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTS-----HHHHHHHTCCTTCEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCC-----HHHHHhcCcccCCEEEEecC
Confidence            5899998 99999999999999999999999999888765 46654 33333222     22333444568999999999


Q ss_pred             ccch
Q 019049          231 GKLT  234 (347)
Q Consensus       231 ~~~~  234 (347)
                      ++..
T Consensus        75 ~d~~   78 (218)
T 3l4b_C           75 RDEV   78 (218)
T ss_dssp             CHHH
T ss_pred             CcHH
Confidence            8543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.42  E-value=0.017  Score=50.48  Aligned_cols=87  Identities=16%  Similarity=0.159  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|.+|.|+|. |.+|...++.++..|.+|++.+++.++.+.+.+.|...+      +    ..+..     ...|+|+.+
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~----l~e~l-----~~aDvVi~~  217 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------S----TPELA-----AQSDFIVVA  217 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------C----HHHHH-----HHCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------C----HHHHH-----hhCCEEEEe
Confidence            4679999999 999999999999999999999987766666666664321      1    22332     256999998


Q ss_pred             CCcc-----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGGK-----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~~-----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ++..     .+ ...+..++++..++.++
T Consensus       218 vp~~~~t~~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          218 CSLTPATEGLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             CCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred             CCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8742     23 45677888888777654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.42  E-value=0.012  Score=51.35  Aligned_cols=38  Identities=26%  Similarity=0.225  Sum_probs=32.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      .+++|||+||+|.+|..+++.+...|++|++++++.++
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   41 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN   41 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence            46799999999999999999888899999999887663

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.41  E-value=0.019  Score=50.53  Aligned_cols=87  Identities=20%  Similarity=0.245  Sum_probs=65.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..+++.++.+|++|++.+++. +.+.+.+.|+..+     .+    .+++..     ..|+|+.+
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~-----~~----l~ell~-----~aDiV~l~  222 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVA-----ES----KDALFE-----QSDVLSVH  222 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEEC-----SS----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEe-----CC----HHHHHh-----hCCEEEEe
Confidence            4779999999 9999999999999999999999875 3455667776422     11    333332     46899988


Q ss_pred             CCc-c----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-K----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-~----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.. +    .+ ...+..|+++..++.++
T Consensus       223 ~Plt~~t~~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          223 LRLNDETRSIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence            763 1    22 56789999999999887

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.41  E-value=0.064  Score=47.03  Aligned_cols=89  Identities=15%  Similarity=0.226  Sum_probs=59.7

Q ss_pred             CEEEEecCCchHHHHHHHHHH-H-cCCEEE-EEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGK-V-CGATII-AVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~-~-~g~~V~-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      -+|.|+|+ |.+|...++.++ . .+++++ +.++++++.+.+ +++|...+++    +    .+++   .....+|+|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~----~~~~---l~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----N----YKDM---IDTENIDAIF   76 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----C----HHHH---HTTSCCSEEE
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----C----HHHH---hcCCCCCEEE
Confidence            38999999 999998888776 4 467765 557777776554 5677654442    2    2222   2334799999


Q ss_pred             eCCCcc-chHHHHhccccCCEEEEEee
Q 019049          227 DPVGGK-LTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       227 d~~g~~-~~~~~~~~l~~~G~~v~~g~  252 (347)
                      .|++.. +.+.+..+++.+ +-|++..
T Consensus        77 i~tp~~~h~~~~~~al~~G-~~v~~eK  102 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAG-LNVFCEK  102 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECS
T ss_pred             EeCChHhHHHHHHHHHHCC-CEEEEcC
Confidence            999874 456677777764 5555543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.41  E-value=0.013  Score=51.38  Aligned_cols=78  Identities=15%  Similarity=0.149  Sum_probs=49.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh----------hhHHHHHh-cCC-cEEEeCCCCCchhhHHHHHHHh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----------EKIKFLKS-LGV-DHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~----------~~~~~~~~-~g~-~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      +++|||+|++|.+|..+++.+...|++|++++++.          +..+.+.+ .+. ..++..+-.+. +.+.+..+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~-   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ-GALQRLFKK-   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH-HHHHHHHHH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH-HHHHHHHHh-
Confidence            36899999999999999998888999999998642          22333332 221 12222221111 123333322 


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                        .++|+||.+++.
T Consensus        80 --~~~d~vih~A~~   91 (348)
T 1ek6_A           80 --YSFMAVIHFAGL   91 (348)
T ss_dssp             --CCEEEEEECCSC
T ss_pred             --cCCCEEEECCCC
Confidence              279999999884

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.40  E-value=0.023  Score=48.20  Aligned_cols=100  Identities=16%  Similarity=0.181  Sum_probs=67.6

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----c-CCcEEEeCCCCCchhhHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----L-GVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~-g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      .....+.++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++    . |...+ .....++.+      
T Consensus       103 ~~~~~~~~~~~VLD~G~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~d~~~------  173 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGV-G-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIAD------  173 (275)
T ss_dssp             ---CCCCTTCEEEEECC-T-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTTT------
T ss_pred             HHHcCCCCcCEEEEecC-C-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEECchhc------
Confidence            35567889999999998 3 677888888874  6799999999988877754    2 53211 111112100      


Q ss_pred             HHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          215 KARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                       ......||+|+.....  ..+..+.+.|+++|+++...
T Consensus       174 -~~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          174 -FISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             -cCcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             1123579999976554  46788999999999998864

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.40  E-value=0.009  Score=52.13  Aligned_cols=88  Identities=23%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..+++.++.+|++|++.+++..+.+...++|+...      +    .+++..     ..|+|+.+
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~----l~ell~-----~aDvV~l~  207 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV------A----CSELFA-----SSDFILLA  207 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC------C----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC------C----HHHHHh-----hCCEEEEc
Confidence            4789999999 999999999999999999999998755566666775321      1    333332     46899988


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      +..     ..+ ...+..|+++..++.++.
T Consensus       208 ~P~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          208 LPLNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            773     123 578899999999988764

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.39  E-value=0.025  Score=50.09  Aligned_cols=89  Identities=20%  Similarity=0.217  Sum_probs=61.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc-CCEEEEE-ecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC-GATIIAV-ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      -+|.|+|. |.+|...+..++.. +++++++ ++++++.+.++++|+..   +.  +    .++++.   ...+|+|+.|
T Consensus         6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~~--~----~~~ll~---~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---YE--S----YEAVLA---DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---CS--C----HHHHHH---CTTCCEEEEC
T ss_pred             CcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---eC--C----HHHHhc---CCCCCEEEEc
Confidence            37999999 99999888777766 6787754 66777777777777632   11  2    333332   3578999999


Q ss_pred             CCcc-chHHHHhccccCCEEEEEeec
Q 019049          229 VGGK-LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +... ....+..+++.+ +-|++..+
T Consensus        73 tp~~~h~~~~~~al~aG-khVl~EKP   97 (359)
T 3e18_A           73 TPNDSHKELAISALEAG-KHVVCEKP   97 (359)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred             CCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence            9874 456667777754 55666654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.39  E-value=0.02  Score=49.26  Aligned_cols=92  Identities=23%  Similarity=0.311  Sum_probs=57.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh------hhHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA------EKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~------~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      ..+|+|.|++|.+|..+++.+...|.+|++++++.      ++.+.++   ..|+.. +..+-.+    .+.+.+...  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d----~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI-VHGSIDD----HASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEE-ECCCTTC----HHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEE-EEeccCC----HHHHHHHHc--
Confidence            46799999999999999999988999999999873      3333332   345432 2222111    222333332  


Q ss_pred             cccEEEeCCCcc---chHHHHhccccC---CEEE
Q 019049          221 GVDVLYDPVGGK---LTKESLKLLNWG---AQIL  248 (347)
Q Consensus       221 ~~d~v~d~~g~~---~~~~~~~~l~~~---G~~v  248 (347)
                      ++|+||.+++..   ....+++.++..   ++++
T Consensus        77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           77 NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            589999999853   223444444433   4666

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.39  E-value=0.013  Score=51.96  Aligned_cols=90  Identities=20%  Similarity=0.233  Sum_probs=63.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|+|+|+ |.+|..+++.+.. ..+|++.+++.++.+.+++......+|..+      .+.+.+..  .++|+|++|++.
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d------~~~l~~~~--~~~DvVi~~~p~   87 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASN------FDKLVEVM--KEFELVIGALPG   87 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTC------HHHHHHHH--TTCSEEEECCCG
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCC------HHHHHHHH--hCCCEEEEecCC
Confidence            7999999 9999999888754 578999999998888776654333333332      23333433  368999999987


Q ss_pred             cc-hHHHHhccccCCEEEEEe
Q 019049          232 KL-TKESLKLLNWGAQILVIG  251 (347)
Q Consensus       232 ~~-~~~~~~~l~~~G~~v~~g  251 (347)
                      .. ...+-.+++.+-.++.+.
T Consensus        88 ~~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           88 FLGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             GGHHHHHHHHHHHTCEEEECC
T ss_pred             cccchHHHHHHhcCcceEeee
Confidence            43 344556777777888764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=96.38  E-value=0.0063  Score=53.24  Aligned_cols=36  Identities=14%  Similarity=0.114  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecCh
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ++++++|+|+++  ++|.++++.+...|++|+++++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            367899999864  999999999999999999887654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.38  E-value=0.019  Score=50.23  Aligned_cols=77  Identities=19%  Similarity=0.239  Sum_probs=47.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh--h---hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--E---KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~--~---~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+|||+||+|.+|..+++.+...|++|++++++.  .   ..+.+...+...++..+-.+. +.+.++.+.   ..+|+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~-~~~~~~~~~---~~~d~v   77 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK-NDVTRLITK---YMPDSC   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHH---HCCSEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCH-HHHHHHHhc---cCCCEE
Confidence            3799999999999999999988999999998632  1   122233333222232221111 123333322   258999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      |.+++.
T Consensus        78 ih~A~~   83 (347)
T 1orr_A           78 FHLAGQ   83 (347)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.37  E-value=0.011  Score=51.39  Aligned_cols=101  Identities=22%  Similarity=0.327  Sum_probs=68.1

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      .....++++++||-+|+ |. |..+..+++..+  .+|++++.+++..+.+++    .|...+ .....+..+..     
T Consensus        68 ~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d~~~~~-----  139 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGDGYYGV-----  139 (317)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGGCC-----
T ss_pred             HHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECChhhcc-----
Confidence            35667889999999998 44 888888887653  479999999998877754    343321 11112221100     


Q ss_pred             HhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEEe
Q 019049          216 ARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIG  251 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g  251 (347)
                       .....||+|+....-.. ...+.+.|+++|+++..-
T Consensus       140 -~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          140 -PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             -GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             -ccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence             01257999997766543 367889999999998763

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.36  E-value=0.019  Score=50.65  Aligned_cols=90  Identities=17%  Similarity=0.204  Sum_probs=63.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ..+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|+...     .+    ..+.....  ...|+||-|+
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~-----~s----~~e~~~~a--~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGA-----RS----IEEFCAKL--VKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCC-----SS----HHHHHHHS--CSSCEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEe-----CC----HHHHHhcC--CCCCEEEEeC
Confidence            468999998 999999999999999999999999999888887775321     11    23333322  2458888888


Q ss_pred             Cccch----HHHHhccccCCEEEEEe
Q 019049          230 GGKLT----KESLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~~~~----~~~~~~l~~~G~~v~~g  251 (347)
                      .....    ..+...++++..++.++
T Consensus        90 p~~~v~~vl~~l~~~l~~g~iiId~s  115 (358)
T 4e21_A           90 PAAVVDSMLQRMTPLLAANDIVIDGG  115 (358)
T ss_dssp             CGGGHHHHHHHHGGGCCTTCEEEECS
T ss_pred             CHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence            86533    33445566666666543

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.33  E-value=0.023  Score=47.40  Aligned_cols=105  Identities=18%  Similarity=0.273  Sum_probs=65.8

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .....++++||-+|+  +.|..+..+++.+  +.+|++++.+++..+.+++    .|...-+.....+..+........-
T Consensus        74 l~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~  151 (247)
T 1sui_A           74 LLKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDE  151 (247)
T ss_dssp             HHHHTTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSG
T ss_pred             HHHhhCcCEEEEeCC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhcc
Confidence            344557789999987  5688888888876  6799999999987776653    4542111222222211111111000


Q ss_pred             -cCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 -KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 -~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                       ....||+||-....    ..+..+.++|+++|.++.-
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence             13579999854432    3457788999999999864

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.31  E-value=0.018  Score=50.04  Aligned_cols=88  Identities=17%  Similarity=0.118  Sum_probs=65.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|.|+|. |.+|...++.++..|++|++.++ +.++ ..+.++|+..+     .+    .+++.     ...|+|+.
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~-----~~----l~ell-----~~aDvVil  208 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFH-----DS----LDSLL-----SVSQFFSL  208 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEEC-----SS----HHHHH-----HHCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEc-----CC----HHHHH-----hhCCEEEE
Confidence            5779999999 99999999999999999999998 7765 35566776321     11    23333     25699999


Q ss_pred             CCCc-----cch-HHHHhccccCCEEEEEee
Q 019049          228 PVGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       228 ~~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      ++..     ..+ ...+..+++++.++.++.
T Consensus       209 ~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          209 NAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             eccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            8874     123 457789999988888764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.31  E-value=0.00099  Score=56.62  Aligned_cols=89  Identities=16%  Similarity=0.165  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.+. . ...     .    .+...+.  -..+|+||+
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~-~~~-----~----~~~~~~~--~~~aDiVIn  181 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-I-NKI-----N----LSHAESH--LDEFDIIIN  181 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-C-EEE-----C----HHHHHHT--GGGCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-c-ccc-----c----HhhHHHH--hcCCCEEEE
Confidence            5789999999 9999999999999999 899999998875543221 1 111     1    2222222  246899999


Q ss_pred             CCCccchHH-----HHhccccCCEEEEEe
Q 019049          228 PVGGKLTKE-----SLKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~~~~~~-----~~~~l~~~G~~v~~g  251 (347)
                      |++......     -.+.++++..++++.
T Consensus       182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~v  210 (277)
T 3don_A          182 TTPAGMNGNTDSVISLNRLASHTLVSDIV  210 (277)
T ss_dssp             CCC-------CCSSCCTTCCSSCEEEESC
T ss_pred             CccCCCCCCCcCCCCHHHcCCCCEEEEec
Confidence            987532211     235567776666653

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.30  E-value=0.035  Score=48.56  Aligned_cols=100  Identities=14%  Similarity=0.125  Sum_probs=66.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHhc----C-------------CcEEEeCCC
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKSL----G-------------VDHVVDLSN  203 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~~----g-------------~~~v~~~~~  203 (347)
                      ....+.++++||-.|+ |. |..+..+++..|  .+|++++.++...+.+++.    |             -..+...+-
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4567889999999998 44 888888888776  6899999999877777542    1             112222222


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                      .+.   ...    .....||+|+-....  ..+..+.++|+++|+++...
T Consensus       177 ~~~---~~~----~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~  219 (336)
T 2b25_A          177 SGA---TED----IKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  219 (336)
T ss_dssp             TCC---C-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             HHc---ccc----cCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            111   100    112469999865554  35688999999999999764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.28  E-value=0.0079  Score=52.15  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=48.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+-.+|||+||+|.+|..+++.+...|++|++++++..+ +.   ++.. ++..+-.+ .+.+.+..+   +.++|+||.
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~-~~~~Dl~d-~~~~~~~~~---~~~~d~vih   80 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVE-MISLDIMD-SQRVKKVIS---DIKPDYIFH   80 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEE-EEECCTTC-HHHHHHHHH---HHCCSEEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceee-EEECCCCC-HHHHHHHHH---hcCCCEEEE
Confidence            355799999999999999999998899999999988664 21   2322 22221111 111333332   235899999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      +++.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            9884

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.28  E-value=0.0086  Score=49.01  Aligned_cols=102  Identities=21%  Similarity=0.247  Sum_probs=65.7

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .....++++||-.|+  +.|..+..+++.+  +.+|++++.+++..+.+++    .|...-+.....+.   .+......
T Consensus        59 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~  133 (225)
T 3tr6_A           59 LVKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA---KDTLAELI  133 (225)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHH
T ss_pred             HHHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH---HHHHHHhh
Confidence            344557889999997  3588888888876  5799999999987776654    34321111112222   11111221


Q ss_pred             cC---CcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 KL---KGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~---~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      ..   ..||+|+-....    ..+..+.++|+++|.++.-
T Consensus       134 ~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  173 (225)
T 3tr6_A          134 HAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD  173 (225)
T ss_dssp             TTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            11   579999854443    2457788999999999864

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.28  E-value=0.017  Score=49.04  Aligned_cols=88  Identities=26%  Similarity=0.283  Sum_probs=60.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .+.+|+|+|+ |++|.+++..+...|++|++.+++.++.+.+. ++|.. +.  .  +.    .+.     -..+|+|+.
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~--~--~~----~~~-----~~~aDiVi~  192 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VV--N--SP----EEV-----IDKVQVIVN  192 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-EC--S--CG----GGT-----GGGCSEEEE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-ee--h--hH----Hhh-----hcCCCEEEE
Confidence            4679999998 99999999999989999999999988766554 45532 11  1  11    000     136899999


Q ss_pred             CCCccchH----HH-HhccccCCEEEEEe
Q 019049          228 PVGGKLTK----ES-LKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~~~~~----~~-~~~l~~~G~~v~~g  251 (347)
                      |++.....    .. ...++++..++.+.
T Consensus       193 atp~~~~~~~~~~i~~~~l~~g~~viDv~  221 (275)
T 2hk9_A          193 TTSVGLKDEDPEIFNYDLIKKDHVVVDII  221 (275)
T ss_dssp             CSSTTSSTTCCCSSCGGGCCTTSEEEESS
T ss_pred             eCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            99864321    11 35677777666654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.27  E-value=0.032  Score=49.05  Aligned_cols=77  Identities=14%  Similarity=0.158  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHH-hc-----CCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLK-SL-----GVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~----~~~~~~-~~-----g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+.+|||+|++|.+|..+++.+...|++|++++++..    +.+.+. .+     ....++..+-.+    .+.+.+...
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~~~~  101 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN----LDDCNNACA  101 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS----HHHHHHHHT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC----HHHHHHHhc
Confidence            3568999999999999999999889999999998643    233222 11     111222222111    222333332


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                        ++|+||.+++.
T Consensus       102 --~~d~vih~A~~  112 (352)
T 1sb8_A          102 --GVDYVLHQAAL  112 (352)
T ss_dssp             --TCSEEEECCSC
T ss_pred             --CCCEEEECCcc
Confidence              79999999884

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.26  E-value=0.083  Score=46.61  Aligned_cols=108  Identities=17%  Similarity=0.193  Sum_probs=69.4

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecC----hhh---------HHHHHhcCCcEE
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG----AEK---------IKFLKSLGVDHV  198 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~----~~~---------~~~~~~~g~~~v  198 (347)
                      .+...++++.....--++.+|+|.|+ |..|..+++++...|+ +|++++++    .+|         ..++++.+.   
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---  250 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---  250 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---
Confidence            34444445533332225679999999 9999999999999999 89999987    544         334443321   


Q ss_pred             EeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEeecC
Q 019049          199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~  254 (347)
                       .....+    +.+.+     .++|++|-+++...+ ++.++.|+++..+..+..+.
T Consensus       251 -~~~~~~----L~eav-----~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          251 -ERLSGD----LETAL-----EGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             -TCCCSC----HHHHH-----TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             -cCchhh----HHHHH-----ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence             011122    23332     357999999885444 67888898877655554443

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.24  E-value=0.026  Score=47.12  Aligned_cols=99  Identities=14%  Similarity=0.130  Sum_probs=68.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC---cEEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....+.++.+||-+|+ | .|..+..+++..+.+|++++.++...+.+++    .|.   ..++..+-.++   .     
T Consensus        40 ~l~~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~-----  109 (257)
T 3f4k_A           40 FINELTDDAKIADIGC-G-TGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL---P-----  109 (257)
T ss_dssp             TSCCCCTTCEEEEETC-T-TSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---S-----
T ss_pred             HHhcCCCCCeEEEeCC-C-CCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC---C-----
Confidence            3446788999999998 3 5888889999887899999999987776643    342   12222222221   0     


Q ss_pred             HhcCCcccEEEeCCCc------cchHHHHhccccCCEEEEEee
Q 019049          216 ARKLKGVDVLYDPVGG------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                       .....||+|+....-      ..+..+.+.|+|+|++++...
T Consensus       110 -~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          110 -FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             -SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             -CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence             123579999754321      346778899999999998763

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.23  E-value=0.015  Score=50.08  Aligned_cols=121  Identities=21%  Similarity=0.119  Sum_probs=70.9

Q ss_pred             ccCcchHHHHHHHHHHh--------cC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCc-
Q 019049          128 AALPVAFGTSHVALVHR--------AQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD-  196 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~--------~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~-  196 (347)
                      ..+||+...+...+.+.        .+ --.|++++|+|++..+|..+++++...|++|+++.++..+. +...+++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            45666666666555442        22 23688999999944679999999999999999988764321 112222211 


Q ss_pred             EEE-eCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          197 HVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       197 ~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +.. .....+    ...+.+.+  ..+|+||.++|.+.+----++++++-.++++|.+.
T Consensus       226 ~~~t~~~~t~----~~~L~e~l--~~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          226 HHVEDLGEYS----EDLLKKCS--LDSDVVITGVPSENYKFPTEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CEEEEEEECC----HHHHHHHH--HHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             cccccccccc----HhHHHHHh--ccCCEEEECCCCCcceeCHHHcCCCeEEEEcCCCc
Confidence            000 000000    01222222  36899999999864312224578887777776553

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.22  E-value=0.019  Score=50.61  Aligned_cols=85  Identities=19%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      |++|.|+|. |.+|..+++.++.+|.+|++.+++. +.+.+.+.|+...      +    .+++.     ...|+|+.++
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~~------~----l~ell-----~~aDvV~l~~  238 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENGVEPA------S----LEDVL-----TKSDFIFVVA  238 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTTCEEC------C----HHHHH-----HSCSEEEECS
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcCeeeC------C----HHHHH-----hcCCEEEEcC
Confidence            789999999 9999999999999999999999875 3455566775421      2    33333     2568998877


Q ss_pred             Cc-----cch-HHHHhccccCCEEEEEe
Q 019049          230 GG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ..     ..+ ...+..|++++.++.++
T Consensus       239 Plt~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          239 AVTSENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             CSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred             cCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence            63     123 56788999999998876

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.21  E-value=0.026  Score=47.60  Aligned_cols=102  Identities=14%  Similarity=0.262  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC---cEEEeCCCCCchhhHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEF  213 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~  213 (347)
                      +.....+.++.+||-+|+ | .|..+..+++..+++|++++.+++..+.+++    .|.   ..+...+-.+.   .   
T Consensus        53 l~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~---  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGC-G-IGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL---P---  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEESC-T-TSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C---
T ss_pred             HHHhcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC---C---
Confidence            345677889999999998 3 4788888888889999999999987776654    232   12222221111   0   


Q ss_pred             HHHhcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEeec
Q 019049          214 LKARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                         .....||+|+....     .  ..+..+.+.|+++|++++....
T Consensus       125 ---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~  168 (273)
T 3bus_A          125 ---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV  168 (273)
T ss_dssp             ---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred             ---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence               12357999985322     1  3467788999999999887543

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.21  E-value=0.028  Score=44.25  Aligned_cols=98  Identities=10%  Similarity=0.166  Sum_probs=64.7

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...+.++++||=.|+  |.|..+..+++. +.+|++++.+++..+.+++    .|..  .++.   .+.    ..+... 
T Consensus        17 ~~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~---~~~----~~l~~~-   85 (185)
T 3mti_A           17 AEVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL---DGH----ENLDHY-   85 (185)
T ss_dssp             HTTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE---SCG----GGGGGT-
T ss_pred             HHhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CcH----HHHHhh-
Confidence            456788999999998  348888888887 8899999999987776643    3432  2222   111    111111 


Q ss_pred             cCCcccEEEeCCCc----------------cchHHHHhccccCCEEEEEee
Q 019049          218 KLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ....||+|+-..+.                ..+..+.+.|+|+|+++.+..
T Consensus        86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            24579999765321                124677899999999988643

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.20  E-value=0.035  Score=49.08  Aligned_cols=85  Identities=20%  Similarity=0.160  Sum_probs=54.0

Q ss_pred             CCCCCEEEEecCCchHHHHHH-HHHHHcCCEEEEEecChhh----------------HHHHHhcCCc-EEEeCCCCCchh
Q 019049          147 LSSGQVLLVLGAAGGVGVAAV-QIGKVCGATIIAVARGAEK----------------IKFLKSLGVD-HVVDLSNESVIP  208 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~-~la~~~g~~V~~~~~~~~~----------------~~~~~~~g~~-~v~~~~~~~~~~  208 (347)
                      ...++++||+|+++++|++.. .+|...|+.++++....+.                .+.+++.|.. ..++.+-.+ .+
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d-~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS-DE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS-HH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC-HH
Confidence            346789999999999999865 5555789999888765431                1344556643 334433322 22


Q ss_pred             hHHHHHHHh--cCCcccEEEeCCCcc
Q 019049          209 SVKEFLKAR--KLKGVDVLYDPVGGK  232 (347)
Q Consensus       209 ~~~~~~~~~--~~~~~d~v~d~~g~~  232 (347)
                      ..+++.+..  ..+++|+++.+.+.+
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccc
Confidence            233333322  356899999998853

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.19  E-value=0.03  Score=51.33  Aligned_cols=94  Identities=14%  Similarity=0.151  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+++|+|+|+ |++|..++..+... |.+|++++++.++.+.+.+ .+.. .+..+-.+.    +.+.+..  .++|+|+
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~-~~~~D~~d~----~~l~~~l--~~~DvVI   93 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSK-AISLDVTDD----SALDKVL--ADNDVVI   93 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCE-EEECCTTCH----HHHHHHH--HTSSEEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCc-EEEEecCCH----HHHHHHH--cCCCEEE
Confidence            3568999998 99999999888877 6799999999888776654 3432 222221121    1222222  2689999


Q ss_pred             eCCCccch-HHHHhccccCCEEEEE
Q 019049          227 DPVGGKLT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       227 d~~g~~~~-~~~~~~l~~~G~~v~~  250 (347)
                      +|++.... .....+++.+-.++..
T Consensus        94 n~tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           94 SLIPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             ECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             ECCchhhhHHHHHHHHhcCCEEEEe
Confidence            99996432 2233556666666553

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=96.17  E-value=0.022  Score=49.79  Aligned_cols=85  Identities=21%  Similarity=0.254  Sum_probs=59.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++..|.+|++.+++.++ +.+.+.|+..    .  +    ..+..     ...|+|+.+
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~--~----l~e~l-----~~aDiVil~  207 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARY----M--D----IDELL-----EKSDIVILA  207 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEE----C--C----HHHHH-----HHCSEEEEC
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee----c--C----HHHHH-----hhCCEEEEc
Confidence            4779999999 999999999999999999999998775 5555566421    1  1    22222     246888887


Q ss_pred             CCcc-----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGGK-----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~~-----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +...     .+ ...+..++++ .++.++
T Consensus       208 vp~~~~t~~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          208 LPLTRDTYHIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             CCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred             CCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence            7652     23 3456777777 665554

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.17  E-value=0.038  Score=47.16  Aligned_cols=90  Identities=20%  Similarity=0.222  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc---E---EEeCCCCCchhhHHHHHHHhcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD---H---VVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~---~---v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      .+++++|+|+ |++|.+++..+...| +|+++.++.++.+.+. +++..   .   .++..+  +         ....+.
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~--~---------~~~~~~  193 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--L---------DVDLDG  193 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC--T---------TCCCTT
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee--H---------HHhhCC
Confidence            5789999999 799999999999999 9999999887765543 33210   0   011111  0         001257


Q ss_pred             ccEEEeCCCccchH------H-HHhccccCCEEEEEe
Q 019049          222 VDVLYDPVGGKLTK------E-SLKLLNWGAQILVIG  251 (347)
Q Consensus       222 ~d~v~d~~g~~~~~------~-~~~~l~~~G~~v~~g  251 (347)
                      +|++++|+|.....      . ..+.++++..++.+.
T Consensus       194 ~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          194 VDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             CCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            89999999864321      1 235667777777664

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.15  E-value=0.021  Score=47.24  Aligned_cols=105  Identities=14%  Similarity=0.189  Sum_probs=65.8

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .....++++||-+|+  +.|..+..+++.+  +.+|++++.+++..+.+++    .|...-+.....+..+.........
T Consensus        65 l~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~  142 (237)
T 3c3y_A           65 VLKLVNAKKTIEVGV--FTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHHTTCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHST
T ss_pred             HHHhhCCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcc
Confidence            344557789999987  4677888888876  5799999999987776653    4543212222222211111111100


Q ss_pred             -cCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 -KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 -~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                       ....||+||-....    ..++.+.++|+++|.++.-
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence             13579999855443    2457788999999998864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.15  E-value=0.035  Score=54.55  Aligned_cols=85  Identities=14%  Similarity=0.228  Sum_probs=56.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHH-HcCC-EEEEEecChh---h----HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGK-VCGA-TIIAVARGAE---K----IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~-~~g~-~V~~~~~~~~---~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      +.+++++||.|++|++|..+++.+. ..|+ +|+.++++..   +    .+.+++.|....+..-+..-.+++++..+..
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999998886 7999 5888888732   2    2333456754333222322233355555543


Q ss_pred             c-CCcccEEEeCCCc
Q 019049          218 K-LKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~-~~~~d~v~d~~g~  231 (347)
                      . ...+|++++++|.
T Consensus       607 ~~~~~id~lVnnAGv  621 (795)
T 3slk_A          607 PDEHPLTAVVHAAGV  621 (795)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCEEEEECCCc
Confidence            2 2378999999884

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.14  E-value=0.024  Score=49.05  Aligned_cols=91  Identities=21%  Similarity=0.242  Sum_probs=59.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHH---HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFL---KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      ++|||.|++|.+|..+++.+...|++|++++++.. +.+.+   ...|+.. +..+-.+    .+.+.+..  .++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~-v~~Dl~d----~~~l~~a~--~~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAII-VKGELDE----HEKLVELM--KKVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEE-EECCTTC----HHHHHHHH--TTCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEE-EEecCCC----HHHHHHHH--cCCCEEE
Confidence            47999999999999999999889999999999874 43333   3445443 2222112    23333333  3699999


Q ss_pred             eCCCcc---chHHHHhccccC---CEEE
Q 019049          227 DPVGGK---LTKESLKLLNWG---AQIL  248 (347)
Q Consensus       227 d~~g~~---~~~~~~~~l~~~---G~~v  248 (347)
                      .+++..   ....+++.++..   ++++
T Consensus        85 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           85 SALAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             ECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             ECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            999852   234455555443   3665

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=96.14  E-value=0.026  Score=48.88  Aligned_cols=35  Identities=26%  Similarity=0.266  Sum_probs=31.6

Q ss_pred             CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecC
Q 019049          149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .++++||+|+  ++++|..+++.+...|++|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            5789999999  8999999999999999999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=96.13  E-value=0.011  Score=52.62  Aligned_cols=75  Identities=16%  Similarity=0.136  Sum_probs=49.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ..+|||+|++|.+|..+++.+...|++|++++++..+.......+.. ++..+-.+    .+.+.+..  .++|+||.++
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~-~~~~Dl~d----~~~~~~~~--~~~d~Vih~A  101 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDE-FHLVDLRV----MENCLKVT--EGVDHVFNLA  101 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSE-EEECCTTS----HHHHHHHH--TTCSEEEECC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCce-EEECCCCC----HHHHHHHh--CCCCEEEECc
Confidence            46899999999999999999988999999999876543222122332 22222111    22233333  3799999998


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      +.
T Consensus       102 ~~  103 (379)
T 2c5a_A          102 AD  103 (379)
T ss_dssp             CC
T ss_pred             ee
Confidence            73

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.13  E-value=0.033  Score=48.71  Aligned_cols=86  Identities=22%  Similarity=0.339  Sum_probs=64.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+.+|.|+|. |.+|...++.++..|.+|++.+++.++ +.+.++|+..    .  +    ..+..     ...|+|+.+
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~--~----l~~~l-----~~aDvVil~  211 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF----K--P----LEDLL-----RESDFVVLA  211 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE----C--C----HHHHH-----HHCSEEEEC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc----C--C----HHHHH-----hhCCEEEEC
Confidence            4679999999 999999999999999999999998876 5556666521    1  2    23332     256999998


Q ss_pred             CCcc-----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGGK-----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~~-----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ++..     .+ ...+..++++..++.++
T Consensus       212 vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          212 VPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8752     23 45678889988887765

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.12  E-value=0.022  Score=50.17  Aligned_cols=88  Identities=20%  Similarity=0.276  Sum_probs=64.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~-~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|++|.|+|. |.+|...++.++ ..|.+|++.+++.++.+.+.++|+..+     .+    ..++..     ..|+|+.
T Consensus       162 ~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell~-----~aDvVil  226 (348)
T 2w2k_A          162 RGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DS----LEELAR-----RSDCVSV  226 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SS----HHHHHH-----HCSEEEE
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CC----HHHHhc-----cCCEEEE
Confidence            5789999999 999999999999 999999999988776666666675421     12    233322     4699998


Q ss_pred             CCCc-c----ch-HHHHhccccCCEEEEEe
Q 019049          228 PVGG-K----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       228 ~~g~-~----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ++.. +    .+ ...+..++++..++.++
T Consensus       227 ~vp~~~~t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          227 SVPYMKLTHHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             CCCCSGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred             eCCCChHHHHHhhHHHHhcCCCCCEEEECC
Confidence            8874 1    22 45677888888777654

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.12  E-value=0.043  Score=44.34  Aligned_cols=98  Identities=12%  Similarity=0.040  Sum_probs=67.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCc
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      ...+.++.+||-+|+ | .|..+..+++. |++|++++.+++..+.+++.+...  ++..+-.++          .....
T Consensus        41 l~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~----------~~~~~  107 (218)
T 3ou2_A           41 LRAGNIRGDVLELAS-G-TGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW----------TPDRQ  107 (218)
T ss_dssp             HTTTTSCSEEEEESC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC----------CCSSC
T ss_pred             HhcCCCCCeEEEECC-C-CCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC----------CCCCc
Confidence            344778889999998 3 37777777776 889999999999888888765221  222221111          23467


Q ss_pred             ccEEEeCCCc---------cchHHHHhccccCCEEEEEeecC
Q 019049          222 VDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       222 ~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      ||+|+....-         ..+..+.+.|+++|.++......
T Consensus       108 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  149 (218)
T 3ou2_A          108 WDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD  149 (218)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred             eeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence            9999865431         23467789999999999876443

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=96.10  E-value=0.04  Score=48.16  Aligned_cols=86  Identities=22%  Similarity=0.285  Sum_probs=61.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE----------EEeCCCCCchhhHHHHHHHhcC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH----------VVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~----------v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      ..+|.|+|+ |.+|.+.+..+...|.+|++.++++++.+.+++.|...          ..+    +.    .      .-
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~----~------~~   78 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATN----DL----E------EI   78 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEES----CG----G------GC
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeC----CH----H------Hh
Confidence            348999999 99999999888888999999999998888887665311          111    11    0      01


Q ss_pred             CcccEEEeCCCccchHHHHhcccc-CCEEEEE
Q 019049          220 KGVDVLYDPVGGKLTKESLKLLNW-GAQILVI  250 (347)
Q Consensus       220 ~~~d~v~d~~g~~~~~~~~~~l~~-~G~~v~~  250 (347)
                      ...|+||-|+.+..+..++..+++ +..++.+
T Consensus        79 ~~aDvVil~vk~~~~~~v~~~l~~~~~~vv~~  110 (335)
T 1z82_A           79 KKEDILVIAIPVQYIREHLLRLPVKPSMVLNL  110 (335)
T ss_dssp             CTTEEEEECSCGGGHHHHHTTCSSCCSEEEEC
T ss_pred             cCCCEEEEECCHHHHHHHHHHhCcCCCEEEEE
Confidence            467999999988777777766653 4445544

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.10  E-value=0.024  Score=48.63  Aligned_cols=84  Identities=18%  Similarity=0.192  Sum_probs=60.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.+.+.|...   ..  +    ..+..     ..+|+|+.|++.
T Consensus         7 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~---~~--~----~~~~~-----~~~D~vi~~v~~   71 (299)
T 1vpd_A            7 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET---AS--T----AKAIA-----EQCDVIITMLPN   71 (299)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE---CS--S----HHHHH-----HHCSEEEECCSS
T ss_pred             eEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee---cC--C----HHHHH-----hCCCEEEEECCC
Confidence            7999998 99999999988888999999999999888887776432   11  1    22222     247999999985


Q ss_pred             -cchHHHH-------hccccCCEEEEE
Q 019049          232 -KLTKESL-------KLLNWGAQILVI  250 (347)
Q Consensus       232 -~~~~~~~-------~~l~~~G~~v~~  250 (347)
                       ..+...+       ..++++..++.+
T Consensus        72 ~~~~~~~~~~~~~l~~~l~~~~~vv~~   98 (299)
T 1vpd_A           72 SPHVKEVALGENGIIEGAKPGTVLIDM   98 (299)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred             HHHHHHHHhCcchHhhcCCCCCEEEEC
Confidence             3344333       456677666654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.09  E-value=0.024  Score=53.87  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hh-HHHHHhcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EK-IKFLKSLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~-~~~~~~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~  224 (347)
                      .|++++|+|+++++|.+.++.+...|++|++.++.. ++ .+.+++.|...+....+.  +.....+.+.+..  +++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~--G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY--GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH--SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc--CCCCE
Confidence            468999999999999999999999999999987532 21 233444554433332221  1111123333322  47999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|-
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.08  E-value=0.075  Score=45.82  Aligned_cols=75  Identities=25%  Similarity=0.333  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecC---hhhHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG---AEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~---~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.++   .+|.+.+. ++    +.. ..++..+.+.   ..+..    
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~---~~~~l----  218 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA---FTEAL----  218 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH---HHHHH----
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh---hHhhc----
Confidence            5789999999 9999999999999999 89999999   66555442 22    221 2233222100   11111    


Q ss_pred             CCcccEEEeCCCcc
Q 019049          219 LKGVDVLYDPVGGK  232 (347)
Q Consensus       219 ~~~~d~v~d~~g~~  232 (347)
                       ..+|+||+|++..
T Consensus       219 -~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 -ASADILTNGTKVG  231 (312)
T ss_dssp             -HHCSEEEECSSTT
T ss_pred             -cCceEEEECCcCC
Confidence             2579999998753

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.08  E-value=0.028  Score=47.08  Aligned_cols=99  Identities=16%  Similarity=0.223  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ......++.+||-+|+ | .|..+..+++. +.+|++++.+++..+.+++    .|..  .+...+...+   .      
T Consensus        31 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l---~------   98 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT-G-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM---P------   98 (260)
T ss_dssp             HHHTCCSCCEEEEETC-T-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC---C------
T ss_pred             HHhCCCCCCEEEEEeC-C-CCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC---C------
Confidence            4556778999999998 3 57777777765 4599999999987777654    2321  2222221111   0      


Q ss_pred             hcCCcccEEEeCCCc-------cchHHHHhccccCCEEEEEeec
Q 019049          217 RKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      .....||+|+....-       ..+..+.+.|+|+|+++.....
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~  142 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS  142 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence            123579999876442       3467888999999999987543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.07  E-value=0.031  Score=48.55  Aligned_cols=87  Identities=14%  Similarity=0.219  Sum_probs=61.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      ..+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|+...-     +    ..+..     ...|+||.|+
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~-----~----~~e~~-----~~aDvVi~~v   95 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHE-----Q----ARAAA-----RDADIVVSML   95 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEES-----S----HHHHH-----TTCSEEEECC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeC-----C----HHHHH-----hcCCEEEEEC
Confidence            458999999 9999999999999999999999999998888877753221     1    22221     3568888888


Q ss_pred             Ccc-chHH------HHhccccCCEEEEEe
Q 019049          230 GGK-LTKE------SLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~~-~~~~------~~~~l~~~G~~v~~g  251 (347)
                      ..+ ....      ....++++..++.++
T Consensus        96 p~~~~~~~v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A           96 ENGAVVQDVLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             SSHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence            752 3332      333566666666553

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.06  E-value=0.022  Score=50.05  Aligned_cols=88  Identities=22%  Similarity=0.280  Sum_probs=63.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...++.++..|++|++.+++.++ ...++.|+..+.     +    .+++..     ..|+|+.+
T Consensus       167 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~-----~----l~ell~-----~aDvV~l~  230 (347)
T 1mx3_A          167 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVERALGLQRVS-----T----LQDLLF-----HSDCVTLH  230 (347)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHHHHTCEECS-----S----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhHhhcCCeecC-----C----HHHHHh-----cCCEEEEc
Confidence            5789999999 999999999999999999999887654 234556653211     1    233332     46899888


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEee
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  252 (347)
                      +..     ..+ ...+..|+++..++.++.
T Consensus       231 ~P~t~~t~~li~~~~l~~mk~gailIN~ar  260 (347)
T 1mx3_A          231 CGLNEHNHHLINDFTVKQMRQGAFLVNTAR  260 (347)
T ss_dssp             CCCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             CCCCHHHHHHhHHHHHhcCCCCCEEEECCC
Confidence            764     123 567788999888887653

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.06  E-value=0.021  Score=50.03  Aligned_cols=71  Identities=14%  Similarity=0.126  Sum_probs=52.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|.|+|. |.+|...+..++..|.+|++.++++++.+.+.++|+...-     +    ..+..... ..+.|+||-|+.
T Consensus         9 ~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~-----~----~~e~~~~a-~~~aDlVilavP   77 (341)
T 3ktd_A            9 RPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSA-----D----LEATLQRA-AAEDALIVLAVP   77 (341)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEES-----C----HHHHHHHH-HHTTCEEEECSC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeC-----C----HHHHHHhc-ccCCCEEEEeCC
Confidence            57999998 9999999999999999999999999999988888874321     1    12222111 124688888887


Q ss_pred             cc
Q 019049          231 GK  232 (347)
Q Consensus       231 ~~  232 (347)
                      ..
T Consensus        78 ~~   79 (341)
T 3ktd_A           78 MT   79 (341)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.03  E-value=0.031  Score=45.99  Aligned_cols=99  Identities=19%  Similarity=0.307  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhc----C-CcEEEeCCCCCchhhHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSL----G-VDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~----g-~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      ....++||++||=.|+  +.|..+..+++..|.  +|++++.+++..+.+++.    + ...+. .+.....    .. .
T Consensus        71 ~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~-~d~~~p~----~~-~  142 (233)
T 4df3_A           71 IELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL-GDARFPE----KY-R  142 (233)
T ss_dssp             SCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE-SCTTCGG----GG-T
T ss_pred             hhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE-EeccCcc----cc-c
Confidence            4567899999999998  458888899998875  899999999877766542    1 22222 1211110    00 0


Q ss_pred             HhcCCcccEEEeCCCcc-----chHHHHhccccCCEEEEE
Q 019049          216 ARKLKGVDVLYDPVGGK-----LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~-----~~~~~~~~l~~~G~~v~~  250 (347)
                       .....+|+||.....+     .+.++.+.|+|+|++++.
T Consensus       143 -~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 -HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             -TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence             1134689888655432     356778899999999875

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.03  E-value=0.015  Score=51.26  Aligned_cols=48  Identities=21%  Similarity=0.257  Sum_probs=41.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HHhcCCc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKSLGVD  196 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-~~~~g~~  196 (347)
                      -.|++|+|.|. |.+|..+++.+...|++|++.+++.++.+. ++++|+.
T Consensus       171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence            36899999999 999999999999999999999999887764 4456754

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.03  E-value=0.034  Score=44.70  Aligned_cols=98  Identities=11%  Similarity=0.086  Sum_probs=61.8

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CC-----------------cEEEeCCCC
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GV-----------------DHVVDLSNE  204 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~-----------------~~v~~~~~~  204 (347)
                      ....+.++.+||..|+  |.|..+..+++. |++|++++.+++-.+.+++. +.                 ..++..+-.
T Consensus        16 ~~l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            3445678899999998  346666777765 99999999999988777642 11                 111111111


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCc---------cchHHHHhccccCCEEEEEe
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ++.  ..      ..+.||+|++...-         ..++.+.+.|+|+|+++++.
T Consensus        93 ~l~--~~------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           93 ALT--AR------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             SST--HH------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cCC--cc------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            110  00      01369999974321         13467889999999955443

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.02  E-value=0.043  Score=49.00  Aligned_cols=35  Identities=23%  Similarity=0.201  Sum_probs=31.1

Q ss_pred             CEEEEecCCchHHHHHHHHHH-HcCCEEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~-~~g~~V~~~~~~~~  185 (347)
                      -+|||+|++|.+|..+++.+. ..|++|++++++..
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            379999999999999998888 89999999987654

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.02  E-value=0.034  Score=47.53  Aligned_cols=97  Identities=20%  Similarity=0.090  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC---cEEEeCCCCCchhhHHHHHHHhc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+.++.+||-+|+  |.|..+..+++..|++|++++.++...+.+++    .|.   ..+...+-.+.   .      ..
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~------~~  147 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI---P------CE  147 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC---S------SC
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC---C------CC
Confidence            7889999999998  36888888888889999999999987766653    232   12222221111   0      12


Q ss_pred             CCcccEEEeCCCc-------cchHHHHhccccCCEEEEEeec
Q 019049          219 LKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       219 ~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      ...||+|+....-       ..+..+.+.|+|+|++++....
T Consensus       148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  189 (297)
T 2o57_A          148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  189 (297)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence            3579999865331       3467888999999999987643

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.01  E-value=0.049  Score=44.71  Aligned_cols=100  Identities=17%  Similarity=0.248  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcC---Cc-EEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG---VD-HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ....+.++++||-.|+ |. |..+..+++..| .+|++++.+++..+.+++.-   .. ..+..+....   . ... ..
T Consensus        68 ~~~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~---~-~~~-~~  140 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKP---Q-EYA-NI  140 (230)
T ss_dssp             CCCCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCG---G-GGT-TT
T ss_pred             cccCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCc---c-ccc-cc
Confidence            3455778999999998 44 888888888876 59999999998777665421   11 1111121111   0 000 01


Q ss_pred             cCCcccEEEeCCCcc-----chHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLYDPVGGK-----LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~d~~g~~-----~~~~~~~~l~~~G~~v~~  250 (347)
                       ...||+|+.....+     .+..+.+.|+++|+++..
T Consensus       141 -~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          141 -VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             -SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence             25799999654433     367788999999999886

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.01  E-value=0.053  Score=45.82  Aligned_cols=88  Identities=18%  Similarity=0.211  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      +...+++++|+|+ |++|.+++..+...|+ +|++..++.+|.+.+ ++++..  +..   ..           ....+|
T Consensus       115 ~~~~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~---~~-----------~~~~~D  177 (271)
T 1npy_A          115 HLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YIN---SL-----------ENQQAD  177 (271)
T ss_dssp             TCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EES---CC-----------TTCCCS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cch---hh-----------hcccCC
Confidence            3446789999999 9999999999999998 899999998876554 456642  110   11           014689


Q ss_pred             EEEeCCCccchH--------HHHhccccCCEEEEE
Q 019049          224 VLYDPVGGKLTK--------ESLKLLNWGAQILVI  250 (347)
Q Consensus       224 ~v~d~~g~~~~~--------~~~~~l~~~G~~v~~  250 (347)
                      +|++|++.....        .....++++..++++
T Consensus       178 ivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dl  212 (271)
T 1npy_A          178 ILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDV  212 (271)
T ss_dssp             EEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEEC
T ss_pred             EEEECCCCCccCccccCCCCCCHHHcCCCCEEEEe
Confidence            999999864321        112455666666655

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.01  E-value=0.037  Score=47.27  Aligned_cols=45  Identities=16%  Similarity=0.147  Sum_probs=38.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVD  196 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~  196 (347)
                      .+|.|+|+ |.+|...+..+...  |.+|++.++++++.+.+.+.|..
T Consensus         7 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~   53 (290)
T 3b1f_A            7 KTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIV   53 (290)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSC
T ss_pred             ceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCc
Confidence            48999998 99999988887766  57999999999888888777753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.97  E-value=0.007  Score=51.73  Aligned_cols=36  Identities=19%  Similarity=0.181  Sum_probs=31.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      ++..+|||+|++|.+|..+++.+...|++|++++++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   45 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   45 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence            456799999999999999999998899999999875

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.96  E-value=0.038  Score=47.15  Aligned_cols=85  Identities=20%  Similarity=0.248  Sum_probs=60.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      .+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|+...     .+    ..+..     ...|+||.|+.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~----~~~~~-----~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----AT----PCEVV-----ESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SS----HHHHH-----HHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CC----HHHHH-----hcCCEEEEEcC
Confidence            47999999 999999999999999999999999999888887775321     11    22222     23588888887


Q ss_pred             c-cchHHH-------HhccccCCEEEEE
Q 019049          231 G-KLTKES-------LKLLNWGAQILVI  250 (347)
Q Consensus       231 ~-~~~~~~-------~~~l~~~G~~v~~  250 (347)
                      . ......       ...++++..++.+
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~   94 (287)
T 3pef_A           67 DPAAAEEVCFGKHGVLEGIGEGRGYVDM   94 (287)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred             CHHHHHHHHcCcchHhhcCCCCCEEEeC
Confidence            4 233332       3556666666554

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.96  E-value=0.026  Score=48.77  Aligned_cols=35  Identities=17%  Similarity=0.136  Sum_probs=31.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-Ch
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GA  184 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~  184 (347)
                      |++|||+||+|.+|..+++.+...|++|+++.+ ++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            578999999999999999999889999999887 54

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.95  E-value=0.0032  Score=55.69  Aligned_cols=38  Identities=26%  Similarity=0.398  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEK  186 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~  186 (347)
                      ++.+|||+|++|.+|..+++.+...| ++|++++++..+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~   83 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG   83 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCc
Confidence            34689999999999999999998899 899999987543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.94  E-value=0.0062  Score=49.83  Aligned_cols=75  Identities=12%  Similarity=0.118  Sum_probs=49.9

Q ss_pred             CCCEEEEecC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049          149 SGQVLLVLGA----------------AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  212 (347)
Q Consensus       149 ~~~~VlI~g~----------------~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  212 (347)
                      .|++|||.||                +|++|.+.++.+...|++|+++.++.. .+.  ..|. .+++..+  ..+-.+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~--~~g~-~~~dv~~--~~~~~~~   80 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT--PPFV-KRVDVMT--ALEMEAA   80 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC--CTTE-EEEECCS--HHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc--CCCC-eEEccCc--HHHHHHH
Confidence            5789999999                589999999999999999999876532 110  1122 2344433  2122333


Q ss_pred             HHHHhcCCcccEEEeCCCc
Q 019049          213 FLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g~  231 (347)
                      +.+..  +.+|++++++|-
T Consensus        81 v~~~~--~~~Dili~~Aav   97 (226)
T 1u7z_A           81 VNASV--QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHHG--GGCSEEEECCBC
T ss_pred             HHHhc--CCCCEEEECCcc
Confidence            33333  468999999885

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.94  E-value=0.2  Score=44.03  Aligned_cols=90  Identities=16%  Similarity=0.152  Sum_probs=58.3

Q ss_pred             CEEEEecCCchHHH-HHHHHHHHc-CCEEE-EEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          151 QVLLVLGAAGGVGV-AAVQIGKVC-GATII-AVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       151 ~~VlI~g~~g~~G~-~~~~la~~~-g~~V~-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      -+|.|+|+ |.+|. ..+..++.. +++++ +.++++++.+.+ +++|+..+-     +    .++++   ....+|+|+
T Consensus        28 ~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~-----~----~~~ll---~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVE-----G----YPALL---ERDDVDAVY   94 (350)
T ss_dssp             EEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEE-----S----HHHHH---TCTTCSEEE
T ss_pred             eEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcC-----C----HHHHh---cCCCCCEEE
Confidence            38999999 99998 566666655 77877 446666665544 467765431     2    23332   335789999


Q ss_pred             eCCCcc-chHHHHhccccCCEEEEEeecC
Q 019049          227 DPVGGK-LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       227 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      .|+... ....+..+++.+ +-|++..+.
T Consensus        95 i~tp~~~h~~~~~~al~aG-k~Vl~EKP~  122 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAG-KHVLAEKPL  122 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred             ECCCcHHHHHHHHHHHHCC-CcEEEeCCC
Confidence            999875 445666666654 556676553

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=95.94  E-value=0.032  Score=48.67  Aligned_cols=76  Identities=18%  Similarity=0.222  Sum_probs=46.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHhc-CC-cEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSL-GV-DHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~~~~~-g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      +|||+|++|.+|..+++.+...|++|+++++..    +..+.++++ +. ...+..+-.+ .+.+.+..+.   .++|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~---~~~D~v   77 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC-HHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCC-HHHHHHHhhc---cCCCEE
Confidence            699999999999999999988999999987532    222333322 31 1222222111 1123333332   368999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      |.++|.
T Consensus        78 ih~A~~   83 (338)
T 1udb_A           78 IHFAGL   83 (338)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            999874

