Citrus Sinensis ID: 019086
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 346 | 2.2.26 [Sep-21-2011] | |||||||
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.338 | 0.460 | 0.352 | 7e-10 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.338 | 0.460 | 0.344 | 1e-09 | |
| P95649 | 230 | Protein CbbY OS=Rhodobact | yes | no | 0.323 | 0.486 | 0.303 | 4e-06 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | yes | no | 0.323 | 0.493 | 0.336 | 9e-05 |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function desciption |
|---|
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L D + QAFN AF ++GLD W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ESAHLQAFNAAFAEVGLDW-YWDAPLYTRLL-KVAGGKERLM--HY 57
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
R+ P + K + V K E + + PLRPG+ +D+A G+PL +
Sbjct: 58 WRMVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAI 117
Query: 206 LT 207
T
Sbjct: 118 AT 119
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L D + QAFN AF ++GLD +W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ETAHLQAFNAAFAEVGLDW-HWDAPLYTRLL-KVAGGKERLM--HY 57
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
R+ P + K + V K E + + PLRPG+ + +A G+PL +
Sbjct: 58 WRMVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAI 117
Query: 206 LT 207
T
Sbjct: 118 AT 119
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L +VDG L + +R+AFN F LG+D W Y +LL + G E R+
Sbjct: 4 AILFDVDGTLAETEEL-HRRAFNETFAALGVDW-FWDREEYRELLTTTGGKE-RIARFLR 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
++ G P +P + ++ + K +A + LRPG+ D + +A GI L V
Sbjct: 61 HQKGDPAPLP-------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAV 113
Query: 206 LT 207
T
Sbjct: 114 AT 115
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Rhodobacter sphaeroides (taxid: 1063) |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ +VDG L + +RQAFN F GLD W+ Y LLR + G E RM
Sbjct: 5 ALIFDVDGTLAETEEV-HRQAFNETFAAQGLDW-YWSKEDYRTLLRTTGGKE-RMAKHRE 61
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
N +G S P++ K + ++ + K E +AS L PGV + +D A G+ L +
Sbjct: 62 N-LG---SGPSDAK---IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAI 114
Query: 206 LT 207
T
Sbjct: 115 AT 116
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Rhodobacter capsulatus (taxid: 1061) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 346 | ||||||
| 255549546 | 340 | 2-deoxyglucose-6-phosphate phosphatase, | 0.973 | 0.991 | 0.689 | 1e-130 | |
| 224134306 | 380 | predicted protein [Populus trichocarpa] | 0.976 | 0.889 | 0.665 | 1e-119 | |
| 225465107 | 376 | PREDICTED: uncharacterized protein LOC10 | 0.953 | 0.877 | 0.611 | 1e-113 | |
| 296081418 | 367 | unnamed protein product [Vitis vinifera] | 0.953 | 0.899 | 0.611 | 1e-113 | |
| 297791273 | 372 | hypothetical protein ARALYDRAFT_494462 [ | 0.962 | 0.895 | 0.576 | 1e-110 | |
| 30694711 | 372 | CbbY protein-like protein [Arabidopsis t | 0.965 | 0.897 | 0.569 | 1e-109 | |
| 356555851 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.806 | 0.745 | 0.677 | 1e-109 | |
| 356532993 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.806 | 0.752 | 0.673 | 1e-108 | |
| 449433515 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.855 | 0.791 | 0.640 | 1e-107 | |
| 414869086 | 418 | TPA: hypothetical protein ZEAMMB73_04861 | 0.803 | 0.665 | 0.664 | 1e-105 |
| >gi|255549546|ref|XP_002515825.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223545054|gb|EEF46567.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/341 (68%), Positives = 278/341 (81%), Gaps = 4/341 (1%)
Query: 6 TSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVN 65
+SCS+L SLR S ++ + + Q T RN N PSFS +FPRNY GK L N
Sbjct: 4 SSCSILYSLRLSNNF-INYNNKFCSQ-TLPRNCNSFCLGPSFSFSFPRNYKIPGKFLQPN 61
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
++F+SSS QNP +LAVLLEVDGVL+D YR GNRQAFN+AFQKLGLDCANWT PI
Sbjct: 62 GLASFTSSS--PDQNPSLELAVLLEVDGVLMDVYRLGNRQAFNIAFQKLGLDCANWTEPI 119
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y DL+RKSAGDE+RMLVLFFNRIGWPTS+PT+EK FV N+LQEKKNA+DEF+ SK APL
Sbjct: 120 YLDLVRKSAGDEERMLVLFFNRIGWPTSLPTSEKGTFVNNILQEKKNAMDEFVMSKSAPL 179
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