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=95.92  E-value=0.022  Score=48.75  Aligned_cols=32  Identities=22%  Similarity=0.245  Sum_probs=29.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +|||+|++|.+|..+++.+. .|++|++++++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~   33 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHS   33 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEecccc
Confidence            69999999999999998888 799999999865

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.91  E-value=0.016  Score=50.40  Aligned_cols=74  Identities=14%  Similarity=0.224  Sum_probs=47.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc--CCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL--GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+|||+|++|.+|..+++.+...|++|++++++..+..  ..+  +.. ++..+-.+. +.+.+..+.   .++|+||.+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~-~~~~D~~~~-~~~~~~~~~---~~~d~vih~   74 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAK-FYNGDLRDK-AFLRDVFTQ---ENIEAVMHF   74 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSE-EEECCTTCH-HHHHHHHHH---SCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcE-EEECCCCCH-HHHHHHHhh---cCCCEEEEC
Confidence            47999999999999999999989999999987654221  112  222 222221111 123333322   479999999


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      ++.
T Consensus        75 a~~   77 (330)
T 2c20_A           75 AAD   77 (330)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            884

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.90  E-value=0.093  Score=45.68  Aligned_cols=88  Identities=17%  Similarity=0.245  Sum_probs=55.4

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEE-EEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          152 VLLVLGAAGGVGVAA-VQIGKVCGATII-AVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~-~~la~~~g~~V~-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +|.|+|+ |.+|... +..+...+.+++ +.++++++.+.+ +++|...++  .  +    .++++   ....+|+|+.|
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~--~----~~~~l---~~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T--S----VEELV---GDPDVDAVYVS   69 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S--C----HHHHH---TCTTCCEEEEC
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C--C----HHHHh---cCCCCCEEEEe
Confidence            6899999 9999876 544444778876 556777766544 456753222  1  1    23332   23468999999


Q ss_pred             CCccc-hHHHHhccccCCEEEEEee
Q 019049          229 VGGKL-TKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       229 ~g~~~-~~~~~~~l~~~G~~v~~g~  252 (347)
                      +.... ...+..+++. |+-|++..
T Consensus        70 tp~~~h~~~~~~al~~-Gk~v~~ek   93 (332)
T 2glx_A           70 TTNELHREQTLAAIRA-GKHVLCEK   93 (332)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEECS
T ss_pred             CChhHhHHHHHHHHHC-CCeEEEeC
Confidence            98754 4556667766 55555643

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.87  E-value=0.077  Score=40.99  Aligned_cols=100  Identities=17%  Similarity=0.077  Sum_probs=61.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ..+.++++||-.|+ |. |..+..+++..  +.++++++.++ ..+.    ....+...+-.+. ...+.+........|
T Consensus        18 ~~~~~~~~vLd~G~-G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~-~~~~~~~~~~~~~~~   89 (180)
T 1ej0_A           18 KLFKPGMTVVDLGA-AP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDE-LVMKALLERVGDSKV   89 (180)
T ss_dssp             CCCCTTCEEEEESC-TT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSH-HHHHHHHHHHTTCCE
T ss_pred             CCCCCCCeEEEeCC-CC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccc-hhhhhhhccCCCCce
Confidence            34788999999998 44 88888888886  47999999876 3221    2112222222221 111222232445689


Q ss_pred             cEEEeCC-----Cc-------------cchHHHHhccccCCEEEEEee
Q 019049          223 DVLYDPV-----GG-------------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       223 d~v~d~~-----g~-------------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      |+|+...     +.             ..+..+.++|+++|.++....
T Consensus        90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9998732     21             234667889999999997643

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.86  E-value=0.019  Score=51.02  Aligned_cols=77  Identities=16%  Similarity=0.072  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .+.+|||+|++|.+|..+++.+...| ++|++++++..+.. .+.......++..+-.+    .+.+.+..  .++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d----~~~l~~~~--~~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITD----DALLASLQ--DEYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTC----HHHHHHCC--SCCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCC----HHHHHHHh--hCCCEEE
Confidence            35689999999999999999998899 99999998765321 11101111122111111    22333333  3799999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      .+++.
T Consensus       105 h~A~~  109 (377)
T 2q1s_A          105 HLATY  109 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99884

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.86  E-value=0.054  Score=49.43  Aligned_cols=93  Identities=13%  Similarity=0.131  Sum_probs=57.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +++|+|+|+ |++|..+++.+...|++|++.+++.++.+.+.+ ++....+..+-.+.    +.+.+..  .++|+|++|
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~----~~l~~~l--~~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD----AALDAEV--AKHDLVISL   75 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCH----HHHHHHH--TTSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCH----HHHHHHH--cCCcEEEEC
Confidence            578999985 999999998888889999999998877665532 33222222222121    2222222  379999999


Q ss_pred             CCccch-HHHHhccccCCEEEE
Q 019049          229 VGGKLT-KESLKLLNWGAQILV  249 (347)
Q Consensus       229 ~g~~~~-~~~~~~l~~~G~~v~  249 (347)
                      ++.... .....+++++-.++.
T Consensus        76 a~~~~~~~i~~a~l~~g~~vvd   97 (450)
T 1ff9_A           76 IPYTFHATVIKSAIRQKKHVVT   97 (450)
T ss_dssp             CC--CHHHHHHHHHHHTCEEEE
T ss_pred             CccccchHHHHHHHhCCCeEEE
Confidence            986332 223344555444443

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=95.86  E-value=0.018  Score=50.22  Aligned_cols=36  Identities=19%  Similarity=0.217  Sum_probs=32.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +++|||+||+|.+|..+++.+...|++|+++.++.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~   44 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPD   44 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcc
Confidence            679999999999999999999889999999888754

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.85  E-value=0.02  Score=48.87  Aligned_cols=41  Identities=20%  Similarity=0.229  Sum_probs=36.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  192 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~  192 (347)
                      ++|.|+|+ |.+|...++.+...|++|++.++++++.+.+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            68999999 999999999999999999999999988776654

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.85  E-value=0.095  Score=42.78  Aligned_cols=98  Identities=19%  Similarity=0.265  Sum_probs=63.6

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC-cEEEeCCCCCchhhHHHHHHHhc
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ...++++++||=.|+ |..|..+..+++..+.+|++++.+++..+.+++    .|. ..++..+...+.        ...
T Consensus        50 ~~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~--------~~~  120 (230)
T 3evz_A           50 KTFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK--------GVV  120 (230)
T ss_dssp             HTTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST--------TTC
T ss_pred             HhhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh--------hcc
Confidence            344678999999998 536777777777668899999999987777653    342 223332211110        012


Q ss_pred             CCcccEEEeCCC--------------------------ccchHHHHhccccCCEEEEE
Q 019049          219 LKGVDVLYDPVG--------------------------GKLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~g--------------------------~~~~~~~~~~l~~~G~~v~~  250 (347)
                      ...||+|+-...                          ...+..+.+.|+++|+++++
T Consensus       121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            357999985421                          12356677889999988875

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.84  E-value=0.047  Score=44.96  Aligned_cols=94  Identities=9%  Similarity=0.119  Sum_probs=63.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ...++|+|.|+ |.+|...++.+...|. |+++++++++.+.++ .|.. ++..+..+     .+.++..+-.++|.++-
T Consensus         7 ~~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~-~i~gd~~~-----~~~l~~a~i~~ad~vi~   77 (234)
T 2aef_A            7 AKSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGAN-FVHGDPTR-----VSDLEKANVRGARAVIV   77 (234)
T ss_dssp             ---CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCE-EEESCTTC-----HHHHHHTTCTTCSEEEE
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCe-EEEcCCCC-----HHHHHhcCcchhcEEEE
Confidence            45678999999 9999999999988898 999999988887777 6644 33333222     23344444568999999


Q ss_pred             CCCccch----HHHHhccccCCEEEEE
Q 019049          228 PVGGKLT----KESLKLLNWGAQILVI  250 (347)
Q Consensus       228 ~~g~~~~----~~~~~~l~~~G~~v~~  250 (347)
                      +++++..    ....+.+.+..+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~~~iia~  104 (234)
T 2aef_A           78 DLESDSETIHCILGIRKIDESVRIIAE  104 (234)
T ss_dssp             CCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             cCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence            9987432    2334455555565543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.84  E-value=0.039  Score=50.85  Aligned_cols=39  Identities=21%  Similarity=0.189  Sum_probs=33.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEecChhh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGAEK  186 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~---g~~V~~~~~~~~~  186 (347)
                      ..+++|||+|++|.+|..+++.+...   |++|++++++++.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            46789999999999999998877777   8999999997654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=95.84  E-value=0.04  Score=58.12  Aligned_cols=83  Identities=22%  Similarity=0.225  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCch-HHHHHHHHHHHcCCEEEEEe-cChhhHHH----H-Hhc---CCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGG-VGVAAVQIGKVCGATIIAVA-RGAEKIKF----L-KSL---GVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~-~G~~~~~la~~~g~~V~~~~-~~~~~~~~----~-~~~---g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .|+++||+|++++ +|..+++.+...|++|++++ ++.++.+.    + +++   |....+..-+..-.+.++.+.+...
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999998 99999999999999999985 54444321    1 233   4332221122222233455554332


Q ss_pred             -----CC-cccEEEeCCCc
Q 019049          219 -----LK-GVDVLYDPVGG  231 (347)
Q Consensus       219 -----~~-~~d~v~d~~g~  231 (347)
                           .+ .+|++++++|.
T Consensus       731 ~~~~~~G~~IDiLVnNAGi  749 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAAI  749 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCCC
T ss_pred             HhhcccCCCCcEEEeCccc
Confidence                 23 69999999883

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.84  E-value=0.014  Score=48.64  Aligned_cols=106  Identities=14%  Similarity=0.195  Sum_probs=63.4

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhH----HHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKI----KFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .....++++||-+|+  +.|..+..+++..  +.+|++++.+++..    +.++..|...-+.....+..+.........
T Consensus        55 l~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~  132 (242)
T 3r3h_A           55 LIRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEG  132 (242)
T ss_dssp             HHHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHH
T ss_pred             HHhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhcc
Confidence            344557789999987  4567777788765  57999999988643    334445542111111222211122111111


Q ss_pred             cCCcccEEEeCCCc----cchHHHHhccccCCEEEEEe
Q 019049          218 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ....||+||-....    ..++.+.+.|+++|.++.-.
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          133 GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence            13579999854443    23577889999999998743

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=95.82  E-value=0.061  Score=48.13  Aligned_cols=37  Identities=19%  Similarity=0.160  Sum_probs=31.3

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ..+.+|||+||+|.+|..++..+...|++|+++++..
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~   45 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLV   45 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecC
Confidence            4678999999999999999998888999999998754

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=95.81  E-value=0.057  Score=45.23  Aligned_cols=84  Identities=19%  Similarity=0.245  Sum_probs=60.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|.|+|+ |.+|...+..+...|.+|.+.++++++.+.+. ++|...   .  .+    ..+..     ...|+|+.|+.
T Consensus         5 ~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~--~~----~~~~~-----~~~D~Vi~~v~   69 (259)
T 2ahr_A            5 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---A--MS----HQDLI-----DQVDLVILGIK   69 (259)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---C--SS----HHHHH-----HTCSEEEECSC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---e--CC----HHHHH-----hcCCEEEEEeC
Confidence            7999998 99999999888888889999999988877665 457432   1  11    22222     25799999998


Q ss_pred             ccchHHHHhccccCCEEEEE
Q 019049          231 GKLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~  250 (347)
                      .......+..++++..++..
T Consensus        70 ~~~~~~v~~~l~~~~~vv~~   89 (259)
T 2ahr_A           70 PQLFETVLKPLHFKQPIISM   89 (259)
T ss_dssp             GGGHHHHHTTSCCCSCEEEC
T ss_pred             cHhHHHHHHHhccCCEEEEe
Confidence            76667777667755544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	347
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	9e-30
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	6e-25
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-20
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	5e-19
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-18
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	4e-18
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-17
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	1e-17
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	5e-17
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	6e-17
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-16
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-16
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-16
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	3e-16
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	1e-14
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-14
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-14
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	2e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	2e-14
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-14
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	9e-14
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	1e-13
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	2e-13
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	3e-13
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-12
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	1e-12
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	5e-12
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	8e-12
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-11
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	4e-11
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	6e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-10
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	5e-10
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-10
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-09
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	3e-09
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	4e-09
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	6e-09
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	7e-09
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	9e-09
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-08
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	1e-08
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-08
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	3e-08
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	1e-07
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-05
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-05
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	3e-05
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-05
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-04
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-04
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-04
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-04
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	8e-04
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	8e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.001
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	0.001
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	0.001
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	0.001
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	0.001
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	0.002
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	0.002
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.002
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.002
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.002
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	0.003
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.003
d1xtoa_	304	d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, P	0.003
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.003
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	0.003
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.004
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	0.004
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	0.004
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	0.004
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	0.004
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	0.004

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score =  110 bits (276), Expect = 9e-30
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 7/183 (3%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQ-VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185
            A + V   T+++ L H  +L+ G+   +  G    VG  A QIGK+     I+V R   
Sbjct: 6   GATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP 65

Query: 186 KIKFLK----SLGVDHVVDLSNESVIPSVKEF--LKARKLKGVDVLYDPVGGKLTKESLK 239
            +  +      LG   V+     +             +      +  + VGGK +    +
Sbjct: 66  NLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIAR 125

Query: 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 299
            LN    +L  G  S +   IP ++ + KN+T  G +      +   +   +L +++ W 
Sbjct: 126 KLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWY 185

Query: 300 AKG 302
            +G
Sbjct: 186 EEG 188

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 97.4 bits (241), Expect = 6e-25
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
           AA   VA+ T+  +L    +LS G+ +L+  A GGVG+AAV I K+ GA I   A    K
Sbjct: 3   AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 62

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 246
            + L  LGV++V D  +        E L+     GVDV+ + + G+  +  +++L  G +
Sbjct: 63  REMLSRLGVEYVGDSRSVDF---ADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGR 119

Query: 247 ILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 306
            + +G             AL K+ +   +        +P      L+ +L   A G + +
Sbjct: 120 FIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV 179

Query: 307 H 307
            
Sbjct: 180 L 180

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 85.0 bits (209), Expect = 2e-20
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 4/160 (2%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
              L     T + A V+ A+L  G V  V G  G      +       + II V    +K
Sbjct: 6   VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 65

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA- 245
               K  G    ++  +      ++E L      GVD  ++ +G      +         
Sbjct: 66  FARAKEFGATECINPQDF--SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW 123

Query: 246 -QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 284
              +V+G A+    +      LV   T  G  +G +K   
Sbjct: 124 GVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVE 163

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 81.2 bits (199), Expect = 5e-19
 Identities = 34/160 (21%), Positives = 53/160 (33%), Gaps = 3/160 (1%)

Query: 126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185
               L     T   A V+ A++  G    V G       A +         IIAV    +
Sbjct: 5   TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD 64

Query: 186 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKLLNWG 244
           K +  K  G    V+ ++ S      + L      GVD   + VG       +L+    G
Sbjct: 65  KFEKAKVFGATDFVNPNDHSEPI--SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG 122

Query: 245 AQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 284
             + V+   +    V    I L+   T  G  +G +K   
Sbjct: 123 WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKD 162

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 3/162 (1%)

Query: 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182
           DL   A    +  T++ A     +  +G+ +++ GA        V    +    +I +A 
Sbjct: 2   DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 61

Query: 183 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLL 241
              ++K  + +G D  ++    SV    K  +     +G D + +  G      E  +LL
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 242 NWGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGSYK 281
             G    V G A     +P       ++KN T  G++     
Sbjct: 122 RRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTS 163

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 78.5 bits (192), Expect = 4e-18
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 6/168 (3%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
              +   F T + + V  A+++ G    V G  G      +       A II V    +K
Sbjct: 6   VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 65

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKLLNWGA 245
               K +G    V+  +      ++E L      GVD  ++ +G   T   +L       
Sbjct: 66  FAKAKEVGATECVNPQDYK--KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAY 123

Query: 246 -QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLED 290
              +++G       +    + L+   T  G  +G +K     P ++ D
Sbjct: 124 GVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVAD 171

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 77.8 bits (190), Expect = 1e-17
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)

Query: 125 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184
           LA   + +   T++  L+    +  G+ +LV  AAG VG    QI K+ G  ++  A   
Sbjct: 5   LALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 64

Query: 185 EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWG 244
           EKI +LK +G D   +      + S++E LK     G D  +D VGG+     L  +   
Sbjct: 65  EKIAYLKQIGFDAAFNYKT---VNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDF 121

Query: 245 AQILVIGFA-----SGEIPVIPANIALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLW 298
            +I + G         ++P  P+  +++ K   + G     +   +  V E +LR+L+ W
Sbjct: 122 GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW---QGDVREKALRDLMKW 178

Query: 299 AAKG 302
             +G
Sbjct: 179 VLEG 182

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 76.5 bits (187), Expect = 1e-17
 Identities = 36/163 (22%), Positives = 61/163 (37%), Gaps = 20/163 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  K      +               +  L     V VRV  +S+NY + L  +  
Sbjct: 4   FQAFVVNKTETEFTAGVQTI---------SMDDLPEGD-VLVRVHYSSVNYKDGLASIPD 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG------FAALGSFAQFIVADQSE 114
            +     PFVPG D +G V +       F+ GD V            G ++++       
Sbjct: 54  GKIVKTYPFVPGIDLAGVVVSSQH--PRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW 111

Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 157
           L P+PKG +   A  + +A     +  + R +L  G+ ++ L 
Sbjct: 112 LVPLPKGLER-IAQEISLAELPQALKRILRGEL-RGRTVVRLA 152

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 75.7 bits (185), Expect = 5e-17
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 6/160 (3%)

Query: 125 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG 183
           L +  +   F T + A V+ A+++ G    V G  GGVG +A+   K  GA  II V   
Sbjct: 3   LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 184 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES--LKLL 241
            +K      LG    ++  +      + E +  +   GVD   +  G   T  +      
Sbjct: 62  KDKFPKAIELGATECLNPKDYD--KPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK 281
                 +V+G AS    +    + L+   ++ G  +G +K
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK 159

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 75.4 bits (184), Expect = 6e-17
 Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 5/178 (2%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
           AAA  +   T +  L    ++   +  L   AAGGVG+ A Q  K  GA +I     A+K
Sbjct: 6   AAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK 65

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 246
            +     G   V++   E ++  +KE       K V V+YD VG    + SL  L     
Sbjct: 66  AQSALKAGAWQVINYREEDLVERLKEITGG---KKVRVVYDSVGRDTWERSLDCLQRRGL 122

Query: 247 ILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 303
           ++  G +SG +  +   I   K +  V       Y I     L ++  EL    A G+
Sbjct: 123 MVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELFSLIASGV 179

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 73.3 bits (179), Expect = 1e-16
 Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 27/157 (17%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A V ++LG P            L   + P P+      V +RV+A  LN+A++L  LG
Sbjct: 1   MKAWVLKRLGGP------------LELVDLPEPEAEEGE-VVLRVEAVGLNFADHLMRLG 47

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVP 119
            Y  +   PF+PG +                 G         G  A+ +   +  L P+P
Sbjct: 48  AYLTRLHPPFIPGMEVV-----------GVVEGRRYAALVPQGGLAERVAVPKGALLPLP 96

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL 156
           +G  ++           +  AL+ R     G+V++ L
Sbjct: 97  EGRPVVGPVFPFAEAEAAFRALLDRGHT--GKVVVRL 131

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 74.2 bits (181), Expect = 2e-16
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 20/183 (10%)

Query: 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182
            L A A L  A  T++  L    Q   G+ + V+G  GG+G   +++    GA ++A   
Sbjct: 5   QLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT 62

Query: 183 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV-GGKLTKESLKLL 241
              K +  K+LG D VV+        S      A  LK  D + + V       +   LL
Sbjct: 63  SEAKREAAKALGADEVVN--------SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLL 114

Query: 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 301
                + ++G  +           ++K   + G   G              +E+L + A+
Sbjct: 115 KRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP---------ETQEMLDFCAE 165

Query: 302 GLI 304
             I
Sbjct: 166 HGI 168

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.8 bits (180), Expect = 2e-16
 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE 185
              L     T   A ++  +++     +    AG VG++A+   KVCGA  IIAV     
Sbjct: 6   LGPLGCGIQTGAGACINALKVTPASSFVT-WGAGAVGLSALLAAKVCGASIIIAVDIVES 64

Query: 186 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD-VLYDPVGGKLTKESLKLLNWG 244
           +++  K LG  HV++   +  + ++KE        GV+  L      ++ K+ +  L   
Sbjct: 65  RLELAKQLGATHVINSKTQDPVAAIKEITD----GGVNFALESTGSPEILKQGVDALGIL 120

Query: 245 AQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 302
            +I V+G            N  L+   T+ G+  GS    +       + EL+    +G
Sbjct: 121 GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKK------FIPELVRLYQQG 173

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.9 bits (180), Expect = 3e-16
 Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 17/189 (8%)

Query: 125 LAAAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182
               A+ +   TS + +  +  +S+G  Q ++V GAAG  G  A QIG + G + +    
Sbjct: 4   YFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC 63

Query: 183 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN 242
           G ++      L  +   D +      +V E L+     GVDV +D VGG ++   +  +N
Sbjct: 64  GTQEKCL--FLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 243 WGAQILVIGFASGEIPVIPAN---------IALVKNWTVHGLYWGSYKIHRPHVLEDSLR 293
             + I++ G  S     +P           I   +N T       +Y        E  + 
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNY----KDKFEPGIL 177

Query: 294 ELLLWAAKG 302
           +L  W  +G
Sbjct: 178 QLSQWFKEG 186

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.3 bits (168), Expect = 1e-14
 Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 11/177 (6%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
           AAA PV+F T+++AL  RAQ   G+ +LV  AAG +G AAVQ+ +  G  ++A A   EK
Sbjct: 6   AAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK 64

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 246
           +    +LG +     +            +  K  G   L   V GK  +ESL LL  G +
Sbjct: 65  LALPLALGAEEAATYAEVP---------ERAKAWGGLDLVLEVRGKEVEESLGLLAHGGR 115

Query: 247 ILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 303
           ++ IG A GE+  IP    + +N  V G +     +    ++E++L  LL    + L
Sbjct: 116 LVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGREL 171

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 1e-14
 Identities = 29/204 (14%), Positives = 63/204 (30%), Gaps = 61/204 (29%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  + G P +SI +            +     +  VR+++ AT++ + +   + G 
Sbjct: 7   CKAAVAWEAGKP-LSIEEI----------EVAPP-KAHEVRIKIIATAVCHTDAYTLSGA 54

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------ 96
             E    P + G   +G V++VG  V+  K GDTV                         
Sbjct: 55  DPEGCF-PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKI 113

Query: 97  ------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
                                    +    +F+++ V     +  +     +       +
Sbjct: 114 RVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNL 173

Query: 133 AFGTSHVALVHRAQLSSGQVLLVL 156
           +F   + A        S + ++ +
Sbjct: 174 SFDEINKAFELMHSGKSIRTVVKI 197

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 68.8 bits (167), Expect = 1e-14
 Identities = 32/140 (22%), Positives = 48/140 (34%), Gaps = 5/140 (3%)

Query: 135 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG 194
             S   L           +LV GA GGVG  AV +    G  ++A     E   +LK LG
Sbjct: 9   ALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLG 68

Query: 195 VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254
              V+   +                +      DPVGGK     L  + +G  + V G   
Sbjct: 69  ASEVISREDVYDGTLKALS-----KQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTG 123

Query: 255 GEIPVIPANIALVKNWTVHG 274
           G          +++  ++ G
Sbjct: 124 GGEVPATVYPFILRGVSLLG 143

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 68.3 bits (166), Expect = 2e-14
 Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 8/151 (5%)

Query: 127 AAALPVAFGTSHV---ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG 183
           A A+  A  T+ +    L           +LV GA GGVG  AV +    G T+ A    
Sbjct: 6   AMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK 65

Query: 184 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNW 243
           A +  +L+ LG   V+          + E ++    +      DPVGG+     L  + +
Sbjct: 66  AAEHDYLRVLGAKEVLAR-----EDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRY 120

Query: 244 GAQILVIGFASGEIPVIPANIALVKNWTVHG 274
           G  + V G   G       +  +++  ++ G
Sbjct: 121 GGAVAVSGLTGGAEVPTTVHPFILRGVSLLG 151

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 68.0 bits (165), Expect = 2e-14
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 17/182 (9%)

Query: 123 DLLAAAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA 181
            L+  A L  A  T++ A+   A+ L  G  + ++G  G   +A   +  +  AT+IA+ 
Sbjct: 5   KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 64

Query: 182 RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKL 240
              EK+K  + LG DHVVD   +     VK+ ++  + +GV+V  D VG + T + +  L
Sbjct: 65  VKEEKLKLAERLGADHVVDARRD----PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL 120

Query: 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300
           L    +++++G+  G     P    +    +  G   G+Y           L EL+  A 
Sbjct: 121 LGRMGRLIIVGY--GGELRFPTIRVISSEVSFEGSLVGNYV---------ELHELVTLAL 169

Query: 301 KG 302
           +G
Sbjct: 170 QG 171

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 2e-14
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 6/168 (3%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAE 185
              +   F T + A V   ++  G   +V G  GGVG++ +   K  GA+ II +    +
Sbjct: 7   VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKD 65

Query: 186 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA 245
           K +   ++G    +    +S  P  +   +                +   ++L   +   
Sbjct: 66  KFEKAMAVGATECIS-PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNY 124

Query: 246 QILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLED 290
              V +G       +    + L    T  G  +G  K     P ++ +
Sbjct: 125 GTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTE 172

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 66.5 bits (161), Expect = 9e-14
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 42/184 (22%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V    G P + I +            +P       V V+++A+ + + +     G 
Sbjct: 6   MKAAVVHAYGAP-LRIEEV----------KVPLP-GPGQVLVKIEASGVCHTDLHAAEGD 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS----------------- 103
           +  KPPLPF+PG +  G V AVG  V+  K GD V       +                 
Sbjct: 54  WPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES 113

Query: 104 -----------FAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
                      +A++++AD + +  +PK                    +  RA    G++
Sbjct: 114 QQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM--RAGQIEGRI 171

Query: 153 LLVL 156
           +L +
Sbjct: 172 VLEM 175

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (158), Expect = 1e-13
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   + G P V        + L     +P       V ++V A  +N        G 
Sbjct: 3   MRAVRVFEFGGPEV--------LKLRSDIAVPIP-KDHQVLIKVHACGVNPVETYIRSGT 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVP 119
           Y  KP LP+ PGSD +G ++AVG N S FK GD V   + + G +A++ +A    ++ +P
Sbjct: 54  YSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLP 113

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL 156
           +    +  +  P+         +     ++G+++L+L
Sbjct: 114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 30/168 (17%), Positives = 50/168 (29%), Gaps = 15/168 (8%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +AL   K  D            V  KT     L     V ++V  + +NY + L     
Sbjct: 4   FQALQAEKNADDVS---------VHVKTISTEDLPKDG-VLIKVAYSGINYKDGLAGKAG 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNV----SNFKVGDTVCGFAALGSFAQFIVADQSELF 116
                  P + G D +GTV +                   G +  G  +++       L 
Sbjct: 54  GNIVREYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLV 113

Query: 117 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 164
           P+P+   L  A    +         +      + + +L     G V V
Sbjct: 114 PLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRVIV 160

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 65.7 bits (159), Expect = 3e-13
 Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 61/204 (29%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  +   P + I +            +     +  +R+++ AT + +   L  L +
Sbjct: 9   CKAAVAWEANKP-LVIEEI----------EVDVP-HANEIRIKIIATGVCH-TDLYHLFE 55

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------ 96
            + K   P V G + +G V++VGP V+ F+ G+ V                         
Sbjct: 56  GKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKG 115

Query: 97  ------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
                                    F    +F+Q+ V +Q  +  +     L       +
Sbjct: 116 WANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRM 175

Query: 133 AFGTSHVALVHRAQLSSGQVLLVL 156
              + + A+         + +L L
Sbjct: 176 PLESVNDAIDLMKHGKCIRTVLSL 199

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 63.5 bits (153), Expect = 1e-12
 Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 32/159 (20%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPP--LPFVPGSDYSGTVDAVGPNVS 87
           PIP+      V +++    +  ++                P V G + SGTV  VG NV 
Sbjct: 19  PIPEP-KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK 77

Query: 88  NFKVGDTVCGFAALG----------------------------SFAQFIVADQSELFPVP 119
           + K GD V     +                             + A++ V        +P
Sbjct: 78  HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLP 137

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA 158
             C++            +  A    A+  +   + V+ +
Sbjct: 138 DNCNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (152), Expect = 1e-12
 Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 5/174 (2%)

Query: 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182
           D    AA+ + + T++ AL+H A + +G+ +LV GA+GGVG+AA QI +  G  I+  A 
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 183 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN 242
             E  K +   G   V +    + I  +K++      KG+D++ + +      + L LL+
Sbjct: 62  TEEGQKIVLQNGAHEVFNHREVNYIDKIKKY---VGEKGIDIIIEMLANVNLSKDLSLLS 118

Query: 243 WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL 296
            G +++V+G + G I + P +  + K  ++ G+   S           +L+  +
Sbjct: 119 HGGRVIVVG-SRGTIEINPRDT-MAKESSIIGVTLFSSTKEEFQQYAAALQAGM 170

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 61.2 bits (147), Expect = 5e-12
 Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 16/181 (8%)

Query: 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182
           +    A +  A  T +  L  +     GQ + +    GG+G  AVQ  +  G  + A+  
Sbjct: 2   EFAEIAPILCAGVTVYKGL-KQTNARPGQWVAI-SGIGGLGHVAVQYARAMGLHVAAIDI 59

Query: 183 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN 242
              K++  + LG    V+   E  + +++            VL   V      +++ +  
Sbjct: 60  DDAKLELARKLGASLTVNARQEDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMAR 115

Query: 243 WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 302
            G  I ++G   G+ P    ++ ++K   + G   G+            L+E L +A +G
Sbjct: 116 RGGTIALVGLPPGDFPTPIFDV-VLKGLHIAGSIVGTRA---------DLQEALDFAGEG 165

Query: 303 L 303
           L
Sbjct: 166 L 166

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 60.9 bits (146), Expect = 8e-12
 Identities = 29/178 (16%), Positives = 49/178 (27%), Gaps = 17/178 (9%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A++  + G+P   +  +   I          L     V V+   + +N ++  QI G 
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEI------DDDNLAP-NEVIVKTLGSPVNPSDINQIQGV 56

Query: 61  Y---------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVAD 111
           Y                   G++    V  VG NVS+ + GD V          +     
Sbjct: 57  YPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA-GGVGVAAVQ 168
             + F          A   P     +               L   G A    G   + 
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 59.5 bits (143), Expect = 3e-11
 Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
              L     T +      A +  G  + V GA      AA     +  A +I       +
Sbjct: 4   LTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG--------------- 231
           +   K+ G +      +  +   +   L       VD   D VG                
Sbjct: 63  LAHAKAQGFEIADLSLDTPLHEQIAALLGEP---EVDCAVDAVGFEARGHGHEGAKHEAP 119

Query: 232 -KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVH-GLYWG 278
             +    +++     +I + G    E P      A + + ++  GL W 
Sbjct: 120 ATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWA 168

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 58.0 bits (139), Expect = 4e-11
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           ++AL+  +    T++                 +L     V V V  +SLNY + L I GK
Sbjct: 1   LQALLLEQQDGKTLASVQTL---------DESRLPEGD-VTVDVHWSSLNYKDALAITGK 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV------CGFAALGSFAQFIVADQSE 114
            +     P +PG D++GTV         F  G  V       G    G  A+        
Sbjct: 51  GKIIRNFPMIPGIDFAGTVRTSEDP--RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW 108

Query: 115 LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 154
           L  +P+G      +          +   ++ Q   G+ L+
Sbjct: 109 LVAMPQGQAAKEISLSEAPNFAEAII-NNQIQ---GRTLV 144

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.7 bits (141), Expect = 6e-11
 Identities = 23/176 (13%), Positives = 53/176 (30%), Gaps = 38/176 (21%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY 75
           I   +      KT+  P+      + ++++A  +  ++     G +     +P V G + 
Sbjct: 12  IQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEI 70

Query: 76  SGTVDAVGPNVS-NFKVGDTVCGFAAL--------------------------------- 101
            G V  +GP  +   KVG  V   A +                                 
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYV 130

Query: 102 --GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155
             G +A ++   +  + P+P+   +            +    + +  +     L+ 
Sbjct: 131 SQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERMEKGDVRYRFTLVG 185

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 3e-10
 Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 6/154 (3%)

Query: 125 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184
               AL         A   R  ++ G  +LV GA G +G+  + + K  GA  + V   +
Sbjct: 3   FEEGALIEPLSVGIHA-CRRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 185 EKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKLLN 242
                  K +G D V+   ++     +   ++ +     +V  +  G + + +  +    
Sbjct: 61  ATRLSKAKEIGADLVLQ-ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATR 119

Query: 243 WGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 276
            G  ++++G  S     +P   A ++   + G++
Sbjct: 120 SGGTLVLVGLGSEMTT-VPLLHAAIREVDIKGVF 152

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.8 bits (133), Expect = 5e-10
 Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 16/179 (8%)

Query: 126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185
            AA L     T +  LV R     G+ + ++G  GG+G     I K  GA    ++R + 
Sbjct: 5   LAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSR 62

Query: 186 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA 245
           K +    +G DH +    E                 + V    +         K +  G 
Sbjct: 63  KREDAMKMGADHYIATLEEGDWGEKYFDTFDL----IVVCASSLTDIDFNIMPKAMKVGG 118

Query: 246 QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 304
           +I+ I        +      L K  ++     GS K          L +LL   ++  I
Sbjct: 119 RIVSISIPEQHEMLSLKPYGL-KAVSISYSALGSIK---------ELNQLLKLVSEKDI 167

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 55.4 bits (132), Expect = 6e-10
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 44/185 (23%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V  +  +P + I +             P + S   V VR+KA  + + +     G 
Sbjct: 1   MKAAVVEQFKEP-LKIKEV----------EKPTI-SYGEVLVRIKACGVCHTDLHAAHGD 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----------------------- 97
           +  KP LP +PG +  G V+ VGP V++ KVGD V                         
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH 108

Query: 98  -----FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 152
                ++  G +A++  A    +  +P    +       +         + + Q+ +G+V
Sbjct: 109 QKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEV---FDRMLKGQI-NGRV 164

Query: 153 LLVLG 157
           +L L 
Sbjct: 165 VLTLE 169

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 55.3 bits (132), Expect = 1e-09
 Identities = 25/213 (11%), Positives = 55/213 (25%), Gaps = 51/213 (23%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
              +V    G   V    +     +         +    V ++V +T++  ++   + G+
Sbjct: 2   NRGVVYLGSGKVEV---QKIDYPKMQDPRGKKIEHG---VILKVVSTNICGSDQHMVRGR 55

Query: 61  YQEKPPLPFVPG------------------------------------SDYSGTVDAVGP 84
              +  L                                           ++G    V P
Sbjct: 56  TTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNP 115

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQSE--LFPVPKGCDLLAAAALPVAFGTSHVALV 142
             +    G    G    G  A++++   ++  L  +P     +    +    G   ++L 
Sbjct: 116 ARAGGAYGYVDMGDWTGG-QAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL- 173

Query: 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175
             A    G+       AG      +   K   A
Sbjct: 174 DDAPRGYGEF-----DAGVPKKFVIDPHKTFSA 201

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 50.7 bits (121), Expect = 3e-09
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 123 DLLAAAALPVAFGT---SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179
           D   A  +  A  T     +AL           ++V GA+GGVG  AV +    G  ++A
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 180 VARGAEKIKFLKSLG 194
           V+      ++LKSLG
Sbjct: 62  VSGRESTHEYLKSLG 76

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 52.7 bits (125), Expect = 4e-09
 Identities = 21/145 (14%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           +  H    P VL   E       +   ++V  KA  +N+ +     G Y        +  
Sbjct: 4   IEFHKHGGPEVLQAVEFTPADP-AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGT 62

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKG--CDLLAAAAL 130
                                 V   +ALG+++        +   +P     D+      
Sbjct: 63  EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKY 122

Query: 131 PVAFGTSHVALVHRAQLSSGQVLLV 155
           P+        ++  ++ + G  LL+
Sbjct: 123 PLKDAQRAHEIL-ESRATQGSSLLI 146

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 52.7 bits (125), Expect = 6e-09
 Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 46/187 (24%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   ++G P +S+ +            +P+      V ++V+A  + +++     G+
Sbjct: 1   MRAVRLVEIGKP-LSLQEI----------GVPKP-KGPQVLIKVEAAGVCHSDVHMRQGR 48

Query: 61  Y-------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC----------------- 96
           +            LP   G + +G ++ VG  V  +  GD V                  
Sbjct: 49  FGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGE 108

Query: 97  ----------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ 146
                     G    G++A++++    +     +    +    + +      +  +   +
Sbjct: 109 EHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFK 168

Query: 147 LSSGQVL 153
               QVL
Sbjct: 169 AIGRQVL 175

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 52.2 bits (124), Expect = 7e-09
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 13/176 (7%)

Query: 126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185
            A  +     T        A +  G  ++V+G      +            II V     
Sbjct: 5   NAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPI 63

Query: 186 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWG 244
            ++  K  G   +++  N  +   V +    +   GVD +    GG  T  +++K++  G
Sbjct: 64  CVEAAKFYGATDILNYKNGHIEDQVMKLTNGK---GVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 245 AQILVIGFASGEIPV-IPAN--IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL 297
             I  I +      + IP       + + T+ G      ++       + LR++++
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRA-----ERLRDMVV 171

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 9e-09
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 34/156 (21%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL--PFVPGSDYSGTVDAVGPNVS 87
           PIP+      V +R+ +  +  ++             +  P V G + SGTV+ VG +V 
Sbjct: 25  PIPEP-GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK 83

Query: 88  NFKVGDTVC----------------------------GFAALGSFAQFIVADQSELFPVP 119
           + K GD V                                  G+  +F   + +  + +P
Sbjct: 84  HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLP 143

Query: 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155
                L     P+      +      +   G  +++
Sbjct: 144 DNVKPLVTHRFPLEKA---LEAFETFKKGLGLKIML 176

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 52.3 bits (124), Expect = 1e-08
 Identities = 37/205 (18%), Positives = 58/205 (28%), Gaps = 38/205 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           + A V    G     +              I Q      V V+V AT + + + +     
Sbjct: 4   IIAAVTPCKGAD-FELQAL----------KIRQP-QGDEVLVKVVATGMCHTDLIVR--D 49

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPK 120
            +   PLP V G + SG ++A+GPNV+  +VGD V                         
Sbjct: 50  QKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFF 109

Query: 121 GCDL-----------------LAAAALPVAFGTSHVALVHRAQLS------SGQVLLVLG 157
           G +                  +           +  AL                 L+   
Sbjct: 110 GRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFY 169

Query: 158 AAGGVGVAAVQIGKVCGAT-IIAVA 181
           A   +  AA+   K      II +A
Sbjct: 170 AFDEINQAAIDSRKGITLKPIIKIA 194

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 51.7 bits (122), Expect = 1e-08
 Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 14/181 (7%)

Query: 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182
           + + AA L  +  T++ A+  +A L   + LLV+GA GG+G  AVQI K      I    
Sbjct: 2   NAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 183 GAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 241
             E+     K  G D+V++ S +  +  ++   +++ +  V         K      K L
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVI--DLNNSEKTLSVYPKAL 118

Query: 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 301
               + +++G    ++      I  +      G   G+               ++  A  
Sbjct: 119 AKQGKYVMVGLFGADLHYHAPLI-TLSEIQFVGSLVGNQS---------DFLGIMRLAEA 168

Query: 302 G 302
           G
Sbjct: 169 G 169

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 51.3 bits (121), Expect = 1e-08
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 16/178 (8%)

Query: 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186
           AA +  A  T++ AL        G+ + +    GG+G  AVQ  K  G  ++AV  G EK
Sbjct: 6   AAPIFCAGVTTYKAL-KVTGAKPGEWVAI-YGIGGLGHVAVQYAKAMGLNVVAVDIGDEK 63

Query: 187 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 246
           ++  K LG D VV+           +F+K +       +   V     + +   +  G  
Sbjct: 64  LELAKELGADLVVNPLK----EDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGA 119

Query: 247 ILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 304
            +++G    E+P IP    ++    + G   G+ K          L+E L +AA+G +
Sbjct: 120 CVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------DLQEALQFAAEGKV 167

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 51.0 bits (121), Expect = 3e-08
 Identities = 37/210 (17%), Positives = 69/210 (32%), Gaps = 69/210 (32%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A +  K G P + I +            +     +  VR++V AT +   +       
Sbjct: 9   CKAAIAWKTGSP-LCIEEI----------EVSPP-KACEVRIQVIATCVCPTDINAT--D 54

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD--------------------------- 93
            ++K   P V G + +G V++VGP V+NFK GD                           
Sbjct: 55  PKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKL 114

Query: 94  -------------------------TVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAA 128
                                    ++  F  + SF+Q+ V  ++ L  V    DL    
Sbjct: 115 RNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV 174

Query: 129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGA 158
              + F + + A+     +  G+ +  +  
Sbjct: 175 THALPFESINDAI---DLMKEGKSIRTILT 201

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 48.9 bits (115), Expect = 1e-07
 Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 32/169 (18%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGS 73
           +H+   P+ + +    P+L     V VR+    + + +   + G + E  +P LP+  G 
Sbjct: 5   LHEYNKPLRI-EDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGH 63

Query: 74  DYSGTVDAVGPNVSNFKVGDTVC---------------------------GFAALGSFAQ 106
           +  G ++ V   V   + GD V                            G    G FA+
Sbjct: 64  ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAE 123

Query: 107 FIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155
           F+      +  +PK   +                L  + ++  G+ +L+
Sbjct: 124 FMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI 170

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 53/184 (28%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           ++A+       P            L   +    +      V++ +    + +++  Q+  
Sbjct: 1   IKAVGAYSAKQP------------LEPMDITRREP-GPNDVKIEIAYCGVCHSDLHQVRS 47

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC----------------------- 96
           ++      P VPG +  G V AVG  V  +  GD V                        
Sbjct: 48  EWAGTVY-PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD 106

Query: 97  -------------GFAALGSFAQFIVADQSELFPVPKGC-DLLAAAALPVAFGTSHVALV 142
                            LG ++Q IV  +  +  +     +++ A  +  A+       V
Sbjct: 107 HMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDV 166

Query: 143 -HRA 145
            +R 
Sbjct: 167 KYRF 170

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 65/205 (31%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  +   P  SI +            +     +  VR+++ AT +  ++   + G 
Sbjct: 9   CKAAVLWEEKKP-FSIEEV----------EVAPP-KAHEVRIKMVATGICRSDDHVVSGT 56

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------ 96
                PLP + G + +G V+++G  V+  + GD V                         
Sbjct: 57  LV--TPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKN 114

Query: 97  ------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
                                    F    +F+Q+ V D+  +  +     L       +
Sbjct: 115 DLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVL 174

Query: 133 AFGTSHVALVHRAQLSSGQVLLVLG 157
            F            L SG+ +  + 
Sbjct: 175 PFEK---INEGFDLLRSGESIRTIL 196

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 3e-05
 Identities = 17/138 (12%), Positives = 33/138 (23%), Gaps = 8/138 (5%)

Query: 27  KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY--SGTVDAVGP 84
           +   +    +   V+VR    S++     ++          P+         G       
Sbjct: 28  EEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGIVEES 87

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFG----TSHVA 140
                  GD V  F     +    + D + L  V             VA G         
Sbjct: 88  KHQKLAKGDFVTSF--YWPWQTKAILDGNGLEKVDPQLVDGLKVKETVAKGLENMGVAFQ 145

Query: 141 LVHRAQLSSGQVLLVLGA 158
            +        Q++ +   
Sbjct: 146 SMMTGGNVGKQIVCISED 163

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVI 207
           +G+ +LV G A G+G A  Q     GA +       E  +  +++G     VDL +E   
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDER-- 61

Query: 208 PSVKEFLKA--RKLKGVDVL 225
                F++     L  VDVL
Sbjct: 62  -ERVRFVEEAAYALGRVDVL 80

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 25/212 (11%), Positives = 57/212 (26%), Gaps = 73/212 (34%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  +   P +S+              +     +  VR+++ A+ +  ++   +  K
Sbjct: 9   CKAAVAWEPHKP-LSLETI----------TVAPP-KAHEVRIKILASGICGSDSSVL--K 54

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----------------------- 97
                  P + G +  G V+++G  V+  K GD V                         
Sbjct: 55  EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKN 114

Query: 98  -------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132
                                         +F ++ V     +  +    ++    +  +
Sbjct: 115 DMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKL 174

Query: 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 164
                        Q++    LL  G  G   +
Sbjct: 175 TL----------DQINKAFELLSSG-QGVRSI 195

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR----GAEKIKFLKSLGVDHVVDLSNE 204
           SG+ +LV GAA G+G AA+ +    GA+++AV R     AE +  L++  +  V D+S+ 
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP 63

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVG 230
             + +V           +  +    G
Sbjct: 64  KAVEAVFAEALEE-FGRLHGVAHFAG 88

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVD---HVVDL 201
            G+  ++ GA  G+G          GA+++     A+     +  ++ LG        D+
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI 69

Query: 202 SNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
           ++E  + ++ +F  + KL  VD+L +  GG
Sbjct: 70  TSEQELSALADFAIS-KLGKVDILVNNAGG 98

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVDH---VVDL 201
            G   LV G + G+G A V+     GA +   +R  ++    ++  +  G++    V DL
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL 64

Query: 202 SNESVIPSVKEFLKARKLKGVDVL 225
            + +    + + +       +++L
Sbjct: 65  LSRTERDKLMQTVAHVFDGKLNIL 88

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVV-DLSNESV 206
             + +L+ GAA G+G A +++    GA ++A       ++   +++G   VV D+++ + 
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPAS 63

Query: 207 IPSVKEFLKARKLKGVDVL 225
           +        A  L  +D +
Sbjct: 64  VERGFAEALA-HLGRLDGV 81

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-----KFLKSLGVD---HVVD 200
            G+V LV G + G+G    Q     G +++  +R  E+      K  +  GV+      D
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD 63

Query: 201 LSNESVIPSVKEFLKARKLKGVDVL 225
           +SN   +  + E +K  K   +D +
Sbjct: 64  VSNYEEVKKLLEAVKE-KFGKLDTV 87

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD---HVVDLS 202
            +V LV GA  G+G+   +     G  +   ARG E +    K L+  GV+      D+ 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 203 NESVIPSVKEFLKARKLKGVDVLYDPVG 230
           +   I ++   +  R    VDVL +  G
Sbjct: 62  SVPEIEALVAAVVER-YGPVDVLVNNAG 88

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKE 212
           +V       G+ +       G T+       ++   L++    +  +   +E       E
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQ---EPAE 60

Query: 213 FLKA--RKLKGVDVL 225
            ++A       VDVL
Sbjct: 61  LIEAVTSAYGQVDVL 75

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVD---HVVDL 201
             + +LV G   G+G A V+     GA I   AR   +    +   +  G      V D 
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA 66

Query: 202 SNESVIPSVKEFLKARKLKGVDVL 225
           S       + + + +     +D+L
Sbjct: 67  SLRPEREKLMQTVSSMFGGKLDIL 90

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 38.2 bits (88), Expect = 8e-04
 Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 13/150 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----IKFLKSLGVDHV---VD 200
            G+V+++ G++ G+G +         A ++   R  E      ++ +K +G + +    D
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD 65

Query: 201 LSNESVIPSVKEFLKARKLKGVDVLY--DPVGGKLTKESLKLLNWGAQIL--VIGFASGE 256
           ++ ES + ++ +     +   +DV+     +   ++   + L +W   I   + G   G 
Sbjct: 66  VTVESDVINLVQSAIK-EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 257 IPVIPANIALVKNWTVHGLYWGSYKIHRPH 286
              I   +      TV  +     KI  P 
Sbjct: 125 REAIKYFVENDIKGTVINMSSVHEKIPWPL 154

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 37.6 bits (86), Expect = 8e-04
 Identities = 27/201 (13%), Positives = 50/201 (24%), Gaps = 58/201 (28%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+      +                   +  P   S     VR  A S   ++   +   
Sbjct: 1   MKGFAMLGINKLGW------------IEKERPVAGS-YDAIVRPLAVSPCTSDIHTVFEG 47

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL------------------- 101
                    + G +  G V  VG  V +FK GD V                         
Sbjct: 48  ALGDRK-NMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGM 106

Query: 102 -----------GSFAQFIVADQSE--LFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148
                      G F ++   + ++  L  +PK  DL  +  +   +              
Sbjct: 107 LAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDL--SKLVTHVYHGFDHI-------- 156

Query: 149 SGQVLLVLGAAGGVGVAAVQI 169
             + LL++       +    +
Sbjct: 157 -EEALLLMK-DKPKDLIKAVV 175

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD---HVVDLSNE 204
           SG+ +++ G A G+G  A +     GA ++      E+     + LG       +D++ E
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE 63

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVG 230
                V  + +      VD L +  G
Sbjct: 64  EDWQRVVAYAREE-FGSVDGLVNNAG 88

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHV-VDLSNES 205
           SG   LV GA  G+G   V+     GA ++AV R    +  L     G++ V VDL +  
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD 63

Query: 206 VIPSVKEFLKARKLKGVDVL 225
              + ++ L    +  VD+L
Sbjct: 64  ---ATEKALG--GIGPVDLL 78

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHV-VDLSNES 205
           +G+ +LV GA  G+G   VQ     GA ++AV+R    +  L     G++ V VDL +  
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE 65

Query: 206 VIPSVKEFLKARKLKGVDVLYDPVG 230
              + +  L    +  VD+L +   
Sbjct: 66  ---ATERALG--SVGPVDLLVNNAA 85

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV---VDLSNE 204
            G+V LV G A GVG+  V++    GA +          + L   LG   +    D+S+E
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSE 64

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVG 230
           +    V   ++ R L  ++VL +  G
Sbjct: 65  ADWTLVMAAVQRR-LGTLNVLVNNAG 89

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 10/91 (10%)

Query: 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD-----HVVD 200
            ++ LV GA+GG+G A  +     G  ++  AR    I       KS G       +  D
Sbjct: 10  DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD 69

Query: 201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
           LSNE  I S+   ++++   GVD+  +  G 
Sbjct: 70  LSNEEDILSMFSAIRSQ-HSGVDICINNAGL 99

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVDHVVDLSNE 204
           +G+V LV G A G+G + V+     GA ++      E+       L        +D++  
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP 64

Query: 205 SVIPSVKEFLKARKLKGVDVL 225
           +   +  +        G+ VL
Sbjct: 65  AQWKAAVDTAVTA-FGGLHVL 84

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD---HVVDL 201
           +G+++L+ GA  G+G           + ++        +       K LG      VVD 
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC 65

Query: 202 SNESVIPSVKEFLKARKLKGVDVL 225
           SN   I S  + +KA  +  V +L
Sbjct: 66  SNREDIYSSAKKVKAE-IGDVSIL 88

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT--IIAVARGAEKIKFLKSLGVDHV----VDLS 202
           S   ++V GA  G+G+  VQ          IIA AR  EK   LKS+    V    + ++
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 203 NESVIPSVKEFLKAR-KLKGVDVLYDPVGG 231
            +  + +    +       G+ +L +  G 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGV 91

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVD---HVVDLSNE 204
            G+  L+ G+A G+G A  +     GA +       E  +     +G       +D++++
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQ 63

Query: 205 SVIPSVKEFLKARKLKGVDV 224
           + I      L   +   +D+
Sbjct: 64  ASIDRCVAELLD-RWGSIDI 82

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 8/133 (6%)

Query: 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK----FLKSLGVD---HVVDLSNE 204
           V LV GA  G+G A        G  +          K     +   G       VD+S+ 
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANI 264
             + +  E  +   L G DV+ +  G   +     +       +      G I  I A +
Sbjct: 63  DQVFAAVEQARKT-LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 265 ALVKNWTVHGLYW 277
              K     G   
Sbjct: 122 EAFKKEGHGGKII 134

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVDH---VVDL 201
            G   LV G + G+G   V+     GA++   +R  +++       +S G      V DL
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL 66

Query: 202 SNESVIPSVKEFLKARKLKGVDV 224
           S+ S    +   +       +++
Sbjct: 67  SSRSERQELMNTVANHFHGKLNI 89

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 15/95 (15%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD------HV 198
           S + +++ G++ G+G     +    GA +    R +E++    + +   GV        V
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 199 VDLSNESVIPSVKEFLKA--RKLKGVDVLYDPVGG 231
            D++ E       + + +  ++   +DVL +  G 
Sbjct: 64  ADVTTED---GQDQIINSTLKQFGKIDVLVNNAGA 95

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Length = 304

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Coenzyme PQQ synthesis protein B, PqqB
domain: Coenzyme PQQ synthesis protein B, PqqB
species: Pseudomonas putida [TaxId: 303]

 Score = 36.7 bits (83), Expect = 0.003
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 273 HGLYWGSYKIHRPHV-LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 331
            G   G    H         L  L  +  +  + IHI++T    + N    A   R+   
Sbjct: 234 VGTRTGREMGHLAQNGPGGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRR--- 290

Query: 332 KVMIAFDDMK 341
            V +AFD M 
Sbjct: 291 GVEVAFDGMS 300

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-----KFLKSLGVD---HVVD 200
             + ++V G   G+G+A  +     GA +  + R A        K  K  GV    +  D
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 67

Query: 201 LSNESVIPSVKEFLKARKLKGVDVLY 226
           +SN  ++    + + A  L  +  L 
Sbjct: 68  VSNTDIVTKTIQQIDA-DLGPISGLI 92

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSLGVD---HVVDLSN 203
             ++ ++ G A G+G A  +   V GA I              +++LG        D+S 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ 63

Query: 204 ESVIPSVKEFLKA--RKLKGVDVL 225
                 V+ F K         D+L
Sbjct: 64  PG---DVEAFGKQVISTFGRCDIL 84

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----IKFLKSLGVDHV---VD 200
           +G+V L  GA  G+G          GA+++     + K     +  LK LG   V    D
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD 64

Query: 201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231
           +S  S + ++ +   +    G+D +    G 
Sbjct: 65  ISKPSEVVALFDKAVSH-FGGLDFVMSNSGM 94

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD------HV 198
           SG+ +++ G++ G+G +A  I    GA +    R  +++    + +   GV        V
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 199 VDLSNESVIPSVKEFLKARKLKGVDVL 225
            D++  S    +     A+    +D+L
Sbjct: 63  ADVTEASGQDDIINTTLAK-FGKIDIL 88

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD---HVVDLSNES 205
           +G+V++V G   G+G   V+     GA ++   +     + L+         + D++ E 
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQED 64

Query: 206 VIPSVKEFLKA 216
               VK  +  
Sbjct: 65  ---DVKTLVSE 72

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD---HVVDL 201
           +G+V LV GA G +G+A        G  I  +    E +      ++  GV+   +V D+
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV 63

Query: 202 SNESVIPSVKEFLKAR 217
           ++E  +    + +   
Sbjct: 64  TSEEAVIGTVDSVVRD 79

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD-----HVVDLS 202
            G+V ++ G   G+G+A        GA ++   R ++   K  KS+G          D S
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSS 64

Query: 203 NESVIPSVKEFLKARKLKGVDVL 225
           +E     + +  +      V  L
Sbjct: 65  DEDGWTKLFDATEK-AFGPVSTL 86

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD---HVVDLSNE 204
            G+ +L+ G A G+G A V      GA +  + + AE++  L    G +    V D+ + 
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSL 63

Query: 205 SVIPSVKEFLKAR 217
                      AR
Sbjct: 64  EDQKQAASRCVAR 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	347
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	100.0
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.97
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.96
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.95
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.93
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.92
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.92
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.72
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.64
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.62
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.3
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.27
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.25
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.14
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.04
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.03
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.98
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.96
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.94
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.94
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.92
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.92
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.9
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.9
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.9
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.89
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.89
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.88
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.88
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.88
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.87
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.85
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.84
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.83
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.81
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.81
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.79
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.79
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.77
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.77
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.75
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.74
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.72
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.71
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.7
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.7
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.69
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.69
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.69
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.68
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.68
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.67
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.67
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.66
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.66
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.65
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.64
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.63
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.63
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.56
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.53
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.52
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.5
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.47
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.46
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.46
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.45
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.44
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.44
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.4
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.4
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.4
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.39
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.37
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.35
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.35
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.34
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.33
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.26
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.25
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.24
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.2
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.2
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.18
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.15
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.12
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.11
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.04
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.03
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.02
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.01
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.96
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.95
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.94
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.91
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.87
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.87
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.84
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.83
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.81
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.8
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.79
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.74
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.67
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.63
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.61
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.6
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.59
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.59
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.54
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.53
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.51
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.43
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.43
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.4
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.33
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.26
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.25
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.2
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.17
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.15
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.13
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.04
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.96
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.94
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.89
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.88
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.88
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.83
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.82
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.74
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.69
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.69
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.67
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.65
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.65
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.58
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.58
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.58
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.57
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.53
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.5
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.47
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.43
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.43
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.42
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.41
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.4
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.4
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.38
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.34
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.33
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.3
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.26
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.25
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.2
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.14
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.14
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.13
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.12
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.05
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	95.04
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.0
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.98
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.97
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.9
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.9
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.86
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.84
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.79
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.78
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.77
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.74
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	94.69
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.67
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.65
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.5
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.49
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.4
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.35
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.32
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.3
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.26
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.23
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.1
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.08
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.98
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.93
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	93.79
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.77
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	93.69
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.68
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.54
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.52
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	93.52
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.5
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.48
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.4
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.37
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.37
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.31
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.23
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.21
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.11
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.06
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.05
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.02
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.01
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.92
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.91
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.77
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.67
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.65
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.59
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.53
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.46
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.43
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.18
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.14
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.11
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	92.09
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.03
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.97
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.71
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	91.64
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	91.63
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.58
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	91.51
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.48
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.37
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.35
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.29
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	91.25
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	91.24
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.22
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	91.17
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	91.16
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.12
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.05
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.88
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.8
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.79
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.74
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	90.73
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.44
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	90.23
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	90.17
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.16
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	90.06
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	89.81
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	89.78
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.75
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	89.72
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	89.7
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	89.67
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.61
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	89.53
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.48
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.35
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.35
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	89.31
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.28
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	89.25
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.16
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.03
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.94
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	88.94
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.92
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.86
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.53
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.45
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	88.17
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.16
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.01
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.89
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	87.71
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.61
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	87.44
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.41
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.12
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.09
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	87.02
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.99
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	86.95
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	86.95
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.83
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.63
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.6
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.59
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.48
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.46
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.21
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	86.13
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.81
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.74
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	85.48
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	85.42
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	85.38
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	85.29
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.2
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	85.15
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	85.06
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.95
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	84.87
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.83
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	84.58
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	84.23
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.16
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.12
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	84.12
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	83.96
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	83.92
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	83.87
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	83.76
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	83.47
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	83.39
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	83.36
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	83.26
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	83.18
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	83.17
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.93
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	82.63
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	82.52
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.45
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	82.42
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	81.93
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	81.74
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	81.73
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	81.73
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	81.64
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	81.63
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	81.32
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.29
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	81.22
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.73
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.59
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.06

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-32  Score=213.89  Aligned_cols=147  Identities=27%  Similarity=0.481  Sum_probs=135.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|+|+.        +.+.+|.+.|+ |++|||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         3 MkAv~~~~~G~p~~--------l~~~~~~~~P~-~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~   73 (150)
T d1yb5a1           3 MRAVRVFEFGGPEV--------LKLRSDIAVPI-PKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIE   73 (150)
T ss_dssp             EEEEEESSCSSGGG--------EEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEE
T ss_pred             eeEEEEEccCCcce--------EEEEeecCCCC-CCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeE
Confidence            99999999999854        44455789999 6999999999999999999999999887777889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      ++|+++++|++||||++.. .+|+|+||++++++.++++|+++++++||+++....|+|+++...+....|+++||.
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          74 AVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecceeeccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999998875 469999999999999999999999999999999999999999888999999999984

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=9.5e-31  Score=211.16  Aligned_cols=180  Identities=27%  Similarity=0.339  Sum_probs=161.9

Q ss_pred             HHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCC
Q 019049          125 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE  204 (347)
Q Consensus       125 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~  204 (347)
                      +|||++|++++|||+++++.+++++|++|||+|++|++|++++|+|+.+|++|+++++++++.++++++|+++++++++.
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV   80 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  284 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (347)
                      ++   .+++.+.+++.++|++|||+|++.++.++++++++|+++.+|..............+.++.++.++.+.......
T Consensus        81 ~~---~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (183)
T d1pqwa_          81 DF---ADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQ  157 (183)
T ss_dssp             TH---HHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHC
T ss_pred             CH---HHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccC
Confidence            88   788889999999999999999999999999999999999998765443333333456789999998877777778


Q ss_pred             chhHHHHHHHHHHHHHcCceeee
Q 019049          285 PHVLEDSLRELLLWAAKGLITIH  307 (347)
Q Consensus       285 ~~~~~~~~~~~~~~l~~g~l~~~  307 (347)
                      +...++.++++++++.+|+++|.
T Consensus       158 ~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         158 PARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCcee
Confidence            88888999999999999999974

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.3e-30  Score=196.26  Aligned_cols=131  Identities=29%  Similarity=0.500  Sum_probs=120.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|++           +.+++++.|+ |+++||+||+.++++|++|++.+.|.++....+|+++|||++|+| 
T Consensus         1 MkA~~~~~~G~~-----------l~~~e~~~p~-p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP-----------LELVDLPEPE-AEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-   67 (131)
T ss_dssp             CEEEEECSTTSC-----------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-
T ss_pred             CcEEEEccCCCC-----------CEEEEccCCC-CCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-
Confidence            999999999986           5567899999 699999999999999999999999998777789999999999999 


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                                +||+|+++..+|+|+||++++++.++++|+++|+++||++++.+.|||+++.+.+  +.|++||+.
T Consensus        68 ----------vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 ----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             ----------TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             ----------ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence                      4999999999999999999999999999999999999999999999999996655  569999873

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=6.1e-30  Score=204.24  Aligned_cols=142  Identities=26%  Similarity=0.405  Sum_probs=126.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|+|           +.++|+|.|. |+++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+
T Consensus         6 MkA~v~~~~g~p-----------l~l~evp~P~-~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~   73 (175)
T d1llua1           6 MKAAVVHAYGAP-----------LRIEEVKVPL-PGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVA   73 (175)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEECCC-CCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEE
T ss_pred             cEEEEEEeCCCC-----------CEEEEeECCC-CCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEE
Confidence            999999999987           4557899999 5999999999999999999999999887667789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++++++++||||+..                            ..+|+|+||+++++++++++|++++++.++++..
T Consensus        74 ~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~  153 (175)
T d1llua1          74 AVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLD  153 (175)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGG
T ss_pred             EeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHh
Confidence            999999999999999631                            2347999999999999999999999998888889


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEe
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      ++.++++.+ + ++..+|++|||+
T Consensus       154 ~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         154 DINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             GHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             HHHHHHHHH-H-hCCCCCCEEEeC
Confidence            999999887 3 344479999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=5.8e-30  Score=202.98  Aligned_cols=141  Identities=20%  Similarity=0.357  Sum_probs=125.8

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTV   79 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V   79 (347)
                      ||+++.++|+|           +.+++++.|++|++|||+||+.++++|++|++.+.|..+.  .+.+|+++|||++|+|
T Consensus         1 kA~~~~~~g~p-----------l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V   69 (171)
T d1h2ba1           1 KAARLHEYNKP-----------LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYI   69 (171)
T ss_dssp             CEEEESSTTSC-----------CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEE
T ss_pred             CEEEEEeCCCC-----------CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeee
Confidence            79999999987           5567999998667899999999999999999999887642  3467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEe---------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           80 DAVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      +++|++++++++||||+..                           ..+|+|+||+++++++++++|++++++.++++.+
T Consensus        70 ~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~  149 (171)
T d1h2ba1          70 EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLD  149 (171)
T ss_dssp             EEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGG
T ss_pred             ecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHh
Confidence            9999999999999999753                           2358999999999999999999999998988999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEE
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      ++.|+|+++ +.+.+ .|++|||
T Consensus       150 ~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         150 EINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             GHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             HHHHHHHHH-HhcCC-CCCEEEe
Confidence            999999998 56778 8999998

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-29  Score=202.51  Aligned_cols=153  Identities=27%  Similarity=0.394  Sum_probs=139.6

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +|+++||+++++++|||++|++.+++++|++|||+|++|++|++++|+|+.+|++|++++++++|.+.++++|+++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~   80 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH   80 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence            68999999999999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      ++.++   .+.+.+.+++.++|++|||+|++.++.++++++++|+++.+|..+.  ..++...++.+++++.++.+..
T Consensus        81 ~~~~~---~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~--~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          81 REVNY---IDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TSTTH---HHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC--EEECTHHHHTTTCEEEECCGGG
T ss_pred             ccccH---HHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC--CCCCHHHHHHCCCEEEEEEecC
Confidence            99888   7888889999999999999999889999999999999999986442  2345567789999999987544

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=3.2e-30  Score=206.41  Aligned_cols=145  Identities=21%  Similarity=0.225  Sum_probs=125.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (347)
                      |.|+++.++++            +.++|+|.|+ |+++||+||+.+++||++|++.+.+...  .....|+++|||++|+
T Consensus         2 ~maAVl~g~~~------------l~~~e~~~P~-~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~   68 (178)
T d1e3ja1           2 NLSAVLYKQND------------LRLEQRPIPE-PKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGT   68 (178)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             ceEEEEEcCCc------------EEEEEeECCC-CCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceE
Confidence            34555666664            4458999999 5999999999999999999999987542  2335789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccC
Q 019049           79 VDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAAL  130 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  130 (347)
                      |+++|+++++|++||||+..                            ..+|+|+||++++++.++++|++++++++|.+
T Consensus        69 Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  148 (178)
T d1e3ja1          69 VVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTH  148 (178)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEE
T ss_pred             EEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHH
Confidence            99999999999999999632                            23589999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049          131 PVAFGTSHVALVHRAQLSSGQVLLVLGAA  159 (347)
Q Consensus       131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~  159 (347)
                      ++++.|+|+++ +.+++++|++|+|+|++
T Consensus       149 ~~~~~ta~~a~-~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         149 SFKLEQTVDAF-EAARKKADNTIKVMISC  176 (178)
T ss_dssp             EEEGGGHHHHH-HHHHHCCTTCSEEEEEC
T ss_pred             HhHHHHHHHHH-HHhCCCCCCEEEEEccc
Confidence            99999999998 68899999999999975

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=1.4e-29  Score=201.56  Aligned_cols=142  Identities=28%  Similarity=0.461  Sum_probs=122.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|+|           +.++|++.|+ |++|||+|||.+++||++|++.+.+.......+|.++|||++|+|+
T Consensus         1 MkA~v~~~~g~p-----------l~i~~v~~P~-~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv   68 (171)
T d1rjwa1           1 MKAAVVEQFKEP-----------LKIKEVEKPT-ISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVE   68 (171)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEE
T ss_pred             CeEEEEecCCCC-----------cEEEEeECCC-CCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEE
Confidence            999999999987           4557899999 5999999999999999999999988776667889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEE----------------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049           81 AVGPNVSNFKVGDTVCG----------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV  132 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~  132 (347)
                      ++|++++++++||||+.                            +..+|+|+||+++++++++++|++++++.|+ + .
T Consensus        69 ~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l-~  146 (171)
T d1rjwa1          69 EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-L-E  146 (171)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-G-G
T ss_pred             EecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-H-H
Confidence            99999999999999952                            1234899999999999999999999986654 4 3


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecC
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGA  158 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~  158 (347)
                      .+.++++++ ..+.+ +|++|||+|.
T Consensus       147 ~~~~~~~~~-~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         147 KINEVFDRM-LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred             HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence            566777776 34555 5999999985

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=8e-29  Score=198.98  Aligned_cols=178  Identities=26%  Similarity=0.281  Sum_probs=150.5

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +|+++||+++++++|||++|++.+++++|++|||+|++|++|++++|+|+..|++|++++++++|+++++++|+++++|+
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~   80 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY   80 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEEC
Confidence            58999999999999999999988999999999999998999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhc-ceEEEEEEeccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSY  280 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  280 (347)
                      +++++   .+++.+.|++.++|+++|++|++.+..++.+++++|+++.++.........+...+..+ ...+....+..+
T Consensus        81 ~~~d~---~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  157 (179)
T d1qora2          81 REEDL---VERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGY  157 (179)
T ss_dssp             TTSCH---HHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             CCCCH---HHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEeee
Confidence            99998   78888999999999999999999999999999999999998877665555554444443 344333333222


Q ss_pred             cccCchhHHHHHHHHHHHHHcCc
Q 019049          281 KIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                       ...++...+.++++++++++|.
T Consensus       158 -~~~~~~~~~~~~~l~~lv~~Gv  179 (179)
T d1qora2         158 -ITTREELTEASNELFSLIASGV  179 (179)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHTTS
T ss_pred             -cCCHHHHHHHHHHHHHHHHCcC
Confidence             2344555677788889988873

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=5.2e-29  Score=197.13  Aligned_cols=172  Identities=23%  Similarity=0.259  Sum_probs=141.0

Q ss_pred             CCHHHHccCcchHHHHHHHHH---HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE
Q 019049          122 CDLLAAAALPVAFGTSHVALV---HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV  198 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v  198 (347)
                      +|++|||++|.+++|||+++.   ..++..+|++|||+|++|++|.+++|+++..|++|+++++++++.++++++|++++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v   80 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV   80 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence            689999999999999997754   45778899999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEec
Q 019049          199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      +|+++.     ..+....+++.++|+|||++|++.+..++++|+++|+++.+|...+....++...++.|++++.|+...
T Consensus        81 i~~~~~-----~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~  155 (176)
T d1xa0a2          81 LAREDV-----MAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSV  155 (176)
T ss_dssp             EECC--------------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSS
T ss_pred             eecchh-----HHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCC
Confidence            998653     234456677889999999999999999999999999999999988877778889999999999997432


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCceee
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGLITI  306 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~  306 (347)
                      .    .|   .+...++++.+. +.++|
T Consensus       156 ~----~~---~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         156 Y----CP---MDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             S----CC---HHHHHHHHHHHH-TTTCC
T ss_pred             c----CC---HHHHHHHHHHHh-cccCC
Confidence            2    11   234444555553 66654

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=7.3e-29  Score=191.80  Aligned_cols=142  Identities=22%  Similarity=0.334  Sum_probs=123.5

Q ss_pred             ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (347)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (347)
                      +.+.+.++|.|++         +.+++.+.|+ |++|||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|++
T Consensus         2 ~~i~~~~~G~pe~---------l~~~e~~~P~-p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~   70 (147)
T d1qora1           2 TRIEFHKHGGPEV---------LQAVEFTPAD-PAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSK   70 (147)
T ss_dssp             EEEEBSSCCSGGG---------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEE
T ss_pred             eEEEEcccCCCce---------eEEEEecCCC-CCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceee
Confidence            4578899999875         5567899999 59999999999999999999999998763 56899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEe-cCCCcceeeEeeeCCCeeeCCCCCCHHH--HccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049           82 VGPNVSNFKVGDTVCGF-AALGSFAQFIVADQSELFPVPKGCDLLA--AAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus        82 vG~~v~~~~~Gd~V~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      +|+++++|++||||+.. ...|+|++|++++.+.++++|+++++++  +++++....++++++. ..++++|++|||
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~-~~~~~~G~~VLI  146 (147)
T d1qora1          71 VGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI  146 (147)
T ss_dssp             ECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHH-HTTCCCBCCEEE
T ss_pred             eeeecccccccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEe
Confidence            99999999999999754 3569999999999999999999998874  4555677788888874 478999999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=4.6e-29  Score=202.75  Aligned_cols=143  Identities=19%  Similarity=0.306  Sum_probs=128.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|+|           +.++|++.|+ |+++||+|||.++|+|++|++.+.+... +..+|.++|||++|+|+
T Consensus         9 ~kAav~~~~~~p-----------l~i~ev~~P~-p~~~eVlIkv~a~giCgsD~~~~~g~~~-~~~~p~i~GhE~~G~v~   75 (199)
T d1cdoa1           9 CKAAVAWEANKP-----------LVIEEIEVDV-PHANEIRIKIIATGVCHTDLYHLFEGKH-KDGFPVVLGHEGAGIVE   75 (199)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTTCC-TTSCSEECCCCEEEEEE
T ss_pred             EEEEEEecCCCC-----------cEEEEEECCC-CCCCEEEEEEEEEEEecchhhhhhhccc-ccccccccccccceEEE
Confidence            579999999987           5668999999 6999999999999999999999998653 34679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|+++.+|++||||....                                                .+|+|+||+++++
T Consensus        76 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~  155 (199)
T d1cdoa1          76 SVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQ  155 (199)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEG
T ss_pred             EEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEch
Confidence            9999999999999995321                                                1389999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      +.++++|++++++++|++.+++.|++.++......+.|++|||+
T Consensus       156 ~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         156 IAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             GGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999999999999999888889999999984

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.96  E-value=9.8e-29  Score=199.71  Aligned_cols=182  Identities=23%  Similarity=0.282  Sum_probs=154.7

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe-cCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHHhcCCc
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL-GAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLKSLGVD  196 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~-g~~g~~G~~~~~la~~~g~~V~~~~~~~~----~~~~~~~~g~~  196 (347)
                      +|+++||++++.++|||++|.+.+++++|++|+|+ |++|++|++++|+||.+|++|++++++++    +.+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            68999999999999999999989999999988886 77899999999999999999999986644    45677899999


Q ss_pred             EEEeCCCCCchhhHHHHHHHh--cCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEE
Q 019049          197 HVVDLSNESVIPSVKEFLKAR--KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG  274 (347)
Q Consensus       197 ~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  274 (347)
                      +++++++.+..+..+.+.+.+  .+.++|++|||+|++.+..++++|+++|+++.+|..++....++...++.|++++.|
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~G  160 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAG  160 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEEE
Confidence            999876543323233444432  467899999999999999999999999999999977665556777888899999999


Q ss_pred             EEeccccccCchhHHHHHHHHHHHHHcCc
Q 019049          275 LYWGSYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      +++..+...+++...+.++++++++++|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         161 FWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             CCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99888888888888899999999999885

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=9.1e-29  Score=192.27  Aligned_cols=143  Identities=25%  Similarity=0.373  Sum_probs=126.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|++..         ..+++++.|+ |++|||+|||.++|+|++|++.+.|.++.....|+++|+|++|+|+
T Consensus         4 ~KA~v~~~~~~~~~---------~~i~~v~~P~-~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~   73 (152)
T d1xa0a1           4 FQAFVVNKTETEFT---------AGVQTISMDD-LPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVV   73 (152)
T ss_dssp             EEEEEEEEETTEEE---------EEEEEEEGGG-SCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEE
T ss_pred             eEEEEEEecCCceE---------EEEEEccCCC-CCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeee
Confidence            79999999998732         3467999999 5999999999999999999999999887777889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  154 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl  154 (347)
                      +  ..+..+++||+|++..      .+|+|+||++++++.++++|+++|+ +||+++++.+|+|.++...++++ |++||
T Consensus        74 ~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL  149 (152)
T d1xa0a1          74 S--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVV  149 (152)
T ss_dssp             E--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEE
T ss_pred             c--cCCCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEE
Confidence            8  5678899999998764      3599999999999999999999985 68889899999999887888885 99999


Q ss_pred             Eec
Q 019049          155 VLG  157 (347)
Q Consensus       155 I~g  157 (347)
                      |+|
T Consensus       150 ~l~  152 (152)
T d1xa0a1         150 RLA  152 (152)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            975

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=198.08  Aligned_cols=143  Identities=18%  Similarity=0.254  Sum_probs=127.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|++           +.++++|.|+ |+++||||||.++|||++|++.+.|.+. ...+|+++|||++|+|+
T Consensus         7 ~kAav~~~~g~~-----------l~i~evp~P~-p~~~eVLVkv~a~gic~sD~~~~~G~~~-~~~~p~v~GhE~~G~V~   73 (197)
T d2fzwa1           7 CKAAVAWEAGKP-----------LSIEEIEVAP-PKAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAGIVE   73 (197)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             EEEEEEccCCCC-----------CEEEEEECCC-CCCCEEEEEEEEecCCCCcHHHHcCCcc-cccccccCCcceeeEEE
Confidence            899999999987           6668999999 6999999999999999999999999754 34689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|++++++++||+|+...                                                .+|+|+||+++++
T Consensus        74 ~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~  153 (197)
T d2fzwa1          74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVAD  153 (197)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             eecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEech
Confidence            9999999999999996320                                                1389999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  156 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~  156 (347)
                      ..++++|++++++++|++++++.+++.++.....-+.+++|+|+
T Consensus       154 ~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         154 ISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             GGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999999999999998665556788899884

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.95  E-value=2.2e-27  Score=190.64  Aligned_cols=169  Identities=27%  Similarity=0.399  Sum_probs=148.3

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ++++++++|||++|++.+++++|++|||+|++|++|++++|+++..|++|+++++++++.++++++|+++++++++.++ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~-   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS-   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSC-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccH-
Confidence            4678899999999999999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCC------CCCCcchhHhhhcceEEEEEEecccc
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG------EIPVIPANIALVKNWTVHGLYWGSYK  281 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (347)
                        .+.+.+.+++.++|++|||+|.+.++.++++++++|+++.+|..+.      ....+....++.|++++.|++..++ 
T Consensus        87 --~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~-  163 (182)
T d1v3va2          87 --LEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW-  163 (182)
T ss_dssp             --HHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGC-
T ss_pred             --HHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEecc-
Confidence              7778888899999999999999999999999999999999986432      1122444668899999999876554 


Q ss_pred             ccCchhHHHHHHHHHHHHHcC
Q 019049          282 IHRPHVLEDSLRELLLWAAKG  302 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~l~~g  302 (347)
                        .++...+.++++++++.+|
T Consensus       164 --~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         164 --QGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             --CHHHHHHHHHHHHHHHHTT
T ss_pred             --ChHHHHHHHHHHHHHHhCc
Confidence              3445567889999998876

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3.6e-28  Score=192.96  Aligned_cols=164  Identities=34%  Similarity=0.475  Sum_probs=132.8

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +|+++||+++++++|||+++. .+++++|++|||+|++|++|++++|+|+..|++|++++++++|++.++++|+++++|+
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeeh
Confidence            589999999999999999995 5899999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  281 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (347)
                      .+.        ..+.+.+.++|++|||+| +.++.++++++++|+++.+|..++....++...++.|++++.|++...+.
T Consensus        80 ~~~--------~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~~  150 (171)
T d1iz0a2          80 AEV--------PERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLL  150 (171)
T ss_dssp             GGH--------HHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred             hhh--------hhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcChh
Confidence            531        234456789999999988 57899999999999999999877665567778889999999999877654


Q ss_pred             ccCchhHHHHHHHHH
Q 019049          282 IHRPHVLEDSLRELL  296 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~  296 (347)
                      + .+....+.+..+.
T Consensus       151 ~-~~~~~~~~~~~l~  164 (171)
T d1iz0a2         151 R-EGALVEEALGFLL  164 (171)
T ss_dssp             T-CHHHHHHHHHHHG
T ss_pred             h-hHHHHHHHHHHHH
Confidence            3 3333333333333

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=3e-27  Score=187.98  Aligned_cols=168  Identities=27%  Similarity=0.340  Sum_probs=151.5

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEe
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      +|+.|||++++++.|||+++ +..+++++++|+|+|++|++|++++|+++..|+ +|++++.+++|++.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999998 668999999999999889999999999999996 8999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      +++.++   .+++.+.+.+.++|++|||+|+ ..++.++++++++|+++.+|....+. .++...++.+++++.|++.++
T Consensus        80 ~~~~~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQDP---LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSCH---HHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCC
T ss_pred             cCCcCH---HHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCcc-ccCHHHHHhCCcEEEEEecCC
Confidence            998888   7788888988999999999998 46789999999999999999776553 467778899999999987665


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCc
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                               +++++++++++++|+
T Consensus       156 ---------~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 ---------QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             ---------HHHHHHHHHHHHTTS
T ss_pred             ---------HHHHHHHHHHHHcCC
Confidence                     578999999999886

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=2.9e-28  Score=198.81  Aligned_cols=140  Identities=26%  Similarity=0.386  Sum_probs=123.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|+|           +.++|+|.|+ |+++||||||.++|||++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         9 ~KAaV~~~~g~p-----------l~i~evp~P~-p~~geVlVkv~a~gic~sD~~~~~G~~~--~~~P~v~GHE~~G~V~   74 (202)
T d1e3ia1           9 CKAAIAWKTGSP-----------LCIEEIEVSP-PKACEVRIQVIATCVCPTDINATDPKKK--ALFPVVLGHECAGIVE   74 (202)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHTTCTTSC--CCSSBCCCCEEEEEEE
T ss_pred             EEEEEEccCCCC-----------CEEEEEECCC-CCCCEEEEEEEEEEEeccccceeeeecc--cccccccccccceEEe
Confidence            899999999987           6668999999 6999999999999999999999998764  4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------------------------------CCCcceeeE
Q 019049           81 AVGPNVSNFKVGDTVCGFA----------------------------------------------------ALGSFAQFI  108 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~----------------------------------------------------~~g~~~~~~  108 (347)
                      ++|++++++++||||+...                                                    ..|+|+||+
T Consensus        75 ~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~  154 (202)
T d1e3ia1          75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYT  154 (202)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             eecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEE
Confidence            9999999999999996421                                                    128999999


Q ss_pred             eeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049          109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus       109 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      ++++..++++|++++++.++++.+++.+++.++. .  +++|++|.|+.
T Consensus       155 ~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~-~--~k~G~~V~vi~  200 (202)
T d1e3ia1         155 VVSEANLARVDDEFDLDLLVTHALPFESINDAID-L--MKEGKSIRTIL  200 (202)
T ss_dssp             EEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHH-H--HHTTCCSEEEE
T ss_pred             EEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHH-h--CCCCCEEEEEE
Confidence            9999999999999999999999899888888773 2  46788887763

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=6.4e-28  Score=193.89  Aligned_cols=145  Identities=15%  Similarity=0.259  Sum_probs=121.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.+++...        .+.+. +++.+. ++|+||+||+.++|||++|++.+.|.++ ...+|+++|||++|+|+
T Consensus         7 ~ka~~~~~~~~~~--------~~~~~-~~~p~p-~~~~eVlVkv~a~giC~sDl~~~~g~~~-~~~~P~i~GHE~~G~Vv   75 (192)
T d1piwa1           7 FEGIAIQSHEDWK--------NPKKT-KYDPKP-FYDHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEIVGKVV   75 (192)
T ss_dssp             EEEEEECCSSSTT--------SCEEE-EECCCC-CCTTEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCEEEEEE
T ss_pred             eEEEEEeCCCcCC--------cceEe-eccCCC-CCCCeEEEEEeeeCCCcchHHHHcCCCC-CCCCCcCcccccccchh
Confidence            7899999988763        23333 455555 4999999999999999999999998765 34679999999999999


Q ss_pred             EeCCCC-CCCCCCCEEE-----------------------------------EecCCCcceeeEeeeCCCeeeCCCCCCH
Q 019049           81 AVGPNV-SNFKVGDTVC-----------------------------------GFAALGSFAQFIVADQSELFPVPKGCDL  124 (347)
Q Consensus        81 ~vG~~v-~~~~~Gd~V~-----------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~  124 (347)
                      ++|+++ +.+++||||.                                   |+..+|+|+||+++++++++++|+++++
T Consensus        76 ~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~  155 (192)
T d1piwa1          76 KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWV  155 (192)
T ss_dssp             EECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCE
T ss_pred             hcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCH
Confidence            999998 6699999994                                   1223589999999999999999999999


Q ss_pred             HHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049          125 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus       125 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      ++|+.+...+.|||+++ ..++++++++|+|..
T Consensus       156 e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         156 ETLPVGEAGVHEAFERM-EKGDVRYRFTLVGYD  187 (192)
T ss_dssp             EEEESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred             HHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence            88776655578999998 579999999999864

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=1.2e-26  Score=184.69  Aligned_cols=171  Identities=25%  Similarity=0.351  Sum_probs=147.9

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEe
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      ++++.|+.++|++.|||+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++++++|++.++++|+++++|
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN   79 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence            3567899999999999999989999999999999998 9999999999999999 5677888999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHhhhcceEEEEEEec
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      ++++++   .+++.+.+++ ++|++|||+|. ..++.++++++++|+++.+|.... ....++...++.+++++.|++.+
T Consensus        80 ~~~~~~---~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          80 SKTQDP---VAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TTTSCH---HHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CCCcCH---HHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            998887   6677777765 99999999998 567899999999999999997653 33357778889999999998765


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCc
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      ++.   +   +++++++++++++|+
T Consensus       156 ~~~---~---~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGS---P---KKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSC---H---HHHHHHHHHHHHTTS
T ss_pred             CCC---h---HHHHHHHHHHHHcCC
Confidence            532   1   467899999999885

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=3e-27  Score=188.86  Aligned_cols=141  Identities=17%  Similarity=0.318  Sum_probs=116.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-------CCCCCcccCC
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGS   73 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-------~~~~p~~~G~   73 (347)
                      |||++++++|+|           +.++|++.|+ |++|||+||+.++|+|++|++.++|.++.       ...+|+++||
T Consensus         1 MKA~~~~~~G~p-----------l~i~dv~~P~-p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~Gh   68 (177)
T d1jvba1           1 MRAVRLVEIGKP-----------LSLQEIGVPK-PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH   68 (177)
T ss_dssp             CEEEEECSTTSC-----------CEEEECCCCC-CCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCC
T ss_pred             CeEEEEEeCCCC-----------CEEEEeeCCC-CCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccc
Confidence            999999999987           5557999999 59999999999999999999999987532       2367999999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEe---------------------------cCCCcceeeEeeeCC-CeeeCCCCCCHH
Q 019049           74 DYSGTVDAVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQS-ELFPVPKGCDLL  125 (347)
Q Consensus        74 e~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~~-~~~~~p~~~~~~  125 (347)
                      |++|+|+++|+++++|++||||...                           ..+|+|+||+++++. .++++|+..+.+
T Consensus        69 E~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~  148 (177)
T d1jvba1          69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMI  148 (177)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCC
T ss_pred             eEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHH
Confidence            9999999999999999999999642                           234899999999765 456666655555


Q ss_pred             HHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049          126 AAAALPVAFGTSHVALVHRAQLSSGQVLLV  155 (347)
Q Consensus       126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI  155 (347)
                      .|+....++.++++++ +.+++ .|++|||
T Consensus       149 ~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         149 TKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            5555567899999998 56666 5889988

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=5.5e-27  Score=189.04  Aligned_cols=140  Identities=27%  Similarity=0.293  Sum_probs=119.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |+|+++.+.|++           +.++++|.|+ |+++||+||+.++++|++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         4 ~~Aav~~~~g~~-----------l~l~~v~~P~-p~~geVlVkv~a~gic~sD~~~~~G~~~--~~~P~i~GHE~~G~V~   69 (194)
T d1f8fa1           4 IIAAVTPCKGAD-----------FELQALKIRQ-PQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIE   69 (194)
T ss_dssp             EEEEEBCSTTCC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEE
T ss_pred             eEEEEEcCCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEEEecCchHhhhhhccc--ccCCcccccceEEEee
Confidence            789999999987           5667899999 6999999999999999999999998865  3689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCcceeeEeee
Q 019049           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (347)
                      ++|+++++|++||||+...                                                 ..|+|+||.+++
T Consensus        70 ~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~  149 (194)
T d1f8fa1          70 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  149 (194)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             ecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEe
Confidence            9999999999999995310                                                 016789999999


Q ss_pred             CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEE
Q 019049          112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV  180 (347)
Q Consensus       112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~  180 (347)
                      +.+++++|+++++++++                         ++.|+ |++|++++|+++.+|++.++.
T Consensus       150 ~~~~~~ip~~i~~~~~~-------------------------~i~g~-g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         150 ENNTVKVTKDFPFDQLV-------------------------KFYAF-DEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             GGGEEEECTTCCGGGGE-------------------------EEEEG-GGHHHHHHHHHHTSCSEEEEE
T ss_pred             hHHEEECCCCCCcccEE-------------------------EEeCc-HHHHHHHHHHHHHcCCCEEEE
Confidence            99999999998876543                         34455 999999999999999964443

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-27  Score=191.07  Aligned_cols=141  Identities=21%  Similarity=0.277  Sum_probs=117.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (347)
                      |.|++++.++.            +.++|+|.|+ |+++||+|||.++++|++|++.+.+...  ....+|.++|||++|+
T Consensus         8 ~~a~V~~gp~~------------l~l~evp~P~-p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~   74 (185)
T d1pl8a1           8 NLSLVVHGPGD------------LRLENYPIPE-PGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT   74 (185)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEE
T ss_pred             CEEEEEeCCCe------------EEEEEeECCC-CCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeee
Confidence            67888888775            3447899999 5999999999999999999999986532  1345789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccC
Q 019049           79 VDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAAL  130 (347)
Q Consensus        79 V~~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l  130 (347)
                      |+++|+++++|++||||+..                            ..+|+|+||++++.++++++|+++++++|+++
T Consensus        75 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~  154 (185)
T d1pl8a1          75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF  154 (185)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE
T ss_pred             EEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH
Confidence            99999999999999999642                            13478999999999999999999999998766


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019049          131 PVAFGTSHVALVHRAQLSSGQVLLVLGA  158 (347)
Q Consensus       131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~  158 (347)
                      +  +.++++++ +.+++++|++||| |+
T Consensus       155 p--l~~a~~a~-~~~~~~~G~~VlI-g~  178 (185)
T d1pl8a1         155 P--LEKALEAF-ETFKKGLGLKIML-KC  178 (185)
T ss_dssp             E--GGGHHHHH-HHHHTTCCSEEEE-EC
T ss_pred             H--HHHHHHHH-HHhCCCCCCEEEE-Ee
Confidence            4  44566666 5677899999998 44

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.9e-27  Score=180.34  Aligned_cols=128  Identities=23%  Similarity=0.286  Sum_probs=112.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|+++.         ..+++++.|+ |+++||+|||.|+|||++|++.+.|.++....+|+++|+|++|+|+
T Consensus         1 MkA~v~~~~~~~~~---------l~i~~v~~p~-~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~   70 (146)
T d1o89a1           1 LQALLLEQQDGKTL---------ASVQTLDESR-LPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVR   70 (146)
T ss_dssp             CEEEEEECC---CE---------EEEEECCGGG-SCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEE
T ss_pred             CeEEEEEcCCCceE---------EEEEEcCCCC-CCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccce
Confidence            99999999999854         5568999999 5999999999999999999999999988777889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHH
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVA  140 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~  140 (347)
                      ++|.  ..+++||+|+...      .+|+|+||+++++++++++|+++|+++||+++++..||+..
T Consensus        71 ~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1          71 TSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             EECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHH
T ss_pred             eecc--CCccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            9765  5799999998644      35999999999999999999999999999999888888644

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=3.4e-26  Score=183.77  Aligned_cols=170  Identities=22%  Similarity=0.304  Sum_probs=146.1

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +++.+|.+.|+..|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.++++|+++++++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~   80 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR   80 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEec
Confidence            456788888999999999988889999999999998 9999999999999998 89999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCC--CCcchhHhhhcceEEEEEEec
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      .+.+..+..+.+.+.+++.++|+||||+|++ .++.++++++++|+++++|......  +..++..++.|++++.|++.+
T Consensus        81 ~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          81 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             cccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            9888777777888899999999999999985 5789999999999999998654332  222334577899999998766


Q ss_pred             cccccCchhHHHHHHHHHHHHHcC
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKG  302 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g  302 (347)
                      +         .+.+++.+++++++
T Consensus       161 ~---------~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 D---------TSHFVKTVSITSRN  175 (182)
T ss_dssp             C---------HHHHHHHHHHHHTC
T ss_pred             C---------HHHHHHHHHHHHHC
Confidence            5         46677777777765

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=5e-26  Score=180.09  Aligned_cols=166  Identities=23%  Similarity=0.350  Sum_probs=140.8

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +|+++||.++++++|||+++ +.+++++|++|+|.|+ |++|++++|+++.+|++|++++++++|++.++++|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccc
Confidence            58999999999999999998 5689999999999998 999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  281 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (347)
                      .+.+.   .+.+.+.+. +..++++++.+...++.++++++++|+++.+|.+.... .++...++.|++++.|++.++  
T Consensus        79 ~~~~~---~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~~~i~Gs~~~~--  151 (166)
T d1llua2          79 RQEDP---VEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDF-PTPIFDVVLKGLHIAGSIVGT--  151 (166)
T ss_dssp             TTSCH---HHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEE-EEEHHHHHHTTCEEEECCSCC--
T ss_pred             cchhH---HHHHHHhhc-CCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCc-cCCHHHHHhCCcEEEEEeecC--
Confidence            98887   555555543 23444444445577899999999999999999766543 467778899999999987655  


Q ss_pred             ccCchhHHHHHHHHHHHHHcCc
Q 019049          282 IHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                             +++++++++++++|.
T Consensus       152 -------~~d~~e~l~l~~~Gl  166 (166)
T d1llua2         152 -------RADLQEALDFAGEGL  166 (166)
T ss_dssp             -------HHHHHHHHHHHHTTS
T ss_pred             -------HHHHHHHHHHHHCcC
Confidence                   467889999998873

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=2.5e-26  Score=182.37  Aligned_cols=169  Identities=21%  Similarity=0.230  Sum_probs=141.9

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEe
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      +|+++|++++++++|+|+++ +.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++++++|++.++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccc
Confidence            57999999999999999998 6799999999999998 9999999999999998 7999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCC-Ccch--hHhhhcceEEEEEE
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP-VIPA--NIALVKNWTVHGLY  276 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~--~~~~~~~~~~~~~~  276 (347)
                      ++++++   .+.+.+.+++.++|++|||+|+ ..+++++++++++|+++.+|.+..... ..+.  .....++.++.++.
T Consensus        79 ~~~~~~---~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          79 YKNGHI---EDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GGGSCH---HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             ccchhH---HHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            998887   7788899999999999999997 457999999999999999997654321 1111  12345677888776


Q ss_pred             eccccccCchhHHHHHHHHHHHHHcCc
Q 019049          277 WGSYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      ....        +..++++.+++..|+
T Consensus       156 ~~~~--------r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--------RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--------HHHHHHHHHHHHTTS
T ss_pred             CCCC--------cccHHHHHHHHHcCC
Confidence            5442        355677888888774

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-25  Score=178.42  Aligned_cols=169  Identities=18%  Similarity=0.287  Sum_probs=144.1

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEe
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      +|+++||.+ .++++||+++ +.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++++++|++.++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence            588998855 7899999998 6789999999999998 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      ..+.+..+ ..+....+.+.++|++|||+|++ .++.++++++++|+++++|.+.... .++...++.|++++.|++.+.
T Consensus        78 ~~~~~~~~-~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~-~~~~~~~~~k~l~i~Gs~~~~  155 (171)
T d1pl8a2          78 ISKESPQE-IARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMT-TVPLLHAAIREVDIKGVFRYC  155 (171)
T ss_dssp             CSSCCHHH-HHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCC-CCCHHHHHHTTCEEEECCSCS
T ss_pred             cccccccc-ccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCC-ccCHHHHHHCCcEEEEEeCCH
Confidence            88877633 33444455677999999999985 5789999999999999999876543 477888899999999975321


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCcee
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGLIT  305 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~l~  305 (347)
                                +.++++++++++|+++
T Consensus       156 ----------~~~~~al~li~~gkid  171 (171)
T d1pl8a2         156 ----------NTWPVAISMLASKSVN  171 (171)
T ss_dssp             ----------SCHHHHHHHHHTTSCC
T ss_pred             ----------hHHHHHHHHHHcCCCC
Confidence                      3467889999999874

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=2.2e-25  Score=177.18  Aligned_cols=165  Identities=31%  Similarity=0.422  Sum_probs=144.6

Q ss_pred             CHHHHccCcchHHHHHHHHHHhc-CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEe
Q 019049          123 DLLAAAALPVAFGTSHVALVHRA-QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~-~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      .+.++|+++++++|||+++.+.. .++||++|+|+|+ |++|++++|+++.+|+ +|++++++++|++.++++|++++++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~   83 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD   83 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeec
Confidence            36789999999999999997665 4899999999998 9999999999999997 7888999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      ++++.    .+...+.+.+.++|++|||+|+. .++.++++++++|+++.+|... + ..++...++.+++++.|++.++
T Consensus        84 ~~~~~----~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~-~~~~~~~l~~k~~~i~Gs~~~~  157 (172)
T d1h2ba2          84 ARRDP----VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-E-LRFPTIRVISSEVSFEGSLVGN  157 (172)
T ss_dssp             TTSCH----HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-C-CCCCHHHHHHTTCEEEECCSCC
T ss_pred             CcccH----HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-c-ccCCHHHHHhCCcEEEEEEecC
Confidence            87643    57778888999999999999985 6899999999999999999643 2 3567788899999999998766


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCc
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                               .++++++++++.+|+
T Consensus       158 ---------~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 ---------YVELHELVTLALQGK  172 (172)
T ss_dssp             ---------HHHHHHHHHHHHTTS
T ss_pred             ---------HHHHHHHHHHHHcCC
Confidence                     477899999999885

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=1.8e-25  Score=177.18  Aligned_cols=169  Identities=24%  Similarity=0.363  Sum_probs=141.5

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++..|+ +|++++.+++|++.++++|+++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence            578999999999999999988999999999999998 9999999999999999 79999999999999999999999987


Q ss_pred             CCCC-chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchhHhhhcceEEEEEEec
Q 019049          202 SNES-VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       202 ~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      ...+ .   .....+.+.+.++|++|||+|. ..++.++++++++ |+++.+|.+..+.. ++...++. +.++.|++.+
T Consensus        81 ~~~~~~---~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~-i~~~~~~~-~k~i~Gs~~G  155 (174)
T d1e3ia2          81 RELDKP---VQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMT-IPTVDVIL-GRSINGTFFG  155 (174)
T ss_dssp             GGCSSC---HHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEE-EEHHHHHT-TCEEEECSGG
T ss_pred             ccchhh---hhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccc-cchHHHhc-cCEEEEEEee
Confidence            6533 4   5667777788899999999998 5678999999996 99999998765433 44444333 5678888766


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCc
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      ++.   +   .+++.++++++++|+
T Consensus       156 s~~---~---~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GWK---S---VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GCC---H---HHHHHHHHHHHHTTS
T ss_pred             CCC---h---HHHHHHHHHHHHCcC
Confidence            542   1   477888999888875

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=2.1e-26  Score=183.38  Aligned_cols=137  Identities=18%  Similarity=0.269  Sum_probs=115.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|+|           +.+++++.|+ |+++||+|||.++|||++|++.++|..+. .++|+++|||++|+|+
T Consensus         5 ~kA~v~~~~~~p-----------l~i~ev~~P~-~~~~evlVkv~a~gIC~sD~~~~~G~~~~-~~~P~vlGHE~~G~V~   71 (184)
T d1vj0a1           5 AHAMVLEKFNQP-----------LVYKEFEISD-IPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAGRVV   71 (184)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEE
T ss_pred             EEEEEEecCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEECCCCCchhheeccCCc-cccccccceeeeeeee
Confidence            799999999987           5567899999 59999999999999999999999987653 3689999999999999


Q ss_pred             EeCCCCCC-----CCCCCEEEEe------------------------------------cCCCcceeeEeee-CCCeeeC
Q 019049           81 AVGPNVSN-----FKVGDTVCGF------------------------------------AALGSFAQFIVAD-QSELFPV  118 (347)
Q Consensus        81 ~vG~~v~~-----~~~Gd~V~~~------------------------------------~~~g~~~~~~~~~-~~~~~~~  118 (347)
                      ++|+++++     +++||+|...                                    ..+|+|+||++++ +.+++++
T Consensus        72 ~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~i  151 (184)
T d1vj0a1          72 EVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKV  151 (184)
T ss_dssp             EESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEE
T ss_pred             EEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEEC
Confidence            99999864     5799999531                                    0158999999996 5789999


Q ss_pred             CCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049          119 PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus       119 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      |+++++++      ++.+|++++ ..+++++|++|||+.
T Consensus       152 p~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         152 SEKITHRL------PLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             CTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             CCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEee
Confidence            99998653      345677787 678999999999974

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.93  E-value=1.7e-25  Score=177.63  Aligned_cols=169  Identities=24%  Similarity=0.329  Sum_probs=137.9

Q ss_pred             HHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCC
Q 019049          124 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLS  202 (347)
Q Consensus       124 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~  202 (347)
                      +.+||++.|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++++++|++.++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            45799999999999999988899999999999998 9999999999999998 899999999999999999999999977


Q ss_pred             CCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhcccc-CCEEEEEeecCCCCCCcchh-HhhhcceEEEEEEecc
Q 019049          203 NESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNW-GAQILVIGFASGEIPVIPAN-IALVKNWTVHGLYWGS  279 (347)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  279 (347)
                      +.+..  ..+..+.+.++++|++||++|. +.+..++..+++ +|+++.+|...... .++.. ..+.++.++.|+++++
T Consensus        81 ~~d~~--~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~-~~~~~~~~~~~~~~i~Gs~~G~  157 (174)
T d1p0fa2          81 DYDKP--IYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE-RLPLDPLLLLTGRSLKGSVFGG  157 (174)
T ss_dssp             GCSSC--HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTC-CEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhH--HHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCcc-ccccCHHHHhCCCEEEEEEeCC
Confidence            64421  5566677777899999999998 456777777766 59999999765443 23332 3455678999987665


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCc
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      +.       .++++++++++.+|+
T Consensus       158 ~~-------~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         158 FK-------GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CC-------GGGHHHHHHHHHTTS
T ss_pred             CC-------HHHHHHHHHHHHcCC
Confidence            32       246788888888875

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=2.1e-28  Score=192.30  Aligned_cols=148  Identities=22%  Similarity=0.225  Sum_probs=129.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|+...         +.+++++.|++ ++|||+|||+|+|+|++|++.+.|.++..+..|.++|+|++|+|+
T Consensus         4 ~ka~~~~~~g~~~~---------l~~~~v~~p~l-~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~   73 (162)
T d1tt7a1           4 FQALQAEKNADDVS---------VHVKTISTEDL-PKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVV   73 (162)
T ss_dssp             EEEEEECCGGGSCC---------CEEEEEESSSS-CSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEE
T ss_pred             EEEEEEEecCCCeE---------EEEEEcCCCCC-CCCEEEEEEEEecccchhhheeeecccccccceeeeeeecccccc
Confidence            89999999998754         55679999995 899999999999999999999999887666788999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  154 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl  154 (347)
                      +  +.++++++||+|+...      .+|+|+||++++++.++++|+++|+++||+++..++|||.++. ......+++||
T Consensus        74 ~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vl  150 (162)
T d1tt7a1          74 S--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDIL  150 (162)
T ss_dssp             E--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTT
T ss_pred             c--ccccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEE
Confidence            8  5678899999998754      3599999999999999999999999999999999999997652 33445567899


Q ss_pred             EecCCch
Q 019049          155 VLGAAGG  161 (347)
Q Consensus       155 I~g~~g~  161 (347)
                      |+|++|+
T Consensus       151 i~ga~G~  157 (162)
T d1tt7a1         151 QNRIQGR  157 (162)
T ss_dssp             TTCCSSE
T ss_pred             EECCcce
Confidence            9998775

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.9e-25  Score=177.22  Aligned_cols=168  Identities=26%  Similarity=0.339  Sum_probs=143.7

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +|+++||+++++++|||+++ ..+++++|++|+|+|+ |++|++++|+++..|++|++++.+++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            68999999999999999998 5788999999999987 999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  281 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (347)
                      .+.++   .+.+.+.+. +..|+++++.+...+..++++++++|+++.+|.+.... .++...++.+++++.|+..++  
T Consensus        79 ~~~~~---~~~~~~~~~-~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~-~~~~~~~~~~~~~i~gs~~~~--  151 (168)
T d1rjwa2          79 LKEDA---AKFMKEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEM-PIPIFDTVLNGIKIIGSIVGT--  151 (168)
T ss_dssp             TTSCH---HHHHHHHHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEE-EEEHHHHHHTTCEEEECCSCC--
T ss_pred             ccchh---hhhcccccC-CCceEEeecCCHHHHHHHHHHhccCCceEecccccCCC-CCCHHHHHHCCcEEEEEeeCC--
Confidence            98887   555555554 34455555555567899999999999999999776544 467777899999999987654  


Q ss_pred             ccCchhHHHHHHHHHHHHHcCcee
Q 019049          282 IHRPHVLEDSLRELLLWAAKGLIT  305 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~l~~g~l~  305 (347)
                             +++++++++++++|+++
T Consensus       152 -------~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 -------RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             -------HHHHHHHHHHHHTTSCC
T ss_pred             -------HHHHHHHHHHHHhCCCC
Confidence                   57899999999999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.4e-25  Score=177.61  Aligned_cols=165  Identities=24%  Similarity=0.287  Sum_probs=137.6

Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEe
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      +.+++++|.+.|+..|+|+++ +.+++++|++|+|+|+ |++|++++|+++.+|+++++++.+++|+++++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEE
Confidence            456788999999999999999 5799999999999998 99999999999999999999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      +.+...        .....+++|++|||+|.+ .+..++++++++|+++.+|...+....++...++.+++++.|++.++
T Consensus        81 ~~~~~~--------~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          81 SRNADE--------MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TTCHHH--------HHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred             CchhhH--------HHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence            876432        123456899999999974 68999999999999999998766555567777889999999988665