RPG EDF+DDA NEGIP+++LT+Y KS ++IARS+V+KLG ERI KIKIVG+ EV++SLY
Sbjct: 180 RPGAEDFIDDASNEGIPVVILTSYNKSEEKIARSIVDKLGPERILKIKIVGDAEVKQSLY 239
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG+ SG+DEQLA EARKA SA++Q+IAEEVASMLKLSV IDTSS ESL+KIVAA
Sbjct: 240 GQLVLGKGVLSGLDEQLAKEARKAASAERQKIAEEVASMLKLSVQIDTSSSESLEKIVAA 299
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346
LRAGAEYA V NC LIAGSQSGV+ A++IGMPC+V+RSR
Sbjct: 300 LRAGAEYAGLRVSNCVLIAGSQSGVSAAEKIGMPCIVLRSR 340
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134306|ref|XP_002321787.1| predicted protein [Populus trichocarpa] gi|222868783|gb|EEF05914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/353 (66%), Positives = 280/353 (79%), Gaps = 15/353 (4%)
Query: 1 MKTSSTSCSLLNSLRFSTAITVSKKSYY--HYQATQLRNHNCLSPFPS------FSSTFP 52
M+ +++SCS+L+ LR S +Y+ HY T RN + S + FSSTF
Sbjct: 1 MEAAASSCSILHPLR-------SSSNYHSKHYTETPPRNSSSSSCCNNLYLGLPFSSTFL 53
Query: 53 RNYNFHGKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ 112
RNY F GK + N F+ F + QNP + AVLLEVDGVL+DAYR GNR+AFNVAFQ
Sbjct: 54 RNYTFPGKFVQQNLFTTFCLTPSSSKQNPSTEFAVLLEVDGVLIDAYRLGNRRAFNVAFQ 113
Query: 113 KLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKN 172
KLGLDCANWT PIY DL+RKS GDE+RMLVLFFNRIGWPTS+PT+EK AF+K+VL+EKKN
Sbjct: 114 KLGLDCANWTQPIYQDLVRKSDGDEERMLVLFFNRIGWPTSLPTSEKGAFIKSVLREKKN 173
Query: 173 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232
ALDEF+ASK + LRPGVEDF+DDA N+GIP+++LTAYGKS ++IARS+++KLG ERISK+
Sbjct: 174 ALDEFVASKSSLLRPGVEDFIDDASNKGIPVVILTAYGKSVEKIARSIIDKLGHERISKL 233
Query: 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 292
KIVGNEEVE+SLYGQ V KGI SG +E+LA EA KAVSAQKQ+IAEEVASMLKLSV +D
Sbjct: 234 KIVGNEEVEKSLYGQLVHHKGILSGTNEELAKEAMKAVSAQKQKIAEEVASMLKLSVSLD 293
Query: 293 TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
+SS ESL K VAALRAGAEYA V NC LIAGSQSGVAGA++IGMPCVV+RS
Sbjct: 294 SSSSESLQKTVAALRAGAEYAGVSVNNCVLIAGSQSGVAGAEQIGMPCVVLRS 346
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465107|ref|XP_002271573.1| PREDICTED: uncharacterized protein LOC100253116 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/345 (61%), Positives = 258/345 (74%), Gaps = 15/345 (4%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 12 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 59
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 60 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 119
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y DLLRKSAGDE+RML+LFFN+IGWPTSVPT+E+K F++NVL+EKKNALD+ L SK
Sbjct: 120 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 179
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 180 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 239
Query: 244 LYGQFVL--GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301
YGQ +L GKG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 240 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 299
Query: 302 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 300 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 344
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081418|emb|CBI16769.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/345 (61%), Positives = 258/345 (74%), Gaps = 15/345 (4%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 3 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 50
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 51 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 110
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y DLLRKSAGDE+RML+LFFN+IGWPTSVPT+E+K F++NVL+EKKNALD+ L SK
Sbjct: 111 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 170
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 171 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 230
Query: 244 LYGQFVL--GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301
YGQ +L GKG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 231 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 290
Query: 302 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 291 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 335