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCce
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGLI  304 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~l  304 (347)
                               .++++++++++.+++|
T Consensus       153 ---------~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---------IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---------HHHHHHHHHHHHHHTC
T ss_pred             ---------HHHHHHHHHHHHHcCC
Confidence                     5778888888887654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=7e-25  Score=174.15  Aligned_cols=168  Identities=21%  Similarity=0.301  Sum_probs=137.9

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      +|+++||.+ .++++||+++ +.+++++|++|+|+|+ |++|++++|+++.+|++|++++++++|++.++++|++.+++.
T Consensus         1 VS~e~Aal~-ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence            588998865 7899999998 6789999999999986 999999999999999999999999999999999999988776


Q ss_pred             CCCCc-hhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          202 SNESV-IPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       202 ~~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      +.... .....+....+.+.++|++|||+|++ .++.++++++++|+++.+|.+.... .++...++.|++++.|++.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~-~~~~~~~~~k~i~i~gs~~~~  156 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMV-TVPLVNACAREIDIKSVFRYC  156 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCC-CCCHHHHHTTTCEEEECCSCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCC-CcCHHHHHHCCCEEEEEECCH
Confidence            54332 22233344445578999999999985 5799999999999999999776543 467788999999999975322


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCc
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                                +++++.++++++|+
T Consensus       157 ----------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         157 ----------NDYPIALEMVASGR  170 (170)
T ss_dssp             ----------SCHHHHHHHHHTTS
T ss_pred             ----------HHHHHHHHHHHcCC
Confidence                      34677888888875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=2e-25  Score=176.67  Aligned_cols=164  Identities=20%  Similarity=0.179  Sum_probs=139.8

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS  202 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~  202 (347)
                      +.+.||.+.|++.|+|+++ ..+++++|++|+|+|+ |++|++++|+++.+|++|++++++++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeecc
Confidence            4577899999999999999 4689999999999998 9999999999999999999999999999999999999999877


Q ss_pred             CCCchhhHHHHHHHhcCCcccEEEeCCCcc---chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          203 NESVIPSVKEFLKARKLKGVDVLYDPVGGK---LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      +...   ..   +. ...++|.++||++..   .+..++++++++|+++.+|.+.... .++...++.|++++.|+..++
T Consensus        80 ~~~~---~~---~~-~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          80 EEGD---WG---EK-YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHE-MLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             GTSC---HH---HH-SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSC-CEEECGGGCBSCEEEECCCCC
T ss_pred             chHH---HH---Hh-hhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccc-cccHHHHHhCCcEEEEEeeCC
Confidence            5533   11   11 235899999998863   4788999999999999999766543 466777889999999988766


Q ss_pred             ccccCchhHHHHHHHHHHHHHcCcee
Q 019049          280 YKIHRPHVLEDSLRELLLWAAKGLIT  305 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~~g~l~  305 (347)
                               +++++++++++++|+++
T Consensus       152 ---------~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 ---------IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             ---------HHHHHHHHHHHHHTTCC
T ss_pred             ---------HHHHHHHHHHHHhCCCC
Confidence                     57889999999999875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.93  E-value=9.5e-25  Score=174.47  Aligned_cols=171  Identities=25%  Similarity=0.300  Sum_probs=140.7

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++||.++|++.|+|+++.+.++++||++|+|+|+ |++|++++|+++.+|+ +|++++++++|+++++++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            578999999999999999988899999999999999 8999999999999997 78899999999999999999999988


Q ss_pred             CCC-CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCC-CCCCcchhHhhhcceEEEEEEec
Q 019049          202 SNE-SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       202 ~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      .+. +.   .....+.+.+.++|++||++|.+ .++.+..+++++|+++.++.... .....+....+.++.++.|+.++
T Consensus        81 ~~~~~~---~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G  157 (176)
T d2fzwa2          81 QDFSKP---IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG  157 (176)
T ss_dssp             GGCSSC---HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             CchhhH---HHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeee
Confidence            653 34   55666667778999999999984 45788999999988887754432 22333334456788899998766


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCc
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      ++.      ..+++.++++++++|+
T Consensus       158 ~~~------~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         158 GWK------SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             GCC------HHHHHHHHHHHHHTTS
T ss_pred             CCc------HHHHHHHHHHHHHcCC
Confidence            542      1477889999999885

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=7.3e-29  Score=200.93  Aligned_cols=155  Identities=19%  Similarity=0.248  Sum_probs=126.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCC------CCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQL------NSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD   74 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e   74 (347)
                      +||++++.++..            .++|+|.|++      |+++||+||+.+++||++|++.+.|.++  ..+|+++|||
T Consensus         2 ~kA~v~~~~~~l------------e~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~--~~~P~v~GHE   67 (201)
T d1kola1           2 NRGVVYLGSGKV------------EVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHE   67 (201)
T ss_dssp             EEEEEEEETTEE------------EEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCC
T ss_pred             cEEEEEeCCCce------------EEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc--cccceeccce
Confidence            689999999864            3367888764      3569999999999999999999998775  3679999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEe-------------------------------------cCCCcceeeEeeeC--CCe
Q 019049           75 YSGTVDAVGPNVSNFKVGDTVCGF-------------------------------------AALGSFAQFIVADQ--SEL  115 (347)
Q Consensus        75 ~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~--~~~  115 (347)
                      ++|+|+++|++|++|++||||...                                     ..+|+|+||++++.  .++
T Consensus        68 ~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          68 ITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHC
T ss_pred             eeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeE
Confidence            999999999999999999999511                                     12489999999986  369


Q ss_pred             eeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 019049          116 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA  175 (347)
Q Consensus       116 ~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~  175 (347)
                      +++|++.+..+++++..++.++++++ ..++.+.+    ++|+ |++|++++|.||.+||
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHH-TCSCEEEECTTCSSCC
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEee-CHHHHHHHHHHHHcCC
Confidence            99999877777777777777777765 33444334    3577 9999999999999886

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=3.1e-28  Score=193.19  Aligned_cols=140  Identities=19%  Similarity=0.173  Sum_probs=110.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++.++|+.+            ++|+|.|+ |+++||+||+.++|||++|++.+.+... ...+|+++|||++|+|+
T Consensus         1 MKa~v~~~~~~l~------------i~e~p~P~-~~~~eVlIkv~a~gic~sD~~~~~~~~~-~~~~P~i~GhE~~G~V~   66 (177)
T d1jqba1           1 MKGFAMLGINKLG------------WIEKERPV-AGSYDAIVRPLAVSPCTSDIHTVFEGAL-GDRKNMILGHEAVGEVV   66 (177)
T ss_dssp             CEEEEEEETTEEE------------EEECCCCC-CCTTCEEEEEEEECCCHHHHHHHHHCTT-CCCSSEECCCCEEEEEE
T ss_pred             CeEEEEEeCCCeE------------EEEeeCCC-CCCCEEEEEEEEEecCCCcccccccCCC-CCCCCccCcceeeEEee
Confidence            9999999999743            36899999 5999999999999999999988866543 23679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe------------------------------cCCCcceeeEeeeC--CCeeeCCCCCCHHHHc
Q 019049           81 AVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQ--SELFPVPKGCDLLAAA  128 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~--~~~~~~p~~~~~~~aa  128 (347)
                      ++|+++++|++||||...                              ..+|+|+||++++.  .+++++|+++++++++
T Consensus        67 ~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~  146 (177)
T d1jqba1          67 EVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLV  146 (177)
T ss_dssp             EECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGE
T ss_pred             ecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHH
Confidence            999999999999999521                              13589999999986  4689999999998877


Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Q 019049          129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAA  166 (347)
Q Consensus       129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~  166 (347)
                      ........   .+        ++.++|.|+ |++|+++
T Consensus       147 ~~~~~~~~---~~--------~~~vlv~g~-gp~gl~a  172 (177)
T d1jqba1         147 THVYHGFD---HI--------EEALLLMKD-KPKDLIK  172 (177)
T ss_dssp             EEEEESGG---GH--------HHHHHHHHH-CCTTCSE
T ss_pred             HHHHHHHH---Hh--------cCceEEECC-CHHHhhe
Confidence            65443221   11        223666666 6666543

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=9.1e-26  Score=183.20  Aligned_cols=140  Identities=20%  Similarity=0.316  Sum_probs=116.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||+++++++++           +.++|++.|+ |+++||+|||.++|||++|++.+.|.++.  ++|.++|||++|+|+
T Consensus         9 ~KAavl~~~~~~-----------l~i~ev~~P~-p~~~eVlVkV~a~giC~sDl~~~~G~~~~--~~P~i~GHE~~G~Vv   74 (198)
T d2jhfa1           9 CKAAVLWEEKKP-----------FSIEEVEVAP-PKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVE   74 (198)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEE
T ss_pred             EEEEEEecCCCC-----------CEEEEEECCC-CCCCEEEEEEEEEecccccceeecCCccc--ccceecccceeEEEE
Confidence            899999999987           5568999999 69999999999999999999999998764  579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|++++++++||||+...                                                ..|+|+||+++++
T Consensus        75 ~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~  154 (198)
T d2jhfa1          75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE  154 (198)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEG
T ss_pred             ecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCH
Confidence            9999999999999995310                                                1278999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  157 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g  157 (347)
                      .+++++|+.++++.++....++.+...+   ...+++|++|+|..
T Consensus       155 ~~~~~~p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         155 ISVAKIDAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTIL  196 (198)
T ss_dssp             GGEEECCTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEEE
T ss_pred             HHeEECCCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEEE
Confidence            9999999999988776655554443322   23357889888763

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.92  E-value=3.9e-24  Score=170.61  Aligned_cols=172  Identities=25%  Similarity=0.270  Sum_probs=141.2

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++++++..|+ +|++++++++|++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            578999999999999999988899999999999998 9999999999999988 79999999999999999999999998


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  280 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (347)
                      .+.+..  .++..+.+.+.++|+++|++|. ..+..++.+++++|.++.++...+.....+....+.++.++.|++.+++
T Consensus        81 ~~~~~~--~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          81 NDHSEP--ISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GGCSSC--HHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             CCcchh--HHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            765431  5677778888899999999998 4567888888877655554433333334455566778899999876664


Q ss_pred             cccCchhHHHHHHHHHHHHHcCc
Q 019049          281 KIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      .      .++++.++++++.+|+
T Consensus       159 ~------~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 K------GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             C------HHHHHHHHHHHHHTTS
T ss_pred             c------HHHHHHHHHHHHHcCC
Confidence            2      1578889999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=2.7e-24  Score=170.83  Aligned_cols=169  Identities=19%  Similarity=0.259  Sum_probs=136.9

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+ +|++++.+++|++.++++|+++++|+
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            589999999999999999988899999999999998 9999999999999996 89999999999999999999999998


Q ss_pred             CCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhcccc-CCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc
Q 019049          202 SNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNW-GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  279 (347)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (347)
                      ++.+..  .+.+.+.+.+.++|++||++|.. .+..++..+.+ +|+++.+|.+............+.++.++.|++.++
T Consensus        82 ~~~~~~--~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          82 KDSTKP--ISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG  159 (176)
T ss_dssp             GGCSSC--HHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             cccchH--HHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeC
Confidence            765532  45666778889999999999985 56777766655 499999997765443222233455678999987665


Q ss_pred             ccccCchhHHHHHHHHHHHHH
Q 019049          280 YKIHRPHVLEDSLRELLLWAA  300 (347)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~l~  300 (347)
                      ...      .+++.++++++.
T Consensus       160 ~~~------~~dip~li~~~~  174 (176)
T d1d1ta2         160 LKS------RDDVPKLVTEFL  174 (176)
T ss_dssp             CCH------HHHHHHHHHHHT
T ss_pred             CCc------HHHHHHHHHHHh
Confidence            321      466777776654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.2e-25  Score=176.63  Aligned_cols=170  Identities=21%  Similarity=0.232  Sum_probs=138.0

Q ss_pred             CCHHHHccCcchHHHHHHHHHH---hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE
Q 019049          122 CDLLAAAALPVAFGTSHVALVH---RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV  198 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~---~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v  198 (347)
                      +|+.+||+++++..|||++++.   .....++++|||+|++|++|.+++|+||.+|++|+++++++++.+.++++|++++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v   80 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV   80 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc
Confidence            5899999999999999987642   3334455699999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEec
Q 019049          199 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      +|+++.++.+.       .....+|.++|++|++.+...+.+++++|+++.+|..++.....+...++.|++++.|++..
T Consensus        81 i~~~~~~~~~~-------l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~  153 (177)
T d1o89a2          81 LPRDEFAESRP-------LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSV  153 (177)
T ss_dssp             EEGGGSSSCCS-------SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSS
T ss_pred             cccccHHHHHH-------HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecc
Confidence            99887665211       23456799999999999999999999999999999887766667778889999999997543


Q ss_pred             cccccCchhHHHHHHHHHHHHHc
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAK  301 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~  301 (347)
                         ...++...+.++++.+.+.+
T Consensus       154 ---~~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         154 ---MTPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             ---SCCHHHHHHHHHHHHHHSCH
T ss_pred             ---cCCHHHHHHHHHHHHHhccc
Confidence               23344444555565554443

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1e-24  Score=173.18  Aligned_cols=131  Identities=18%  Similarity=0.245  Sum_probs=109.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++...+++|           +.++|++.|+ |++|||+|||.++|||++|++.+.|..+. ..+|+++|||++|+|+
T Consensus         1 m~a~~~~~~~~p-----------l~i~ev~~P~-pg~geVlVkv~a~gic~sDl~~~~g~~~~-~~~P~i~GhE~~G~V~   67 (179)
T d1uufa1           1 IKAVGAYSAKQP-----------LEPMDITRRE-PGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVV   67 (179)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEE
T ss_pred             CeEEEEccCCCC-----------CEEEEecCCC-CCCCEEEEEEEEECCCCCcceeeeeeecc-ccccccccccccccch
Confidence            999999999988           6678999999 69999999999999999999999997653 4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe------------------------------------cCCCcceeeEeeeCCCeeeCCCCCCH
Q 019049           81 AVGPNVSNFKVGDTVCGF------------------------------------AALGSFAQFIVADQSELFPVPKGCDL  124 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~  124 (347)
                      ++|++|+++++||+|...                                    ..+|+|+||+++++++++++|+....
T Consensus        68 ~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~  147 (179)
T d1uufa1          68 AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIE  147 (179)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEE
T ss_pred             hhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcC
Confidence            999999999999999411                                    01378999999999999999966422


Q ss_pred             HHHccCcchHHHHHHHHHHhcCCC
Q 019049          125 LAAAALPVAFGTSHVALVHRAQLS  148 (347)
Q Consensus       125 ~~aa~l~~~~~~a~~~l~~~~~~~  148 (347)
                      .   .+..++.++++++ ..+.++
T Consensus       148 ~---~~a~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         148 M---IRADQINEAYERM-LRGDVK  167 (179)
T ss_dssp             E---ECGGGHHHHHHHH-HTTCSS
T ss_pred             h---hHhchhHHHHHHH-HHhCcc
Confidence            2   2335678888887 445543

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=8.6e-26  Score=182.72  Aligned_cols=139  Identities=17%  Similarity=0.259  Sum_probs=116.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (347)
                      |||++++++|++           +.++|+|.|+ |+++||+|||.++|+|++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         9 ~KAav~~~~g~~-----------l~i~ev~~P~-p~~~eVlVkv~a~gICgsDlh~~~G~~~--~~~P~i~GHE~~G~Vv   74 (198)
T d1p0fa1           9 CKAAVAWEPHKP-----------LSLETITVAP-PKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVE   74 (198)
T ss_dssp             EEEEEBSSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEE
T ss_pred             EEEEEEccCCCC-----------CEEEEEECCC-CCCCEEEEEEEEEEEecccceeeeeccc--cccccccceeeeeeee
Confidence            899999999987           5668999999 5999999999999999999999998875  3689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (347)
Q Consensus        81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (347)
                      ++|+++.++++||||+...                                                ..|+|+||+++++
T Consensus        75 ~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~  154 (198)
T d1p0fa1          75 SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD  154 (198)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred             ecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecH
Confidence            9999999999999995210                                                1268999999999


Q ss_pred             CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHH
Q 019049          113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV  164 (347)
Q Consensus       113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~  164 (347)
                      ..++++|++++++.++...+.+.+.          .++++|||.|+ |++|+
T Consensus       155 ~~~~kip~~~~~~~~~~~~~~~~~v----------~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         155 IAVAKIDPKINVNFLVSTKLTLDQI----------NKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             TSEEEECTTSCGGGGEEEEECGGGH----------HHHHHHTTTSS-CSEEE
T ss_pred             HHEEECCCCCCHHHHHHhhcchhhc----------CCCCEEEEECC-CcceE
Confidence            9999999999988776655443332          23345778887 77765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.92  E-value=6e-24  Score=169.56  Aligned_cols=171  Identities=23%  Similarity=0.272  Sum_probs=140.9

Q ss_pred             CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049          123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  201 (347)
Q Consensus       123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~  201 (347)
                      ++++||.++|+++|+|+++.+.+++++|++|+|+|+ |++|++++++++..|+ +|++++++++|+++++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            578999999999999999988999999999999999 8999999999999986 99999999999999999999999987


Q ss_pred             CCC-CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeec-CCCCCCcchhHhhhcceEEEEEEec
Q 019049          202 SNE-SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFA-SGEIPVIPANIALVKNWTVHGLYWG  278 (347)
Q Consensus       202 ~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~  278 (347)
                      .+. +.   ..+..+.+.++++|++||++|.+ .++.++.+++++|..+.++.. ......+....++.+++++.|++.+
T Consensus        81 ~~~~~~---~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G  157 (176)
T d2jhfa2          81 QDYKKP---IQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFG  157 (176)
T ss_dssp             GGCSSC---HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             CCchhH---HHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEe
Confidence            543 44   66777788888999999999985 557888999888655555444 3333333434567799999998766


Q ss_pred             cccccCchhHHHHHHHHHHHHHcCc
Q 019049          279 SYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      ++.      .++++.++++++.+|+
T Consensus       158 ~~~------~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         158 GFK------SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             GCC------HHHHHHHHHHHHHTTS
T ss_pred             CCC------HHHHHHHHHHHHHCcC
Confidence            532      1477888999998875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=2e-24  Score=173.72  Aligned_cols=173  Identities=28%  Similarity=0.419  Sum_probs=133.6

Q ss_pred             CCHHHHccCcchHHHHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHH-HHhcCCcE
Q 019049          122 CDLLAAAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKF-LKSLGVDH  197 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~--~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~-~~~~g~~~  197 (347)
                      +|+.+.| ++++++|||++++..+++++|  ++|||+||+|++|++++|+|+.+|++ |++++.++++... .+++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            4556654 778999999999999999987  89999999999999999999999995 6666767665554 46899999


Q ss_pred             EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCC------CCc---chhHhhhc
Q 019049          198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI------PVI---PANIALVK  268 (347)
Q Consensus       198 v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~---~~~~~~~~  268 (347)
                      ++|+.++++   .+.+.+.+ +.++|++||++|++.++.++++++++|+++.+|..++..      ...   ....+..|
T Consensus        81 vi~~~~~~~---~~~~~~~~-~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k  156 (187)
T d1vj1a2          81 AVNYKTGNV---AEQLREAC-PGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKER  156 (187)
T ss_dssp             EEETTSSCH---HHHHHHHC-TTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHT
T ss_pred             EeeccchhH---HHHHHHHh-ccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhc
Confidence            999999887   55555555 579999999999999999999999999999998654311      111   12235678


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCc
Q 019049          269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                      ++++.++...++.    +...+.++++.+++.+|+
T Consensus       157 ~i~~~g~~~~~~~----~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         157 NITRERFTVLNYK----DKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TCEEEECCGGGCG----GGHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEeEecchH----HHHHHHHHHHHHHHHCcC
Confidence            9999987655433    334578899999999885

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=3.2e-27  Score=188.83  Aligned_cols=159  Identities=19%  Similarity=0.164  Sum_probs=128.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC---------CCCCccc
Q 019049            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---------PPLPFVP   71 (347)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~---------~~~p~~~   71 (347)
                      |||++++++|+|..++      .+...++|.|+ |+++||+|||.++++|++|++.++|.++..         ...|.++
T Consensus         4 ~kA~v~~~~G~p~~~l------~l~~~~~p~p~-~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~   76 (175)
T d1gu7a1           4 AQAVLYTQHGEPKDVL------FTQSFEIDDDN-LAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC   76 (175)
T ss_dssp             EEEEEESSCSCHHHHC------EEEEEEECTTS-CCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred             eEEEEEccCCCccccc------EEEEEECCCCC-CCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccc
Confidence            7999999999873210      12234788888 599999999999999999999999876432         1457889


Q ss_pred             CCceeEEEEEeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHH-hcCCCC
Q 019049           72 GSDYSGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH-RAQLSS  149 (347)
Q Consensus        72 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~-~~~~~~  149 (347)
                      |+|++|+|++.|.++..++.||+|+... ..|+|+||++++++.++++|++++.+.+  ++...+|||+++.. .+++++
T Consensus        77 G~e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~  154 (175)
T d1gu7a1          77 GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKP  154 (175)
T ss_dssp             CSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSC
T ss_pred             ccccccccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999998654 3589999999999999999998754444  44566788877643 467999


Q ss_pred             CCEEEEec-CCchHHHHHHH
Q 019049          150 GQVLLVLG-AAGGVGVAAVQ  168 (347)
Q Consensus       150 ~~~VlI~g-~~g~~G~~~~~  168 (347)
                      |++|||+| |+|++|.+++|
T Consensus       155 g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         155 LHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHHHHHHTGGGSCEEEE
T ss_pred             CCEEEEECccchhhhheEEe
Confidence            99999998 55779987765

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=6.5e-23  Score=165.37  Aligned_cols=165  Identities=19%  Similarity=0.163  Sum_probs=136.3

Q ss_pred             HHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCC
Q 019049          125 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSN  203 (347)
Q Consensus       125 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~  203 (347)
                      ++.++++..++|||+++ +.+++++|++|||+|+ |++|++++++++..|+ +|++++.+++|++.++++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC
Confidence            57788899999999998 6799999999999998 9999999999999998 8999999999999999999999999988


Q ss_pred             CCchhhHHHHHHHhcCCcccEEEeCCCcc----------------chHHHHhccccCCEEEEEeecCCCCC---------
Q 019049          204 ESVIPSVKEFLKARKLKGVDVLYDPVGGK----------------LTKESLKLLNWGAQILVIGFASGEIP---------  258 (347)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~~~~~~~---------  258 (347)
                      .++   .+.+.+.|++.++|++|||+|.+                .++.++++++++|+++.+|.+....+         
T Consensus        80 ~~~---~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 TPL---HEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             SCH---HHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHT
T ss_pred             cCH---HHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhc
Confidence            888   77888889999999999999843                57889999999999999997543221         


Q ss_pred             ---CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCc
Q 019049          259 ---VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL  303 (347)
Q Consensus       259 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  303 (347)
                         .+++..++.|++++.+-..         ..+..++++++++.+++
T Consensus       157 ~~~~~~~~~~~~k~~~i~~g~~---------~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHTGQT---------PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEESSC---------CHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceeccCCC---------chHHHHHHHHHHHHcCC
Confidence               2344456778887654111         11355677888877664

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=8.5e-24  Score=165.74  Aligned_cols=140  Identities=26%  Similarity=0.304  Sum_probs=118.3

Q ss_pred             hHHHHHHH---HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049          133 AFGTSHVA---LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  209 (347)
Q Consensus       133 ~~~~a~~~---l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  209 (347)
                      +..|||.+   |.+.....++++|||+|++|++|.+++|+|+.+|++|++++++++|.++++++|+++++++++...   
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~---   80 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYD---   80 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCS---
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhc---
Confidence            45667654   444555667889999999999999999999999999999999999999999999999998653221   


Q ss_pred             HHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEe
Q 019049          210 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYW  277 (347)
Q Consensus       210 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (347)
                        +....+.+.++|+++|++|++.+..++++++++|+++.+|...+.....+...++.|++++.|+..
T Consensus        81 --~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          81 --GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             --SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred             --hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEec
Confidence              223345678999999999999999999999999999999988877666788889999999999653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=2.3e-16  Score=104.64  Aligned_cols=74  Identities=28%  Similarity=0.348  Sum_probs=68.0

Q ss_pred             CCHHHHccCcchHHHHHHHHH---HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC
Q 019049          122 CDLLAAAALPVAFGTSHVALV---HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV  195 (347)
Q Consensus       122 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~  195 (347)
                      +|++||++++.++.|||++++   +....+++++|||+|++|++|.+++|+++.+|++|+++++++++.++++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            589999999999999998875   34556899999999999999999999999999999999999999999999985

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.62  E-value=5.9e-15  Score=111.74  Aligned_cols=134  Identities=15%  Similarity=0.095  Sum_probs=95.9

Q ss_pred             ceEEeccc--CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049            2 EALVCRKL--GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (347)
Q Consensus         2 ~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (347)
                      |+|++.++  |.|.      ++.|.+ ++.+.|+ |++|||+||+.|.++++........     ....-.+..+.+|+|
T Consensus         5 k~~vl~~~P~G~P~------~~~f~l-~e~~ip~-~~~gevLvk~~~~svDp~~R~~~~~-----~~~g~~~~g~~vg~V   71 (147)
T d1v3va1           5 KSWTLKKHFQGKPT------QSDFEL-KTVELPP-LKNGEVLLEALFLSVDPYMRIASKR-----LKEGAVMMGQQVARV   71 (147)
T ss_dssp             EEEEESSCCCSSCC------GGGEEE-EEEECCC-CCTTCEEEEEEEEECCTHHHHHGGG-----SCTTSBCCCCEEEEE
T ss_pred             EEEEEccCCCCCCc------ccceEE-EEEECCC-CCCCEEEEEEEEEeEcccccccccc-----cccCCccccceEEEE
Confidence            56777765  4432      133444 5789999 5999999999999999875543322     122224555788999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHH-----HHccCcchHHH-HHHHHHHhcCCCCCCEE
Q 019049           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLL-----AAAALPVAFGT-SHVALVHRAQLSSGQVL  153 (347)
Q Consensus        80 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~-----~aa~l~~~~~~-a~~~l~~~~~~~~~~~V  153 (347)
                      ++  |++++|++||+|++.   ++|+||.+.+.+.+.++|+..+..     ..+++....+| ||.++  ....+.|++|
T Consensus        72 v~--S~~~~f~~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl--~~~~k~Getv  144 (147)
T d1v3va1          72 VE--SKNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM--LNGANLGKAV  144 (147)
T ss_dssp             EE--ESCTTSCTTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH--HTTCCSSEEE
T ss_pred             EE--eCCCcccCCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh--hCCCCCCCEE
Confidence            87  788999999999985   679999999999999998765432     34556666666 55465  4445679999


Q ss_pred             EE
Q 019049          154 LV  155 (347)
Q Consensus       154 lI  155 (347)
                      ++
T Consensus       145 v~  146 (147)
T d1v3va1         145 VT  146 (147)
T ss_dssp             EE
T ss_pred             Ee
Confidence            87

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.30  E-value=2.7e-06  Score=64.89  Aligned_cols=103  Identities=22%  Similarity=0.272  Sum_probs=76.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC--CC--------------CCc-hhhHHH
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL--SN--------------ESV-IPSVKE  212 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~--~~--------------~~~-~~~~~~  212 (347)
                      .-+|+|+|+ |..|+.+++.|+.+|++|++++.+.++++++++++...+...  ..              .++ ..+.+.
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            458999999 999999999999999999999999999999999986554210  00              011 112333


Q ss_pred             HHHHhcCCcccEEEeCCC---c--cc--hHHHHhccccCCEEEEEeecCC
Q 019049          213 FLKARKLKGVDVLYDPVG---G--KL--TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g---~--~~--~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +.+..  ...|+||-++=   .  +.  .+..++.|+++..+|++....+
T Consensus       108 l~~~l--~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqG  155 (183)
T d1l7da1         108 VLKEL--VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAG  155 (183)
T ss_dssp             HHHHH--TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGT
T ss_pred             HHHHH--HhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCC
Confidence            33333  36899998763   2  32  3789999999999999986654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.27  E-value=4.5e-05  Score=62.19  Aligned_cols=182  Identities=21%  Similarity=0.258  Sum_probs=101.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +|+++||+|+++++|.+.++.+...|++|++++++.++.+.+     ++.|.....-.-+..-.++++++.+..  ..++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            588999999999999999999999999999999998876543     334544322112222222233333322  1247


Q ss_pred             ccEEEeCCCcc--------------------------chHHHHhccc--cCCEEEEEeecCC-CCCC--c-chh------
Q 019049          222 VDVLYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFASG-EIPV--I-PAN------  263 (347)
Q Consensus       222 ~d~v~d~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~-~~~~--~-~~~------  263 (347)
                      +|++++++|..                          ..+.++..|+  .+|+++.++.... ....  . .+.      
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal  163 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV  163 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhH
Confidence            99999998841                          1123344553  3589999875432 2111  1 111      


Q ss_pred             ---------HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC---cce
Q 019049          264 ---------IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK---VIG  331 (347)
Q Consensus       264 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~---~~g  331 (347)
                               .+..+++++.....+.......+......+..-.+.+.    .+..+.-..+|+-++...+.+..   ..|
T Consensus       164 ~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~----~pl~R~~~pedvA~~v~fL~S~~a~~itG  239 (251)
T d1vl8a_         164 ASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR----IPLGRTGVPEDLKGVAVFLASEEAKYVTG  239 (251)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHT----CTTSSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhc----CCCCCCCCHHHHHHHHHHHhCchhCCCcC
Confidence                     12345788887776654322211111111111112221    12223345788888888877533   355


Q ss_pred             eEE
Q 019049          332 KVM  334 (347)
Q Consensus       332 k~v  334 (347)
                      ..+
T Consensus       240 ~~i  242 (251)
T d1vl8a_         240 QII  242 (251)
T ss_dssp             CEE
T ss_pred             cEE
Confidence            444

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.25  E-value=2.5e-06  Score=64.13  Aligned_cols=96  Identities=20%  Similarity=0.267  Sum_probs=72.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC--cEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .-+|+|+|+ |..|+.+++.|+.+|++|++++.+.++++++++...  .......       .+.+.+..  ..+|+||.
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~-------~~~l~~~~--~~aDivI~  101 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN-------SAEIETAV--AEADLLIG  101 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECC-------HHHHHHHH--HTCSEEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhh-------hhhHHHhh--ccCcEEEE
Confidence            459999999 999999999999999999999999999999986432  2222222       12222322  35799999


Q ss_pred             CCC---c--cc--hHHHHhccccCCEEEEEeecCC
Q 019049          228 PVG---G--KL--TKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       228 ~~g---~--~~--~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      |+=   .  +.  .+..++.|+++..+|++....+
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqG  136 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQG  136 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeecCCC
Confidence            863   2  32  3789999999999999876654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=0.00016  Score=59.08  Aligned_cols=81  Identities=31%  Similarity=0.459  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCC--cEE---EeCCCCC-chhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGV--DHV---VDLSNES-VIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~--~~v---~~~~~~~-~~~~~~~~~~~~~  218 (347)
                      +|+++||+|+++++|.+.+..+...|++|+.+.++.++.+.+    ++.+.  ...   .|..+++ ..+..+.+.+.. 
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~-   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc-
Confidence            588999999999999999999999999999999999887665    33332  211   1333321 111233333333 


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                       +++|++++++|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             579999999884

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.6e-05  Score=64.94  Aligned_cols=81  Identities=19%  Similarity=0.302  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+.+ ++....+.. +..-.+.++++.+..  ..+++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~-Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILC-DVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEEC-CTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEc-cCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            68999999999999999999999999999999999998887764 443233222 222222244443322  12579999


Q ss_pred             EeCCC
Q 019049          226 YDPVG  230 (347)
Q Consensus       226 ~d~~g  230 (347)
                      ++++|
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99988

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.03  E-value=3.7e-05  Score=59.97  Aligned_cols=75  Identities=17%  Similarity=0.221  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c----C-CcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----G-VDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~----g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      +|++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ +    . .....|..+      ...+.+..  .++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~--~~i   93 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAV--KGA   93 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHT--TTC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhccc------HHHHHHHh--cCc
Confidence            78999999999999999999999999999999999988766632 2    2 223344433      22333333  578


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++|+++|.
T Consensus        94 Dilin~Ag~  102 (191)
T d1luaa1          94 HFVFTAGAI  102 (191)
T ss_dssp             SEEEECCCT
T ss_pred             CeeeecCcc
Confidence            999999884

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.7e-05  Score=64.59  Aligned_cols=80  Identities=25%  Similarity=0.289  Sum_probs=59.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++++.+. +++....+..+-.+ .+.++++.+.  -+.+|++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~--~g~iDilVn   82 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGD-WEATERALGS--VGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTT--CCCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCC-HHHHHHHHHH--hCCceEEEe
Confidence            7899999999999999999999999999999999999877664 45533333322222 2335555443  357999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        83 nAg~   86 (244)
T d1pr9a_          83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9884

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=1.7e-05  Score=64.42  Aligned_cols=80  Identities=25%  Similarity=0.258  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+. +++....+..+-.+ .+.+++..+.  .+++|++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~--~g~iDilVn   80 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD-WDATEKALGG--IGPVDLLVN   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTT--CCCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCC-HHHHHHHHHH--cCCCeEEEE
Confidence            5899999999999999999999999999999999998876664 44433333222222 2334555443  357999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        81 nAg~   84 (242)
T d1cyda_          81 NAAL   84 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9884

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.5e-05  Score=62.53  Aligned_cols=83  Identities=17%  Similarity=0.188  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|++++|+||++++|...+..+...|++|+++++++++++.+    ++.|.......-+..-.+.++...+..  ..+.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999999887655    345533222222222222233333321  34579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        86 dilinnag~   94 (244)
T d1yb1a_          86 SILVNNAGV   94 (244)
T ss_dssp             SEEEECCCC
T ss_pred             ceeEeeccc
Confidence            999999984

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=2.3e-05  Score=63.64  Aligned_cols=83  Identities=23%  Similarity=0.208  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .|++++|+|+++++|.+.++.+...|++|+++++++++.+.+. +++.......-+..-.++++++.+..  ..+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            6899999999999999999999999999999999998877664 45532222111211122233333322  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        85 innAG~   90 (244)
T d1nffa_          85 VNNAGI   90 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.95  E-value=3.2e-05  Score=63.41  Aligned_cols=83  Identities=17%  Similarity=0.231  Sum_probs=58.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHH---hcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKA---RKLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~---~~~~~  221 (347)
                      +|+++||+|+++++|.+.++.+...|++|+.+++++++.+.+    ++.+.......-+..-.++++++.+.   ..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998876554    34554443322222222223333322   22346


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      .|++++++|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            8999999885

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.94  E-value=2.4e-05  Score=63.92  Aligned_cols=83  Identities=19%  Similarity=0.252  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++.+.+ ++++.......-+..-.++++++.+..  ..+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            689999999999999999999999999999999999887665 456643222222222222233333322  12479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        84 VnnAg~   89 (254)
T d1hdca_          84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EecCcc
Confidence            999884

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.94  E-value=2.1e-05  Score=64.54  Aligned_cols=83  Identities=17%  Similarity=0.199  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +|++++|+|+++++|.+.++.+...|++|++++++.++.+.+ +++|.....-.-+..-.++++++.+..  ..+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            588999999999999999999999999999999999887665 467754333222222222234333322  12579999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999884

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.92  E-value=3.3e-05  Score=63.16  Aligned_cols=107  Identities=22%  Similarity=0.239  Sum_probs=73.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++.+.+. +++........+..-.+..+.+.+..  ..+.+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            6889999999999999999999999999999999998877664 56754443322222222233333322  23578999


Q ss_pred             EeCCCcc--------------------------chHHHHhccc-cCCEEEEEeecCC
Q 019049          226 YDPVGGK--------------------------LTKESLKLLN-WGAQILVIGFASG  255 (347)
Q Consensus       226 ~d~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~  255 (347)
                      ++++|..                          ..+.++..|+ .+|+++.++...+
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            9999841                          1123334454 5799999986554

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=3.1e-05  Score=62.89  Aligned_cols=177  Identities=18%  Similarity=0.254  Sum_probs=102.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE---EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH---VVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +|++++|+|+++++|.+.++.+...|++|+++++++++.+.+. +++...   ..|..+.   ++++++.+..  ..+++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDP---ASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH---HHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCH---HHhhhhhhhhhcccCCc
Confidence            5889999999999999999999999999999999998877664 455332   2233322   2233333322  23579


Q ss_pred             cEEEeCCCcc--------------------------chHHHHhcc--ccCCEEEEEeecCCCC--CC-cchh--------
Q 019049          223 DVLYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEI--PV-IPAN--------  263 (347)
Q Consensus       223 d~v~d~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~--~~-~~~~--------  263 (347)
                      |++++++|..                          ..+.++..|  +.+|+++.++...+..  +. ..+.        
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~  159 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG  159 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHH
Confidence            9999998741                          112233344  3469999997543211  11 1111        


Q ss_pred             -------HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC---cceeE
Q 019049          264 -------IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK---VIGKV  333 (347)
Q Consensus       264 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~---~~gk~  333 (347)
                             .+...++++.....+.....   ......++..+.+.+.   .+..+....+|+-++..++.+..   ..|+.
T Consensus       160 lt~~lA~ela~~gIrVN~I~PG~i~T~---~~~~~~~~~~~~~~~~---~pl~R~~~pedvA~~v~fL~S~~s~~itGq~  233 (243)
T d1q7ba_         160 FSKSLAREVASRGITVNVVAPGFIETD---MTRALSDDQRAGILAQ---VPAGRLGGAQEIANAVAFLASDEAAYITGET  233 (243)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCH---HHHTSCHHHHHHHHTT---CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhCccCeEEEEEecceEech---hhhhhhhhHHHHHHhc---CCCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence                   12345677777776544321   1111111112222221   12233446788988888887543   35544


Q ss_pred             E
Q 019049          334 M  334 (347)
Q Consensus       334 v  334 (347)
                      +
T Consensus       234 i  234 (243)
T d1q7ba_         234 L  234 (243)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=6.3e-05  Score=60.94  Aligned_cols=81  Identities=21%  Similarity=0.281  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEE-EeCCCCCc-hhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHV-VDLSNESV-IPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~-~~~~~~~~~~~~~~~~d~v  225 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++.+.+. ++++..+ .|..+.+- .+..+++.+..  +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL--GRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH--SSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc--CCceEE
Confidence            5899999999999999999999999999999999998887765 4554332 12222211 11122233332  479999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.90  E-value=9.1e-05  Score=61.16  Aligned_cols=105  Identities=21%  Similarity=0.327  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHH----HHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +|+++||.|+++++|.+.++.+...|++|++++++.+ ..+    .+++.|.+......+..-.+.+++..+..  ..++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999987643 333    23455654433322322222333333322  2247


Q ss_pred             ccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeec
Q 019049          222 VDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       222 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +|+++++.|..                          ..+.++..|...|+++.+...
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            89999988741                          123345677888998888654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.90  E-value=4.1e-05  Score=62.75  Aligned_cols=83  Identities=22%  Similarity=0.302  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhc---CCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARK---LKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~---~~~  221 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++++.+.    +.+.......-+..-.+.++++.+...   ++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999999988776553    233322222122222223444443321   246


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        87 idilvnnAG~   96 (259)
T d1xq1a_          87 LDILINNLGA   96 (259)
T ss_dssp             CSEEEEECCC
T ss_pred             cccccccccc
Confidence            8999999884

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.89  E-value=6.2e-05  Score=61.67  Aligned_cols=83  Identities=19%  Similarity=0.251  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh---cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR---KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~---~~~~  221 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++.+.+.    +.|.......-+..-.++.+++.+..   .+..
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999988776553    34433322222222222244433322   1346


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        87 idilvnnAG~   96 (259)
T d2ae2a_          87 LNILVNNAGI   96 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEECCce
Confidence            9999999884

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=3.4e-05  Score=63.14  Aligned_cols=83  Identities=20%  Similarity=0.337  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+    ++.|.....-.-+..-.+.++++.+..  ..+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999998876654    345543322222222222233333322  12479


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999884

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.88  E-value=4.4e-05  Score=62.65  Aligned_cols=83  Identities=22%  Similarity=0.297  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +|+++||+|+++++|.++++.+...|++|+++++++++.+.+.    +.|.......-+..-.++++++.+..  ..+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998776553    34543222212222222233333322  12579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        84 DilVnnaG~   92 (260)
T d1zema1          84 DFLFNNAGY   92 (260)
T ss_dssp             CEEEECCCC
T ss_pred             Ceehhhhcc
Confidence            999998873

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.88  E-value=2.3e-05  Score=64.97  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      +|+++||+|+++++|.++++.+...|++|+++++++++++.+. ++|........+..-.+..+++.+..  ..+.+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            6899999999999999999999999999999999998876654 56643322222222222233333221  13579999


Q ss_pred             EeCCC
Q 019049          226 YDPVG  230 (347)
Q Consensus       226 ~d~~g  230 (347)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99987

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.88  E-value=6.3e-05  Score=61.64  Aligned_cols=105  Identities=22%  Similarity=0.299  Sum_probs=67.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHH----HHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKF----LKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++.++. +..+.    +++.|.+......+..-.+.++...+..  ..++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999876544 33333    3456654333222222212222222211  1246


Q ss_pred             ccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEeec
Q 019049          222 VDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       222 ~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      +|++++++|..                          ..+.++..|+.+|.++.+...
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~  142 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  142 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence            99999999841                          123345577888888877644

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.87  E-value=0.0008  Score=54.66  Aligned_cols=172  Identities=16%  Similarity=0.128  Sum_probs=96.0

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      .|+++||+|++|  ++|.+.++.+...|++|+++.++++..+.++    ..+....+..+-.+. +.++++.+..  ..+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCH-HHHHHHHHHHHHhcC
Confidence            689999999977  7999999999999999999988876444332    344444443332222 2233333221  125


Q ss_pred             cccEEEeCCCcc--------c----------------------hHHHHhccccCCEEEEEeecCCCCCCcchh-------
Q 019049          221 GVDVLYDPVGGK--------L----------------------TKESLKLLNWGAQILVIGFASGEIPVIPAN-------  263 (347)
Q Consensus       221 ~~d~v~d~~g~~--------~----------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------  263 (347)
                      ++|++++++|..        .                      .+.+...++++|+++.++............       
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  165 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKA  165 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHH
Confidence            799999988731        0                      011233667789999887654322211111       


Q ss_pred             -----------HhhhcceEEEEEEeccccccCchh---HHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC
Q 019049          264 -----------IALVKNWTVHGLYWGSYKIHRPHV---LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK  328 (347)
Q Consensus       264 -----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~  328 (347)
                                 .+..+++++.....+.........   ..+..+...+..       +..+.-..+|+-++..++.+.+
T Consensus       166 al~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~-------pl~R~~~pedvA~~v~fL~S~~  237 (256)
T d1ulua_         166 ALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTA-------PLRRNITQEEVGNLGLFLLSPL  237 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHS-------TTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcC-------CCCCCcCHHHHHHHHHHHhCch
Confidence                       123556777776655433211111   012222222221       2223446788999888887643

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.1e-05  Score=63.43  Aligned_cols=102  Identities=21%  Similarity=0.337  Sum_probs=65.5

Q ss_pred             CCEE-EEecCCchHHHHHHHH-HHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          150 GQVL-LVLGAAGGVGVAAVQI-GKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       150 ~~~V-lI~g~~g~~G~~~~~l-a~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      |++| ||+|+++++|+++++. ++..|++|++++++.++.+.+    ++.|.. .++..+-.+. ++++++.+..  ..+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~-~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCH-HHHHHHHHHHHHhcC
Confidence            5677 8999999999998865 455689999999999987655    333422 2222222222 2233332221  125


Q ss_pred             cccEEEeCCCcc--------------------------chHHHHhccccCCEEEEEee
Q 019049          221 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       221 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ++|++++++|-.                          ..+.++..|++.|+++.++.
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            799999999841                          11334567788899998864

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=2.5e-05  Score=63.62  Aligned_cols=81  Identities=25%  Similarity=0.265  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~  226 (347)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+++.+... +..+-.+ .++++++.+..  ..+++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~Dv~~-~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF-FQVDLED-ERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEE-EECCTTC-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeE-EEEeCCC-HHHHHHHHHHHHHhcCCCCeEE
Confidence            7899999999999999999999999999999999988888888777543 2222111 12233333322  125799999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      +++|.
T Consensus        82 nnAG~   86 (248)
T d2d1ya1          82 NNAAI   86 (248)
T ss_dssp             ECCCC
T ss_pred             EeCcC
Confidence            99884

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.84  E-value=5e-05  Score=61.54  Aligned_cols=172  Identities=18%  Similarity=0.175  Sum_probs=100.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  225 (347)
                      .|+++||.|+++++|.+.++-+...|++|+++.++.++.+... +++........+..-.+..+++.+..  ..+++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            6899999999999999999999999999999999998776654 56754332222222222243333322  12579999


Q ss_pred             EeCCCcc--------------------------chHHHHhccccCCEEEEEeecCCCCCCcchh----------------
Q 019049          226 YDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPAN----------------  263 (347)
Q Consensus       226 ~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----------------  263 (347)
                      ++++|..                          ..+.++..++.++.++.++....... ....                
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-~~~~~Y~~sK~al~~lt~~l  162 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-FGLAHYAAGKLGVVGLARTL  162 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-HHHHHHHHCSSHHHHHHHHH
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-cCccccchhhHHHHHHHHHH
Confidence            9987731                          11233456777777776654432211 1000                


Q ss_pred             --HhhhcceEEEEEEeccccccCch-hHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC
Q 019049          264 --IALVKNWTVHGLYWGSYKIHRPH-VLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK  328 (347)
Q Consensus       264 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~  328 (347)
                        .+..+++++.....+......-. ...+..++..+   .    .+..+.-..+|+-++...+.+..
T Consensus       163 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~---~----~p~~r~~~p~dva~~v~fL~S~~  223 (241)
T d2a4ka1         163 ALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG---A----SPLGRAGRPEEVAQAALFLLSEE  223 (241)
T ss_dssp             HHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHH---T----STTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHh---C----CCCCCCcCHHHHHHHHHHHhcch
Confidence              12345677777766554321111 11222333222   1    11223335788989888888643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.83  E-value=9.2e-05  Score=60.55  Aligned_cols=83  Identities=25%  Similarity=0.404  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|+.+||+|+++++|.+.++.+...|++|+++++++++.+.+    ++.|.......-+..-.++++++.+..  ..+++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            367789999999999999999999999999999998876654    345543322222222222244444332  23579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        81 DilVnnAG~   89 (257)
T d2rhca1          81 DVLVNNAGR   89 (257)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEecccc
Confidence            999999884

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.81  E-value=7.5e-05  Score=62.40  Aligned_cols=82  Identities=16%  Similarity=0.288  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-----HhcCCc-EEEeCCCCCchhhHHHHHHH--hcCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----KSLGVD-HVVDLSNESVIPSVKEFLKA--RKLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-----~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~~  220 (347)
                      +|+++||+|+++++|.++++.+...|++|++++++.++.+.+     .+.|.. ..+..+-.+ .+.++.....  ...+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~-~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC-hHHHHHHhhhhhhhcc
Confidence            579999999999999999999999999999999998876543     233433 233222222 2223332222  2346


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            89999999884

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5.2e-05  Score=62.00  Aligned_cols=80  Identities=25%  Similarity=0.348  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCcEE---EeCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVDHV---VDLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~~v---~~~~~~~~~~~~~~~~~~~--  217 (347)
                      +|+++||+|+++++|.+.++.+...|++|++++++.++.+.+. ++     +....   .|..+.   ++++++.+..  
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ---QQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH---HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCH---HHHHHHHHHHHH
Confidence            5899999999999999999999999999999999998776553 22     21221   233322   2233333322  


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+++|++++++|.
T Consensus        79 ~~G~iDilVnnAg~   92 (254)
T d2gdza1          79 HFGRLDILVNNAGV   92 (254)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCcCeecccccc
Confidence            12479999999985

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.79  E-value=7.7e-05  Score=60.78  Aligned_cols=180  Identities=19%  Similarity=0.197  Sum_probs=100.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .++.+||+|+++++|.+.++.+...|++|+++++++++.+.+    ++.|.......-+..-.++++++.+..  ..+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            578999999999999999999999999999999998877654    345543222222222222234333322  24589


Q ss_pred             cEEEeCCCcc--------------------------chHHHHhcc--ccCCEEEEEeecCCCC--C-Ccchh--------
Q 019049          223 DVLYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEI--P-VIPAN--------  263 (347)
Q Consensus       223 d~v~d~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~--~-~~~~~--------  263 (347)
                      |++++++|..                          ..+.++..+  +.+|+++.++...+..  + ...+.        
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  168 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG  168 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHH
Confidence            9999988841                          112223233  3469999987543211  1 11111        


Q ss_pred             -------HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC---cceeE
Q 019049          264 -------IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK---VIGKV  333 (347)
Q Consensus       264 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~---~~gk~  333 (347)
                             .+...++++.....+.......   .+..++..+.+.+.   .+..+.-..+|+-++..++.+..   ..|..
T Consensus       169 ltr~lA~el~~~gIrVN~V~PG~v~T~~~---~~~~~~~~~~~~~~---~pl~R~~~pedvA~~v~fL~S~~s~~itG~~  242 (251)
T d2c07a1         169 FTKSLAKELASRNITVNAIAPGFISSDMT---DKISEQIKKNIISN---IPAGRMGTPEEVANLACFLSSDKSGYINGRV  242 (251)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTT---CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhhhCeEEEEEccCCEecccc---cccCHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCchhCCCcCcE
Confidence                   1235567777777655432111   11112222222222   12223446788888888877543   35554


Q ss_pred             E
Q 019049          334 M  334 (347)
Q Consensus       334 v  334 (347)
                      +
T Consensus       243 i  243 (251)
T d2c07a1         243 F  243 (251)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.79  E-value=6.5e-06  Score=66.80  Aligned_cols=101  Identities=19%  Similarity=0.183  Sum_probs=65.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh----HHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS----VKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~~~~~~~~~~d~  224 (347)
                      +|++|||+|+++++|.+.++.+...|++|+.+++++.+.      ..............++    ...+.......++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------ccccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            478999999999999999999999999999998765421      1111121112222111    223333345557999


Q ss_pred             EEeCCCc----c-----------------------chHHHHhccccCCEEEEEeecCC
Q 019049          225 LYDPVGG----K-----------------------LTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       225 v~d~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                      +++++|.    .                       ....++..++++|+++.++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            9999873    1                       11223447788999999976543

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.77  E-value=0.0002  Score=58.57  Aligned_cols=101  Identities=18%  Similarity=0.297  Sum_probs=71.4

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~  214 (347)
                      +...++++||++||=.|+  |.|.++..+|+..|  .+|+.++.+++..+.+++    +|..........+..       
T Consensus        95 Ii~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~-------  165 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS-------  165 (266)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG-------
T ss_pred             HHHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccc-------
Confidence            347899999999999998  34788888898875  599999999998777743    553211221111220       


Q ss_pred             HHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEE
Q 019049          215 KARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  250 (347)
                      .......+|.|+--.+.  ..+..+.++|+|+|+++.+
T Consensus       166 ~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~  203 (266)
T d1o54a_         166 EGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATV  203 (266)
T ss_dssp             GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEE
T ss_pred             ccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEE
Confidence            11234568887766655  4679999999999999875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.77  E-value=6.1e-05  Score=61.79  Aligned_cols=83  Identities=20%  Similarity=0.263  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+     ++.|.....-.-+..-.+.++++.+..  ..++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            588999999999999999999999999999999988765433     334543322222222222244444322  2358


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=5.9e-05  Score=61.25  Aligned_cols=80  Identities=24%  Similarity=0.287  Sum_probs=59.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|+++||.|+++++|.+.++.+...|++|+++++++++++.+.+.......- .+....+..+...+..  .+.|+++++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~--~~id~lVn~   81 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV-LDVTKKKQIDQFANEV--ERLDVLFNV   81 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEE-CCTTCHHHHHHHHHHC--SCCSEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceee-eecccccccccccccc--ccceeEEec
Confidence            6889999999999999999999999999999999998887776543322222 2233333344444443  578999999


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      .|.
T Consensus        82 ag~   84 (245)
T d2ag5a1          82 AGF   84 (245)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            884

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.74  E-value=9.4e-05  Score=60.25  Aligned_cols=82  Identities=18%  Similarity=0.228  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+. +++   ....+..+-.+ .++++++.+..  ..+++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC-HHHHHHHHHHHHHHhCCc
Confidence            5899999999999999999999999999999999998877664 333   11222222111 12233333221  12579


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        84 DiLVnnAg~   92 (251)
T d1zk4a1          84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEecccc
Confidence            999999884

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.72  E-value=0.00011  Score=60.06  Aligned_cols=79  Identities=23%  Similarity=0.410  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCcEE-E--eCCCCCchhhHHHHHHHh--
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVDHV-V--DLSNESVIPSVKEFLKAR--  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~~v-~--~~~~~~~~~~~~~~~~~~--  217 (347)
                      .|++++|+|+++++|.+.++.+...|++|++++++.++.+.+.+    .  +.... +  |..+.   ++++++.+..  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~---~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE---AQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH---HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCH---HHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987765522    2  22222 2  33332   2233333322  


Q ss_pred             cCCcccEEEeCCC
Q 019049          218 KLKGVDVLYDPVG  230 (347)
Q Consensus       218 ~~~~~d~v~d~~g  230 (347)
                      ..+++|++++++|
T Consensus        80 ~~G~iDiLVnnAG   92 (258)
T d1iy8a_          80 RFGRIDGFFNNAG   92 (258)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HhCCCCEEEECCc
Confidence            1257999999987

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.71  E-value=6e-05  Score=59.64  Aligned_cols=110  Identities=18%  Similarity=0.288  Sum_probs=75.4

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCC
Q 019049          130 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNES  205 (347)
Q Consensus       130 l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~  205 (347)
                      +..+.+.|.  +.+.+.+++|++||.+|+  +.|..++-+++..|.+|++++..++-.+.+    +++|.+.+.......
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~  136 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG  136 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc
Confidence            344555554  236788999999999997  568888888888898899999987744444    456755443222111


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEE
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~  250 (347)
                      . +      .......||.|+-+.+-+.. ..+++.|+++|+++..
T Consensus       137 ~-~------g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         137 S-K------GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             G-G------CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             c-c------CCcccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            1 0      00123579999887765444 6788999999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=0.00016  Score=54.98  Aligned_cols=98  Identities=12%  Similarity=0.173  Sum_probs=63.7

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cC---CcEEEeCCCCCchhhHHHHH
Q 019049          139 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG---VDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       139 ~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g---~~~v~~~~~~~~~~~~~~~~  214 (347)
                      .+|....-..+|++|||.|+ |+.+.+++..+...|++|+++.|+.+|.+.+.+ +.   ....+...+           
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----------   74 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----------   74 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----------
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-----------
Confidence            34544433457899999999 999999999999999999999999998776643 33   212221111           


Q ss_pred             HHhcCCcccEEEeCCCccch----HHHHhccccCCEEEEE
Q 019049          215 KARKLKGVDVLYDPVGGKLT----KESLKLLNWGAQILVI  250 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~~~~----~~~~~~l~~~G~~v~~  250 (347)
                        .....+|++++|++....    ..-.+.+++...++++
T Consensus        75 --~~~~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~  112 (170)
T d1nyta1          75 --LEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDM  112 (170)
T ss_dssp             --GTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEES
T ss_pred             --ccccccceeecccccCcccCCCCCcHHHhccCcEEEEe
Confidence              123578999999874321    1123445555555443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=0.00013  Score=60.89  Aligned_cols=84  Identities=25%  Similarity=0.325  Sum_probs=56.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc--------CCcEEEeCCCCCchhhHHHHHHHh-
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--------GVDHVVDLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~--------g~~~v~~~~~~~~~~~~~~~~~~~-  217 (347)
                      =+|+++||+|+++++|.++++.+...|++|++++++.++.+.+. ++        +........+..-.++++++.+.. 
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999988765542 21        222222111211122233333322 


Q ss_pred             -cCCcccEEEeCCCc
Q 019049          218 -KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 -~~~~~d~v~d~~g~  231 (347)
                       ..+++|++++++|.
T Consensus        90 ~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeEEEEeeccc
Confidence             12479999999884

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.69  E-value=0.00012  Score=55.62  Aligned_cols=71  Identities=21%  Similarity=0.301  Sum_probs=55.5

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      +..++.++++|+|.|+ |+.+.+++..++..|+ +++++.++.+|.+.+. .++...+ +..               ...
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~---------------~~~   72 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSL---------------ENQ   72 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCC---------------TTC
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hcc---------------ccc
Confidence            5566778899999999 9999999999999998 8999999999887775 4554332 211               114


Q ss_pred             cccEEEeCCC
Q 019049          221 GVDVLYDPVG  230 (347)
Q Consensus       221 ~~d~v~d~~g  230 (347)
                      .+|++++|++
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            6899999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.69  E-value=7.9e-05  Score=61.06  Aligned_cols=83  Identities=18%  Similarity=0.300  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHH----HHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  221 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  221 (347)
                      +|++++|+|+++++|.+.++.+...|++|+++.++.+ +.+    .+++.|.....-.-+..-.++++++.+..  ..++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6889999999999999999999999999999998754 333    33455643222111222222233333321  1247


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      +|++++++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999884

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00016  Score=58.14  Aligned_cols=74  Identities=30%  Similarity=0.380  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++.   ++.+...+. .+   +.+..+.+.+..  +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l---~~~~~~~~~-~D---v~~~~~~~~~~~--g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRYVV-CD---LRKDLDLLFEKV--KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEEEE-CC---TTTCHHHHHHHS--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HhcCCcEEE-cc---hHHHHHHHHHHh--CCCcEEEec
Confidence            578999999999999999999999999999999987644   444543322 22   112255555554  479999999


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      +|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.68  E-value=0.00015  Score=59.73  Aligned_cols=81  Identities=20%  Similarity=0.362  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  222 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++.+.+. +++   ....+..+ ..-.++++++.+..  ..+.+
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD-VTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECC-TTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEcc-CCCHHHHHHHHHHHHHHcCCc
Confidence            6899999999999999999999999999999999998877664 333   22222222 11122233333221  22579


Q ss_pred             cEEEeCCC
Q 019049          223 DVLYDPVG  230 (347)
Q Consensus       223 d~v~d~~g  230 (347)
                      |++++++|
T Consensus        84 D~lVnnAG   91 (268)
T d2bgka1          84 DIMFGNVG   91 (268)
T ss_dssp             CEEEECCC
T ss_pred             ceeccccc
Confidence            99999987

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.68  E-value=4e-05  Score=62.54  Aligned_cols=82  Identities=28%  Similarity=0.302  Sum_probs=56.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcC-Cc-EEE--eCCCCC-chhhHHHHHHHhcCCcc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLG-VD-HVV--DLSNES-VIPSVKEFLKARKLKGV  222 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g-~~-~v~--~~~~~~-~~~~~~~~~~~~~~~~~  222 (347)
                      .++|||+||++++|.+.++.+...|+  +|+.++++.++.+.+++.. .. +++  |..+.+ .....+.+.+..+..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47999999999999999988888886  7899999999888887643 22 222  222221 11123333333444569


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999983

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.67  E-value=0.00013  Score=58.72  Aligned_cols=99  Identities=19%  Similarity=0.244  Sum_probs=65.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh----HHHHHHHhcCCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS----VKEFLKARKLKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~~~~~~~~~~d~v  225 (347)
                      +.+|||+|+++++|.+.++.+...|++|+++++++++..      ........+.+..+.    .+.+......+.+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357999999999999999999999999999998765321      112222222222222    2223333456789999


Q ss_pred             EeCCCc----c-----------------------chHHHHhccccCCEEEEEeecC
Q 019049          226 YDPVGG----K-----------------------LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       226 ~d~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      ++++|.    .                       ..+.++..|+++|+++.++...
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~  131 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  131 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence            999873    1                       0122345778889999987654

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.67  E-value=0.00013  Score=59.19  Aligned_cols=83  Identities=22%  Similarity=0.223  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +|++++|+|+++++|.+.++.+...|++|+++++++++  .+.+++.|.....-.-+..-.++++.+.+..  ..+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999987643  2334567744332222222222233333322  1257999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        84 lVnnAG~   90 (247)
T d2ew8a1          84 LVNNAGI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.66  E-value=0.00021  Score=58.23  Aligned_cols=81  Identities=23%  Similarity=0.196  Sum_probs=55.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      +.+||+|+++++|.+.++.+...|++|+++++++++.+.+    ++.|.......-+..-.++++++.+..  ..+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            3469999999999999999999999999999999877655    345543322212222222344443332  2357999


Q ss_pred             EEeCCCc
Q 019049          225 LYDPVGG  231 (347)
Q Consensus       225 v~d~~g~  231 (347)
                      +++++|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999884

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=0.00014  Score=59.81  Aligned_cols=84  Identities=19%  Similarity=0.205  Sum_probs=55.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      =+|+++||+||++++|.+.+..+...|++|++++++.++++.+.+     .+........+.+............  ..+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999999998876632     2332222222222212122222211  134


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ..|+++++.|.
T Consensus        92 ~~~~li~nag~  102 (269)
T d1xu9a_          92 GLDMLILNHIT  102 (269)
T ss_dssp             SCSEEEECCCC
T ss_pred             Ccccccccccc
Confidence            68888887763

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.65  E-value=0.00015  Score=59.40  Aligned_cols=83  Identities=23%  Similarity=0.350  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHH-----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFL-----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~-----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  220 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++.+++ ++.+.+     ...|.......-+..-.++++++.+..  ..+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999999999999999999864 444333     234544333222222223344433322  125


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ++|++++++|.
T Consensus        83 ~iDiLVnnAG~   93 (260)
T d1x1ta1          83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEeeccc
Confidence            79999999884

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.64  E-value=6.8e-05  Score=61.21  Aligned_cols=81  Identities=15%  Similarity=0.155  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC-cEEE-eCCCC-C---chhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVV-DLSNE-S---VIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~-~~v~-~~~~~-~---~~~~~~~~~~~~~  218 (347)
                      .|++|||+|+++++|.+++..+...|++|+++.++.++.+.+.+    .+- ...+ ..+.. +   ..+..+.+.+.. 
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc-
Confidence            58999999999999999999999999999999887665544432    222 2111 22211 1   111233333332 


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                       +++|++++++|.
T Consensus        83 -g~iDilvnnAG~   94 (254)
T d1sbya1          83 -KTVDILINGAGI   94 (254)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEeCCCC
Confidence             479999999995

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.63  E-value=9.9e-05  Score=60.91  Aligned_cols=80  Identities=21%  Similarity=0.442  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC--c--EEE--eCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--D--HVV--DLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~--~--~v~--~~~~~~~~~~~~~~~~~~-  217 (347)
                      +|+++||+|+++++|.+.++.+...|++|+++++++++++.+.    +.+.  .  ..+  |..+.   ++++++.+.. 
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~---~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE---DGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH---HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCH---HHHHHHHHHHH
Confidence            5789999999999999999999999999999999998876653    2331  1  122  33322   2233333322 


Q ss_pred             -cCCcccEEEeCCCc
Q 019049          218 -KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 -~~~~~d~v~d~~g~  231 (347)
                       ..+++|++++++|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCceEEEeCCcc
Confidence             12579999999874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.63  E-value=0.00013  Score=60.29  Aligned_cols=79  Identities=24%  Similarity=0.491  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC--c--EEE--eCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--D--HVV--DLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~--~--~v~--~~~~~~~~~~~~~~~~~~-  217 (347)
                      .|++++|+|+++++|.+.++.+...|++|+++++++++++.+.    +.|.  .  ..+  |..+.   ++++++.+.. 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA---SGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH---HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCH---HHHHHHHHHHH
Confidence            5899999999999999999999999999999999988776553    3332  1  122  33322   2233333322 


Q ss_pred             -cCCcccEEEeCCC
Q 019049          218 -KLKGVDVLYDPVG  230 (347)
Q Consensus       218 -~~~~~d~v~d~~g  230 (347)
                       ..+.+|++++++|
T Consensus        80 ~~~G~iDilVnnAG   93 (274)
T d1xhla_          80 AKFGKIDILVNNAG   93 (274)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCceEEEeecc
Confidence             1247999999987

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.56  E-value=0.00024  Score=58.27  Aligned_cols=79  Identities=25%  Similarity=0.443  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC----cEEE--eCCCCCchhhHHHHHHHh-
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV----DHVV--DLSNESVIPSVKEFLKAR-  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~----~~v~--~~~~~~~~~~~~~~~~~~-  217 (347)
                      .|+.+||+|+++++|.+.++.+...|++|++++++.++++.+.    +.|.    ...+  |..+.   +.++++.+.. 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~---~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD---AGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH---HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCH---HHHHHHHHHHH
Confidence            6889999999999999999999999999999999988776553    2331    1122  33222   2233333322 


Q ss_pred             -cCCcccEEEeCCC
Q 019049          218 -KLKGVDVLYDPVG  230 (347)
Q Consensus       218 -~~~~~d~v~d~~g  230 (347)
                       ..+++|++++++|
T Consensus        81 ~~~g~iDilvnnAG   94 (264)
T d1spxa_          81 GKFGKLDILVNNAG   94 (264)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHhCCCCEeecccc
Confidence             2357999999987

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.53  E-value=0.00029  Score=53.23  Aligned_cols=85  Identities=14%  Similarity=0.094  Sum_probs=62.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|.|+|. |.+|...+..++..|.+|++.++++++.+.+++.|. +...+ ..+.             -...|+||-|+.
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~-~~~~-------------~~~~DiIilavp   66 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ-DLSL-------------LQTAKIIFLCTP   66 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES-CGGG-------------GTTCSEEEECSC
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee-eccc-------------ccccccccccCc
Confidence            5889999 999999999999999999999999999999998884 33322 1111             147799999887


Q ss_pred             cc----chHHHHhccccCCEEEEEe
Q 019049          231 GK----LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       231 ~~----~~~~~~~~l~~~G~~v~~g  251 (347)
                      ..    .++.+...++++-.++.++
T Consensus        67 ~~~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          67 IQLILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             Hhhhhhhhhhhhhhcccccceeecc
Confidence            54    3444555666666666553

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=9.2e-05  Score=58.29  Aligned_cols=96  Identities=11%  Similarity=0.141  Sum_probs=64.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      .++|+|.||+|.+|..++..+...|++|+++++++++.......++.. +..+-.+    .+.+.+..  .++|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~~gD~~d----~~~l~~al--~~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHV-VVGDVLQ----AADVDKTV--AGQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEE-EESCTTS----HHHHHHHH--TTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccccc-ccccccc----hhhHHHHh--cCCCEEEEEe
Confidence            478999999999999999988889999999999988765444444433 3333222    23343434  3689999998


Q ss_pred             Ccc-----------chHHHHhccccCC--EEEEEee
Q 019049          230 GGK-----------LTKESLKLLNWGA--QILVIGF  252 (347)
Q Consensus       230 g~~-----------~~~~~~~~l~~~G--~~v~~g~  252 (347)
                      |..           ....+++.++..|  +++.++.
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            841           1123455555543  7777653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.50  E-value=0.00021  Score=56.47  Aligned_cols=107  Identities=20%  Similarity=0.316  Sum_probs=71.7

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCc
Q 019049          133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESV  206 (347)
Q Consensus       133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~  206 (347)
                      +...|.  +.+.+++++|++||-+|+  +.|..++.+++..|  .+|++++.+++..+.+++    .+...+..... +.
T Consensus        61 P~~~a~--~l~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~-d~  135 (213)
T d1dl5a1          61 PSLMAL--FMEWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG-DG  135 (213)
T ss_dssp             HHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-CG
T ss_pred             chhhHH--HHHhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC-ch
Confidence            444444  236788999999999998  34888888998876  489999999987776654    34332221111 11


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEE
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVI  250 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  250 (347)
                      .+.      ......||.|+.+.+-.. ...+++.|+++|+++..
T Consensus       136 ~~~------~~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         136 YYG------VPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GGC------CGGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             HHc------cccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            000      012346999998776544 46788999999999873

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.47  E-value=0.00047  Score=54.66  Aligned_cols=106  Identities=13%  Similarity=0.138  Sum_probs=71.0

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-C-Cc--EEEeCCC-C
Q 019049          130 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-G-VD--HVVDLSN-E  204 (347)
Q Consensus       130 l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g-~~--~v~~~~~-~  204 (347)
                      +..+...|.  +.+...+++|++||-+|+  +.|..++.+++ ++.+|++++.+++..+.+++. . ..  .+...+. .
T Consensus        53 ~~~p~~~a~--ml~~L~l~~g~~VLdIG~--GsGy~ta~La~-l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~  127 (224)
T d1vbfa_          53 TTALNLGIF--MLDELDLHKGQKVLEIGT--GIGYYTALIAE-IVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL  127 (224)
T ss_dssp             ECCHHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHH-HSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred             eehhhhHHH--HHHHhhhcccceEEEecC--CCCHHHHHHHH-HhcccccccccHHHHHHHHHHHhcccccccccCchhh
Confidence            334445554  336788999999999998  46777777776 467999999999877777652 1 11  1221111 1


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEE
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVI  250 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  250 (347)
                      .+          .....||.|+-+.+.+. ...+++.|+++|+++..
T Consensus       128 g~----------~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         128 GY----------EEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             CC----------GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cc----------hhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            11          11256999987666543 46788999999999875

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.46  E-value=0.00027  Score=58.44  Aligned_cols=114  Identities=13%  Similarity=0.097  Sum_probs=75.9

Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD  196 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~  196 (347)
                      +.++++|-      -....-+.+++++++|++||=+|+  |.|..++.+++..|++|++++.++++.+++++    .|-.
T Consensus        40 ~~tL~eAQ------~~k~~~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~  111 (285)
T d1kpga_          40 DMTLQEAQ------IAKIDLALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL  111 (285)
T ss_dssp             TCCHHHHH------HHHHHHHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC
T ss_pred             CCCHHHHH------HHHHHHHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhh
Confidence            44666653      222334457889999999999998  67888999999999999999999998887754    3311


Q ss_pred             EEEeCCCCCchhhHHHHHHHhcCCcccEEEe-----CCCcc----chHHHHhccccCCEEEEEe
Q 019049          197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYD-----PVGGK----LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       197 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d-----~~g~~----~~~~~~~~l~~~G~~v~~g  251 (347)
                      .-+.....++.        .. ...||.|+.     ..+..    .++.+.++|+|+|++++-.
T Consensus       112 ~~v~~~~~d~~--------~~-~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         112 RSKRVLLAGWE--------QF-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             SCEEEEESCGG--------GC-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hhhHHHHhhhh--------cc-cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            11111111220        01 246787643     34432    3577889999999998744

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.46  E-value=0.00036  Score=52.26  Aligned_cols=72  Identities=21%  Similarity=0.341  Sum_probs=53.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      -.+++|||+|+ |.+|.++++.+...|+ +++++.++.+|.+ +++++|.. +.++.      ...+.+     ..+|+|
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~------~~~~~l-----~~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD------ELVDHL-----ARSDVV   88 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG------GHHHHH-----HTCSEE
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch------hHHHHh-----ccCCEE
Confidence            36789999999 9999999999999998 7999999988765 44567743 22221      122222     368999


Q ss_pred             EeCCCcc
Q 019049          226 YDPVGGK  232 (347)
Q Consensus       226 ~d~~g~~  232 (347)
                      |.|++.+
T Consensus        89 i~atss~   95 (159)
T d1gpja2          89 VSATAAP   95 (159)
T ss_dssp             EECCSSS
T ss_pred             EEecCCC
Confidence            9999863

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.0068  Score=48.86  Aligned_cols=84  Identities=19%  Similarity=0.171  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHH-HhcCC
Q 019049          148 SSGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLK-ARKLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~-~~~~~  220 (347)
                      =.|+++||+|+++  ++|.+.+..+...|++|+++.++++..+.+    ...+..........+.......... .....
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            3689999999988  799999999999999999999986654444    2345444444443333221222222 23345


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999987653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.0016  Score=48.26  Aligned_cols=104  Identities=18%  Similarity=0.197  Sum_probs=76.3

Q ss_pred             HHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          138 HVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       138 ~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      +.++.+.-+ +-.|++++|.|- |-+|...++.++.+|++|++++..+.+.-.+..-|....      .    .++.   
T Consensus        11 ~~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~------~----~~~a---   76 (163)
T d1li4a1          11 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT------T----MDEA---   76 (163)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------C----HHHH---
T ss_pred             HHHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee------e----hhhh---
Confidence            344444333 458999999999 999999999999999999999999976555555564321      1    1221   


Q ss_pred             hcCCcccEEEeCCCcc-ch-HHHHhccccCCEEEEEeecCCCC
Q 019049          217 RKLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFASGEI  257 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~  257 (347)
                        -...|+++-|+|.. .+ .+-++.||++..+..+|....+.
T Consensus        77 --~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EI  117 (163)
T d1li4a1          77 --CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEI  117 (163)
T ss_dssp             --TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSB
T ss_pred             --hhhccEEEecCCCccchhHHHHHhccCCeEEEEecccccee
Confidence              13569999999974 33 67889999999888877555443

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.44  E-value=0.00046  Score=57.16  Aligned_cols=114  Identities=14%  Similarity=0.115  Sum_probs=76.0

Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD  196 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~  196 (347)
                      +.++++|-      -..+.-+.+.+++++|++||=+|+  |.|..+..+|+..|++|++++.++++.+.++    +.|..
T Consensus        39 ~~tL~~Aq------~~k~~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~  110 (291)
T d1kpia_          39 DMTLEEAQ------YAKRKLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP  110 (291)
T ss_dssp             TCCHHHHH------HHHHHHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCS
T ss_pred             CCCHHHHH------HHHHHHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccc
Confidence            34666653      122333457889999999999998  5677788999999999999999999866653    45533


Q ss_pred             EEEeCCCCCchhhHHHHHHHhcCCcccEEEe-----CCCc-----------cchHHHHhccccCCEEEEEe
Q 019049          197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYD-----PVGG-----------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       197 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d-----~~g~-----------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ..+.....++.         ...+.||.|+.     ..++           ..++.+.++|+|+|++++-.
T Consensus       111 ~~v~~~~~d~~---------~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         111 RRKEVRIQGWE---------EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             SCEEEEECCGG---------GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             hhhhhhhhccc---------ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            22221112220         12357998863     2332           23577889999999998754

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.40  E-value=0.00056  Score=57.06  Aligned_cols=81  Identities=26%  Similarity=0.333  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHH----HHhcCCcEEEeCCCCCc-hhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------EKIKF----LKSLGVDHVVDLSNESV-IPSVKEFL  214 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~---------~~~~~----~~~~g~~~v~~~~~~~~-~~~~~~~~  214 (347)
                      +|+++||+|+++++|.+.++.+...|++|++++++.         ++.+.    ....+.....+..+.+. .+.++.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            589999999999999999999999999999986543         22222    23345555566655433 22233333


Q ss_pred             HHhcCCcccEEEeCCCc
Q 019049          215 KARKLKGVDVLYDPVGG  231 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~  231 (347)
                      +.  .+++|++++++|.
T Consensus        86 ~~--~G~iDiLVnNAGi  100 (302)
T d1gz6a_          86 DT--FGRIDVVVNNAGI  100 (302)
T ss_dssp             HH--TSCCCEEEECCCC
T ss_pred             HH--cCCCCEEEECCcc
Confidence            32  3579999999884

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.40  E-value=0.00076  Score=48.71  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=58.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|+|.|+ |.+|...++.+...|.+|++++.++++.+.+++ ++.. ++..+..+     ...++..+-..+|.++-+++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~-----~~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTK-----IKTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTS-----HHHHHHTTTTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccc-----hhhhhhcChhhhhhhcccCC
Confidence            6899999 999999999999999999999999999988865 5644 44333322     34555566678999999888


Q ss_pred             ccc
Q 019049          231 GKL  233 (347)
Q Consensus       231 ~~~  233 (347)
                      ++.
T Consensus        75 ~d~   77 (132)
T d1lssa_          75 KEE   77 (132)
T ss_dssp             CHH
T ss_pred             cHH
Confidence            753

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.40  E-value=0.00024  Score=57.66  Aligned_cols=78  Identities=23%  Similarity=0.358  Sum_probs=52.5

Q ss_pred             CEEEEecCCchHHHHHHHHHH---HcCCEEEEEecChhhHHHHHh----cCCcEEE--eCCCCCchhhHHHHHH----Hh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGK---VCGATIIAVARGAEKIKFLKS----LGVDHVV--DLSNESVIPSVKEFLK----AR  217 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~---~~g~~V~~~~~~~~~~~~~~~----~g~~~v~--~~~~~~~~~~~~~~~~----~~  217 (347)
                      ++|||+|+++++|.++++.+.   ..|++|+++++++++.+.+++    .+-..++  |..+.+-   ++++.+    ..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~---v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDA---YDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGG---HHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHH---HHHHHhhhHHHh
Confidence            589999999999999887654   458999999999987665543    2222223  3333222   333333    33


Q ss_pred             cCCcccEEEeCCCc
Q 019049          218 KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 ~~~~~d~v~d~~g~  231 (347)
                      ..+++|++++++|.
T Consensus        80 ~~~~iDiLvnNAg~   93 (248)
T d1snya_          80 KDQGLNVLFNNAGI   93 (248)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             hcCCcceEEeeccc
Confidence            45679999998873

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.39  E-value=0.00069  Score=51.36  Aligned_cols=97  Identities=21%  Similarity=0.244  Sum_probs=61.1

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cC---CcEEEeCCCCCchhhHHHHHH
Q 019049          140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG---VDHVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g---~~~v~~~~~~~~~~~~~~~~~  215 (347)
                      +|......-++++|+|.|+ |+.+.+++..+...+.+|+++.|+.++.+.+.+ ++   ..........           
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-----------   75 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-----------   75 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-----------
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-----------
Confidence            4433333447889999999 999999988887777799999999988776643 32   2222222211           


Q ss_pred             HhcCCcccEEEeCCCccchH----HHHhccccCCEEEEE
Q 019049          216 ARKLKGVDVLYDPVGGKLTK----ESLKLLNWGAQILVI  250 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~~~~~----~~~~~l~~~G~~v~~  250 (347)
                        ....+|++++|++.....    ...+.++++..++.+
T Consensus        76 --~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~  112 (171)
T d1p77a1          76 --PLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDM  112 (171)
T ss_dssp             --CCSCCSEEEECCCC-------CCCHHHHHHCSCEEES
T ss_pred             --cccccceeeecccccccccccchhhhhhcccceeeee
Confidence              125789999998853211    122344555555543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.37  E-value=0.00016  Score=58.82  Aligned_cols=77  Identities=14%  Similarity=0.073  Sum_probs=54.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC--cEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      |.||+|+++++|.+.+..+...|++|++.+++.++.+.++..+.  ..+-..+..+..+..+++.+..  +++|++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~--G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY--GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH--SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc--CCCCEEEECC
Confidence            78999999999999999999999999999998887776654331  1111123334333344444444  5799999876


Q ss_pred             C
Q 019049          230 G  230 (347)
Q Consensus       230 g  230 (347)
                      |
T Consensus        80 g   80 (252)
T d1zmta1          80 I   80 (252)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.35  E-value=0.00088  Score=50.96  Aligned_cols=95  Identities=12%  Similarity=0.045  Sum_probs=62.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +++|+|.|+ |.+|..+++.+...|.+|++++++.++.+.+.+.....................   .  ...|.++.++
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~---i--~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE---V--AKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHH---H--TTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhh---h--hccceeEeec
Confidence            679999999 999999999999999999999999999988876333333333333331112222   2  3567888777


Q ss_pred             Cccch-HHHHhccccCCEEEEE
Q 019049          230 GGKLT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       230 g~~~~-~~~~~~l~~~G~~v~~  250 (347)
                      +.... .....+.+.+-.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          76 PYTFHATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             CGGGHHHHHHHHHHHTCEEECS
T ss_pred             cchhhhHHHHHHHhhccceeec
Confidence            75433 3344555555555543

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.35  E-value=0.00074  Score=54.43  Aligned_cols=99  Identities=16%  Similarity=0.193  Sum_probs=67.6

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cC-CcEEEeCCCCCchhhHHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LG-VDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~~~~~  214 (347)
                      ...++++||++||=.|+  |.|.++..+|+..|  .+|++++.+++..+.+++    ++ ...+ .....++.       
T Consensus        78 i~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~-------  147 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIA-------  147 (250)
T ss_dssp             ---CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTT-------
T ss_pred             HHHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeee-------
Confidence            35789999999999998  34777888888765  489999999998887754    22 2222 11112221       


Q ss_pred             HHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEE
Q 019049          215 KARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  250 (347)
                      +......||.|+--...  ..+..+.+.|+|+|+++..
T Consensus       148 ~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~  185 (250)
T d1yb2a1         148 DFISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFY  185 (250)
T ss_dssp             TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred             cccccceeeeeeecCCchHHHHHHHHHhcCCCceEEEE
Confidence            11234579988855554  4678999999999999875

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.34  E-value=0.00045  Score=56.95  Aligned_cols=114  Identities=13%  Similarity=0.135  Sum_probs=74.9

Q ss_pred             CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc
Q 019049          121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD  196 (347)
Q Consensus       121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~  196 (347)
                      +-++++|-      ...+.-+...++++||++||=+|+  |.|..+..+++..|++|++++.+++..+++++    .|..
T Consensus        30 ~~tL~~AQ------~~k~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~  101 (280)
T d2fk8a1          30 ELTLEEAQ------YAKVDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN  101 (280)
T ss_dssp             TCCHHHHH------HHHHHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred             CCCHHHHH------HHHHHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccc
Confidence            34666663      223444557889999999999998  34556777888899999999999998877754    3422


Q ss_pred             EEEeCCCCCchhhHHHHHHHhcCCcccEEEe-----CCCcc----chHHHHhccccCCEEEEEe
Q 019049          197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYD-----PVGGK----LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       197 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d-----~~g~~----~~~~~~~~l~~~G~~v~~g  251 (347)
                      ..+.....++.+         -.+.||.|+-     ..+.+    .++.+.++|+|+|++++-.
T Consensus       102 ~~~~~~~~d~~~---------~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         102 RSRQVLLQGWED---------FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             SCEEEEESCGGG---------CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             cchhhhhhhhhh---------hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            111111112210         1357888753     33332    3577889999999998743

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00077  Score=54.34  Aligned_cols=100  Identities=20%  Similarity=0.162  Sum_probs=70.3

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHH
Q 019049          140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKE  212 (347)
Q Consensus       140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~  212 (347)
                      .|...+++.||++||=+|+  |.|..+..+++..|++|++++.+++..+.+++    .|..   .+...+..++      
T Consensus        24 ~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~------   95 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY------   95 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC------
T ss_pred             HHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc------
Confidence            4567899999999999998  45667778888889999999999987766543    4532   2222221111      


Q ss_pred             HHHHhcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEe
Q 019049          213 FLKARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                          ...+.||.|+..-.     +  ..+.++.+.|+|+|+++...
T Consensus        96 ----~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 ----VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             ----CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ----cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence                23467998875322     1  34677889999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.26  E-value=5.2e-05  Score=61.25  Aligned_cols=77  Identities=23%  Similarity=0.255  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc-hhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV-IPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+.    ....|..+.+- .+..+++.+..  +++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~--g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQ--GPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHH--SSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhc--CCceEEEe
Confidence            5889999999999999999999999999999999876443221    11223333221 11122233322  47999999


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            9884

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.25  E-value=0.00063  Score=53.96  Aligned_cols=108  Identities=19%  Similarity=0.243  Sum_probs=65.2

Q ss_pred             CcchHHHHHHHHHH-hcCCCCCCEEEEecCCchHHHHHHHHHHH---cC----CEEEEEecChhhHHHHHh---------
Q 019049          130 LPVAFGTSHVALVH-RAQLSSGQVLLVLGAAGGVGVAAVQIGKV---CG----ATIIAVARGAEKIKFLKS---------  192 (347)
Q Consensus       130 l~~~~~~a~~~l~~-~~~~~~~~~VlI~g~~g~~G~~~~~la~~---~g----~~V~~~~~~~~~~~~~~~---------  192 (347)
                      +..+...|. .+.. ...++++++||.+|+  +.|..++.+++.   .|    .+|+.++..++-.+.+++         
T Consensus        61 is~P~~~a~-~l~~L~~~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~  137 (223)
T d1r18a_          61 ISAPHMHAF-ALEYLRDHLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM  137 (223)
T ss_dssp             ECCHHHHHH-HHHHTTTTCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             eehhhhHHH-HHHHHhhccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhh
Confidence            334455554 2211 237899999999997  345555555544   34    489999998875554432         


Q ss_pred             cCCcEE--EeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEE
Q 019049          193 LGVDHV--VDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  250 (347)
Q Consensus       193 ~g~~~v--~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~  250 (347)
                      .+...+  ...+.. .+          .....||.|+-+.+-+.. ..+++.|+++|+++..
T Consensus       138 ~~~~nv~~~~~d~~~~~----------~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         138 LDSGQLLIVEGDGRKGY----------PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HHHTSEEEEESCGGGCC----------GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cCccEEEEEeccccccc----------ccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            121111  111111 11          123579999887776443 6788999999999874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.24  E-value=0.00096  Score=51.02  Aligned_cols=93  Identities=19%  Similarity=0.183  Sum_probs=62.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeC------CCCCchhhHHHHHHHhcCCccc
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL------SNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~------~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .++|.|.|+ |.+|++.+..+...|.+|++.++++++.+.+++.+.......      .........++..     ..+|
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            368999999 999999999999999999999999999888877653222110      0000000022222     4689


Q ss_pred             EEEeCCCccchHH----HHhccccCCEEE
Q 019049          224 VLYDPVGGKLTKE----SLKLLNWGAQIL  248 (347)
Q Consensus       224 ~v~d~~g~~~~~~----~~~~l~~~G~~v  248 (347)
                      ++|-++.......    +...++++-.++
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            9999998754444    445566555544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.20  E-value=0.001  Score=46.61  Aligned_cols=89  Identities=10%  Similarity=0.009  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .|++|||.|+ |.+|..-++.+...|++|++++.....  ..++++.+....- .+...+             -.+++++
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-------------GTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHH-------------hCCCcEE
Confidence            5789999999 999999999999999999988765432  2233232222221 111111             2578999


Q ss_pred             EeCCCccch-HHHHhccccCCEEEEEe
Q 019049          226 YDPVGGKLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       226 ~d~~g~~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.+++++.+ .......++.|..|.+.
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEET
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeC
Confidence            999988655 56778889999998764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.20  E-value=0.0017  Score=52.64  Aligned_cols=86  Identities=22%  Similarity=0.307  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhh-------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEK-------IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~-------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ..+|+.++||+|+++++|.+.+..+...|+ +|+.+.++..+       .+.+++.|....+..-+..-.+..+.+....
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            467899999999999999999999988999 57777765321       2233456654332222222222344444433


Q ss_pred             -cCCcccEEEeCCCc
Q 019049          218 -KLKGVDVLYDPVGG  231 (347)
Q Consensus       218 -~~~~~d~v~d~~g~  231 (347)
                       ....+|.++++.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence             33468999998884

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.18  E-value=0.00095  Score=54.75  Aligned_cols=82  Identities=20%  Similarity=0.187  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHH---Hh-cCCcEEEeCCCCCchhhHHHHHHH--hcCC
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFL---KS-LGVDHVVDLSNESVIPSVKEFLKA--RKLK  220 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~~~~---~~-~g~~~v~~~~~~~~~~~~~~~~~~--~~~~  220 (347)
                      +|+++||+|++|  ++|.+.++.+...|++|+++.++++..+.+   .+ .+...+...+..+. +..++....  ...+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE-EHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccch-hhHHHHHHHHHHHcC
Confidence            689999999866  799999999999999999999986433333   22 33323332222221 222222221  1235


Q ss_pred             cccEEEeCCCc
Q 019049          221 GVDVLYDPVGG  231 (347)
Q Consensus       221 ~~d~v~d~~g~  231 (347)
                      .+|+++++.|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            78999998874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.15  E-value=0.0011  Score=53.38  Aligned_cols=168  Identities=17%  Similarity=0.136  Sum_probs=91.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  224 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  224 (347)
                      -+||+|+++++|.+.++.+...|++|++++. ++++.+.+    ++.|.....-.-+..-.++++++.+..  ..+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            5799999999999999999999999988754 55554444    345543222212222222234433322  2357999


Q ss_pred             EEeCCCcc--------------------------chHHHHhcc--ccCCEEEEEeecCCCC--CCc-chh----------
Q 019049          225 LYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEI--PVI-PAN----------  263 (347)
Q Consensus       225 v~d~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~--~~~-~~~----------  263 (347)
                      +++++|..                          ..+.++..|  +.+|+++.++...+..  +.. .+.          
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~lt  162 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFS  162 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHCh
Confidence            99998841                          112234444  4579999987543211  111 111          


Q ss_pred             -----HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHH
Q 019049          264 -----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE  325 (347)
Q Consensus       264 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~  325 (347)
                           .+...++++.....+.....   ......++..+.+.+.   .+..+....+|+-++..++.
T Consensus       163 k~lA~el~~~gIrvN~I~PG~i~T~---~~~~~~~~~~~~~~~~---~pl~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         163 KTAAREGASRNINVNVVCPGFIASD---MTAKLGEDMEKKILGT---IPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHTTTEEEEEEEECSBCSH---HHHTTCHHHHHHHHTS---CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhCcEEEEEecceeccH---HHHHhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHH
Confidence                 12345777777766543211   1111112222222221   12233446788999888875

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00073  Score=53.68  Aligned_cols=105  Identities=15%  Similarity=0.169  Sum_probs=69.0

Q ss_pred             chHHHHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCC-----c--
Q 019049          132 VAFGTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGV-----D--  196 (347)
Q Consensus       132 ~~~~~a~~~l~~~--~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~-----~--  196 (347)
                      .+...|. .+ +.  ..+++|++||-+|+  +.|..++.+++..|  .+|+.++.+++-.+.+++    .+.     .  
T Consensus        59 ~P~~~a~-~l-e~L~~~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~  134 (224)
T d1i1na_          59 APHMHAY-AL-ELLFDQLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV  134 (224)
T ss_dssp             CHHHHHH-HH-HHTTTTSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE
T ss_pred             hhHHHHH-HH-HHHhhccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccce
Confidence            3445444 23 33  37899999999997  56888888888765  489999999886665532    221     1  


Q ss_pred             EEEeCCC-CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049          197 HVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       197 ~v~~~~~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  250 (347)
                      .+...+. ..+          .....||.|+.+.+- .....+++.|+++|+++..
T Consensus       135 ~~~~gD~~~~~----------~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         135 QLVVGDGRMGY----------AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EEEESCGGGCC----------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             EEEEeeccccc----------chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            1111110 001          123579999977665 4447788999999999874

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.11  E-value=0.0014  Score=52.69  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=52.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE-------EEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--c
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGAT-------IIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--K  218 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~-------V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~  218 (347)
                      -|||+|+++++|.+.+..+...|++       |+..+++.++++.+.    +.|.....-.-+..-.++++++.+..  .
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999889987       889999988776553    34533222112222222233333322  2


Q ss_pred             CCcccEEEeCCCc
Q 019049          219 LKGVDVLYDPVGG  231 (347)
Q Consensus       219 ~~~~d~v~d~~g~  231 (347)
                      .+.+|++++++|.
T Consensus        83 ~g~iDilvnnAg~   95 (240)
T d2bd0a1          83 YGHIDCLVNNAGV   95 (240)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCcceeeccccc
Confidence            3579999999884

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.04  E-value=0.0019  Score=48.71  Aligned_cols=89  Identities=20%  Similarity=0.162  Sum_probs=64.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ++|+|+|. |.+|...+..++..|.  +|++.+++++..+.+++.|. +........ .           .....|+++-
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~-----------~~~~~dlIil   68 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK-V-----------EDFSPDFVML   68 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG-G-----------GGTCCSEEEE
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh-h-----------hccccccccc
Confidence            37999998 9999999999988885  89999999999999999885 333322111 1           1136789988


Q ss_pred             CCCcc----chHHHHhccccCCEEEEEee
Q 019049          228 PVGGK----LTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       228 ~~g~~----~~~~~~~~l~~~G~~v~~g~  252 (347)
                      |+...    .+..+...++++-.++.++.
T Consensus        69 a~p~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          69 SSPVRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             cCCchhhhhhhhhhhcccccccccccccc
Confidence            88863    34455567777777776653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.03  E-value=0.0012  Score=47.73  Aligned_cols=75  Identities=19%  Similarity=0.284  Sum_probs=56.4

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++++|.|. |.+|..+++.+...|.+|++++.++++.+.++..|...++ .+..+     ...++..+-..+|.++-+++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~-gd~~~-----~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVI-ANATE-----ENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEE-CCTTC-----TTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCccee-eeccc-----chhhhccCCccccEEEEEcC
Confidence            35789999 9999999999999999999999999999999888865443 22221     12333334457888888887


Q ss_pred             cc
Q 019049          231 GK  232 (347)
Q Consensus       231 ~~  232 (347)
                      +.
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            63

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.02  E-value=0.0019  Score=49.74  Aligned_cols=99  Identities=11%  Similarity=0.097  Sum_probs=65.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCc-----------------EEEeCCCC
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-----------------HVVDLSNE  204 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~-----------------~v~~~~~~  204 (347)
                      ....+.||.+||..|+  |.|..+..+|+ .|++|++++.+++-.+.+++. +..                 ..+..+-.
T Consensus        14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            4567889999999998  45777888876 599999999999988888652 110                 11111111


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeCCCc---------cchHHHHhccccCCEEEEEee
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      +.   ...     ....+|.|++...-         ..+..+.++|+++|++++...
T Consensus        91 ~l---~~~-----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          91 AL---TAR-----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             SS---THH-----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             cc---ccc-----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence            11   000     12367998875442         234667899999999876543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=9.9e-05  Score=50.00  Aligned_cols=83  Identities=19%  Similarity=0.255  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      .|++|+|+|. |..|+++++++...|++|++.+.+..  ..+.+++ +....+.....      . .     ...+|.++
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~------~-~-----~~~~d~vi   69 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-AVERHTGSLND------E-W-----LMAADLIV   69 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-TSCEEESBCCH------H-H-----HHHCSEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-ccceeecccch------h-h-----hccCCEEE
Confidence            5789999999 99999999999999999999998554  1222222 22222221111      1 1     13678888


Q ss_pred             eCCCccchHHHHhccccCC
Q 019049          227 DPVGGKLTKESLKLLNWGA  245 (347)
Q Consensus       227 d~~g~~~~~~~~~~l~~~G  245 (347)
                      -+.|-+.-...+...+..|
T Consensus        70 ~SPGi~~~~~~~~~a~~~g   88 (93)
T d2jfga1          70 ASPGIALAHPSLSAAADAG   88 (93)
T ss_dssp             ECTTSCTTSHHHHHHHHTT
T ss_pred             ECCCCCCCCHHHHHHHHcC
Confidence            8877654444444333333

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.96  E-value=0.005  Score=45.31  Aligned_cols=95  Identities=23%  Similarity=0.233  Sum_probs=73.0

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      -+-.|++++|.|- |-+|.-.++-++.+|++|++++.++-+.=++.--|.. +.     +    .++.     -...|++
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~-v~-----~----~~~a-----~~~aDi~   82 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV-----T----LDEI-----VDKGDFF   82 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC-----C----HHHH-----TTTCSEE
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCc-cC-----c----hhHc-----cccCcEE
Confidence            3468999999999 9999999999999999999999999765555445543 21     1    1221     1467999


Q ss_pred             EeCCCcc-c-hHHHHhccccCCEEEEEeecCCC
Q 019049          226 YDPVGGK-L-TKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       226 ~d~~g~~-~-~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      +-++|.. . ...-++.||++..+..+|-...+
T Consensus        83 vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~E  115 (163)
T d1v8ba1          83 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDE  115 (163)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTTTS
T ss_pred             EEcCCCCccccHHHHHHhhCCeEEEeccccchh
Confidence            9999984 3 36778999999999888755544

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0044  Score=50.97  Aligned_cols=80  Identities=19%  Similarity=0.065  Sum_probs=49.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEE---EEecChhhHH----HHHhc---CCcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATII---AVARGAEKIK----FLKSL---GVDHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~---~~~~~~~~~~----~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      -|||+||++++|.+++..+...|++|+   .+.++.++.+    .++++   +.......-+..-.++.+...+....+.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            468899999999999999998998744   4444443322    22332   3222221122222333555666555568


Q ss_pred             ccEEEeCCCc
Q 019049          222 VDVLYDPVGG  231 (347)
Q Consensus       222 ~d~v~d~~g~  231 (347)
                      .|+++++.|.
T Consensus        84 idilvnnag~   93 (285)
T d1jtva_          84 VDVLVCNAGL   93 (285)
T ss_dssp             CSEEEECCCC
T ss_pred             hhhhhhcccc
Confidence            9999998874

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.94  E-value=0.003  Score=51.21  Aligned_cols=43  Identities=26%  Similarity=0.370  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHH-HH--cCCEEEEEecChhhHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIG-KV--CGATIIAVARGAEKIKFLK  191 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la-~~--~g~~V~~~~~~~~~~~~~~  191 (347)
                      .|+.++|+|+++++|.++++.+ +.  .|++|+++.++.++++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH
Confidence            5778899999999999987655 42  6899999999998877653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.91  E-value=0.0026  Score=50.62  Aligned_cols=101  Identities=20%  Similarity=0.277  Sum_probs=68.1

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHH
Q 019049          140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEF  213 (347)
Q Consensus       140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~  213 (347)
                      .+...+.++||++||=+|+  |.|..+..+++ .+++|++++.+++-++.+++    .|..  .++..+..++       
T Consensus         7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~-~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~-------   76 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSP-YVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-------   76 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-------
T ss_pred             HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHH-hCCeEEEEeCChhhhhhhhhhhcccccccccccccccccc-------
Confidence            3557899999999999998  45777777776 47899999999887666543    3332  1121111111       


Q ss_pred             HHHhcCCcccEEEeCCCc-------cchHHHHhccccCCEEEEEee
Q 019049          214 LKARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                       . ...+.||+|+.+-.-       ..++.+.+.|+|+|++++...
T Consensus        77 -~-~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~~  120 (234)
T d1xxla_          77 -P-FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  120 (234)
T ss_dssp             -C-SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -c-ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEEc
Confidence             0 123569999864431       246788899999999988643

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0059  Score=46.47  Aligned_cols=93  Identities=25%  Similarity=0.336  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH----hcC-----CcEEEeCCCCCchhhHHHHHHHhc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK----SLG-----VDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~----~~g-----~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+++|+|.|+ |+.|.+++..+...|+ +++++.+++++.+.+.    +++     .....+..+      .+.+...+ 
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~-   88 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD------QQAFAEAL-   88 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC------HHHHHHHH-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc------ccchhhhh-
Confidence            6789999999 9999999988888898 7999999877655432    222     112222222      22222222 


Q ss_pred             CCcccEEEeCCCccch----H---HHHhccccCCEEEEE
Q 019049          219 LKGVDVLYDPVGGKLT----K---ESLKLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~g~~~~----~---~~~~~l~~~G~~v~~  250 (347)
                       ..+|++++|++-...    .   .-+..++++..++++
T Consensus        89 -~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di  126 (182)
T d1vi2a1          89 -ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTEC  126 (182)
T ss_dssp             -HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEEC
T ss_pred             -cccceeccccCCccccccchhhhhHHHhhhcchhhHHh
Confidence             367999999874211    1   113566777777766

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.87  E-value=0.0026  Score=51.53  Aligned_cols=99  Identities=20%  Similarity=0.280  Sum_probs=70.2

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----c-C--CcE-EEeCCCCCchhhHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----L-G--VDH-VVDLSNESVIPSVK  211 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~-g--~~~-v~~~~~~~~~~~~~  211 (347)
                      ...++++||++||=.|+  |.|.++..+|+..|  .+|+.++.+++..+.+++    + +  .+. .+...  +..+   
T Consensus        89 i~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~--d~~~---  161 (264)
T d1i9ga_          89 VHEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLAD---  161 (264)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGG---
T ss_pred             HHHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec--cccc---
Confidence            46899999999999987  56888899999886  489999999998877754    1 1  122 22111  1100   


Q ss_pred             HHHHHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEE
Q 019049          212 EFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  250 (347)
                         .......||.||--..+  ..+..+.+.|+++|+++.+
T Consensus       162 ---~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~  199 (264)
T d1i9ga_         162 ---SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVY  199 (264)
T ss_dssp             ---CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred             ---ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEE
Confidence               00124578988765555  4678899999999999875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00087  Score=54.14  Aligned_cols=48  Identities=25%  Similarity=0.300  Sum_probs=41.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD  196 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~  196 (347)
                      +|+.+||+||++++|.+.++.+...|++|++++++.++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998877655 456543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.83  E-value=0.0034  Score=50.57  Aligned_cols=94  Identities=22%  Similarity=0.275  Sum_probs=62.8

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHhcCC
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      ..++|++||=.|+.  .|.+++.++ ..|++|++++.++...+.+++    .|.. .++..   +    ..   ......
T Consensus       117 ~~~~g~~VLDiGcG--sG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d----~~---~~~~~~  183 (254)
T d2nxca1         117 HLRPGDKVLDLGTG--SGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---S----LE---AALPFG  183 (254)
T ss_dssp             HCCTTCEEEEETCT--TSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---C----HH---HHGGGC
T ss_pred             hcCccCEEEEcccc--hhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---c----cc---cccccc
Confidence            35799999999983  355665544 478999999999997777653    3432 22221   1    11   123346


Q ss_pred             cccEEEeCCCc----cchHHHHhccccCCEEEEEee
Q 019049          221 GVDVLYDPVGG----KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       221 ~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      .||+|+.....    ..+..+.+.|+|+|++++.|.
T Consensus       184 ~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         184 PFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            89999865543    234667799999999998654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.81  E-value=0.0031  Score=51.31  Aligned_cols=84  Identities=17%  Similarity=0.248  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhH-HHH-HhcCCcE---EEeCCCCCc-hhhHHHHHHHh-
Q 019049          147 LSSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKI-KFL-KSLGVDH---VVDLSNESV-IPSVKEFLKAR-  217 (347)
Q Consensus       147 ~~~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~-~~~g~~~---v~~~~~~~~-~~~~~~~~~~~-  217 (347)
                      +-.|+++||.|++  .++|.+.++.+...|++|+.+.++.++. +.+ ++++...   ..|..+++- ....+.+.+.. 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            3478999999964  4699999999999999999999887765 333 3455322   222222211 11122233322 


Q ss_pred             cCCcccEEEeCCC
Q 019049          218 KLKGVDVLYDPVG  230 (347)
Q Consensus       218 ~~~~~d~v~d~~g  230 (347)
                      ..+.+|++++++|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence            2456899999987

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.80  E-value=0.0043  Score=44.56  Aligned_cols=53  Identities=25%  Similarity=0.318  Sum_probs=32.0

Q ss_pred             EEEEecCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHhcCCcEEEeCCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLKSLGVDHVVDLSNE  204 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~  204 (347)
                      +|.|.|++|.+|...++.... .+.++.+.....+........+++.++|.+.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHP   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccH
Confidence            689999999999998887655 46677665533332232322333444444433

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.79  E-value=0.0061  Score=44.89  Aligned_cols=82  Identities=24%  Similarity=0.238  Sum_probs=58.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +|.++|+ |.+|.+.++-+...| .+|++.++++++.+.+++ +|... .+. ....             ...|+||-|+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~-~~~v-------------~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SAT-LPEL-------------HSDDVLILAV   65 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESS-CCCC-------------CTTSEEEECS
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccc-cccc-------------cccceEEEec
Confidence            5889999 999998877444445 799999999998887764 66543 222 2222             3579999998


Q ss_pred             CccchHHHHhccccCCEEEE
Q 019049          230 GGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~  249 (347)
                      ....+...+.-+++.+.++.
T Consensus        66 kP~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          66 KPQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             CHHHHHHHHTTCCCTTCEEE
T ss_pred             CHHHHHHhHHHHhhcccEEe
Confidence            87667777777777666553

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.74  E-value=0.0021  Score=51.40  Aligned_cols=93  Identities=18%  Similarity=0.198  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+.++.+||=.|+  |.|..+..+++ .|++|++++.+++..+.+++.+....+..+..++.         ...+.||+|
T Consensus        39 ~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~---------~~~~~fD~i  106 (246)
T d2avna1          39 YLKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP---------FPSGAFEAV  106 (246)
T ss_dssp             HCCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC---------SCTTCEEEE
T ss_pred             hcCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccccccccccccccccccc---------cccccccce
Confidence            3557789998888  46888887776 59999999999999999998776666654443320         123679998


Q ss_pred             EeCCCc--------cchHHHHhccccCCEEEEE
Q 019049          226 YDPVGG--------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       226 ~d~~g~--------~~~~~~~~~l~~~G~~v~~  250 (347)
                      +.....        ..+..+.++|+++|.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            865431        2356788999999988764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.67  E-value=0.0029  Score=52.02  Aligned_cols=102  Identities=20%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEF  213 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~  213 (347)
                      +...+.+.++.+||=+|+  |.|..+..+++..|++|++++.++...+.+++    .|..   .+...+..++.      
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~------  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP------  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS------
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc------
Confidence            345678899999999998  35777788888889999999999987766643    3422   22322222210      


Q ss_pred             HHHhcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEeec
Q 019049          214 LKARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                         ...+.||+|+-.-.     +  ..+..+.++|+|+|++++....
T Consensus       131 ---~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         131 ---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             ---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ---ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence               12357999975432     1  3467888999999999887543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0077  Score=45.61  Aligned_cols=37  Identities=22%  Similarity=0.238  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ....++|+|+|+ |+.|+.++..+...|.+|++++..+
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345789999999 9999999999999999999999865

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0015  Score=54.65  Aligned_cols=100  Identities=15%  Similarity=0.166  Sum_probs=66.3

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHh----cC-----------CcE--EEeCC
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKS----LG-----------VDH--VVDLS  202 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~----~g-----------~~~--v~~~~  202 (347)
                      ...++++||++||=.|+  |.|.++..+|+..|.  +|+.++.+++..+.+++    ++           .+.  +...+
T Consensus        91 l~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          91 LSMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            46789999999999987  458899999998864  89999999988777643    11           111  11111


Q ss_pred             CCCchhhHHHHHHHhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEE
Q 019049          203 NESVIPSVKEFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~  250 (347)
                      -.+.   ..    ......||.||--...  ..+..+.+.|+|+|+++.+
T Consensus       169 i~~~---~~----~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~  211 (324)
T d2b25a1         169 ISGA---TE----DIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVY  211 (324)
T ss_dssp             TTCC---C-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEE
T ss_pred             hhhc---cc----ccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEE
Confidence            1111   00    0123468887744444  4678999999999999976

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.60  E-value=0.0043  Score=47.45  Aligned_cols=98  Identities=20%  Similarity=0.268  Sum_probs=64.7

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ...++++|++||=.|+  |.|..++.+|+. +.+|++++.+++..+.++    +.|.. .+ .....+.    ...  ..
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~gda----~~~--~~   96 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGDA----PEA--LC   96 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESCH----HHH--HT
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEECch----hhc--cc
Confidence            4578899999999987  345666666664 669999999998777664    35532 21 1111121    111  12


Q ss_pred             cCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~  250 (347)
                      ....||.++...+.    +.+..+.+.|+++|+++..
T Consensus        97 ~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_          97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            34679998865443    3456778999999998865

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.59  E-value=0.0028  Score=50.23  Aligned_cols=100  Identities=17%  Similarity=0.236  Sum_probs=67.5

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc--EEEeCCCCCchhhHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~  214 (347)
                      +.+.++++++++||=+|+ | .|..+..+++ .|++|++++.+++-.+.+++    .+..  .+...+..++        
T Consensus         7 ll~~~~l~~~~rVLDiGc-G-~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l--------   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT-G-GGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM--------   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC-T-TCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC--------
T ss_pred             HHHhcCCCCcCEEEEecc-c-CcHHHHHHHH-hCCEEEEEECCHHHHhhhhhcccccccccccccccccccc--------
Confidence            347789999999999998 3 5666666664 57899999999887666643    4432  2222222221        


Q ss_pred             HHhcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEee
Q 019049          215 KARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      . ...+.||+|+..-.     +  ..+.++.++|+|+|+++....
T Consensus        76 ~-~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          76 P-FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             C-SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             c-ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            0 12357999986543     2  346788999999999998653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.59  E-value=0.0048  Score=49.98  Aligned_cols=80  Identities=14%  Similarity=0.177  Sum_probs=50.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HH-H---H-hcCCcEEEeC----CCCCchhhHHHHHHHh--cC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KF-L---K-SLGVDHVVDL----SNESVIPSVKEFLKAR--KL  219 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~-~---~-~~g~~~v~~~----~~~~~~~~~~~~~~~~--~~  219 (347)
                      ..||+|+++++|.+.+..+...|++|+.++++.++. +. +   . ..+.......    .+.+..+...++.+..  ..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            569999999999999999999999999999886543 22 2   2 2333332221    1112222232322211  12


Q ss_pred             CcccEEEeCCCc
Q 019049          220 KGVDVLYDPVGG  231 (347)
Q Consensus       220 ~~~d~v~d~~g~  231 (347)
                      +.+|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (266)
T d1mxha_          83 GRCDVLVNNASA   94 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999883

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.54  E-value=0.0024  Score=50.65  Aligned_cols=73  Identities=21%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+|||.||+|.+|..++..+...|.  .|+.+.+++++.+.... +.. ++..+..+    .+...+..  .++|.++.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~~~----~~~~~~~~--~~~d~vi~~   75 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDITD----ADSINPAF--QGIDALVIL   75 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCTTS----HHHHHHHH--TTCSEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeeecc----cccccccc--ccceeeEEE
Confidence            5899999999999999999988886  56777787765543322 222 22222222    23333333  468999988


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      ++.
T Consensus        76 a~~   78 (252)
T d2q46a1          76 TSA   78 (252)
T ss_dssp             CCC
T ss_pred             Eee
Confidence            764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.046  Score=41.66  Aligned_cols=39  Identities=21%  Similarity=0.373  Sum_probs=35.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      ++|.|+|+ |.+|...++++...|++|++.+.+++.++.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            58999999 9999999999999999999999999866544

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0032  Score=49.55  Aligned_cols=105  Identities=20%  Similarity=0.254  Sum_probs=72.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ...+..+.++||-+|.  +.|..++.+|+.+  +.+|+.++.+++..+.++    ..|....+.....+..+...+....
T Consensus        53 ~L~~~~~~k~vLEiGt--~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~  130 (219)
T d2avda1          53 NLARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA  130 (219)
T ss_dssp             HHHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred             HHHHccCCCeEEEEec--hhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhh
Confidence            4566667789999996  6788888888876  569999999998766664    3454433333334443334444444


Q ss_pred             hcCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049          217 RKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~  249 (347)
                      .....||.||--...    ..++.++++|+++|.++.
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEE
Confidence            445679999855443    346788999999999986

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.43  E-value=0.0029  Score=53.52  Aligned_cols=46  Identities=33%  Similarity=0.358  Sum_probs=39.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  191 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~  191 (347)
                      -+.+|++|||+|++|-+|..++..+...|++|++++++.++...++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            3578999999999999999999888888999999999887665553

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.43  E-value=0.006  Score=51.04  Aligned_cols=76  Identities=18%  Similarity=0.239  Sum_probs=48.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEec-----ChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-----GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      +|||+||+|-+|..++..+...|++|++++.     ..++...+...+--.++..+-.+    .+.+.+...+.++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~----~~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN----KNDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC----HHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCC----HHHHHHHHHhcCCceEE
Confidence            7999999999999999988888999999863     11233444444432333322222    22333333334679999


Q ss_pred             eCCCc
Q 019049          227 DPVGG  231 (347)
Q Consensus       227 d~~g~  231 (347)
                      .+++.
T Consensus        78 h~aa~   82 (338)
T d1orra_          78 HLAGQ   82 (338)
T ss_dssp             ECCCC
T ss_pred             eeccc
Confidence            98863

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.40  E-value=0.0083  Score=44.12  Aligned_cols=84  Identities=19%  Similarity=0.271  Sum_probs=63.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|.++|+ |-+|.+.+.-+...|.++++..+++++.+.+ +++|...+-     +    .++..     ...|+||-|+.
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~----~~~~~-----~~~dvIilavk   66 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM-----S----HQDLI-----DQVDLVILGIK   66 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS-----S----HHHHH-----HTCSEEEECSC
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec-----h----hhhhh-----hccceeeeecc
Confidence            5789999 9999998887777789999999999887776 467754321     1    22222     25799999998


Q ss_pred             ccchHHHHhccccCCEEEEE
Q 019049          231 GKLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~  250 (347)
                      ...+...+..++++..++.+
T Consensus        67 p~~~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          67 PQLFETVLKPLHFKQPIISM   86 (152)
T ss_dssp             GGGHHHHHTTSCCCSCEEEC
T ss_pred             hHhHHHHhhhcccceeEecc
Confidence            87888888888888777654

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0031  Score=50.08  Aligned_cols=97  Identities=15%  Similarity=0.123  Sum_probs=63.7

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc--EEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+|.+||-+|+  |.|..+..+++..+.+|++++.+++-.+.+++....  ..+.....+    ............||.+
T Consensus        52 ~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~fD~i  125 (229)
T d1zx0a1          52 SKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL----WEDVAPTLPDGHFDGI  125 (229)
T ss_dssp             TTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESC----HHHHGGGSCTTCEEEE
T ss_pred             cCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhccccccccccc----ccccccccccccccce
Confidence            57889999997  567788888887777999999999988888653311  011111111    2233333345678887


Q ss_pred             E-eCCCcc-----------chHHHHhccccCCEEEEE
Q 019049          226 Y-DPVGGK-----------LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       226 ~-d~~g~~-----------~~~~~~~~l~~~G~~v~~  250 (347)
                      + |+....           .+..+.+.|+|||+++..
T Consensus       126 ~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         126 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             eecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            4 655431           335678899999999864

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.26  E-value=0.0084  Score=46.26  Aligned_cols=79  Identities=27%  Similarity=0.366  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|+|.|. |.+|..+++++...|++|++.+.+.++......+|+..+ .  ..++           -...+|+++=|
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~--~~~~-----------~~~~~DI~iPc   90 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-A--LEDV-----------LSTPCDVFAPC   90 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-C--GGGG-----------GGCCCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-C--cccc-----------ccccceeeecc
Confidence            6889999999 999999999999999999999999998888888886543 1  1111           12467888866


Q ss_pred             CCcc-chHHHHhccc
Q 019049          229 VGGK-LTKESLKLLN  242 (347)
Q Consensus       229 ~g~~-~~~~~~~~l~  242 (347)
                      ..+. ........++
T Consensus        91 A~~~~I~~~~a~~i~  105 (201)
T d1c1da1          91 AMGGVITTEVARTLD  105 (201)
T ss_dssp             SCSCCBCHHHHHHCC
T ss_pred             cccccccHHHHhhhh
Confidence            6543 3344445443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.25  E-value=0.08  Score=38.42  Aligned_cols=94  Identities=14%  Similarity=0.098  Sum_probs=61.1

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH-hcCCc-ccEEEeC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA-RKLKG-VDVLYDP  228 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~~-~d~v~d~  228 (347)
                      ++|.|+|+.|.+|...+..++..|++|.+.+++..........+++.++.......   ...+... ..... =.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINL---TLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGG---HHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhh---heeeeecccccccCCceEEEe
Confidence            58999996699999999999999999999999887666666667777776555433   2222222 21111 1477888


Q ss_pred             CCc--cchHHHHhccccCCEEEE
Q 019049          229 VGG--KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       229 ~g~--~~~~~~~~~l~~~G~~v~  249 (347)
                      ++.  +..+.+.+.+.  ++++.
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~v~  107 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAVLG  107 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEEEE
T ss_pred             cccCHHHHHHHHHHcc--CCEEE
Confidence            764  23344444332  35543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.20  E-value=0.034  Score=42.20  Aligned_cols=40  Identities=23%  Similarity=0.144  Sum_probs=35.3

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      =++|.|+|+ |.+|...++++...|++|++.+.+++.++.+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            467999999 9999999989989999999999998876554

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0083  Score=47.45  Aligned_cols=117  Identities=15%  Similarity=0.097  Sum_probs=70.0

Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCcE------------E
Q 019049          132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVDH------------V  198 (347)
Q Consensus       132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~~------------v  198 (347)
                      .+.+..+  +.....+.++.+||..|+  |.|..+..+++ .|++|++++.+++-.+.+++. +...            .
T Consensus        30 ~~~l~~~--~~~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~  104 (229)
T d2bzga1          30 HQLLKKH--LDTFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKV  104 (229)
T ss_dssp             CHHHHHH--HHHHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEE
T ss_pred             CHHHHHH--HHHhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccce
Confidence            3444444  234566788999999999  34777777765 699999999999988877642 2111            1


Q ss_pred             EeCCCCCchhhHHHHHH--HhcCCcccEEEeCCCc---------cchHHHHhccccCCEEEEEeec
Q 019049          199 VDLSNESVIPSVKEFLK--ARKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       199 ~~~~~~~~~~~~~~~~~--~~~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      .........-....+..  ......+|+|+++..-         ..+..+.++|+|+|++++....
T Consensus       105 ~~~~~~~v~~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~  170 (229)
T d2bzga1         105 FKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS  170 (229)
T ss_dssp             EEETTSSEEEEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             eeecCCcEEEEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence            00000000000000011  1123568999986542         1346788999999998876544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.15  E-value=0.0088  Score=44.43  Aligned_cols=85  Identities=16%  Similarity=0.191  Sum_probs=61.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|.|+|. |.+|...+.-+...|++|++.++++++.+.+++.++...   .  +    .++..     ...|++|-|+.+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~---~--~----~~e~~-----~~~d~ii~~v~~   66 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA---S--T----AKAIA-----EQCDVIITMLPN   66 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC---S--S----HHHHH-----HHCSEEEECCSS
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc---c--c----HHHHH-----hCCCeEEEEcCC
Confidence            5889999 999999998888899999999999999999988886432   1  1    22222     246888888875


Q ss_pred             -cchH-------HHHhccccCCEEEEEe
Q 019049          232 -KLTK-------ESLKLLNWGAQILVIG  251 (347)
Q Consensus       232 -~~~~-------~~~~~l~~~G~~v~~g  251 (347)
                       +...       .++..++++-.++.++
T Consensus        67 ~~~v~~v~~~~~~~~~~~~~g~iiid~s   94 (161)
T d1vpda2          67 SPHVKEVALGENGIIEGAKPGTVLIDMS   94 (161)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHHhCCcchhhccCCCCEEEECC
Confidence             2222       2445666666666654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.13  E-value=0.0066  Score=48.84  Aligned_cols=35  Identities=20%  Similarity=0.470  Sum_probs=31.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +.|||+|+++++|.+.++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            45899999999999999999999999999998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.04  E-value=0.0049  Score=42.63  Aligned_cols=38  Identities=29%  Similarity=0.439  Sum_probs=33.4

Q ss_pred             CCCC-CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          147 LSSG-QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       147 ~~~~-~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +.++ .+|.|.|+ |-+|.+.++.++.+|.++++.+.+++
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3444 47999999 99999999999999999999998765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.00  E-value=0.035  Score=40.30  Aligned_cols=98  Identities=17%  Similarity=0.237  Sum_probs=65.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChh--h-HHHHHhcCCcEEEeCCCCCchh--------------hHH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAE--K-IKFLKSLGVDHVVDLSNESVIP--------------SVK  211 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~--------------~~~  211 (347)
                      ++|.|.|+||.+|..+.++.+..  .++|++++.+..  + .+.++++....+.-.+......              ..+
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            78999999999999999999876  468887776544  2 2445678877766544322100              111


Q ss_pred             HHHHHhcCCcccEEEeCC-CccchHHHHhccccCCEEEE
Q 019049          212 EFLKARKLKGVDVLYDPV-GGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       212 ~~~~~~~~~~~d~v~d~~-g~~~~~~~~~~l~~~G~~v~  249 (347)
                      .+.+. ....+|+++.+. |...+.-.+.+++.+-++.+
T Consensus        83 ~l~~~-~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          83 ALVEA-AMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             HHHHH-HTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             chhee-cccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence            12222 234689998885 44778888888888877765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.96  E-value=0.0075  Score=50.96  Aligned_cols=77  Identities=16%  Similarity=0.234  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HHhc----CCcEEE-eCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKSL----GVDHVV-DLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-~~~~----g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      .|++|||+||+|-+|..+++.+...|++|++++++..+... .+..    +...+. |..+      ...+.+......+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d------~~~l~~~~~~~~~   80 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD------QNKLLESIREFQP   80 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC------HHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccC------hHhhhhhhhhchh
Confidence            57899999999999999999999999999999987653221 1211    222221 2222      2233333334467


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+++.+++.
T Consensus        81 ~~v~~~aa~   89 (356)
T d1rkxa_          81 EIVFHMAAQ   89 (356)
T ss_dssp             SEEEECCSC
T ss_pred             hhhhhhhcc
Confidence            888888764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.94  E-value=0.0035  Score=50.03  Aligned_cols=37  Identities=30%  Similarity=0.338  Sum_probs=33.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      ++++||+|+++++|.+.++.+...|++|+++++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            4789999999999999999999999999999987653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.89  E-value=0.0072  Score=46.27  Aligned_cols=40  Identities=23%  Similarity=0.266  Sum_probs=35.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  191 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~  191 (347)
                      +|.|+||+|++|.+.++.+...|++|++..+++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            5889987799999999999999999999999998876663

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.88  E-value=0.02  Score=38.28  Aligned_cols=72  Identities=18%  Similarity=0.228  Sum_probs=51.7

Q ss_pred             CCCCCCEEEEecCCchHHHHH-HHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAA-VQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~-~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      .++..+++.+.|- |++|..+ +++++..|++|.+.+.... ..+.+++.|......+.....             .+.|
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i-------------~~~d   69 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHI-------------EGAS   69 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGG-------------TTCS
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccC-------------CCCC
Confidence            3566789999999 8899776 8999999999999998643 456667788764443332221             3578


Q ss_pred             EEEeCCCc
Q 019049          224 VLYDPVGG  231 (347)
Q Consensus       224 ~v~d~~g~  231 (347)
                      .++-+.+-
T Consensus        70 ~vV~S~AI   77 (96)
T d1p3da1          70 VVVVSSAI   77 (96)
T ss_dssp             EEEECTTS
T ss_pred             EEEECCCc
Confidence            88776653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.88  E-value=0.022  Score=43.65  Aligned_cols=85  Identities=24%  Similarity=0.266  Sum_probs=60.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..++++++.+|++|++.++......  ...+..      ..+    .++++.     ..|++..+
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~~~~~~------~~~----l~~~l~-----~sDii~~~  103 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPEL--EKKGYY------VDS----LDDLYK-----QADVISLH  103 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH--HHTTCB------CSC----HHHHHH-----HCSEEEEC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCccccccc--ccceee------ecc----cccccc-----cccccccc
Confidence            3789999999 99999999999999999999987654322  222211      112    344443     46888887


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.-     ..+ ...++.|+++..++.++
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         104 VPDVPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             CCccccccccccHHHHhhhCCccEEEecC
Confidence            762     122 67889999998888764

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.83  E-value=0.012  Score=46.08  Aligned_cols=92  Identities=14%  Similarity=0.115  Sum_probs=61.2

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC-cEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      +.++.+||=+|+  |.|..+..+++ .|++|++++.+++-.+.+++    .+. ...+..+..+..         .....
T Consensus        35 l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~---------~~~~~  102 (226)
T d1ve3a1          35 MKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS---------FEDKT  102 (226)
T ss_dssp             CCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC---------SCTTC
T ss_pred             cCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccccc---------ccCcC
Confidence            578889999998  34777777776 58999999999987777753    332 222222222210         12357


Q ss_pred             ccEEEeCCCc---------cchHHHHhccccCCEEEEE
Q 019049          222 VDVLYDPVGG---------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       222 ~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~  250 (347)
                      ||+|+....-         ..+..+.+.|+|+|++++.
T Consensus       103 fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         103 FDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            8998754331         1356788999999998764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.033  Score=44.99  Aligned_cols=93  Identities=11%  Similarity=0.046  Sum_probs=66.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHhcCCcc
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ..++.+||=+|+  |.|..+..+++.. +.++++++.++.-.+.+++.... ...  |..+..+           ....|
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~-----------~~~sf  148 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF-----------SDTSM  148 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB-----------CTTCE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccC-----------CCCCE
Confidence            356779998887  4567777777765 67999999999988888764322 222  2222222           24569


Q ss_pred             cEEEeCCCccchHHHHhccccCCEEEEEee
Q 019049          223 DVLYDPVGGKLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       223 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      |+|+.......+.++.+.|+|+|.++....
T Consensus       149 D~v~~~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         149 DAIIRIYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             EEEEEESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEeecCCHHHHHHHHHHhCCCcEEEEEee
Confidence            999977666778899999999999998753

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.74  E-value=0.026  Score=44.92  Aligned_cols=96  Identities=11%  Similarity=0.173  Sum_probs=63.7

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EEEeCCCCCchhhHHHHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLK  215 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~  215 (347)
                      +.......+.++||=.|+ | .|..+..+++ .|++|++++.+++-.+.+++    .+.. .++..+-.++         
T Consensus        33 ~~~~~~~~~~~~iLDiGc-G-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l---------  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC-G-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI---------  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC-T-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC---------
T ss_pred             HHHHhcCCCCCEEEEeCC-C-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc---------
Confidence            334556677889999998 3 3777777666 68999999999987776654    2322 2332221111         


Q ss_pred             HhcCCcccEEEeCCCc----------cchHHHHhccccCCEEEE
Q 019049          216 ARKLKGVDVLYDPVGG----------KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       216 ~~~~~~~d~v~d~~g~----------~~~~~~~~~l~~~G~~v~  249 (347)
                       .-...||+|+...+.          ..+..+.++|+|+|.++.
T Consensus       101 -~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         101 -AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             -CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             123579999876432          135668899999998876

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.69  E-value=0.024  Score=48.55  Aligned_cols=104  Identities=20%  Similarity=0.282  Sum_probs=67.0

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhc-----------C----CcEEEeCCCC
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-----------G----VDHVVDLSNE  204 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~-----------g----~~~v~~~~~~  204 (347)
                      +....++++|++++=+|+  |.|..+.++|+..|+ +|++++.++...+.+++.           |    ... +.....
T Consensus       208 Il~~l~Lkpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~-~~~~~~  284 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGS--GVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE-FSLKKS  284 (406)
T ss_dssp             HHHHTTCCTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE-EEESSC
T ss_pred             HHHHhCCCCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccce-eeeeec
Confidence            347788999999888886  789999999999987 899999998876666431           1    111 111111


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeC-C--Cc---cchHHHHhccccCCEEEEEe
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDP-V--GG---KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~-~--g~---~~~~~~~~~l~~~G~~v~~g  251 (347)
                      .. . .......  ...+|+++-. .  +.   ..+.++.+.|++||+++...
T Consensus       285 f~-~-~~~~d~~--~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         285 FV-D-NNRVAEL--IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             ST-T-CHHHHHH--GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             hh-h-ccccccc--cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            11 0 0111111  1356777642 2  11   24567889999999998753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.69  E-value=0.04  Score=36.08  Aligned_cols=66  Identities=18%  Similarity=0.289  Sum_probs=48.2

Q ss_pred             EEEEecCCchHHHHH-HHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAA-VQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~-~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +|-+.|- |++|..+ +++++..|+.|.+.+..+. ..+.+++.|+......+...+             .+.|.|+-+.
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i-------------~~~d~vV~Ss   68 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW-------------YDPDLVIKTP   68 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC-------------CCCSEEEECT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc-------------CCCCEEEEec
Confidence            5777788 8889865 7899999999999998763 456778899865444333333             4678888766


Q ss_pred             Cc
Q 019049          230 GG  231 (347)
Q Consensus       230 g~  231 (347)
                      +-
T Consensus        69 AI   70 (89)
T d1j6ua1          69 AV   70 (89)
T ss_dssp             TC
T ss_pred             Cc
Confidence            63

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.67  E-value=0.019  Score=48.02  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=30.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      +++||+||+|-+|..++..+...|++|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            589999999999999999999999999999974

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.65  E-value=0.011  Score=48.31  Aligned_cols=32  Identities=22%  Similarity=0.146  Sum_probs=28.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +||+|+++++|.+.++.+...|++|+++.++.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~   36 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   36 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            58999999999999999999999999877654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.65  E-value=0.031  Score=41.33  Aligned_cols=45  Identities=13%  Similarity=0.132  Sum_probs=39.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD  196 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~  196 (347)
                      ++|.++|. |-+|...+.-+...|++|++.++++++.+.+...++.
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcc
Confidence            36899999 9999998888888899999999999999988888754

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.58  E-value=0.022  Score=44.71  Aligned_cols=105  Identities=18%  Similarity=0.274  Sum_probs=71.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ...+..+.++||-+|.  ..|..++.+|+.+  +.+|+.++.+++..+.+++    .|...-+.....+..+.++++...
T Consensus        53 ~L~~~~~~k~iLEiGT--~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~  130 (227)
T d1susa1          53 MLLKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKD  130 (227)
T ss_dssp             HHHHHHTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred             HHHHhcCCCcEEEecc--hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhc
Confidence            3455567789999995  6788888888876  4699999999987766643    565444444444443333333322


Q ss_pred             h-cCCcccEEEe-CCCc---cchHHHHhccccCCEEEE
Q 019049          217 R-KLKGVDVLYD-PVGG---KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       217 ~-~~~~~d~v~d-~~g~---~~~~~~~~~l~~~G~~v~  249 (347)
                      - ..+.||.||- +--.   ..++.++.+++++|.++.
T Consensus       131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~  168 (227)
T d1susa1         131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGY  168 (227)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEE
T ss_pred             cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEE
Confidence            1 2457999874 4333   356788999999999886

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.58  E-value=0.007  Score=42.33  Aligned_cols=39  Identities=21%  Similarity=0.336  Sum_probs=34.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ..++..++|+|.|+ |.+|+-+++.++.+|.+|+++.+.+
T Consensus        17 ~~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             hccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            34556789999999 9999999999999999999999864

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.018  Score=48.69  Aligned_cols=34  Identities=24%  Similarity=0.274  Sum_probs=29.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +.|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999999988999999999854

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.57  E-value=0.011  Score=48.03  Aligned_cols=33  Identities=21%  Similarity=0.222  Sum_probs=30.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +|||+||+|-+|..++..++..|++|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            599999999999999999999999999998753

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.53  E-value=0.021  Score=42.95  Aligned_cols=44  Identities=14%  Similarity=0.114  Sum_probs=38.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV  195 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~  195 (347)
                      .+|.|+|. |.||...+.-+...|++|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcc
Confidence            36899999 999999999888899999999999999988876553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.50  E-value=0.024  Score=48.56  Aligned_cols=32  Identities=22%  Similarity=0.230  Sum_probs=29.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA  181 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~  181 (347)
                      |.+|||+|++|-+|..++..+...|++|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            67999999999999999999999999999986

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.47  E-value=0.013  Score=44.35  Aligned_cols=82  Identities=23%  Similarity=0.298  Sum_probs=59.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...+++++.+|++|++.++.+.+       +....    ..++    +++.     ...|+|+.+
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~-------~~~~~----~~~l----~ell-----~~sDiv~~~   99 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE-------GPWRF----TNSL----EEAL-----REARAAVCA   99 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC-------SSSCC----BSCS----HHHH-----TTCSEEEEC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc-------cceee----eech----hhhh-----hccchhhcc
Confidence            4789999999 999999999999999999999986531       11111    1122    2222     467899887


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.-     ..+ ...+..|+++..++.++
T Consensus       100 ~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         100 LPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             cccccccccccccceeeeccccceEEecc
Confidence            753     122 67889999999998875

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.43  E-value=0.021  Score=39.86  Aligned_cols=42  Identities=14%  Similarity=0.223  Sum_probs=37.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +.....++++|+|.|+ |.+|+-+++.++.+|.+|+++.+.+.
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4566778999999999 99999999999999999999998653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.43  E-value=0.01  Score=42.20  Aligned_cols=73  Identities=18%  Similarity=0.165  Sum_probs=49.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  231 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~  231 (347)
                      +|.|+|++|.+|.+..+++...+.+++.......                 ...             -..+|+++|++..
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-----------------~~~-------------~~~~DVvIDFS~p   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-----------------VEE-------------LDSPDVVIDFSSP   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-----------------EEE-------------CSCCSEEEECSCG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-----------------HHH-------------hccCCEEEEecCH
Confidence            5899999999999999999988988765432111                 000             1356888888887


Q ss_pred             cchHHHHhccccCCEEEEEeecC
Q 019049          232 KLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +.+...++.....+.=+.+|..+
T Consensus        52 ~~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          52 EALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             GGHHHHHHHHHHHTCEEEECCCS
T ss_pred             HHHHHHHHHHHhcCCCEEEEcCC
Confidence            77666665555555555566544

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.42  E-value=0.0052  Score=50.70  Aligned_cols=100  Identities=11%  Similarity=0.113  Sum_probs=62.1

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEE---EeCCCCCchhhHHHHHHH
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHV---VDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v---~~~~~~~~~~~~~~~~~~  216 (347)
                      ..+.+++++||=+|+  |.|..+..+++. |++|++++.+++-++.+++    .+....   .+....++   ...-...
T Consensus        51 ~l~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  124 (292)
T d1xvaa_          51 LLRQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW---LTLDKDV  124 (292)
T ss_dssp             HHHHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG---GGHHHHS
T ss_pred             HhhhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccc---ccccccc
Confidence            344567789999998  457777787764 8999999999987766643    221100   00111122   1111122


Q ss_pred             hcCCcccEEEeCCCc---------------cchHHHHhccccCCEEEE
Q 019049          217 RKLKGVDVLYDPVGG---------------KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~---------------~~~~~~~~~l~~~G~~v~  249 (347)
                      .....||.|+.....               ..++.+.+.|+|+|.+++
T Consensus       125 ~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         125 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             CCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            234679988864321               146788899999999886

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.41  E-value=0.03  Score=42.72  Aligned_cols=87  Identities=22%  Similarity=0.300  Sum_probs=60.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|...+++++.+|++|++.++...+ +.....+....     .+    .+++..     ..|+|.-+
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~~~~~~~~-----~~----l~~ll~-----~sD~i~~~  111 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVERALGLQRV-----ST----LQDLLF-----HSDCVTLH  111 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHHHHTCEEC-----SS----HHHHHH-----HCSEEEEC
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCcccc-cchhhhccccc-----cc----hhhccc-----cCCEEEEe
Confidence            5789999999 999999999999999999999876542 22233333211     11    444443     35888776


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.-     ..+ ...++.|+++..++.++
T Consensus       112 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         112 CGLNEHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             CCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             ecccccchhhhhHHHHhccCCCCeEEecC
Confidence            652     122 56789999999888764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.40  E-value=0.03  Score=43.96  Aligned_cols=100  Identities=17%  Similarity=0.265  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ....++||++||=.|+  +.|..+..+++..|  .+|++++.++...+.+++    .+....+..+....    ... . 
T Consensus        67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~----~~~-~-  138 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP----EEY-R-  138 (227)
T ss_dssp             CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG----GGG-T-
T ss_pred             cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc----ccc-c-
Confidence            4567899999999998  45888899999876  489999999987776643    22222222222211    000 0 


Q ss_pred             hcCCcccEEEeCCCc-----cchHHHHhccccCCEEEEE
Q 019049          217 RKLKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~  250 (347)
                      .....+|+++.....     ..+..+.+.|+++|+++++
T Consensus       139 ~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         139 ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            112468888765543     2457788999999998875

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.40  E-value=0.038  Score=45.17  Aligned_cols=36  Identities=19%  Similarity=0.290  Sum_probs=31.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +.++|||+||+|-+|..++..+...|.+|++++++.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            345799999999999999999988999999999864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.38  E-value=0.048  Score=41.21  Aligned_cols=86  Identities=23%  Similarity=0.264  Sum_probs=61.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .++++.|.|. |.+|...+++++.+|.+|++.++...+. .....+....      +    .++++.     ..|+|.-+
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~-~~~~~~~~~~------~----l~ell~-----~sDiv~~~  105 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA-RAAQLGIELL------S----LDDLLA-----RADFISVH  105 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH-HHHHHTCEEC------C----HHHHHH-----HCSEEEEC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh-HHhhcCceec------c----HHHHHh-----hCCEEEEc
Confidence            4789999999 9999999999999999999999765433 2333343211      1    344443     45888877


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ++-     ..+ ...++.|+++..++.++
T Consensus       106 ~Plt~~T~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         106 LPKTPETAGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             CCCCchhhhhhhHHHHhhhCCCceEEEec
Confidence            652     123 67889999998888764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.34  E-value=0.045  Score=41.64  Aligned_cols=87  Identities=16%  Similarity=0.110  Sum_probs=60.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      |+++.|+|. |.+|...+++++.+|.+|++.++...........+...   .  .+    .+++..     ..|+|..++
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~---~--~~----l~~ll~-----~sD~v~l~~  111 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF---H--DS----LDSLLS-----VSQFFSLNA  111 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE---C--SS----HHHHHH-----HCSEEEECC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcccccc---c--CC----HHHHHh-----hCCeEEecC
Confidence            789999999 99999999999999999999987654333333332211   1  11    334443     458887766


Q ss_pred             Cc-----cch-HHHHhccccCCEEEEEe
Q 019049          230 GG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      .-     ..+ ...++.|+++..+|.++
T Consensus       112 plt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         112 PSTPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             CCCchHhheecHHHhhCcCCccEEEecC
Confidence            52     223 67889999999888764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.33  E-value=0.0044  Score=49.19  Aligned_cols=75  Identities=20%  Similarity=0.282  Sum_probs=47.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+++|||+||+|.+|...++.+...|.  +|+++++++.+...-........ .|..+      .+.+....  .++|++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~------~~~~~~~~--~~~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYASAF--QGHDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGGGGG--SSCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc------cccccccc--cccccc
Confidence            456999999999999999988877785  89999987643222111112222 12211      12222222  468999


Q ss_pred             EeCCCc
Q 019049          226 YDPVGG  231 (347)
Q Consensus       226 ~d~~g~  231 (347)
                      +.|+|.
T Consensus        85 i~~~~~   90 (232)
T d2bkaa1          85 FCCLGT   90 (232)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999885

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.1  Score=37.69  Aligned_cols=99  Identities=17%  Similarity=0.244  Sum_probs=66.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChh--h-HHHHHhcCCcEEEeCCCCCchh----------------h
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAE--K-IKFLKSLGVDHVVDLSNESVIP----------------S  209 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~----------------~  209 (347)
                      ++|.|.|+||++|..+..+.+..  .++|.+.+.+..  . .+.++++....++-.++..+..                -
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            47999999999999999999987  458877765443  2 2344667777766544322100                0


Q ss_pred             HHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEE
Q 019049          210 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       210 ~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~  249 (347)
                      .+.+.+......+|+|+....+ ..+.-.+.+++.+-++.+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence            1233333444578999988654 778888888888877665

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.057  Score=39.75  Aligned_cols=97  Identities=19%  Similarity=0.142  Sum_probs=68.1

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      ..+|++....+..|....---.|++|+|.|-+..+|.-++.++...|++|+...+...                   +  
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-------------------~--   73 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------------N--   73 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------------C--
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc-------------------h--
Confidence            3466666666655544333347999999999888999999999999999987754322                   1  


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeec
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                        .....     ...|+++-++|.+.+-. -++++++..++.+|..
T Consensus        74 --l~~~~-----~~ADivI~a~G~p~~i~-~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          74 --LRHHV-----ENADLLIVAVGKPGFIP-GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             --HHHHH-----HHCSEEEECSCCTTCBC-TTTSCTTCEEEECCCE
T ss_pred             --hHHHH-----hhhhHhhhhccCccccc-ccccCCCcEEEecCce
Confidence              11111     35699999999754422 3688899999988865

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.25  E-value=0.057  Score=45.23  Aligned_cols=38  Identities=18%  Similarity=0.376  Sum_probs=34.1

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      ..++|+|+||+|.+|..++..+...|++|++++++.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            46799999999999999999999999999999987654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.0063  Score=45.34  Aligned_cols=90  Identities=16%  Similarity=0.079  Sum_probs=56.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc--EEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      +|+|+|+ |.+|.+.+..+...|.+|+++++++++.+.....+.+  ........+.   .+..      ..+|++|-++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~D~iii~v   71 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND---PDFL------ATSDLLLVTL   71 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC---HHHH------HTCSEEEECS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccch---hhhh------cccceEEEee
Confidence            6899999 9999999999999999999999987644332222211  0000000011   1111      3689999999


Q ss_pred             CccchHH----HHhccccCCEEEEEe
Q 019049          230 GGKLTKE----SLKLLNWGAQILVIG  251 (347)
Q Consensus       230 g~~~~~~----~~~~l~~~G~~v~~g  251 (347)
                      .......    +...+.++..++.+.
T Consensus        72 ka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          72 KAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             CGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             cccchHHHHHhhccccCcccEEeecc
Confidence            8754443    445556666666653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.20  E-value=0.049  Score=45.58  Aligned_cols=75  Identities=21%  Similarity=0.213  Sum_probs=46.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh----hhH---HHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcc
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKI---KFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~---~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      +.|||+||+|-+|..++..+...|.+|++++...    +..   .....-+...+. |..+      .+.+.......++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d------~~~l~~~~~~~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD------RKGLEKVFKEYKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC------HHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC------HHHHHHHHhccCC
Confidence            5799999999999999999888999999986421    111   122222333222 2222      2333333333478


Q ss_pred             cEEEeCCCc
Q 019049          223 DVLYDPVGG  231 (347)
Q Consensus       223 d~v~d~~g~  231 (347)
                      |+||.+++.
T Consensus        76 d~VihlAa~   84 (347)
T d1z45a2          76 DSVIHFAGL   84 (347)
T ss_dssp             CEEEECCSC
T ss_pred             CEEEEcccc
Confidence            999998763

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.14  E-value=0.0097  Score=37.94  Aligned_cols=34  Identities=32%  Similarity=0.435  Sum_probs=31.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ++|.|.|+ |-+|.+.++-++.+|.++.+.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            58999999 99999999999999999999997654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.14  E-value=0.062  Score=43.08  Aligned_cols=95  Identities=19%  Similarity=0.197  Sum_probs=63.2

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC---cEEEeCCCCCchhhHHHHHHHh
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ..+++|++||-.++  ++|..++.+|+.-+++|++++.+++..+.+++    .|.   ..++..+..++          .
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~----------~  170 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF----------P  170 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----------C
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh----------c
Confidence            34689999999887  56677777777645699999999998877753    342   23443333332          2


Q ss_pred             cCCcccEEE-eCCC--ccchHHHHhccccCCEEEEEe
Q 019049          218 KLKGVDVLY-DPVG--GKLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 ~~~~~d~v~-d~~g--~~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ....+|.|+ +-..  ...+..+++.++++|.+....
T Consensus       171 ~~~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         171 GENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             CCSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            335688665 3322  245678899999999775543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.13  E-value=0.039  Score=41.42  Aligned_cols=50  Identities=26%  Similarity=0.255  Sum_probs=38.2

Q ss_pred             HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049          139 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  190 (347)
Q Consensus       139 ~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~  190 (347)
                      .+|.+...--+|++|+|.|+ |+.+.+++..+...| +|+++.|+.+|.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence            34444333347889999999 999998887776555 999999999887655

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.12  E-value=0.094  Score=43.59  Aligned_cols=38  Identities=13%  Similarity=0.045  Sum_probs=31.7

Q ss_pred             CCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecChhhH
Q 019049          150 GQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGAEKI  187 (347)
Q Consensus       150 ~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~~~~~  187 (347)
                      ++..||+|+  +.++|.+.++.+...|++|+++.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            567899994  45999999999999999999988766533

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.05  E-value=0.095  Score=38.35  Aligned_cols=91  Identities=14%  Similarity=0.296  Sum_probs=56.6

Q ss_pred             CEEEEecCCchHHH-HHHHHHHHcCC-EEEEEec-Chh--hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          151 QVLLVLGAAGGVGV-AAVQIGKVCGA-TIIAVAR-GAE--KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       151 ~~VlI~g~~g~~G~-~~~~la~~~g~-~V~~~~~-~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      =+|.|+|+ |.+|. ...++++.... +++++++ +.+  ...+++++|.....  .   .   .+.+.+.....++|+|
T Consensus         5 irvaIIGa-G~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--~---~---~d~l~~~~~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--A---G---VEGLIKLPEFADIDFV   75 (157)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--S---H---HHHHHHSGGGGGEEEE
T ss_pred             cEEEEEcC-cHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--c---c---eeeeeecccccccCEE
Confidence            37999995 99987 56788876644 7777654 333  34667788865432  1   1   3444444444679999


Q ss_pred             EeCCCc-cchH--HHHhccccCCEEEEE
Q 019049          226 YDPVGG-KLTK--ESLKLLNWGAQILVI  250 (347)
Q Consensus       226 ~d~~g~-~~~~--~~~~~l~~~G~~v~~  250 (347)
                      |++++. ...+  .+...++.|-.+++.
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~  103 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDL  103 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEc
Confidence            999885 3343  334555555555543

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.04  E-value=0.019  Score=44.82  Aligned_cols=104  Identities=19%  Similarity=0.244  Sum_probs=63.4

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ..+..+.++||-+|.  +.|..++.+|+.+  +.+|+.++.+++..+.++    ..|...-+.....+..+.+..+....
T Consensus        51 lv~~~kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~  128 (214)
T d2cl5a1          51 VIREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY  128 (214)
T ss_dssp             HHHHHCCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHS
T ss_pred             HHHhhCCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcc
Confidence            334445679999996  5677777888775  579999999988766663    35643222223333322233333333


Q ss_pred             cCCcccEEEeCCCccc------hHHHHhccccCCEEEE
Q 019049          218 KLKGVDVLYDPVGGKL------TKESLKLLNWGAQILV  249 (347)
Q Consensus       218 ~~~~~d~v~d~~g~~~------~~~~~~~l~~~G~~v~  249 (347)
                      ....||.+|--.....      +...+++++++|.++.
T Consensus       129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            4567998875433321      3445678999997654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.00  E-value=0.048  Score=41.38  Aligned_cols=88  Identities=18%  Similarity=0.163  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+.++.|.|. |.+|...+++++.+|.+|+..++........+..+....   .  +    ..++.     ...|+|.-+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~---~--~----l~~~l-----~~sD~v~~~  107 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH---A--T----REDMY-----PVCDVVTLN  107 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC---S--S----HHHHG-----GGCSEEEEC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccccccccc---C--C----HHHHH-----Hhccchhhc
Confidence            4789999999 999999999999999999999986655555555553221   1  1    22222     356888776


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.-     ..+ ...+..|+++..++.++
T Consensus       108 ~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         108 CPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             ccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            652     222 67889999888887754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.98  E-value=0.014  Score=44.54  Aligned_cols=86  Identities=12%  Similarity=0.186  Sum_probs=57.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE----e-CCCCCchhhHHHHHHHhcCCcccEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV----D-LSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~----~-~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+|.|+|+ |.+|.+.+.++...|.+|+...++++..+.+.+.+.+..+    . ..+-.+....++..     .+.|++
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEII   81 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSCE
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-----CCCCEE
Confidence            37999999 9999999999988888999999999888877654321110    0 01101111122222     367999


Q ss_pred             EeCCCccchHHHHhccc
Q 019049          226 YDPVGGKLTKESLKLLN  242 (347)
Q Consensus       226 ~d~~g~~~~~~~~~~l~  242 (347)
                      +-+++...+...++.++
T Consensus        82 iiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             EECSCHHHHHHHHHHHC
T ss_pred             EEcCcHHHHHHHHHHHH
Confidence            99999877766665443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.059  Score=44.94  Aligned_cols=74  Identities=14%  Similarity=0.128  Sum_probs=46.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEec----ChhhHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVAR----GAEKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~----~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      +|||+||+|-+|..++..+...|.+|+++++    ........+   .-+...+ ..+-.+    .+.+.+.....++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d----~~~l~~~~~~~~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV-EGDIRN----EALMTEILHDHAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEE-ECCTTC----HHHHHHHHHHTTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEE-EeecCC----HHHHHHHHhccCCCE
Confidence            5999999999999999999999999999874    222222222   2233322 222111    223333333357899


Q ss_pred             EEeCCC
Q 019049          225 LYDPVG  230 (347)
Q Consensus       225 v~d~~g  230 (347)
                      ||.+++
T Consensus        77 ViHlAa   82 (338)
T d1udca_          77 VIHFAG   82 (338)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.90  E-value=0.14  Score=38.80  Aligned_cols=93  Identities=17%  Similarity=0.207  Sum_probs=59.8

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE--EEeCCCCCchhhHHHHHHHhcCC
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH--VVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      +++| +||=+|+ | .|..+..+++ .|++|++++.+++-.+.++    +.|.+.  +...+-...          ....
T Consensus        29 ~~~g-rvLDiGc-G-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~----------~~~~   94 (198)
T d2i6ga1          29 VAPG-RTLDLGC-G-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL----------TFDG   94 (198)
T ss_dssp             SCSC-EEEEETC-T-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC----------CCCC
T ss_pred             CCCC-cEEEECC-C-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc----------cccc
Confidence            4555 8999998 3 7777777765 5899999999998776654    344432  111111111          1135


Q ss_pred             cccEEEeCCC-----c----cchHHHHhccccCCEEEEEeec
Q 019049          221 GVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       221 ~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      .||+|+...-     .    ..++.+.++|+++|.++.....
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1          95 EYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             CEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             cccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            7999986332     1    1446677899999999886543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.11  Score=38.45  Aligned_cols=97  Identities=15%  Similarity=0.121  Sum_probs=69.6

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049          128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  207 (347)
Q Consensus       128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  207 (347)
                      +.+|++....+..|.+..---.|++|+|.|-+..+|.-++.++...|++|+..........                   
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~-------------------   77 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------   77 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH-------------------
Confidence            4567776666666644333347999999999899999999999999999998776432111                   


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeec
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                          +.   +  ...|+++-++|.+.+-. -++++++-.++.+|..
T Consensus        78 ----~~---~--~~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          78 ----EE---V--NKGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ----HH---H--TTCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             ----HH---H--hhccchhhccccccccc-cccccCCCeEeccCcc
Confidence                11   1  36789998888765522 4688999999888754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.86  E-value=0.014  Score=42.86  Aligned_cols=82  Identities=15%  Similarity=0.069  Sum_probs=52.4

Q ss_pred             EEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccc
Q 019049          154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL  233 (347)
Q Consensus       154 lI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  233 (347)
                      -++|. |-+|...++.++..+.-+.+..++.++.+.+.+.+.....+  ..+.            -...|+||-|+.+..
T Consensus         3 gfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~--~~~~------------~~~~DiVil~v~d~~   67 (153)
T d2i76a2           3 NFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAAT--LEKH------------PELNGVVFVIVPDRY   67 (153)
T ss_dssp             EEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCS--SCCC------------CC---CEEECSCTTT
T ss_pred             EEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccc--hhhh------------hccCcEEEEeccchh
Confidence            46788 99999988877553333467899999988887765433322  1121            146799999999888


Q ss_pred             hHHHHhccccCCEE-EEE
Q 019049          234 TKESLKLLNWGAQI-LVI  250 (347)
Q Consensus       234 ~~~~~~~l~~~G~~-v~~  250 (347)
                      +...+..++..+.+ +.+
T Consensus        68 i~~v~~~l~~~~~ivi~~   85 (153)
T d2i76a2          68 IKTVANHLNLGDAVLVHC   85 (153)
T ss_dssp             HHHHHTTTCCSSCCEEEC
T ss_pred             hhHHHhhhcccceeeeec
Confidence            88888877755544 443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.84  E-value=0.041  Score=38.53  Aligned_cols=43  Identities=16%  Similarity=0.244  Sum_probs=35.7

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +.....-.++++|+|.|+ |.+|+-+++.+..+|.+|+++.+.+
T Consensus        21 i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            334444456789999999 9999999999999999999998864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.041  Score=45.43  Aligned_cols=32  Identities=25%  Similarity=0.305  Sum_probs=29.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      ++|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            68999999999999999998889999999875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.79  E-value=0.011  Score=41.71  Aligned_cols=35  Identities=17%  Similarity=0.294  Sum_probs=32.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .++++|+|+ |.+|+-+++++..+|.+|+++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            469999999 99999999999999999999998653

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.78  E-value=0.083  Score=40.74  Aligned_cols=100  Identities=18%  Similarity=0.252  Sum_probs=63.3

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ...++||++||=.|+.  .|..+..+++..+ .+|++++.+++..+.+++    .+-...+..+....    ...  ...
T Consensus        51 ~l~lkpg~~VLDlGcG--~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~----~~~--~~~  122 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAA--SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP----WKY--SGI  122 (209)
T ss_dssp             CCCCCSSCEEEEETCT--TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG----GGT--TTT
T ss_pred             cCCCCCCCEEEEeCCc--CCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCc----ccc--ccc
Confidence            4678999999999983  4667777787765 489999999987766633    33211211111111    000  011


Q ss_pred             CCcccEEEeCCCc-----cchHHHHhccccCCEEEEEe
Q 019049          219 LKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       219 ~~~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ...+|+++.....     ..+.++.+.|+++|+++.+-
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            2357777765442     23577889999999998763

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.77  E-value=0.11  Score=37.76  Aligned_cols=94  Identities=10%  Similarity=0.048  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      +.++++|.|. |.+|..+++.+...|.+|++++.++++.    +.....|...+ ..+..     -...++..+-..+|.
T Consensus         2 ~knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~~-----d~~~L~~a~i~~a~~   74 (153)
T d1id1a_           2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSN-----DSSVLKKAGIDRCRA   74 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTT-----SHHHHHHHTTTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEE-EccCc-----chHHHHHhccccCCE
Confidence            3457999999 9999999999999999999999887643    22233455433 33322     234556666678999


Q ss_pred             EEeCCCccch----HHHHhccccCCEEEE
Q 019049          225 LYDPVGGKLT----KESLKLLNWGAQILV  249 (347)
Q Consensus       225 v~d~~g~~~~----~~~~~~l~~~G~~v~  249 (347)
                      ++-+++++..    ....+.+.+.-+++.
T Consensus        75 vi~~~~~d~~n~~~~~~~r~~~~~~~iia  103 (153)
T d1id1a_          75 ILALSDNDADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred             EEEccccHHHHHHHHHHHHHhCCCCceEE
Confidence            9998887432    223344555555554

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.2  Score=41.50  Aligned_cols=102  Identities=15%  Similarity=0.239  Sum_probs=65.8

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-----------cC----CcEEEeCCCC
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-----------LG----VDHVVDLSNE  204 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-----------~g----~~~v~~~~~~  204 (347)
                      +....+++++++||=.|+  |.|..+.++|+..++ ++++++.+++..+.+++           .|    .-.+...+-.
T Consensus       143 ~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            347788999999999987  678899999999888 79999999987666532           12    1122222211


Q ss_pred             CchhhHHHHHHHhcCCcccEEEeC-CC--c---cchHHHHhccccCCEEEEEe
Q 019049          205 SVIPSVKEFLKARKLKGVDVLYDP-VG--G---KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~d~v~d~-~g--~---~~~~~~~~~l~~~G~~v~~g  251 (347)
                      +.    . ..+..  ..+|+|+-. .-  .   ..+.++++.|++||+++...
T Consensus       221 ~~----~-~~~~~--~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SE----E-WRERI--ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SH----H-HHHHH--HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cc----c-ccccc--CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            11    1 11111  135777632 21  1   23567888999999998753

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.69  E-value=0.023  Score=46.55  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +|+++||+|++|  ++|.+.++.+...|++|+++.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence            688999999866  8999999999999999999988665

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.67  E-value=0.17  Score=38.23  Aligned_cols=96  Identities=20%  Similarity=0.219  Sum_probs=62.3

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc----EEEeCCCCCchhhHHHH
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD----HVVDLSNESVIPSVKEF  213 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~----~v~~~~~~~~~~~~~~~  213 (347)
                      .......++++||=.|+  |.|..+..+++ .+.+|++++.++...+.+++    .+..    .++..+..+.       
T Consensus        45 i~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~-------  114 (194)
T d1dusa_          45 VENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-------  114 (194)
T ss_dssp             HHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-------
T ss_pred             HHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh-------
Confidence            35667889999999987  45666666665 56799999999987777753    2321    2222221111       


Q ss_pred             HHHhcCCcccEEEeCCC----cc----chHHHHhccccCCEEEEE
Q 019049          214 LKARKLKGVDVLYDPVG----GK----LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g----~~----~~~~~~~~l~~~G~~v~~  250 (347)
                         .....||+|+-...    .+    .+..+.+.|+++|+++++
T Consensus       115 ---~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         115 ---VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---hccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               12457999986322    22    356678999999988764

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.65  E-value=0.013  Score=44.67  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=31.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~  185 (347)
                      +++|+|+|| |..|+.++..|...|+ .|+++++++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999999 9999999999999999 5999887654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.50  E-value=0.044  Score=46.21  Aligned_cols=77  Identities=19%  Similarity=0.200  Sum_probs=49.6

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      ..+-+|||+||+|-+|..++..+...|.+|+++++...+.. ............+ ..-   .+.+....  .++|.|+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~D-~~~---~~~~~~~~--~~~d~Vih   85 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TEDMFCDEFHLVD-LRV---MENCLKVT--EGVDHVFN   85 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CGGGTCSEEEECC-TTS---HHHHHHHH--TTCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hhhcccCcEEEee-chh---HHHHHHHh--hcCCeEee
Confidence            45679999999999999999999999999999986543211 1112222222222 222   33444444  47899998


Q ss_pred             CCCc
Q 019049          228 PVGG  231 (347)
Q Consensus       228 ~~g~  231 (347)
                      +++.
T Consensus        86 ~a~~   89 (363)
T d2c5aa1          86 LAAD   89 (363)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8753

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.49  E-value=0.27  Score=36.01  Aligned_cols=131  Identities=11%  Similarity=0.124  Sum_probs=75.1

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          152 VLLVLGAAGGVGVA-AVQIGKVC-GATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       152 ~VlI~g~~g~~G~~-~~~la~~~-g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +|.|+|+ |.+|.- ....++.. +.++++.+.++++.+.+. .++...+++    ++    ++++   . ..+|+|+-|
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~----~~ll---~-~~iD~V~I~   69 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT----DY----RDVL---Q-YGVDAVMIH   69 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS----ST----TGGG---G-GCCSEEEEC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc----cH----HHhc---c-cccceeccc
Confidence            6889999 988854 55666555 558878888887766664 577654332    11    1111   1 368999999


Q ss_pred             CCcc-chHHHHhccccCCEEEEEeecCCCCCC--cchhHh-hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCce
Q 019049          229 VGGK-LTKESLKLLNWGAQILVIGFASGEIPV--IPANIA-LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI  304 (347)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l  304 (347)
                      +... +...+..+++.+ .-+++..+......  ...... -.++..+..- +.++        ...+.++.+.+..|++
T Consensus        70 tp~~~H~~~~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg-~~r~--------~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVG-FNGF--------DAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             SCGGGHHHHHHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEE-CGTH--------HHHHHHHHHHHHHTCC
T ss_pred             ccccccccccccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEE-eCcC--------CHHHHHHHHHhhcCCC
Confidence            8874 456667777755 55667655432110  111112 1233333221 1111        2456777788888887


Q ss_pred             e
Q 019049          305 T  305 (347)
Q Consensus       305 ~  305 (347)
                      -
T Consensus       140 g  140 (167)
T d1xeaa1         140 P  140 (167)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.40  E-value=0.044  Score=38.27  Aligned_cols=40  Identities=23%  Similarity=0.408  Sum_probs=35.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ..++++++++|.|+ |.+|.-++..++..|.+|+++.+++.
T Consensus        25 ~~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          25 AGLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             HHCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             HhhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            34567899999999 99999999999999999999998754

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.35  E-value=0.15  Score=39.86  Aligned_cols=101  Identities=17%  Similarity=0.206  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ....++||++||=.|+  +.|..+..+++.. +.+|++++.++.-.+.+++.    +-...+........    ...  .
T Consensus        68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~----~~~--~  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ----EYA--N  139 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG----GGT--T
T ss_pred             HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc----ccc--c
Confidence            4567899999999998  4467777778764 35999999999877766542    21122222222210    000  1


Q ss_pred             cCCcccEEEeCCCc-----cchHHHHhccccCCEEEEEe
Q 019049          218 KLKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 ~~~~~d~v~d~~g~-----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ....+|+++.....     ..+.++.+.|+++|.+++.-
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            12345666665543     23567889999999988763

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.32  E-value=0.13  Score=39.88  Aligned_cols=96  Identities=11%  Similarity=0.122  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHH---cCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKV---CGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~---~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      .+.++.+||=+|+  |.|..+..+++.   .+++|++++.+++-++.+++    .+....+.....+..        ...
T Consensus        36 ~~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~--------~~~  105 (225)
T d1im8a_          36 FVTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIR--------HVE  105 (225)
T ss_dssp             HCCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTT--------TCC
T ss_pred             hcCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhh--------ccc
Confidence            3678999999998  456666666664   57899999999987777754    232211111111110        012


Q ss_pred             CCcccEEEeCCCc---------cchHHHHhccccCCEEEEEe
Q 019049          219 LKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       219 ~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ...+|+++-+..-         ..++.+.+.|+|+|.++...
T Consensus       106 ~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         106 IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             CCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            3456766554321         24678899999999999864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.30  E-value=0.039  Score=38.21  Aligned_cols=35  Identities=20%  Similarity=0.336  Sum_probs=32.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .++++|+|+ |.+|+-+++.+..+|.+|+++.+.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            479999999 99999999999999999999998654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.26  E-value=0.021  Score=46.70  Aligned_cols=34  Identities=26%  Similarity=0.353  Sum_probs=31.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +++|+|+|| |..|+.++..++..|.+|++++.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            579999999 9999999999999999999999754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.23  E-value=0.09  Score=43.61  Aligned_cols=102  Identities=17%  Similarity=0.221  Sum_probs=61.7

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcC
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      ..+++|++||=.++  +.|..++.+++. |+ +|+.++.++...+.+++    .|...-+.....+..+......  -.+
T Consensus       141 ~~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~--~~~  215 (324)
T d2as0a2         141 KWVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQ--KKG  215 (324)
T ss_dssp             GGCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH--HTT
T ss_pred             hhcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHH--hcc
Confidence            34678999987776  344455555544 66 89999999998877753    4542112222233311121111  235


Q ss_pred             CcccEEEeCCCc----------------cchHHHHhccccCCEEEEEe
Q 019049          220 KGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       220 ~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ..||+|+--.+.                ..+..++++|+++|.++.+.
T Consensus       216 ~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s  263 (324)
T d2as0a2         216 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS  263 (324)
T ss_dssp             CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            689999853321                03456778999999999874

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.10  E-value=0.095  Score=40.91  Aligned_cols=79  Identities=19%  Similarity=0.194  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      .|.+|+|.|- |.+|..+++++...|++|++++.+..+...+. ..|+..+ +  ..++           -...+|+++=
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~--~~~~-----------~~~~cDIl~P  102 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-A--PNAI-----------YGVTCDIFAP  102 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-C--GGGT-----------TTCCCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-C--Cccc-----------ccccccEecc
Confidence            6889999999 99999999999999999999999988877665 4665432 1  1111           1246788877


Q ss_pred             CCCcc-chHHHHhccc
Q 019049          228 PVGGK-LTKESLKLLN  242 (347)
Q Consensus       228 ~~g~~-~~~~~~~~l~  242 (347)
                      |+-.. ........++
T Consensus       103 cA~~~~I~~~~~~~l~  118 (230)
T d1leha1         103 CALGAVLNDFTIPQLK  118 (230)
T ss_dssp             CSCSCCBSTTHHHHCC
T ss_pred             cccccccChHHhhccC
Confidence            66543 3333344443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.08  E-value=0.029  Score=44.80  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=31.0

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .++|+|+|| |..|++++..+...|.+|+++++++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999999 9999999999999999999999754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.98  E-value=0.063  Score=44.72  Aligned_cols=73  Identities=21%  Similarity=0.174  Sum_probs=45.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHh-cCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKS-LGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~-~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      +|||+||+|-+|..+++.+...| .+|++++....+...... .++..+- |..+...  ..+...     .++|+|+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~--~~~~~~-----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSE--WIEYHV-----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSH--HHHHHH-----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHH--HHHHHH-----hCCCccccc
Confidence            59999999999999998887788 589999876554433322 2222221 2222211  111121     368999998


Q ss_pred             CCc
Q 019049          229 VGG  231 (347)
Q Consensus       229 ~g~  231 (347)
                      ++.
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            874

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.93  E-value=0.11  Score=38.67  Aligned_cols=97  Identities=21%  Similarity=0.228  Sum_probs=60.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEec-C-hhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh---------cC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVAR-G-AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR---------KL  219 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~-~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~---------~~  219 (347)
                      +|.|.|- |.+|....+.+.... .+++++.. + ......+...+.+.... ... .   ........         ..
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~-~~~-~---~~~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAA-SEE-F---IPRFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEES-SGG-G---HHHHHHHTCCCSCBHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecc-ccc-c---eeeecccCccccchhhhhh
Confidence            7899999 999998888776554 47776653 2 23445566666543321 111 1   11111110         01


Q ss_pred             CcccEEEeCCCccc-hHHHHhccccCCEEEEEeecC
Q 019049          220 KGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       220 ~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      .++|+|+||+|.-. .+.+-..++.+-+.|+++.+.
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            37999999999743 456667888888888876544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.79  E-value=0.038  Score=45.63  Aligned_cols=44  Identities=20%  Similarity=0.191  Sum_probs=34.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLG  194 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g  194 (347)
                      ++|||+|++|-+|..++..+...|++|+++++...  ..+.++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc
Confidence            58999999999999999988888999999987543  234444444

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.77  E-value=0.046  Score=37.83  Aligned_cols=35  Identities=23%  Similarity=0.152  Sum_probs=31.7

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .++|+|.|+ |.+|+-+++.++.+|.+|+++.+.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            468999999 99999999999999999999998653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.09  Score=43.75  Aligned_cols=34  Identities=18%  Similarity=0.232  Sum_probs=30.3

Q ss_pred             CEE-EEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          151 QVL-LVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       151 ~~V-lI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ++| ||+||+|-+|..++..+...|++|+++++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            357 9999999999999999988999999999854

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.68  E-value=0.69  Score=34.31  Aligned_cols=90  Identities=20%  Similarity=0.250  Sum_probs=58.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEE-ecChhhHHHH-HhcCCc---EEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAV-ARGAEKIKFL-KSLGVD---HVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~-~~~~~~~~~~-~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      +|.|+|+ |.+|...++.++.. +.+++++ +.+.++.+.+ ++++..   .+++    +    .+++++   ...+|+|
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~----~----~~~ll~---~~~iD~v   70 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG----S----YESLLE---DPEIDAL   70 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES----S----HHHHHH---CTTCCEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC----c----HHHhhh---cccccee
Confidence            6889998 99999888888776 5688765 5566655444 456532   2221    1    344443   3578999


Q ss_pred             EeCCCcc-chHHHHhccccCCEEEEEeecC
Q 019049          226 YDPVGGK-LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       226 ~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +.|+... .+..+..+++.+ .=+++..+.
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g-~~v~~EKP~   99 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKG-KHILLEKPV   99 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTT-CEEEECSSC
T ss_pred             eecccchhhcchhhhhhhcc-ceeeccccc
Confidence            9998874 456677777754 556665443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.54  E-value=0.087  Score=37.34  Aligned_cols=40  Identities=20%  Similarity=0.329  Sum_probs=35.3

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ..+.++++|+|+|+ |.+|+-++..++..|.+|+++.+.+.
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            44567899999999 99999999999999999999998653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.52  E-value=0.068  Score=37.11  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=31.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .++++|+|+ |.+|+=+++.+..+|.+|+++.+++.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            478999999 99999999999999999999997643

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=93.52  E-value=0.081  Score=39.84  Aligned_cols=93  Identities=17%  Similarity=0.136  Sum_probs=55.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|.|.|+||-+|.-.++++..+- .++..+.++...-+...+..... ............     .....+.|++|.|.+
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~Dvvf~alp   80 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHL-ITQDLPNLVAVK-----DADFSNVDAVFCCLP   80 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGG-TTSCCCCCBCGG-----GCCGGGCSEEEECCS
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccc-cccccccchhhh-----hhhhcccceeeeccc
Confidence            78999999999999999998774 47666654433212121111000 000000000000     001247899999999


Q ss_pred             ccchHHHHhccccCCEEEEE
Q 019049          231 GKLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~  250 (347)
                      +.........+...+.++..
T Consensus        81 ~~~s~~~~~~l~~~~~~v~~  100 (183)
T d2cvoa1          81 HGTTQEIIKGLPQELKIVDL  100 (183)
T ss_dssp             SSHHHHHHHTSCSSCEEEEC
T ss_pred             cchHHHHHHHHHhcCccccc
Confidence            98887777778888887764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.50  E-value=0.049  Score=38.11  Aligned_cols=36  Identities=25%  Similarity=0.355  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ..++++|+|+ |.+|+=+++.++.+|.+|+++.+++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4579999999 99999999999999999999998764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.48  E-value=0.16  Score=35.51  Aligned_cols=91  Identities=10%  Similarity=0.123  Sum_probs=63.3

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      ++++|.|. |.+|..+++.++  +.+|++++.++++.+.++..|...+. .+..     ..+.++..+-..++.++-+++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~-----~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVH-GDPT-----RVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEE-SCTT-----SHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccc-cccC-----CHHHHHHhhhhcCcEEEEecc
Confidence            46889998 999998888764  55788899999988888888875443 3322     234555566678899998887


Q ss_pred             ccch----HHHHhccccCCEEEEE
Q 019049          231 GKLT----KESLKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~~~----~~~~~~l~~~G~~v~~  250 (347)
                      ++..    ....+.+.|..+++..
T Consensus        72 ~d~~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          72 SDSETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             SHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred             chhhhHHHHHHHHHHCCCceEEEE
Confidence            6422    3344566677666553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.40  E-value=0.059  Score=42.65  Aligned_cols=36  Identities=28%  Similarity=0.435  Sum_probs=32.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      ++.-++|+|+|| |..|++++..+...|.+|+++++.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            355678999999 999999999999999999999974

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.37  E-value=0.47  Score=35.24  Aligned_cols=136  Identities=17%  Similarity=-0.001  Sum_probs=75.9

Q ss_pred             EEEEecCCchHHHH-HHHHHHHcC--CEEEEE-ecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          152 VLLVLGAAGGVGVA-AVQIGKVCG--ATIIAV-ARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       152 ~VlI~g~~g~~G~~-~~~la~~~g--~~V~~~-~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      +|.|+|. |.+|.- .+..++..+  .+++++ ++++++.+.+ +.++...+++    +    .++++   ....+|+|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~----~----~~ell---~~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD----S----YEELL---ESGLVDAVD   72 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES----C----HHHHH---HSSCCSEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee----e----eeccc---cccccceee
Confidence            6899998 999864 466666543  477754 5566665554 4577655442    2    33333   245789999


Q ss_pred             eCCCcc-chHHHHhccccCCEEEEEeecCCCCCC--cchhHhh-hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcC
Q 019049          227 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPV--IPANIAL-VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG  302 (347)
Q Consensus       227 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  302 (347)
                      .|+... +.+.+..+++. |.-|++..+......  .....+. .++..+.-.+..+   ..+  ....+..+.+++.+|
T Consensus        73 I~tp~~~h~~~~~~al~~-gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R---~~~--~~~~~~~~~~~i~~G  146 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRK-GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFR---ENS--YQKEFEDFYQVVAEG  146 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGG---CCH--HHHHHHHHHHHHHSC
T ss_pred             cccccccccccccccccc-chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeecc---ccc--cCHHHHHHHHHHHCC
Confidence            988874 45566666665 566777655432110  0111122 2233332211111   111  235677888899998


Q ss_pred             cee
Q 019049          303 LIT  305 (347)
Q Consensus       303 ~l~  305 (347)
                      ++-
T Consensus       147 ~ig  149 (181)
T d1zh8a1         147 KPN  149 (181)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            875

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.24  Score=41.00  Aligned_cols=31  Identities=26%  Similarity=0.283  Sum_probs=28.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVA  181 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~  181 (347)
                      ++|||+||+|-+|...+..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            6899999999999999999989999999986

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.31  E-value=0.05  Score=42.76  Aligned_cols=37  Identities=22%  Similarity=0.329  Sum_probs=33.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      ..+++|+|+|+ |..|+.++..++..|.+|++++.+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            46789999999 99999999999999999999987654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.23  E-value=0.18  Score=37.67  Aligned_cols=86  Identities=13%  Similarity=0.053  Sum_probs=50.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCcEEEeC--CC--CCchhhHHHHHHHhcCCcccEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVDL--SN--ESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~~v~~~--~~--~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      +|.|.|+ |.+|.+.+..+...|.+|+...+..+  ..+...+......+..  ..  .......++..     ...|++
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I   75 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV   75 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence            5889999 99999999999888999999887433  2333333221100000  00  00111122221     468999


Q ss_pred             EeCCCccchHHHHhcccc
Q 019049          226 YDPVGGKLTKESLKLLNW  243 (347)
Q Consensus       226 ~d~~g~~~~~~~~~~l~~  243 (347)
                      +.++....+...++.+++
T Consensus        76 i~avps~~~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             EECSCGGGHHHHHHHHTT
T ss_pred             hcccchhhhHHHHHhhcc
Confidence            999998766655543333

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.21  E-value=0.042  Score=41.24  Aligned_cols=43  Identities=16%  Similarity=0.066  Sum_probs=37.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV  195 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~  195 (347)
                      +|-|+|. |.+|...+.-+...|++|++.++++++.+.+.+.++
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence            3778999 999999999888899999999999999888866553

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.11  E-value=0.52  Score=33.81  Aligned_cols=40  Identities=13%  Similarity=0.174  Sum_probs=32.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  192 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~  192 (347)
                      +|.|+|. |-+|...+.-+...|.+|++..+.+.+....+.
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh
Confidence            5889999 999999999999999999988877665544443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.06  E-value=0.03  Score=45.51  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=32.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      -++|||+||+|-+|..++..+...|.+|++++++..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCc
Confidence            368999999999999999999899999999998644

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.05  E-value=0.058  Score=42.43  Aligned_cols=33  Identities=27%  Similarity=0.371  Sum_probs=28.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHH-HHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIG-KVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la-~~~g~~V~~~~~  182 (347)
                      .+.+|+|.|. |-+|..+++.+ +..|++|++++.
T Consensus        30 ~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          30 KKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence            5889999999 99999999887 568999988763

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.02  E-value=0.068  Score=36.80  Aligned_cols=34  Identities=26%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .++++|.|+ |.+|+-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            379999999 9999999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.01  E-value=0.055  Score=37.81  Aligned_cols=33  Identities=21%  Similarity=0.213  Sum_probs=30.1

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .++++|+|+ |.+|+-.++.++.+|.+|+++.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            368999999 999999999999999999999764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.92  E-value=0.073  Score=37.27  Aligned_cols=34  Identities=21%  Similarity=0.230  Sum_probs=31.4

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .++++|.|+ |.+|+-+++.++.+|.+|+++.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            369999999 9999999999999999999999864

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.91  E-value=0.053  Score=39.41  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      .|++|||+|+ |.+|.--+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            6889999999 99999999999999999999965

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.77  E-value=0.059  Score=44.45  Aligned_cols=38  Identities=18%  Similarity=0.317  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .....++|+|+|+ |..|+.++..+...|.+|++++.++
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3445679999999 9999999999999999999999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.67  E-value=0.091  Score=36.80  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=32.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      +..++++|+|+ |.+|+=+++.++.+|.+|+++.+.+.
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            34579999999 99999999999999999999998653

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.65  E-value=0.3  Score=36.35  Aligned_cols=94  Identities=16%  Similarity=0.180  Sum_probs=53.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecCh--hhHHHHHhcCCcEEEeCCC--------CCchhhHHHHHHHhcCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGA--EKIKFLKSLGVDHVVDLSN--------ESVIPSVKEFLKARKLK  220 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~--~~~~~~~~~g~~~v~~~~~--------~~~~~~~~~~~~~~~~~  220 (347)
                      +|.|.|- |.+|...++.+.... .+++++....  .....+...+.........        ...........     .
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            6899998 999999999888664 5888775432  2333333444222111000        00000011111     2


Q ss_pred             cccEEEeCCCccc-hHHHHhccccCCEEEEEe
Q 019049          221 GVDVLYDPVGGKL-TKESLKLLNWGAQILVIG  251 (347)
Q Consensus       221 ~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g  251 (347)
                      ++|+|+||+|... .+.+-.+++.+-+++..+
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~  108 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQG  108 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEEC
Confidence            6899999999743 355666776666766643

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.59  E-value=0.52  Score=35.86  Aligned_cols=94  Identities=15%  Similarity=0.114  Sum_probs=61.8

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  224 (347)
                      +..||=+|+  |.|..++.+|+.. ..++++++.+......+    ++.|...+.-... +.    ..+.+......+|.
T Consensus        30 ~PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~-Da----~~l~~~~~~~~~d~  102 (204)
T d2fcaa1          30 NPIHIEVGT--GKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI-DA----DTLTDVFEPGEVKR  102 (204)
T ss_dssp             CCEEEEECC--TTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC-CG----GGHHHHCCTTSCCE
T ss_pred             CceEEEEEe--cCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc-ch----hhhhcccCchhhhc
Confidence            345677776  5688888888876 67999999998876555    4566554332222 22    22334455667887


Q ss_pred             EEeCCCcc---------------chHHHHhccccCCEEEEE
Q 019049          225 LYDPVGGK---------------LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       225 v~d~~g~~---------------~~~~~~~~l~~~G~~v~~  250 (347)
                      |+-....+               .+..+.+.|+|+|.+.+.
T Consensus       103 v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         103 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            76544332               346677999999998875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.53  E-value=0.049  Score=40.18  Aligned_cols=90  Identities=20%  Similarity=0.174  Sum_probs=55.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcC----C----cEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLG----V----DHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g----~----~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      +|+|+|++|-+|.+.++.+... ++++++....+.....-+..|    .    ..+.+... ..            ...+
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~-~~------------~~~~   72 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLD-AV------------KDDF   72 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCST-TT------------TTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHH-HH------------hccc
Confidence            7899999999999999988765 567665543322111001111    0    01111111 11            2468


Q ss_pred             cEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          223 DVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       223 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      |+++|++..+.....++.....|.=+.+|..+
T Consensus        73 DViIDFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          73 DVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             ceEEEeccHHHHHHHHHHHHhccceeEEecCC
Confidence            99999998877777777777777777777554

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.46  E-value=0.21  Score=41.11  Aligned_cols=97  Identities=22%  Similarity=0.313  Sum_probs=55.0

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhH---HHHHhcCC---cEEEeCCCCCchhhHHH
Q 019049          140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI---KFLKSLGV---DHVVDLSNESVIPSVKE  212 (347)
Q Consensus       140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~---~~~~~~g~---~~v~~~~~~~~~~~~~~  212 (347)
                      ++.....+.+|++||-+|+ | .|.++..+++ .|+ +|++++.++.-.   +.++..+.   ..++..+..++.     
T Consensus        24 ai~~~~~~~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~-----   95 (316)
T d1oria_          24 SMFHNRHLFKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-----   95 (316)
T ss_dssp             HHHTCHHHHTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC-----
T ss_pred             HHHhccccCCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcc-----
Confidence            3433344568999999988 3 3666665555 676 799999876421   12233332   223332222220     


Q ss_pred             HHHHhcCCcccEEEeC-CCc-----cch----HHHHhccccCCEEE
Q 019049          213 FLKARKLKGVDVLYDP-VGG-----KLT----KESLKLLNWGAQIL  248 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~-~g~-----~~~----~~~~~~l~~~G~~v  248 (347)
                          .....+|+|+.. .+.     ..+    ...-++|+|+|+++
T Consensus        96 ----~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          96 ----LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             ----CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ----cccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence                123578998753 332     122    33457999999886

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.43  E-value=0.22  Score=41.06  Aligned_cols=101  Identities=15%  Similarity=0.154  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      ..+|++||=.++ | .|..++++++ -+++|++++.++...+.+++    .|.+.+ .....+..+..+...  ..+..|
T Consensus       143 ~~~g~rVLDl~~-g-tG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~-~~i~~d~~~~~~~~~--~~~~~f  216 (318)
T d1wxxa2         143 RFRGERALDVFS-Y-AGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNV-RVLEANAFDLLRRLE--KEGERF  216 (318)
T ss_dssp             GCCEEEEEEETC-T-TTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTE-EEEESCHHHHHHHHH--HTTCCE
T ss_pred             HhCCCeeeccCC-C-CcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCc-ceeeccHHHHhhhhH--hhhcCC
Confidence            347889987766 2 2444455554 35699999999998887753    454321 111122211122111  235689


Q ss_pred             cEEEeCCC-----c-----------cchHHHHhccccCCEEEEEeec
Q 019049          223 DVLYDPVG-----G-----------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       223 d~v~d~~g-----~-----------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      |+|+--.+     .           ..+..++++|+|+|.++.+...
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            98874221     1           1234677899999999887543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.18  E-value=0.52  Score=35.31  Aligned_cols=84  Identities=14%  Similarity=0.230  Sum_probs=58.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .+++|.|+|. |.+|...+++++.+|.+|++.++.....       ........  +    .+++..     ..|++..+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~-------~~~~~~~~--~----l~ell~-----~sDii~i~  103 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLP-------LGNATQVQ--H----LSDLLN-----MSDVVSLH  103 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCC-------CTTCEECS--C----HHHHHH-----HCSEEEEC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeeccccccch-------hhhhhhhh--h----HHHHHh-----hccceeec
Confidence            5789999999 9999999999999999999999754311       01111111  1    444443     35888887


Q ss_pred             CCc-----cch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-----KLT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-----~~~-~~~~~~l~~~G~~v~~g  251 (347)
                      ++-     ..+ ...++.|+++..++.++
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         104 VPENPSTKNMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             CCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             ccCCcchhhhccHHHHhhCCCCCEEEEcC
Confidence            662     123 67889999988888764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.14  E-value=0.18  Score=39.68  Aligned_cols=88  Identities=14%  Similarity=0.051  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      ++++||=+|+.  .|..+..+++ .|.+|++++.+++-++.+++    .|.. .++..   ++       ........||
T Consensus        37 ~~~~vLDiGCG--~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~---d~-------~~~~~~~~fD  103 (246)
T d1y8ca_          37 VFDDYLDLACG--TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ---DI-------SNLNINRKFD  103 (246)
T ss_dssp             CTTEEEEETCT--TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC---CG-------GGCCCSCCEE
T ss_pred             CCCeEEEEeCc--CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc---ch-------hhhccccccc
Confidence            45789999983  4566666655 58899999999987766643    3422 22211   11       0111235799


Q ss_pred             EEEeCCCc-----------cchHHHHhccccCCEEEE
Q 019049          224 VLYDPVGG-----------KLTKESLKLLNWGAQILV  249 (347)
Q Consensus       224 ~v~d~~g~-----------~~~~~~~~~l~~~G~~v~  249 (347)
                      +|+...+.           ..++.+.++|+|+|.++.
T Consensus       104 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            99864332           135678899999999885

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.11  E-value=0.46  Score=34.99  Aligned_cols=97  Identities=14%  Similarity=0.127  Sum_probs=56.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecC--hhhHHHHHhcCCcEEEeCCCCCch-hh-----HHHHHHHhcCCcc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARG--AEKIKFLKSLGVDHVVDLSNESVI-PS-----VKEFLKARKLKGV  222 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~--~~~~~~~~~~g~~~v~~~~~~~~~-~~-----~~~~~~~~~~~~~  222 (347)
                      +|.|.|- |.+|..+.+++...+ .+++++...  ......+...+.+......+.... +.     .....+..  .++
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~--~~v   79 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML--DEA   79 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH--HTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh--cCC
Confidence            7899998 999999998887665 477665542  233455556665433221110000 00     00011111  368


Q ss_pred             cEEEeCCCcc-chHHHHhccccCCEEEEEe
Q 019049          223 DVLYDPVGGK-LTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       223 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  251 (347)
                      |+|+||+|.- ..+.+-..++.+-+.+..+
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~  109 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQG  109 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECT
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEEC
Confidence            9999999973 3355666777777777654

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.09  E-value=2.5  Score=34.91  Aligned_cols=109  Identities=24%  Similarity=0.320  Sum_probs=70.2

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---ChhhHHHHHhcCCcEEEeCCCC------C--------
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVVDLSNE------S--------  205 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---~~~~~~~~~~~g~~~v~~~~~~------~--------  205 (347)
                      +...+++++.|+. ..+|-.|.+++..|+.+|.+.+++..   +++|.+.++.+|++-+......      .        
T Consensus        90 ~~g~~~~~~~vv~-aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTIIE-PTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceEEE-ecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            4556677666555 44499999999999999998766654   4468888899998755421110      0        


Q ss_pred             ------------------ch----hhHHHHHHHhcCCcccEEEeCCCccc----hHHHHhccccCCEEEEEeec
Q 019049          206 ------------------VI----PSVKEFLKARKLKGVDVLYDPVGGKL----TKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       206 ------------------~~----~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~~G~~v~~g~~  253 (347)
                                        ..    -...++.+.+++ .+|.++.++|+..    +...+....+.-+++.+...
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~-~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep~  241 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDG-KLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPE  241 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTT-CCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCC-CCCeeEecccCCchHHHHHHHHhhcCCcceEEeeccc
Confidence                              00    012344455543 5899999998632    24455666677788877643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.03  E-value=0.11  Score=36.20  Aligned_cols=36  Identities=19%  Similarity=0.325  Sum_probs=32.2

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +.+++++|.|+ |.+|+-+++.+..+|.+|+++.+++
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            34579999999 9999999999999999999998764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.97  E-value=2.4  Score=33.83  Aligned_cols=108  Identities=13%  Similarity=0.211  Sum_probs=69.3

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---ChhhHHHHHhcCCcEEEeCCCCCch------------
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVVDLSNESVI------------  207 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---~~~~~~~~~~~g~~~v~~~~~~~~~------------  207 (347)
                      +...+.++.+|....+ |-.|.+++..++.+|.+++++..   ++.+.+.++.+|+.-++...+....            
T Consensus        53 ~~g~~~~~~~vv~aSs-GN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATS-GNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HTTSCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeeecc-cchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            4455666665555444 99999999999999997666655   5567888889998754432211110            


Q ss_pred             ----------------h----hHHHHHHHhcCCcccEEEeCCCcc----chHHHHhccccCCEEEEEee
Q 019049          208 ----------------P----SVKEFLKARKLKGVDVLYDPVGGK----LTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       208 ----------------~----~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  252 (347)
                                      .    ...++.+..+ +.+|.++-++|+.    .+...++...+..+++.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~-~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTG-GRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTT-TCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcC-CCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                            0    1223333333 4689999988863    23456677778888877764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.71  E-value=0.099  Score=43.11  Aligned_cols=35  Identities=17%  Similarity=0.225  Sum_probs=31.5

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .++|+|+|| |..|+.++..+...|.+|++++.++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            578999999 99999999999888999999998653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.64  E-value=0.11  Score=43.31  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      .-++|||+||+|-+|..++..+...|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            3468999999999999999999999999999975

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=91.63  E-value=0.097  Score=42.91  Aligned_cols=33  Identities=21%  Similarity=0.229  Sum_probs=29.0

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      ++|||+|++|-+|..++..+...|..++++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            589999999999999999999899988876643

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.58  E-value=0.51  Score=37.08  Aligned_cols=92  Identities=16%  Similarity=0.142  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EE--E--eCCCCCchhhHHHHHHHh
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HV--V--DLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v--~--~~~~~~~~~~~~~~~~~~  217 (347)
                      +.++++||=+|+ | .|..+..+++.-..+|++++.+++.++.+++    .+.. .+  +  |.....+          .
T Consensus        22 ~~~~~~VLDlGC-G-~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------~   89 (252)
T d1ri5a_          22 TKRGDSVLDLGC-G-KGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----------D   89 (252)
T ss_dssp             CCTTCEEEEETC-T-TTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------C
T ss_pred             CCCcCEEEEecc-c-CcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc----------c
Confidence            578999999998 3 3555666666544589999999998777753    3322 11  1  1111111          0


Q ss_pred             cCCcccEEEeCCCcc-----------chHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLYDPVGGK-----------LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~d~~g~~-----------~~~~~~~~l~~~G~~v~~  250 (347)
                      ....||+|+..-.-.           .+..+.+.|+++|.++..
T Consensus        90 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          90 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            235699997644321           235567899999998764

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.51  E-value=0.21  Score=38.54  Aligned_cols=96  Identities=13%  Similarity=0.047  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc----CCc--EEEeCCCCCchhhHHHHHHHhcC
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVD--HVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~----g~~--~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      ...++.+||=+|+  |.|..+..+++..+.+|++++.+++-.+.+++.    +..  .++..+-.++         ....
T Consensus        57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~---------~~~~  125 (222)
T d2ex4a1          57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF---------TPEP  125 (222)
T ss_dssp             -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC---------CCCS
T ss_pred             CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccc---------cccc
Confidence            3467789999997  567788888777777999999999888877653    221  1222221111         0124


Q ss_pred             CcccEEEeCCC-----c----cchHHHHhccccCCEEEEEee
Q 019049          220 KGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       220 ~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      ..||+|+....     .    ..+..+.+.|+++|.++....
T Consensus       126 ~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         126 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            57899986432     2    245677899999999998753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.37  E-value=0.1  Score=39.89  Aligned_cols=84  Identities=26%  Similarity=0.345  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  228 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~  228 (347)
                      .|++|.|+|. |.+|..++++++.+|++|++.++...+..   ....    ..  .+    .+++..     ..|++.-+
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~---~~~~----~~--~~----l~~l~~-----~~D~v~~~  104 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDF----DY--VS----LEDLFK-----QSDVIDLH  104 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTC----EE--CC----HHHHHH-----HCSEEEEC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccchhh---hcch----hH--HH----HHHHHH-----hcccceee
Confidence            3689999999 99999999999999999999998644210   0011    11  11    444443     35888776


Q ss_pred             CCc-c----ch-HHHHhccccCCEEEEEe
Q 019049          229 VGG-K----LT-KESLKLLNWGAQILVIG  251 (347)
Q Consensus       229 ~g~-~----~~-~~~~~~l~~~G~~v~~g  251 (347)
                      +.. +    .+ ...+..|+++..++.++
T Consensus       105 ~plt~~T~~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         105 VPGIEQNTHIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             CCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred             ecccccccccccHHHhhccCCceEEEecc
Confidence            653 1    22 66889999999888764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.35  E-value=0.079  Score=42.90  Aligned_cols=33  Identities=21%  Similarity=0.326  Sum_probs=30.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .|+|+|| |+.|++++..++..|.+|.++++.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5999999 99999999999999999999998754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.29  E-value=1.2  Score=33.23  Aligned_cols=105  Identities=22%  Similarity=0.304  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh----cCCcE-EEeCCCCCchhhHHHHHHH
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDH-VVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~~~~  216 (347)
                      ....+++++.+ |.++ -|.|-.+-.+++.. +.+|++++.+++..+.+++    ++... .+..   .+ .........
T Consensus        17 ~~l~~~~~~~~-lD~t-~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~---~f-~~~~~~~~~   90 (192)
T d1m6ya2          17 EFLKPEDEKII-LDCT-VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV---SY-READFLLKT   90 (192)
T ss_dssp             HHHCCCTTCEE-EETT-CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC---CG-GGHHHHHHH
T ss_pred             HhhCCCCCCEE-EEec-CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhH---HH-hhHHHHHHH
Confidence            44567777744 4444 45555555666654 6799999999998888865    23222 2222   22 124555566


Q ss_pred             hcCCcccEEEeCCCc----------------cchHHHHhccccCCEEEEEeec
Q 019049          217 RKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      .+...+|.|+--.|-                ..+..+.+.++++|+++.+...
T Consensus        91 ~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          91 LGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             TTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             cCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            666789877533331                1345667888999988876533

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.25  E-value=0.65  Score=33.20  Aligned_cols=38  Identities=29%  Similarity=0.371  Sum_probs=31.4

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEK  186 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~  186 (347)
                      ..+.+|.|+|+ |.+|..++..+...+.  ++..++.++++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            35679999998 9999998888877664  79999988776

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=91.24  E-value=0.44  Score=38.23  Aligned_cols=95  Identities=11%  Similarity=0.131  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEe-CCCCCchhhHHHHHHHh
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVD-LSNESVIPSVKEFLKAR  217 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~-~~~~~~~~~~~~~~~~~  217 (347)
                      .++.+..+||=+|+  |.|..+..+++..  +++|++++.+++-.+.+++    .+.+..+. .+..++          .
T Consensus        23 ~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~----------~   90 (281)
T d2gh1a1          23 WKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI----------E   90 (281)
T ss_dssp             SCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC----------C
T ss_pred             hccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc----------c
Confidence            35677889998887  3588888888765  5799999999987777653    34332221 111111          1


Q ss_pred             cCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEe
Q 019049          218 KLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       218 ~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ....||+|+....     +  ..++.+.+.|+|+|.++...
T Consensus        91 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          91 LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            1346999986533     2  24678899999999998765

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.22  E-value=0.21  Score=36.13  Aligned_cols=47  Identities=11%  Similarity=0.077  Sum_probs=38.0

Q ss_pred             HHHHHHHHhcCCCCCCEEEEe--cCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          136 TSHVALVHRAQLSSGQVLLVL--GAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       136 ~a~~~l~~~~~~~~~~~VlI~--g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      |....+  ..+..+++.++|+  |+ |-+|+-+++.+..+|++|+++++.+.
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CHHHHh--cCccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            444444  4677789999887  55 78999999999999999999998653

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=91.17  E-value=0.39  Score=37.08  Aligned_cols=96  Identities=17%  Similarity=0.068  Sum_probs=59.7

Q ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc--EEEeCCCCCchhhHHHHHHHhcC
Q 019049          142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNESVIPSVKEFLKARKL  219 (347)
Q Consensus       142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~  219 (347)
                      ....+.-++++||=+|+  |.|..+..++ ..|.+|++++.+++..+.+++...+  .++...-.+.          ...
T Consensus        13 ~~~~~~~~~~~VLDiGc--G~G~~~~~l~-~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~----------~~~   79 (225)
T d2p7ia1          13 RAFTPFFRPGNLLELGS--FKGDFTSRLQ-EHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA----------QLP   79 (225)
T ss_dssp             HHHGGGCCSSCEEEESC--TTSHHHHHHT-TTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC----------CCS
T ss_pred             HHhhhhCCCCcEEEEeC--CCcHHHHHHH-HcCCeEEEEeCcHHHhhhhhccccccccccccccccc----------ccc
Confidence            34445556778999987  3466665554 4588999999999988888753222  2222211111          123


Q ss_pred             CcccEEEeCCC-----c--cchHHHH-hccccCCEEEEE
Q 019049          220 KGVDVLYDPVG-----G--KLTKESL-KLLNWGAQILVI  250 (347)
Q Consensus       220 ~~~d~v~d~~g-----~--~~~~~~~-~~l~~~G~~v~~  250 (347)
                      ..||+|+..--     +  ..+..+. ++|+++|.++..
T Consensus        80 ~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          80 RRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             SCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            57999975322     1  1244555 689999998874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=91.16  E-value=0.063  Score=43.44  Aligned_cols=62  Identities=24%  Similarity=0.319  Sum_probs=38.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|||+||+|-+|...+..+...|. ++++......          ...|..+.   +.+++..+   ..++|+||.+++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------~~~Dl~~~---~~~~~~i~---~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------FCGDFSNP---KGVAETVR---KLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------SCCCTTCH---HHHHHHHH---HHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------ccCcCCCH---HHHHHHHH---HcCCCEEEEecc
Confidence            599999999999999988877764 4555443221          11122221   11333333   236799999887

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.12  E-value=0.69  Score=37.65  Aligned_cols=98  Identities=18%  Similarity=0.276  Sum_probs=56.8

Q ss_pred             HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHH---HHHhcCC---cEEEeCCCCCchhhHHH
Q 019049          140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK---FLKSLGV---DHVVDLSNESVIPSVKE  212 (347)
Q Consensus       140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~---~~~~~g~---~~v~~~~~~~~~~~~~~  212 (347)
                      ++.+...+.+|++||-+|+ | .|.++..+|+ .|+ +|++++.++.-..   ..++.+.   ..++..+..++.     
T Consensus        26 ai~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~-----   97 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC-G-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-----   97 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-----
T ss_pred             HHHhccccCCcCEEEEECC-C-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc-----
Confidence            4545556778999999998 3 5566555555 576 8999998875322   2233332   233333322220     


Q ss_pred             HHHHhcCCcccEEEe-CCCc----c-chHH----HHhccccCCEEEE
Q 019049          213 FLKARKLKGVDVLYD-PVGG----K-LTKE----SLKLLNWGAQILV  249 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d-~~g~----~-~~~~----~~~~l~~~G~~v~  249 (347)
                          .....+|+|+. ..+.    + .+..    .-+.|+|+|+++.
T Consensus        98 ----~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~iip  140 (311)
T d2fyta1          98 ----LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP  140 (311)
T ss_dssp             ----CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred             ----CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEec
Confidence                12357999974 2332    1 2222    2358999998863

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.05  E-value=0.13  Score=42.39  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=31.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ++..+|+|+|| |..|+.++..+...|.+|++++.++
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            34568999999 9999999999999999999998754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.88  E-value=0.042  Score=39.76  Aligned_cols=83  Identities=19%  Similarity=0.135  Sum_probs=46.7

Q ss_pred             CEEEEecCCchHHHHHHHH-HHHc---CCEEEEEecChhhHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          151 QVLLVLGAAGGVGVAAVQI-GKVC---GATIIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~l-a~~~---g~~V~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      ++|.|+||||-+|.-.+++ +.+.   -.+++...++..........+ ...+.+..  +    ...      ..++|++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~--~----~~~------~~~~Div   69 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAF--D----LEA------LKALDII   69 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETT--C----HHH------HHTCSEE
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeeccc--c----hhh------hhcCcEE
Confidence            3799999999999999975 4432   236776665543211111111 11111111  1    111      1478999


Q ss_pred             EeCCCccchHHHHhccccCC
Q 019049          226 YDPVGGKLTKESLKLLNWGA  245 (347)
Q Consensus       226 ~d~~g~~~~~~~~~~l~~~G  245 (347)
                      |-|++++........+...|
T Consensus        70 F~a~~~~~s~~~~~~~~~~g   89 (146)
T d1t4ba1          70 VTCQGGDYTNEIYPKLRESG   89 (146)
T ss_dssp             EECSCHHHHHHHHHHHHHTT
T ss_pred             EEecCchHHHHhhHHHHhcC
Confidence            99999877665554444444

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.80  E-value=0.13  Score=41.12  Aligned_cols=33  Identities=21%  Similarity=0.309  Sum_probs=29.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~  185 (347)
                      .|+|+|| |..|++++.+++..|. +|++++++++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6999999 9999999999999996 8888887653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.79  E-value=0.32  Score=34.81  Aligned_cols=38  Identities=21%  Similarity=0.183  Sum_probs=30.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIK  188 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~  188 (347)
                      .+|.|.||+|.+|..++.++...+.  ++..++.++.+.+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~   40 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV   40 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh
Confidence            3789999889999999998888875  7888888765443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.74  E-value=0.16  Score=37.51  Aligned_cols=35  Identities=20%  Similarity=0.401  Sum_probs=29.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~  184 (347)
                      .|++|+|+|+ |..|+.+++.++..+.  +|+++++.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999999 9999999999988874  788887655

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.73  E-value=0.17  Score=40.70  Aligned_cols=103  Identities=23%  Similarity=0.193  Sum_probs=58.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHH----c-C--CEEEEEecChhhHHHHHhc-C-----CcEEEeCCCCCchhhHHHHH
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKV----C-G--ATIIAVARGAEKIKFLKSL-G-----VDHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~----~-g--~~V~~~~~~~~~~~~~~~~-g-----~~~v~~~~~~~~~~~~~~~~  214 (347)
                      ++.-+||=+|+  |.|..+..+++.    . +  .++++++.++.-++.+++. .     ....++.....+.+......
T Consensus        39 ~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          39 KSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             CSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            34447999888  334444444433    2 2  3678999998877777542 1     11122333333211111112


Q ss_pred             HHhcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEee
Q 019049          215 KARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       215 ~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      .......||+|+..-.     +  ..+..+.++|+|+|.++....
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            2234568999986443     2  356788899999998887643

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.44  E-value=0.14  Score=43.09  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=25.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEE-EEEe
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATI-IAVA  181 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V-~~~~  181 (347)
                      +|||+||+|-+|..++..+...|.++ ++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            69999999999999999888889864 4444

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.23  E-value=1.4  Score=35.30  Aligned_cols=79  Identities=20%  Similarity=0.180  Sum_probs=46.8

Q ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHH----HhcCCcEEEe-CCCCCchhhHHHHHHHh
Q 019049          144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVD-LSNESVIPSVKEFLKAR  217 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~----~~~g~~~v~~-~~~~~~~~~~~~~~~~~  217 (347)
                      ....++|++||=..| ++=|. +.+++... +.+|++.+.+..|...+    +.+|...+.. ..+...       ....
T Consensus        97 ~L~~~~g~~vLD~CA-aPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~-------~~~~  167 (284)
T d1sqga2          97 WLAPQNGEHILDLCA-APGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP-------SQWC  167 (284)
T ss_dssp             HHCCCTTCEEEEESC-TTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCT-------HHHH
T ss_pred             ccCccccceeEeccC-ccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccccc-------chhc
Confidence            456789999886655 33232 23444433 35899999999987666    4577653332 232222       1122


Q ss_pred             cCCcccEEE-e--CCCc
Q 019049          218 KLKGVDVLY-D--PVGG  231 (347)
Q Consensus       218 ~~~~~d~v~-d--~~g~  231 (347)
                      ....||.|+ |  |+|.
T Consensus       168 ~~~~fd~IL~DaPCSg~  184 (284)
T d1sqga2         168 GEQQFDRILLDAPCSAT  184 (284)
T ss_dssp             TTCCEEEEEEECCCCCG
T ss_pred             ccccccEEEEecccccc
Confidence            346799886 4  6664

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=90.17  E-value=0.21  Score=36.29  Aligned_cols=91  Identities=20%  Similarity=0.202  Sum_probs=54.6

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~g~---~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      |-+|.|.||+|-+|.-.++++..+..   ++...+++...-+....... ....+..+..             ....|++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~-------------~~~~d~~   67 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA-------------FEGVDIA   67 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTT-------------TTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhh-------------hhhhhhh
Confidence            45899999999999999999988753   45555543221111111111 1111222222             2468999


Q ss_pred             EeCCCccch-HHHHhccccCCEEEEEeec
Q 019049          226 YDPVGGKLT-KESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       226 ~d~~g~~~~-~~~~~~l~~~G~~v~~g~~  253 (347)
                      +-+.+.... .........+-++++.+..
T Consensus        68 f~~~~~~~s~~~~~~~~~~~~~VIDlSsd   96 (154)
T d2gz1a1          68 LFSAGSSTSAKYAPYAVKAGVVVVDNTSY   96 (154)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred             hhccCccchhhHHhhhccccceehhcChh
Confidence            999987554 4455667777788877544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.16  E-value=0.45  Score=37.31  Aligned_cols=33  Identities=30%  Similarity=0.424  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      .|.+|+|.|. |.+|..+++++...|++|++++.
T Consensus        30 ~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          30 EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            6889999999 99999999999999999988774

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.06  E-value=0.036  Score=40.10  Aligned_cols=86  Identities=15%  Similarity=0.165  Sum_probs=49.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---CCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~---g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +|.|.||+|-+|.-.++++..+   ..++..+.++...-+.....+.+... +....             ...+.|++|-
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~-------------~~~~~d~vf~   70 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSF-------------DFSSVGLAFF   70 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGC-------------CGGGCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhh-------------hhccceEEEe
Confidence            6899999999999999999644   34777666544321111111111000 01111             2247899999


Q ss_pred             CCCccchHHHH-hccccCCEEEEE
Q 019049          228 PVGGKLTKESL-KLLNWGAQILVI  250 (347)
Q Consensus       228 ~~g~~~~~~~~-~~l~~~G~~v~~  250 (347)
                      |.++....... .....+.++++.
T Consensus        71 a~p~~~s~~~~~~~~~~g~~VID~   94 (144)
T d2hjsa1          71 AAAAEVSRAHAERARAAGCSVIDL   94 (144)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEET
T ss_pred             cCCcchhhhhccccccCCceEEee
Confidence            99987665544 444555555553

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.81  E-value=0.69  Score=37.29  Aligned_cols=93  Identities=16%  Similarity=0.136  Sum_probs=59.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcC---------C-cEEEeCCCCCchhhHHHHHHHh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG---------V-DHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g---------~-~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      .-++|||.|+  |-|.++-.+++..+. +|.+++.+++=.+.++++-         . ..++.   .+    ..+.+..+
T Consensus        80 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~---~D----a~~~l~~~  150 (290)
T d1xj5a_          80 NPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GD----GVAFLKNA  150 (290)
T ss_dssp             CCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SC----HHHHHHTS
T ss_pred             CCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE---cc----HHHHHhhc
Confidence            4469999997  335556677777665 8999999988777776532         1 11111   11    23344444


Q ss_pred             cCCcccEEE-eCCCc----------cchHHHHhccccCCEEEEE
Q 019049          218 KLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       218 ~~~~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~  250 (347)
                      ....||+|| |+...          +.++.+.++|+++|.++.-
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  194 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  194 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEe
Confidence            456899876 44432          1346778899999999975

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=89.78  E-value=0.41  Score=37.85  Aligned_cols=101  Identities=15%  Similarity=-0.035  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVDHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      ......++.+||=.|+  |.|..+.+++.....+|++++.+++-++.+++. .....+++...++.+    +  ......
T Consensus        87 ~~l~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~----~--~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET----A--TLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG----C--CCCSSC
T ss_pred             hhCCCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccc----c--ccCCCc
Confidence            3444567778998887  568888888887777999999999988888753 211112211111100    0  012357


Q ss_pred             ccEEEeCCC-----c----cchHHHHhccccCCEEEEEe
Q 019049          222 VDVLYDPVG-----G----KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       222 ~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ||+|+..-.     .    ..+..+.+.|+++|.+++..
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            999976432     1    12567889999999998754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.75  E-value=0.13  Score=40.71  Aligned_cols=32  Identities=22%  Similarity=0.376  Sum_probs=28.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~  184 (347)
                      +|+|+|| |..|+.++..++..|. +|++++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4999999 9999999999999997 699998764

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.72  E-value=0.14  Score=39.31  Aligned_cols=34  Identities=29%  Similarity=0.250  Sum_probs=28.6

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecCh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGA  184 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~  184 (347)
                      ++|||.||+|-+|..++..+...|.  +|++..+++
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            6999999999999999998888886  677666543

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=89.70  E-value=0.87  Score=35.73  Aligned_cols=100  Identities=15%  Similarity=0.174  Sum_probs=61.0

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ....+.+.++||=+|+  +.|..+..+++.. +.++++++.. +..+.+    .+.|...-+.....++.+        .
T Consensus        74 ~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D~~~--------~  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGDFFE--------P  142 (253)
T ss_dssp             HHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECCTTS--------C
T ss_pred             hhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccccchh--------h
Confidence            4556677889998886  5688888899877 5689998864 323333    334421111111111100        0


Q ss_pred             cCCcccEEEeCCC-----c----cchHHHHhccccCCEEEEEeec
Q 019049          218 KLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIGFA  253 (347)
Q Consensus       218 ~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  253 (347)
                      ...++|+|+-..-     .    ..++.+.+.|+|+|++++....
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~  187 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD  187 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEecc
Confidence            1346898874322     1    2357788999999999987543

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.67  E-value=1.4  Score=35.99  Aligned_cols=97  Identities=16%  Similarity=0.176  Sum_probs=64.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKV-CGA-TIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLKG  221 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~-~g~-~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
                      ...+++.|+|+ |..+...++.+.. +.. +|.+.++++++.+..    +..+.....+     .   .+..      .+
T Consensus       123 ~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~-----~---~~a~------~~  187 (320)
T d1omoa_         123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ-----P---AEEA------SR  187 (320)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC-----C---HHHH------TS
T ss_pred             CCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc-----h---hhhh------cc
Confidence            34568999999 9999888776665 344 899999999876544    3344433321     1   1111      46


Q ss_pred             ccEEEeCCCc--cchHHHHhccccCCEEEEEeecCCCCCCcc
Q 019049          222 VDVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPVIP  261 (347)
Q Consensus       222 ~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  261 (347)
                      .|+|+.|+.+  +.+..  ++++++-.+..+|.........+
T Consensus       188 aDiV~taT~s~~P~~~~--~~l~~G~hv~~iGs~~p~~~Eld  227 (320)
T d1omoa_         188 CDVLVTTTPSRKPVVKA--EWVEEGTHINAIGADGPGKQELD  227 (320)
T ss_dssp             SSEEEECCCCSSCCBCG--GGCCTTCEEEECSCCSTTCCCBC
T ss_pred             ccEEEEeccCcccccch--hhcCCCCeEeecCCccccccccC
Confidence            8999998876  44542  47899999998887654433333

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.61  E-value=0.087  Score=39.74  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      ++..|+|+|+ |+.|+.++..+.+.|.+|+++++.+
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4568999999 9999999999999999999998643

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.57  E-value=0.3  Score=35.97  Aligned_cols=96  Identities=18%  Similarity=0.175  Sum_probs=56.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHh----cC-CcEEE---------------eCCCCCchhh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKS----LG-VDHVV---------------DLSNESVIPS  209 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~----~g-~~~v~---------------~~~~~~~~~~  209 (347)
                      +|.|.|- |.+|.++.+++...+.+|+++.....  ...++.+    .| ....+               -+...+.   
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p---   77 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP---   77 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG---
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh---
Confidence            5889999 99999999988888888887765432  2333322    22 00000               0111111   


Q ss_pred             HHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecC
Q 019049          210 VKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       210 ~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                       +++-  ....++|+|+||+|.- ..+.+..+++.+-+-|++..+.
T Consensus        78 -~~i~--W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          78 -KEIP--WAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             -GGCC--TGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             -HHCc--ccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence             0000  0124799999999973 4456677777776666665443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=89.53  E-value=1.4  Score=31.25  Aligned_cols=38  Identities=18%  Similarity=0.264  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKI  187 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~  187 (347)
                      ...+|.|+|+ |.+|..++..+...|  .+++.++.++++.
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            3458999998 999999887777766  4899999887654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.48  E-value=0.16  Score=37.80  Aligned_cols=35  Identities=17%  Similarity=0.152  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      .+++|+|+|+ |.+|+-++..++.+|.++.++...+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            5789999999 9999999999999998766655443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.35  E-value=0.12  Score=41.60  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=29.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      +|+|+|+ |..|+.++..+...|.+|++++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4899999 9999999999999999999999754

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.35  E-value=0.15  Score=40.28  Aligned_cols=33  Identities=18%  Similarity=0.349  Sum_probs=29.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      -|+|+|+ |+.|++++..+...|.+|++++.++.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4899999 99999999999999999999998764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=89.31  E-value=0.17  Score=37.60  Aligned_cols=31  Identities=23%  Similarity=0.277  Sum_probs=28.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      -|+|+|+ |+.|+.++..+.+.|.+|.++++.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            3899999 999999999999999999999853

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.28  E-value=0.16  Score=39.96  Aligned_cols=32  Identities=25%  Similarity=0.488  Sum_probs=28.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      |+|+|+ |..|++++..+...|.+|+++++++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899999 99999999888899999999998653

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=89.25  E-value=0.27  Score=37.35  Aligned_cols=90  Identities=19%  Similarity=0.149  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      .+.++.+||=+|+.  .|..+..+     .++++++.+++-.+.+++.+... +..+..++.         .....||+|
T Consensus        33 ~~~~~~~vLDiGcG--~G~~~~~~-----~~~~giD~s~~~~~~a~~~~~~~-~~~d~~~l~---------~~~~~fD~I   95 (208)
T d1vlma_          33 CLLPEGRGVEIGVG--TGRFAVPL-----KIKIGVEPSERMAEIARKRGVFV-LKGTAENLP---------LKDESFDFA   95 (208)
T ss_dssp             HHCCSSCEEEETCT--TSTTHHHH-----TCCEEEESCHHHHHHHHHTTCEE-EECBTTBCC---------SCTTCEEEE
T ss_pred             hhCCCCeEEEECCC--Cccccccc-----ceEEEEeCChhhccccccccccc-ccccccccc---------ccccccccc
Confidence            34567789999983  34444443     35789999999899888876543 332222220         123579999


Q ss_pred             EeCCC-----c--cchHHHHhccccCCEEEEEee
Q 019049          226 YDPVG-----G--KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       226 ~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      +..-.     +  ..+.++.+.|+++|.++....
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            86433     2  245788899999999987653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.16  E-value=0.17  Score=39.41  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=28.7

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      |+|+|+ |..|+.++..+...|.+|++++.++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            899999 9999999999999999999999865

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=89.03  E-value=0.27  Score=36.16  Aligned_cols=98  Identities=18%  Similarity=0.268  Sum_probs=60.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecC---hhhHHHHHh----cC---Cc-------EEEe------CCCCCchh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---AEKIKFLKS----LG---VD-------HVVD------LSNESVIP  208 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~---~~~~~~~~~----~g---~~-------~v~~------~~~~~~~~  208 (347)
                      +|.|.|- |.+|.++.+.+...+.+++++...   .+...++-+    .|   .+       .+++      +...+.  
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p--   78 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP--   78 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG--
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh--
Confidence            5889999 999999999888888888877642   234444433    22   11       0000      111111  


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                        .++-+  ...++|+|+||+|- ...+.+...++.+-+-|++..+..+
T Consensus        79 --~~i~W--~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~d  123 (169)
T d1dssg1          79 --ENIPW--SKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSAD  123 (169)
T ss_dssp             --GGCCH--HHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS
T ss_pred             --HHCCc--cccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCccc
Confidence              00000  12379999999997 4456777888888777777665543

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.94  E-value=0.57  Score=36.07  Aligned_cols=92  Identities=21%  Similarity=0.248  Sum_probs=55.8

Q ss_pred             EEEEecCCchHHH-HHHHHHHHc-CCEEEEE-ecChhhHHHH-HhcCCc--EEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049          152 VLLVLGAAGGVGV-AAVQIGKVC-GATIIAV-ARGAEKIKFL-KSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDVL  225 (347)
Q Consensus       152 ~VlI~g~~g~~G~-~~~~la~~~-g~~V~~~-~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  225 (347)
                      +|.|+|+ |.+|. ..+...+.. +.+++++ ++++++.+.+ +++|..  .+..+++  +    +   +......+|+|
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--~----~---ell~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--F----D---KIAKDPKIDAV  104 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--G----G---GGGGCTTCCEE
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--h----h---hhcccccceee
Confidence            8899998 98886 344444444 6787754 5566665544 456643  2222322  2    1   11234578999


Q ss_pred             EeCCCcc-chHHHHhccccCCEEEEEeecC
Q 019049          226 YDPVGGK-LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       226 ~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +.|+... +...+..+++. |.-+++..+.
T Consensus       105 ~I~tp~~~H~~~~~~al~~-gk~v~~EKPl  133 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA-GKHVMCEKPM  133 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT-TCEEEECSSC
T ss_pred             eeccchhhhhhHHHHhhhc-chhhhcCCCc
Confidence            9998874 45667777765 4666666543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=88.94  E-value=0.24  Score=33.89  Aligned_cols=34  Identities=21%  Similarity=0.285  Sum_probs=27.9

Q ss_pred             CCEEEEecCCchHHHHHHHHHHHc---CCEEEEEecCh
Q 019049          150 GQVLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGA  184 (347)
Q Consensus       150 ~~~VlI~g~~g~~G~~~~~la~~~---g~~V~~~~~~~  184 (347)
                      .++++|.|+ |.+|.-+++++..+   |.+|+++.+++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            479999999 99999888776554   78999998764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.92  E-value=0.18  Score=38.70  Aligned_cols=31  Identities=16%  Similarity=0.272  Sum_probs=28.4

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      -|+|+|+ |+.|+.++..+...|.+|++++..
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            3889999 999999999999999999999864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.86  E-value=2.1  Score=30.79  Aligned_cols=87  Identities=14%  Similarity=0.081  Sum_probs=53.6

Q ss_pred             EEEEecCCchHHHH-HHHHHHHc-CCEEEEEe-cChhhHHH-HHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          152 VLLVLGAAGGVGVA-AVQIGKVC-GATIIAVA-RGAEKIKF-LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       152 ~VlI~g~~g~~G~~-~~~la~~~-g~~V~~~~-~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +|.|+|. |.+|.- ....++.. +.++++++ ++.++.+. .+.++... +  +   .   .+.+.     ..+|+|+.
T Consensus         3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~--~---~---~~~l~-----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A--D---S---LSSLA-----ASCDAVFV   67 (164)
T ss_dssp             EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C--S---S---HHHHH-----TTCSEEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c--c---c---chhhh-----hhcccccc
Confidence            6889998 888864 55555554 66777555 55555544 45666542 1  1   1   23332     35899999


Q ss_pred             CCCcc-chHHHHhccccCCEEEEEeecC
Q 019049          228 PVGGK-LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      |+... +...+..+++.+ .-|++..|.
T Consensus        68 ~tp~~~h~~~~~~al~~g-k~V~~EKPl   94 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAG-VHVCVDKPL   94 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTT-CEEEEESSS
T ss_pred             cccchhcccccccccccc-ceeeccccc
Confidence            98864 456666666665 556676554

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.53  E-value=0.22  Score=34.14  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=28.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC---CEEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG---ATIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g---~~V~~~~~~~  184 (347)
                      ..++++|.|+ |.+|.-++..++.+|   .+|+++.+.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            4579999999 999999888777765   4699988754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.45  E-value=0.42  Score=36.29  Aligned_cols=41  Identities=22%  Similarity=0.319  Sum_probs=36.1

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL  193 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~  193 (347)
                      +|.|+|. |-+|+.++..+...|.+|++.+.++++.+.+.+-
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc
Confidence            5889999 9999999998889999999999999888877653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.23  E-value=0.34  Score=38.99  Aligned_cols=33  Identities=27%  Similarity=0.421  Sum_probs=30.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      .|++|+|.|- |-+|..+++.+...|++|++++.
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            5789999999 99999999999999999998773

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=88.17  E-value=0.43  Score=38.30  Aligned_cols=73  Identities=19%  Similarity=0.342  Sum_probs=42.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCC-EEEEEe--cChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGA-TIIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  229 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~-~V~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~  229 (347)
                      |||+||+|-+|..++..+...|. +|++++  .+..+.....+.......+..+  .   ............++.++-++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKED--F---LIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHH--H---HHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchH--H---HHHHhhhhcccchhhhhhhc
Confidence            89999999999999988888897 688875  2222333344444333332111  1   22222223344567777655


Q ss_pred             C
Q 019049          230 G  230 (347)
Q Consensus       230 g  230 (347)
                      +
T Consensus        77 a   77 (307)
T d1eq2a_          77 A   77 (307)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.16  E-value=1.1  Score=32.72  Aligned_cols=98  Identities=15%  Similarity=0.196  Sum_probs=57.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEec---ChhhHHHHHh----cC---Cc------E-EEe------CCCCCch
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVAR---GAEKIKFLKS----LG---VD------H-VVD------LSNESVI  207 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~---~~~~~~~~~~----~g---~~------~-v~~------~~~~~~~  207 (347)
                      +|.|.|- |.+|.++.+++... ..+++++..   +.+...++-+    .|   ..      . +++      +...+. 
T Consensus         3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p-   80 (169)
T d1u8fo1           3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP-   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCCh-
Confidence            6899999 99999999777654 468877754   2344444433    22   11      0 010      111111 


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                         .++-  ....++|+|+||+|.- ....+...+..+-+-|++..+..+
T Consensus        81 ---~~i~--W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~d  125 (169)
T d1u8fo1          81 ---SKIK--WGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSAD  125 (169)
T ss_dssp             ---GGCC--TTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSS
T ss_pred             ---hhCC--ccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccccc
Confidence               0000  1234799999999973 445666788888777777655433

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.01  E-value=0.34  Score=35.67  Aligned_cols=97  Identities=24%  Similarity=0.204  Sum_probs=61.2

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc------EEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD------HVVDLSNESVIPSVKEFLKARKLKGV  222 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~------~v~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
                      .|++++|.|-+..+|.=++.++...|+.|+....+.. .++  ..+++      .+-+..... .+.+++..     ...
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-~~~lk~~~-----~~a   98 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI-QKF--TRGESLKLNKHHVEDLGEYS-EDLLKKCS-----LDS   98 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE-EEE--ESCCCSSCCCCEEEEEEECC-HHHHHHHH-----HHC
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccc-ccc--ccccceeeeeeccccccccc-hhHHhhcc-----ccC
Confidence            6899999999888999999999999999986664321 100  01111      111111000 00022221     257


Q ss_pred             cEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049          223 DVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       223 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      |+++-++|.+.+..--++++++..++.+|...
T Consensus        99 DIvIsavG~p~~~i~~d~ik~GavvIDvGi~~  130 (171)
T d1edza1          99 DVVITGVPSENYKFPTEYIKEGAVCINFACTK  130 (171)
T ss_dssp             SEEEECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             CEEEEccCCCccccChhhcccCceEeeccccc
Confidence            99999999876644557889999999887553

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=87.71  E-value=1.7  Score=32.54  Aligned_cols=72  Identities=17%  Similarity=0.195  Sum_probs=44.8

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhc-CCcEEEeCCCCCchhhHHHHHHHhc
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-GVDHVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      +....++ .|++||=.|+ | .|.+++. +...|+ +|++++.+++..+.+++. ....++..+-..            -
T Consensus        41 ~~~~~dl-~Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~------------l  104 (197)
T d1ne2a_          41 IYNDGNI-GGRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE------------I  104 (197)
T ss_dssp             HHHHTSS-BTSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG------------C
T ss_pred             HHHcCCC-CCCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEehhh------------c
Confidence            3455666 5889999888 3 3444444 444666 799999999888888763 222333322111            1


Q ss_pred             CCcccEEEeC
Q 019049          219 LKGVDVLYDP  228 (347)
Q Consensus       219 ~~~~d~v~d~  228 (347)
                      .+.||+|+-.
T Consensus       105 ~~~fD~Vi~N  114 (197)
T d1ne2a_         105 SGKYDTWIMN  114 (197)
T ss_dssp             CCCEEEEEEC
T ss_pred             CCcceEEEeC
Confidence            3579988854

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.61  E-value=2.6  Score=35.14  Aligned_cols=55  Identities=16%  Similarity=0.239  Sum_probs=41.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---ChhhHHHHHhcCCcEEEe
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---~~~~~~~~~~~g~~~v~~  200 (347)
                      .+++++.+ +|-..+|-.|.+++..++.+|.+++++..   ++.|.+.++.+|+.-+..
T Consensus       139 ~~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         139 RRVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TTSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             hccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            34677765 45555588999999999999998777665   446778889999876654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=87.44  E-value=1.6  Score=31.91  Aligned_cols=97  Identities=22%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             cCCCCCCEEEEecC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHhc
Q 019049          145 AQLSSGQVLLVLGA-AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       145 ~~~~~~~~VlI~g~-~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ..+..|.+||=.++ +|.+|   +..+ ..|++|+.++.+++..+.++    ..|.. .+...+...+   .  ......
T Consensus        37 ~~~~~g~~vLDl~~G~G~~~---i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~---~--~~~~~~  107 (171)
T d1ws6a1          37 LRYPRRGRFLDPFAGSGAVG---LEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVF---L--PEAKAQ  107 (171)
T ss_dssp             HHCTTCCEEEEETCSSCHHH---HHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHH---H--HHHHHT
T ss_pred             ccccCCCeEEEeccccchhh---hhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcc---c--cccccc
Confidence            35677888876554 33344   4433 46999999999998777664    35543 3332221111   1  111233


Q ss_pred             CCcccEEEeCC----Cc-cchHHHH--hccccCCEEEEE
Q 019049          219 LKGVDVLYDPV----GG-KLTKESL--KLLNWGAQILVI  250 (347)
Q Consensus       219 ~~~~d~v~d~~----g~-~~~~~~~--~~l~~~G~~v~~  250 (347)
                      ...||+||---    +- ..+..++  .+++++|.++.-
T Consensus       108 ~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         108 GERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             CCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            46799997422    11 2333333  468888877753

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=87.41  E-value=1.5  Score=32.17  Aligned_cols=96  Identities=18%  Similarity=0.193  Sum_probs=55.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHc----CCEEEEEec--ChhhHHHHHhc----C---Cc-------EEEe------CCCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC----GATIIAVAR--GAEKIKFLKSL----G---VD-------HVVD------LSNES  205 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~----g~~V~~~~~--~~~~~~~~~~~----g---~~-------~v~~------~~~~~  205 (347)
                      +|.|.|- |.+|.++.+.+...    ..+|+++..  +.+...++-++    |   ..       .+++      +...+
T Consensus         3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            5899999 99999998776543    236666663  23333344221    2   10       0111      11111


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      .    .++-  ....++|+|+||+|. .....+...|..+-+-|++..+.
T Consensus        82 p----~~i~--W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          82 P----AQLP--WGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             G----GGSC--TTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             H----HHCc--ccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            1    0000  023589999999997 44566778888887777776554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=0.27  Score=37.63  Aligned_cols=30  Identities=17%  Similarity=0.413  Sum_probs=27.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      |+|+|+ |+.|+.++..|..+|.+|.+++..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789999 999999999999999999999864

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.09  E-value=0.3  Score=37.74  Aligned_cols=32  Identities=28%  Similarity=0.288  Sum_probs=28.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      -|+|+|+ |+.|+.++..+...|.+|++++..+
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4789999 9999999999999999999998654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=87.02  E-value=0.78  Score=36.12  Aligned_cols=33  Identities=21%  Similarity=0.294  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      .|++|+|.|. |-+|..+++.+...|++|++++.
T Consensus        35 ~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            6789999999 99999999999999999988764

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.99  E-value=0.31  Score=37.28  Aligned_cols=30  Identities=33%  Similarity=0.450  Sum_probs=27.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      |+|+|+ |+.|+.++..|.+.|.+|.++++.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            788999 999999999999999999999864

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.95  E-value=1.2  Score=36.37  Aligned_cols=95  Identities=20%  Similarity=0.283  Sum_probs=53.5

Q ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH----HhcCC---cEEEeCCCCCchhhHHH
Q 019049          141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL----KSLGV---DHVVDLSNESVIPSVKE  212 (347)
Q Consensus       141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~----~~~g~---~~v~~~~~~~~~~~~~~  212 (347)
                      +.......+|++||-+|+ | .|.++..++ ..|+ +|++++.++. ...+    ++.+.   ..++..+..++.     
T Consensus        30 I~~~~~~~~~~~VLDlGc-G-tG~ls~~aa-~~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l~-----  100 (328)
T d1g6q1_          30 IIQNKDLFKDKIVLDVGC-G-TGILSMFAA-KHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDVH-----  100 (328)
T ss_dssp             HHHHHHHHTTCEEEEETC-T-TSHHHHHHH-HTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSC-----
T ss_pred             HHhccccCCcCEEEEeCC-C-CCHHHHHHH-HhCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhcc-----
Confidence            433445568999999998 3 455555444 4677 8999998763 2223    33442   223332222220     


Q ss_pred             HHHHhcCCcccEEEeC-CCc-----cch----HHHHhccccCCEEE
Q 019049          213 FLKARKLKGVDVLYDP-VGG-----KLT----KESLKLLNWGAQIL  248 (347)
Q Consensus       213 ~~~~~~~~~~d~v~d~-~g~-----~~~----~~~~~~l~~~G~~v  248 (347)
                          .....+|+|+.. .+.     ...    ...-++|+|+|+++
T Consensus       101 ----~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         101 ----LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             ----CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ----CcccceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence                123578988753 221     222    23347899999885

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=86.95  E-value=0.28  Score=38.98  Aligned_cols=32  Identities=19%  Similarity=0.185  Sum_probs=28.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      -|+|+|| |.+|++++..+...|.+|+++++.+
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899999 9999999888888899999999754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.83  E-value=0.26  Score=40.09  Aligned_cols=33  Identities=12%  Similarity=0.272  Sum_probs=29.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .|+|+|| |..|+.++..+...|.+|.+++.++.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            4899999 99999999999888999999998653

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=86.63  E-value=0.32  Score=35.62  Aligned_cols=97  Identities=18%  Similarity=0.204  Sum_probs=56.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecChh--hHHHHHh----cC---Cc-------EEEe------CCCCCchh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAE--KIKFLKS----LG---VD-------HVVD------LSNESVIP  208 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~--~~~~~~~----~g---~~-------~v~~------~~~~~~~~  208 (347)
                      +|.|.|- |.+|.++.+++.... .+|+++....+  ...++-+    .|   ..       .+++      +...+.  
T Consensus         3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p--   79 (166)
T d1gado1           3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP--   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG--
T ss_pred             EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh--
Confidence            5889999 999999998877664 47777765433  2223322    22   11       1111      111111  


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG  255 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  255 (347)
                        .++-+  ...++|+|+||+|- ...+.+..+++.+-+-|++..+..
T Consensus        80 --~~i~W--~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          80 --ANLKW--DEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             --GGGCH--HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             --HHCCc--cccCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence              11100  12379999999997 444667788888877677765543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.60  E-value=0.3  Score=40.18  Aligned_cols=31  Identities=23%  Similarity=0.430  Sum_probs=28.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      |+|+|| |..|+.++..++..|.+|++++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789999 9999999999999999999999754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.59  E-value=0.31  Score=37.55  Aligned_cols=32  Identities=19%  Similarity=0.309  Sum_probs=28.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      -|+|+|+ |+.|+.++..|...|.+|++++..+
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            4789999 9999999999999999999998653

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.48  E-value=0.29  Score=37.56  Aligned_cols=31  Identities=26%  Similarity=0.340  Sum_probs=28.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .++|+|+ |+.|+.++..+..+|.+|++++..
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            4889999 999999999999999999999864

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.46  E-value=0.23  Score=41.02  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=27.3

Q ss_pred             EEEEecCCchHHHHHHHHHH-----HcCCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGK-----VCGATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~-----~~g~~V~~~~~~~~  185 (347)
                      -|+|+|| |..|++++..+.     ..|.+|+++++.+.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            4899999 999999887773     56899999987643

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.21  E-value=0.33  Score=39.45  Aligned_cols=33  Identities=24%  Similarity=0.343  Sum_probs=30.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~  185 (347)
                      .|+|+|| |..|++++..++..|.+|++++.+++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            6899999 99999999999999999999997653

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.13  E-value=0.38  Score=37.09  Aligned_cols=33  Identities=18%  Similarity=0.128  Sum_probs=27.5

Q ss_pred             EEEEecCCchHHHHHHHHHHH--cCCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKV--CGATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~--~g~~V~~~~~~~~  185 (347)
                      +|+|+|+ |+.|+.++..++.  .|++|++++..+.
T Consensus         3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            7999999 9999999987654  4789999987653

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.81  E-value=0.35  Score=36.29  Aligned_cols=32  Identities=13%  Similarity=0.086  Sum_probs=28.8

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      ..|+|+|+ |+.|+.++..+.+.|.++++++..
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            57999999 999999999999999999998753

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.74  E-value=0.37  Score=39.73  Aligned_cols=34  Identities=15%  Similarity=0.249  Sum_probs=27.7

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~  185 (347)
                      ++|+|+|| |..|++++..++..|  .+|+++++++.
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            68999999 999999886665554  59999998753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.48  E-value=0.36  Score=39.12  Aligned_cols=32  Identities=28%  Similarity=0.538  Sum_probs=28.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      -|+|+|+ |..|+.++..|...|++|++++..+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            3899999 9999999999999999999998754

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=85.42  E-value=0.94  Score=36.10  Aligned_cols=93  Identities=18%  Similarity=0.137  Sum_probs=59.5

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhc-----CC-----cEEEeCCCCCchhhHHHHHHH
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-----GV-----DHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~-----g~-----~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      .+.++|||.|+  |-|..+..+++..+. +|.+++.+++=.+.++++     ++     ..++.   .+.    ...++.
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~---~D~----~~~l~~  144 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDG----FMHIAK  144 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCS----HHHHHT
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe---chH----HHHHhh
Confidence            34579999997  446666777777665 899999999877766553     21     11211   122    223333


Q ss_pred             hcCCcccEEE-eCCCc----------cchHHHHhccccCCEEEEE
Q 019049          217 RKLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       217 ~~~~~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~  250 (347)
                      + ...+|+|+ |....          +.++.+.+.|+++|.++.-
T Consensus       145 ~-~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         145 S-ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             C-CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             c-CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            3 46899997 43321          1256788899999999864

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.38  E-value=0.42  Score=36.51  Aligned_cols=30  Identities=30%  Similarity=0.422  Sum_probs=27.6

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      ++|+|+ |+.|+.++..+.+.|.+|.+++..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            788999 999999999999999999999754

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=85.29  E-value=1.1  Score=35.30  Aligned_cols=99  Identities=16%  Similarity=0.135  Sum_probs=60.4

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR  217 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~  217 (347)
                      ....+.+.++||=+|+  +.|..+..++++. +.++++++. ++-.+.+    ++.|....+.....++.+.        
T Consensus        75 ~~~d~~~~~~vlDvG~--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~~--------  143 (256)
T d1qzza2          75 DAYDWSAVRHVLDVGG--GNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP--------  143 (256)
T ss_dssp             HTSCCTTCCEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--------
T ss_pred             hcCCCccCCEEEEECC--CCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeecccc--------
Confidence            3445677789988886  6688999999887 679999996 4433333    3344211111111111000        


Q ss_pred             cCCcccEEEeCCC-----c----cchHHHHhccccCCEEEEEee
Q 019049          218 KLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       218 ~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      .+.++|+++-..-     .    ..++++.+.|+|+|+++.+..
T Consensus       144 ~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         144 LPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            1346898874322     1    235778899999999998764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.20  E-value=0.68  Score=33.34  Aligned_cols=35  Identities=29%  Similarity=0.457  Sum_probs=29.0

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA  184 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~  184 (347)
                      -+++|+|+|+ |-+|.=++..+.++|+ .|+++.+.+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4678999999 9999999999999998 577776643

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.15  E-value=0.31  Score=37.72  Aligned_cols=34  Identities=9%  Similarity=0.016  Sum_probs=28.5

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcC-------CEEEEEecChh
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCG-------ATIIAVARGAE  185 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g-------~~V~~~~~~~~  185 (347)
                      .+|+|+|+ |+.|++++..+...|       ++|++.+..+.
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            38999999 999999998887766       57999987653

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=85.06  E-value=2.2  Score=34.52  Aligned_cols=92  Identities=20%  Similarity=0.248  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhc------CC-----cEEEeCCCCCchhhHHHHHHH
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSL------GV-----DHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~------g~-----~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ..++|||.|+  |.|..+-++++... .+|++++.+++=.+.+++.      ++     ..++.   .+    ..+.++.
T Consensus        77 ~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~---~D----a~~~l~~  147 (312)
T d1uira_          77 EPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DD----ARAYLER  147 (312)
T ss_dssp             CCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SC----HHHHHHH
T ss_pred             CcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE---ch----HHHHhhh
Confidence            4579999997  34666667777664 5999999998877766542      10     11221   12    2334444


Q ss_pred             hcCCcccEEE-eCC---Cc----------cchHHHHhccccCCEEEEE
Q 019049          217 RKLKGVDVLY-DPV---GG----------KLTKESLKLLNWGAQILVI  250 (347)
Q Consensus       217 ~~~~~~d~v~-d~~---g~----------~~~~~~~~~l~~~G~~v~~  250 (347)
                      + ...||+|| |..   +.          +.++.+.+.|+++|.++.-
T Consensus       148 ~-~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         148 T-EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             C-CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             c-CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            4 46799987 442   21          1235677999999988764

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.95  E-value=0.42  Score=36.55  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=27.5

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      |+|+|+ |+.|+.++..|.+.|.+|.+++..
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            788999 999999999999999999999853

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=84.87  E-value=2.3  Score=34.51  Aligned_cols=100  Identities=17%  Similarity=0.130  Sum_probs=58.8

Q ss_pred             hcCCCCCCEEEEecC-CchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh----cCC--c--EEEeCCCCCchhhHHHH
Q 019049          144 RAQLSSGQVLLVLGA-AGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGV--D--HVVDLSNESVIPSVKEF  213 (347)
Q Consensus       144 ~~~~~~~~~VlI~g~-~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~--~--~v~~~~~~~~~~~~~~~  213 (347)
                      ...+.+|++||=..+ +|++++   ..+ ..|+ +|+.++.++...+++++    .|.  .  .++.   .+..+..+..
T Consensus       139 ~~~~~~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~---~d~~~~l~~~  211 (317)
T d2b78a2         139 INGSAAGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV---MDVFDYFKYA  211 (317)
T ss_dssp             HHTTTBTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE---SCHHHHHHHH
T ss_pred             HHHhhCCCceeecCCCCcHHHH---HHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE---ccHHHHHHHH
Confidence            355678999986655 444443   333 3577 79999999987877753    222  1  1222   2221112222


Q ss_pred             HHHhcCCcccEEEeCCCc----------------cchHHHHhccccCCEEEEEee
Q 019049          214 LKARKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGF  252 (347)
Q Consensus       214 ~~~~~~~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g~  252 (347)
                      .  ..+..||+|+---+.                ..+..++++|+|+|.++.+..
T Consensus       212 ~--~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         212 R--RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             H--HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             H--hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2  235689998742221                134567889999999988653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.83  E-value=0.41  Score=38.13  Aligned_cols=31  Identities=29%  Similarity=0.318  Sum_probs=27.9

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      |+|+|+ |.+|++++..+...|.+|+++++.+
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899999 9999999988888999999999753

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.58  E-value=1.1  Score=35.68  Aligned_cols=96  Identities=20%  Similarity=0.215  Sum_probs=56.8

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CC------------cEEEeCCCCCchhhHHHHH
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GV------------DHVVDLSNESVIPSVKEFL  214 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~------------~~v~~~~~~~~~~~~~~~~  214 (347)
                      .+.++|||.|+.  -|..+-.+++....+|.+++.+++=.+.++++ +.            +.-+.....+    ....+
T Consensus        71 ~~p~~vLiiG~G--~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~D----a~~~l  144 (276)
T d1mjfa_          71 PKPKRVLVIGGG--DGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD----GFEFI  144 (276)
T ss_dssp             SCCCEEEEEECT--TSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC----HHHHH
T ss_pred             CCCceEEEecCC--chHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEECh----HHHHH
Confidence            455799999973  34444555665445899999988877777652 21            1001111112    22233


Q ss_pred             HHhcCCcccEEE-eCCCc----------cchHHHHhccccCCEEEEEe
Q 019049          215 KARKLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       215 ~~~~~~~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      +.  ...+|+|+ |...+          +.++.+.+.|+++|.++.-.
T Consensus       145 ~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         145 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            32  36799887 44432          12466789999999988753

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=84.23  E-value=3  Score=33.63  Aligned_cols=100  Identities=15%  Similarity=0.079  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcC-C-cEEEeCCCCCc-hhhHHHHHHHhcCCcccE
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG-V-DHVVDLSNESV-IPSVKEFLKARKLKGVDV  224 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g-~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~d~  224 (347)
                      ..++|||.|+  |-|..+-.+++.... +|.+++.+++=.+.++++- . ...++...... .....+.++.+ ...||+
T Consensus       106 ~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~-~~~yDv  182 (312)
T d2b2ca1         106 DPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-KNEFDV  182 (312)
T ss_dssp             SCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-TTCEEE
T ss_pred             CCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhC-CCCCCE
Confidence            4568999997  345666677776664 8999999998777776632 1 01111110000 00123344443 468999


Q ss_pred             EEeCCCc-----------cchHHHHhccccCCEEEEEe
Q 019049          225 LYDPVGG-----------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       225 v~d~~g~-----------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      ||--...           +.++.+.++|+++|.++.-.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            9742221           13466778999999998753

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.16  E-value=0.91  Score=34.00  Aligned_cols=39  Identities=18%  Similarity=0.175  Sum_probs=32.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  192 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~  192 (347)
                      +|.|.|. |-+|+.++..+ +.|.+|++.+.++++.+.++.
T Consensus         2 kI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence            5889998 99999887666 469999999999998887754

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.12  E-value=0.49  Score=35.12  Aligned_cols=89  Identities=22%  Similarity=0.238  Sum_probs=50.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecCh------hhHHHHH-hc-C--CcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGA------EKIKFLK-SL-G--VDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~------~~~~~~~-~~-g--~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      +|.|.|++|-+|.-.++++..+ ..++..+....      ++..... .+ +  ........+..           ....
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~   71 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVR-----------DFSA   71 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGG-----------GTCT
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhh-----------hhhc
Confidence            6899999999999999999987 55765443211      1122221 11 1  11111111111           0135


Q ss_pred             cccEEEeCCCccchHHHHhc-cccCCEEEEEe
Q 019049          221 GVDVLYDPVGGKLTKESLKL-LNWGAQILVIG  251 (347)
Q Consensus       221 ~~d~v~d~~g~~~~~~~~~~-l~~~G~~v~~g  251 (347)
                      ..|++|-|.++......... ...+-+++..+
T Consensus        72 ~~dvvf~alp~~~s~~~~~~~~~~~~~vIDlS  103 (179)
T d2g17a1          72 DVDVVFLATAHEVSHDLAPQFLQAGCVVFDLS  103 (179)
T ss_dssp             TCCEEEECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred             ccceeeccccchhHHHHhhhhhhcCceeeccc
Confidence            78999999998766555444 44444555543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=84.12  E-value=0.36  Score=39.97  Aligned_cols=30  Identities=20%  Similarity=0.206  Sum_probs=24.9

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCCEEEEE
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAV  180 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~  180 (347)
                      .+|||+||+|-+|..++..+...|.+|.++
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~   32 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVT   32 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            589999999999999998888888754443

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.96  E-value=0.45  Score=36.74  Aligned_cols=30  Identities=20%  Similarity=0.380  Sum_probs=27.6

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  182 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~  182 (347)
                      -|+|+|+ |+.|+.++..|.+.|.+|.+++.
T Consensus         5 DviVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           5 DLIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            3789999 99999999999999999999984

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=83.92  E-value=0.16  Score=41.71  Aligned_cols=25  Identities=32%  Similarity=0.236  Sum_probs=22.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGAT  176 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~  176 (347)
                      +|||+|++|-+|..++..+...|.+
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~   26 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYP   26 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCC
Confidence            6999999999999999988887754

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.87  E-value=3.5  Score=28.81  Aligned_cols=35  Identities=14%  Similarity=0.251  Sum_probs=27.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhH
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKI  187 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~  187 (347)
                      +|.|.|+ |.+|..++..+...+  .++...+.++++.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~   38 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA   38 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence            5789998 999998877666655  3899999887654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=83.76  E-value=0.28  Score=35.24  Aligned_cols=83  Identities=17%  Similarity=0.097  Sum_probs=45.6

Q ss_pred             EEEEecCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049          152 VLLVLGAAGGVGVAAVQIGKV----CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  227 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~----~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d  227 (347)
                      +|.|.||||-+|.-.++++..    ...++..++++...-+. -.++..........+    .. .     ....|++|-
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~~~~~~~~~~~~~~~----~~-~-----~~~~DvvF~   70 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-PNFGKDAGMLHDAFD----IE-S-----LKQLDAVIT   70 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-CCSSSCCCBCEETTC----HH-H-----HTTCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-cccCCcceeeecccc----hh-h-----hccccEEEE
Confidence            589999999999999986543    23566665554321110 011111100000001    11 1     157899999


Q ss_pred             CCCccchHHHHhccccCC
Q 019049          228 PVGGKLTKESLKLLNWGA  245 (347)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G  245 (347)
                      |+++.........+...|
T Consensus        71 alp~~~s~~~~~~l~~~g   88 (147)
T d1mb4a1          71 CQGGSYTEKVYPALRQAG   88 (147)
T ss_dssp             CSCHHHHHHHHHHHHHTT
T ss_pred             ecCchHHHHHhHHHHHcC
Confidence            999877766554444444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=83.47  E-value=3  Score=29.24  Aligned_cols=32  Identities=31%  Similarity=0.269  Sum_probs=26.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEec
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVAR  182 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~  182 (347)
                      .+|.|.|++|.+|..++..+...+.  ++...+.
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di   34 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEec
Confidence            3789999889999999888887765  6777774

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=83.39  E-value=5.9  Score=30.26  Aligned_cols=93  Identities=14%  Similarity=0.160  Sum_probs=55.0

Q ss_pred             EEEEecCCch----HHHHHHHHHHHc--CCEEEEE-ecChhhHHH-HHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049          152 VLLVLGAAGG----VGVAAVQIGKVC--GATIIAV-ARGAEKIKF-LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  223 (347)
Q Consensus       152 ~VlI~g~~g~----~G~~~~~la~~~--g~~V~~~-~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  223 (347)
                      +|.|+|. |.    ++...+...+..  +++++++ +++.++.+. +++++......+.+      .+++.   ....+|
T Consensus        18 rvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~------~~~l~---~~~~iD   87 (237)
T d2nvwa1          18 RVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDS------LESFA---QYKDID   87 (237)
T ss_dssp             EEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESC------HHHHH---HCTTCS
T ss_pred             EEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecc------hhhcc---cccccc
Confidence            7899998 44    444444444443  5688865 455555544 45676543222222      23332   345799


Q ss_pred             EEEeCCCcc-chHHHHhccccC-----CEEEEEeecC
Q 019049          224 VLYDPVGGK-LTKESLKLLNWG-----AQILVIGFAS  254 (347)
Q Consensus       224 ~v~d~~g~~-~~~~~~~~l~~~-----G~~v~~g~~~  254 (347)
                      +|+.|+... +.+.+..++..+     ++-|++..+-
T Consensus        88 ~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          88 MIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             eeeccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            999999874 455566666544     5677787664

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.36  E-value=2.4  Score=33.82  Aligned_cols=94  Identities=16%  Similarity=0.157  Sum_probs=59.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcC----------CcEEEeCCCCCchhhHHHHHHH
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG----------VDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g----------~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ...++|||.|+  |-|..+-.+++..+. +|++++.+++=.+.++++-          ...++.   .+    ..+.++.
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~---~D----a~~~l~~  147 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GD----GFEFMKQ  147 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SC----HHHHHHT
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE---cc----HHHHHhc
Confidence            34579999997  345666677776654 8999999988777776532          111111   11    2334443


Q ss_pred             hcCCcccEEE-eCCCc----------cchHHHHhccccCCEEEEEe
Q 019049          217 RKLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVIG  251 (347)
Q Consensus       217 ~~~~~~d~v~-d~~g~----------~~~~~~~~~l~~~G~~v~~g  251 (347)
                      + ...+|+|+ |...+          +.++.+-+.|+++|.++.-.
T Consensus       148 ~-~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         148 N-QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             C-SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             C-CCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            3 45899887 44321          23566788999999998753

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=83.26  E-value=10  Score=30.77  Aligned_cols=94  Identities=22%  Similarity=0.251  Sum_probs=61.1

Q ss_pred             CCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEecChhhHHHH-Hhc----CCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049          148 SSGQVLLVLGAAGGVGVAAVQIG-KVCGA-TIIAVARGAEKIKFL-KSL----GVDHVVDLSNESVIPSVKEFLKARKLK  220 (347)
Q Consensus       148 ~~~~~VlI~g~~g~~G~~~~~la-~~~g~-~V~~~~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~  220 (347)
                      +..+++.|+|+ |..+...++.+ ..++. +|.+.++++++.+.+ +++    |..... ..  +    .++..     .
T Consensus       126 ~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~-~~--s----~~eav-----~  192 (340)
T d1x7da_         126 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRR-AS--S----VAEAV-----K  192 (340)
T ss_dssp             TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEE-CS--S----HHHHH-----T
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCcee-cC--C----HHHHH-----h
Confidence            45679999999 99888877655 44565 899999998865544 333    332211 11  1    22222     5


Q ss_pred             cccEEEeCCCcc----chHHHHhccccCCEEEEEeecCCC
Q 019049          221 GVDVLYDPVGGK----LTKESLKLLNWGAQILVIGFASGE  256 (347)
Q Consensus       221 ~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~  256 (347)
                      +.|+++-|+.+.    .+.  .++++++-.+..+|.....
T Consensus       193 ~ADIi~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~p~  230 (340)
T d1x7da_         193 GVDIITTVTADKAYATIIT--PDMLEPGMHLNAVGGDCPG  230 (340)
T ss_dssp             TCSEEEECCCCSSEEEEEC--GGGCCTTCEEEECSCCBTT
T ss_pred             cCCceeeccccCCCCcccc--hhhcCCCCEEeecccchhh
Confidence            789999877542    333  3688999888888866543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=83.18  E-value=3.6  Score=28.97  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhH
Q 019049          151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKI  187 (347)
Q Consensus       151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~  187 (347)
                      ++|.|+|+ |.+|..++..+...|.  ++...+.++++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            58999997 9999988887776663  899999887754

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=83.17  E-value=4.9  Score=32.26  Aligned_cols=104  Identities=16%  Similarity=0.145  Sum_probs=58.7

Q ss_pred             cCCCCCCEEEEecC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcE-EEeCCCCCchhhHHHHHHHhc
Q 019049          145 AQLSSGQVLLVLGA-AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-VVDLSNESVIPSVKEFLKARK  218 (347)
Q Consensus       145 ~~~~~~~~VlI~g~-~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~~~~~~  218 (347)
                      ....++.+||=..+ +|++   .++++ ..|++|+.++.++...+.+++    .|... -+.....+..+.++...  ..
T Consensus       128 ~~~~~~~rVLdlf~~tG~~---sl~aa-~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~--~~  201 (309)
T d2igta1         128 ETADRPLKVLNLFGYTGVA---SLVAA-AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE--RR  201 (309)
T ss_dssp             HHSSSCCEEEEETCTTCHH---HHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH--HH
T ss_pred             hhccCCCeEEEecCCCcHH---HHHHH-hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHh--hc
Confidence            44567888886655 3444   44444 358999999999998888864    23211 11222233322222222  23


Q ss_pred             CCcccEEEeCCC-----c--------c----chHHHHhccccCCEEEEEeecC
Q 019049          219 LKGVDVLYDPVG-----G--------K----LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       219 ~~~~d~v~d~~g-----~--------~----~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                      +..||+||---.     .        .    .+..+..+++++|.++++...+
T Consensus       202 ~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~~s  254 (309)
T d2igta1         202 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS  254 (309)
T ss_dssp             TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred             CCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEecCC
Confidence            568999874111     0        1    1234567899999877665444

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.93  E-value=0.49  Score=38.60  Aligned_cols=32  Identities=38%  Similarity=0.579  Sum_probs=28.8

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      -|+|+|+ |..|+.++.-|...|++|++++..+
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            5899999 9999999999999999999998754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.63  E-value=3  Score=28.64  Aligned_cols=58  Identities=22%  Similarity=0.304  Sum_probs=46.2

Q ss_pred             HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEe
Q 019049          143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  200 (347)
Q Consensus       143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~  200 (347)
                      ..++++.-+.+++.-..-..-.+++++++.+|. ++++...+++..+.++++|++.+++
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            567777777776654445567788899999988 6888888888888999999999885

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=82.52  E-value=2  Score=31.24  Aligned_cols=82  Identities=15%  Similarity=0.139  Sum_probs=52.3

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  230 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g  230 (347)
                      +|.|+|. |.+|...+..++.. +.+++++.....+.     .....+..+.+...           ....+|+|+.|++
T Consensus         5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~-----~~~~~~~~~~~~~~-----------~~~~~D~Vvi~tp   67 (170)
T d1f06a1           5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL-----DTKTPVFDVADVDK-----------HADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC-----SSSSCEEEGGGGGG-----------TTTTCSEEEECSC
T ss_pred             eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccc-----ccccccccchhhhh-----------hccccceEEEeCC
Confidence            6899998 99999888777765 56777655433211     11112222221110           1246899999998


Q ss_pred             cc-chHHHHhccccCCEEEEE
Q 019049          231 GK-LTKESLKLLNWGAQILVI  250 (347)
Q Consensus       231 ~~-~~~~~~~~l~~~G~~v~~  250 (347)
                      .. +.+.+..+++.|-.++.+
T Consensus        68 ~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          68 SATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             TTTHHHHHHHHHTTTSEEECC
T ss_pred             CcccHHHHHHHHHCCCcEEEe
Confidence            74 567788899998887754

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.45  E-value=6.4  Score=28.31  Aligned_cols=96  Identities=15%  Similarity=0.193  Sum_probs=56.7

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEec---ChhhHHHHHh----cC---Cc-------EEEe------CCCCCch
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVAR---GAEKIKFLKS----LG---VD-------HVVD------LSNESVI  207 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~---~~~~~~~~~~----~g---~~-------~v~~------~~~~~~~  207 (347)
                      +|.|.|- |.+|.++.+.+... ..+|+++..   +.+...++-+    .|   ..       ..++      +...+. 
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p-   79 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP-   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG-
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCCh-
Confidence            6889999 99999999887654 457777753   2344455533    22   11       0010      111111 


Q ss_pred             hhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecC
Q 019049          208 PSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       208 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                         .++-+  ...++|+|+||+|.- ..+.+...+..+-+-|++..+.
T Consensus        80 ---~~i~W--~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          80 ---SQIPW--GKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             ---GGCCH--HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             ---HHccc--cccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence               01000  113799999999973 4456778888887677775554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=82.42  E-value=1.2  Score=32.01  Aligned_cols=40  Identities=8%  Similarity=0.076  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhH
Q 019049          147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI  187 (347)
Q Consensus       147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~  187 (347)
                      +++..+|.|.|+ |.+|..++.++...+. +++..+.++++.
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            356679999998 9999888887777775 899988777643

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=81.93  E-value=0.93  Score=35.01  Aligned_cols=33  Identities=18%  Similarity=0.237  Sum_probs=29.8

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  186 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~  186 (347)
                      |+|+|+ |..|+-++..+.+.|+++.+++.+.+.
T Consensus         5 VIVIGg-G~AG~eAA~~aAR~G~ktllit~~~~~   37 (230)
T d2cula1           5 VLIVGA-GFSGAETAFWLAQKGVRVGLLTQSLDA   37 (230)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEEeccch
Confidence            789999 999999999999999999999887543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.74  E-value=1.7  Score=31.90  Aligned_cols=86  Identities=21%  Similarity=0.212  Sum_probs=49.2

Q ss_pred             EEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  226 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~  226 (347)
                      +|.|.|++|-+|.-.++++..+- .++..+.++...-+.+.+    +-....+  ...+    .+.+.     .+.|++|
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~--~~~~----~~~~~-----~~~dvvf   71 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSIL--SEFD----PEKVS-----KNCDVLF   71 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBC--BCCC----HHHHH-----HHCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccc--cccC----HhHhc-----cccceEE
Confidence            68999999999999999998764 476666554332222221    1111111  1111    12221     2589999


Q ss_pred             eCCCccchHHHHhccccCCEEEE
Q 019049          227 DPVGGKLTKESLKLLNWGAQILV  249 (347)
Q Consensus       227 d~~g~~~~~~~~~~l~~~G~~v~  249 (347)
                      -+.++.......... .+-++++
T Consensus        72 ~a~p~~~s~~~~~~~-~~~~VID   93 (176)
T d1vkna1          72 TALPAGASYDLVREL-KGVKIID   93 (176)
T ss_dssp             ECCSTTHHHHHHTTC-CSCEEEE
T ss_pred             EccccHHHHHHHHhh-ccceEEe
Confidence            999987665554433 3445544

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=81.73  E-value=0.56  Score=38.43  Aligned_cols=31  Identities=26%  Similarity=0.308  Sum_probs=28.3

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      |+|+|+ |..|+.++--|...|++|++++..+
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            899999 9999999999999999999998754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=81.73  E-value=1.5  Score=29.81  Aligned_cols=77  Identities=17%  Similarity=0.286  Sum_probs=44.5

Q ss_pred             CCCEEEEecCCch--HH------HHH---HHHHHHcCCEEEEEecChhhHHHHHhcC-CcEEEeCCCCCchhhHHHHHHH
Q 019049          149 SGQVLLVLGAAGG--VG------VAA---VQIGKVCGATIIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKA  216 (347)
Q Consensus       149 ~~~~VlI~g~~g~--~G------~~~---~~la~~~g~~V~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~  216 (347)
                      ..++|||.|+ |+  +|      .++   +..++..|++++.+..+++-..  .... ++.++ .....    .+.+.+.
T Consensus         3 ~~kkvlViGs-Gp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs--td~d~aD~lY-feplt----~e~v~~I   74 (121)
T d1a9xa4           3 DREKIMVLGG-GPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS--TDYDTSDRLY-FEPVT----LEDVLEI   74 (121)
T ss_dssp             SSCEEEEECC-CSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST--TSTTSSSEEE-CCCCS----HHHHHHH
T ss_pred             CCCEEEEECC-CcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh--cChhhcCceE-EccCC----HHHHHHH
Confidence            4578999998 64  22      444   4445567999999999987433  1112 33332 22222    2333333


Q ss_pred             hcCCcccEEEeCCCccc
Q 019049          217 RKLKGVDVLYDPVGGKL  233 (347)
Q Consensus       217 ~~~~~~d~v~d~~g~~~  233 (347)
                      ....+.|.++-..|+..
T Consensus        75 i~~E~p~~ii~~~GGQt   91 (121)
T d1a9xa4          75 VRIEKPKGVIVQYGGQT   91 (121)
T ss_dssp             HHHHCCSEEECSSSTHH
T ss_pred             HHHhCCCEEEeehhhhh
Confidence            33346688888888754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=81.64  E-value=0.88  Score=35.54  Aligned_cols=33  Identities=27%  Similarity=0.436  Sum_probs=28.8

Q ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEec
Q 019049          149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVAR  182 (347)
Q Consensus       149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~  182 (347)
                      .+.+|+|.|+ |++|..++..+.+.|. ++++++.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            3469999999 9999999999999998 7877764

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=81.63  E-value=0.56  Score=38.25  Aligned_cols=31  Identities=29%  Similarity=0.649  Sum_probs=28.2

Q ss_pred             EEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049          153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  184 (347)
Q Consensus       153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~  184 (347)
                      |+|+|+ |..|+.++..|...|++|++++..+
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899999 9999999988888999999999754

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.32  E-value=4.5  Score=28.39  Aligned_cols=34  Identities=32%  Similarity=0.392  Sum_probs=25.0

Q ss_pred             EEEEecCCchHHHHHHHHHH-Hc--CCEEEEEecChh
Q 019049          152 VLLVLGAAGGVGVAAVQIGK-VC--GATIIAVARGAE  185 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~-~~--g~~V~~~~~~~~  185 (347)
                      +|.|+|++|.+|..++.++. ..  ..++...+..+.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~   38 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV   38 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc
Confidence            68899988999988776553 33  347888887553

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=81.29  E-value=0.89  Score=33.24  Aligned_cols=96  Identities=18%  Similarity=0.203  Sum_probs=54.9

Q ss_pred             EEEEecCCchHHHHHHHHHHHc---CCEEEEEecC--hhhHHHHHh----cC---Cc------E-EEe------CCCCCc
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC---GATIIAVARG--AEKIKFLKS----LG---VD------H-VVD------LSNESV  206 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~---g~~V~~~~~~--~~~~~~~~~----~g---~~------~-v~~------~~~~~~  206 (347)
                      +|.|.|- |.+|.++.+.+...   ..+|+++...  .+...++-+    .|   ..      . +++      +...+.
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            6899999 99999999877543   3577776543  333344422    22   10      0 000      111111


Q ss_pred             hhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC
Q 019049          207 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       207 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                          +++-+  ...++|+|+||+|- .....+...++.+-+-|++..+.
T Consensus        81 ----~~i~W--~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          81 ----SKLPW--KDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             ----GGSCH--HHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ----hhCCc--cccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence                11100  11379999999997 44566777888876666665544

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.22  E-value=4.6  Score=30.43  Aligned_cols=107  Identities=23%  Similarity=0.261  Sum_probs=59.4

Q ss_pred             HHHHHHHHhcCCCCCCEEEEecCCc---hHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHhcCCcEEEeCCCCC
Q 019049          136 TSHVALVHRAQLSSGQVLLVLGAAG---GVGVAAVQIGKVCGATIIAVARGAEK-------IKFLKSLGVDHVVDLSNES  205 (347)
Q Consensus       136 ~a~~~l~~~~~~~~~~~VlI~g~~g---~~G~~~~~la~~~g~~V~~~~~~~~~-------~~~~~~~g~~~v~~~~~~~  205 (347)
                      .++..+.+...-...++|+|..+.|   +=|+++++.++..|++|.++...+.+       .+..++++...+ +.....
T Consensus        26 ~~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  104 (211)
T d2ax3a2          26 SVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQFEPS  104 (211)
T ss_dssp             HHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCCCGG
T ss_pred             HHHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCccc-cccccc
Confidence            3444444443323456788876645   56688888888889988876653321       222234554332 211111


Q ss_pred             chhhHHHHHHHhcCCcccEEEeCC-Cc-------cchHHHHhccccCC-EEEEEeecCC
Q 019049          206 VIPSVKEFLKARKLKGVDVLYDPV-GG-------KLTKESLKLLNWGA-QILVIGFASG  255 (347)
Q Consensus       206 ~~~~~~~~~~~~~~~~~d~v~d~~-g~-------~~~~~~~~~l~~~G-~~v~~g~~~~  255 (347)
                                  ....+|+++|+. |.       ..+..+++++...+ .++.+..+++
T Consensus       105 ------------~~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         105 ------------ILNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             ------------GGGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             ------------cccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence                        124679999986 42       23455666666665 4666665654

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.73  E-value=6.5  Score=26.82  Aligned_cols=39  Identities=13%  Similarity=0.164  Sum_probs=33.9

Q ss_pred             cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049          145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  183 (347)
Q Consensus       145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~  183 (347)
                      .-+.++.+|+|.|-+|.-|....+.++..|-+|++-+..
T Consensus        10 Ili~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtP   48 (130)
T d1euca1          10 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTP   48 (130)
T ss_dssp             GCCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred             EEEcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeecc
Confidence            446788899999999999999999999999998876643

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=80.59  E-value=1.1  Score=32.79  Aligned_cols=96  Identities=17%  Similarity=0.261  Sum_probs=54.0

Q ss_pred             EEEEecCCchHHHHHHHHHHHc-CCEEEEEecCh--hhHHHHHh----cC---Cc-------------EEEeCCCCCchh
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGA--EKIKFLKS----LG---VD-------------HVVDLSNESVIP  208 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~--~~~~~~~~----~g---~~-------------~v~~~~~~~~~~  208 (347)
                      +|.|.|- |.+|.++...+... ..+++++....  +...++-+    .|   ..             .+.-+...+.  
T Consensus         3 kIgINGf-GRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p--   79 (171)
T d3cmco1           3 KVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP--   79 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG--
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCH--
Confidence            6889999 99999998777544 45777775432  22333322    12   00             0000111111  


Q ss_pred             hHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC
Q 019049          209 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  254 (347)
Q Consensus       209 ~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (347)
                        .++-  ....++|+|+||+|. ...+.+...+..+-+-|++..+.
T Consensus        80 --~~i~--W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          80 --ENLA--WGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             --GGCC--TGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             --HHcc--ccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence              0000  012379999999997 44566777788776666665443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.06  E-value=0.78  Score=36.85  Aligned_cols=31  Identities=26%  Similarity=0.374  Sum_probs=26.5

Q ss_pred             EEEEecCCchHHHHHHHHHHHcCC-EEEEEecC
Q 019049          152 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG  183 (347)
Q Consensus       152 ~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~  183 (347)
                      .|+|+|+ |.+|++++..+...|. +|++++++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            4999999 9999998877777886 69999875