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297791273|ref|XP_002863521.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] gi|297309356|gb|EFH39780.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/340 (57%), Positives = 259/340 (76%), Gaps = 7/340 (2%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNC-LSPFPSFSSTFPRNYNFHGKCLHVN 65
SCS+L++L+ S +K S + ++ +H+ F SFS+ FP GKCL +
Sbjct: 5 SCSILDNLQLSC----TKTSLFTQYLSEPSSHDTGRRNFLSFSN-FPGKSQILGKCLRLQ 59
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
FS+ S+ + NP +LAV+LEVDGV++D + NRQAFNVAFQKLGLDCANW P+
Sbjct: 60 RFSSICLSASREDVNPSEELAVILEVDGVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPV 118
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL SK PL
Sbjct: 119 YSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLMSKSLPL 178
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
R GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G EVE+S+Y
Sbjct: 179 RSGVQEFIDNAYTERVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGENEVEQSMY 238
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV A
Sbjct: 239 GQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVA 298
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
LRA AE+ PV+NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 299 LRAAAEHIGLPVKNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694711|ref|NP_199330.2| CbbY protein-like protein [Arabidopsis thaliana] gi|44917581|gb|AAS49115.1| At5g45170 [Arabidopsis thaliana] gi|62321581|dbj|BAD95125.1| putative protein [Arabidopsis thaliana] gi|332007829|gb|AED95212.1| CbbY protein-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 251/339 (74%), Gaps = 5/339 (1%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNP 66
SCS+LN+L+ S T Y +++ PF S FP GKCL +
Sbjct: 5 SCSILNNLQISCTKTSIFTQYLSERSSHDTGRRNFLPF----SNFPGKSQILGKCLRLQR 60
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
FS+ S+ + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDCANW P+Y
Sbjct: 61 FSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPVY 119
Query: 127 TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLR 186
+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL SK PLR
Sbjct: 120 SDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLISKSLPLR 179
Query: 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246
GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+ EVE+S+YG
Sbjct: 180 SGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDNEVEQSMYG 239
Query: 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306
Q VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV AL
Sbjct: 240 QLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVAL 299
Query: 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
RA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 300 RAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555851|ref|XP_003546243.1| PREDICTED: uncharacterized protein LOC100800683 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/279 (67%), Positives = 236/279 (84%)
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
SA SSS H + + D+AVLLEVDGVL+D++R GNR AFN AF+KLGLDCANWT P+Y
Sbjct: 56 ISASSSSEYHHNSSSSPDIAVLLEVDGVLMDSHRVGNRLAFNKAFEKLGLDCANWTEPVY 115
Query: 127 TDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLR 186
+DL ++SAGDE++M+ L+FNRIGWP+S+PTNE+ F K VLQ+K+ AL+EF+ SK PLR
Sbjct: 116 SDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSLPLR 175
Query: 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246
PG+E F+DDAYNEG+P+++LTAYGKSGD I S++EKLG +R K+ IVGN+EVE+SLYG
Sbjct: 176 PGLEQFIDDAYNEGVPVVILTAYGKSGDNITGSIMEKLGDDRSIKVIIVGNKEVEQSLYG 235
Query: 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306
Q VLGK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDTSS ESL KIVAAL
Sbjct: 236 QLVLGKVIASGLDEELANEAKRAVSAEKQRLAKEVASMLKLSVEIDTSSSESLAKIVAAL 295
Query: 307 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
RAGAEYA PV NC L+AGSQSGVAG ++GMPCVV+RS
Sbjct: 296 RAGAEYAGIPVCNCVLVAGSQSGVAGGTQVGMPCVVLRS 334
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532993|ref|XP_003535053.1| PREDICTED: uncharacterized protein LOC100792632 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 237/282 (84%), Gaps = 3/282 (1%)
Query: 67 FSAFSSSSGHDSQNPP---RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
SA SS++ H+ N +DLAVLLEV GVL+D++R GNR AFN AF+KLGLDCANWT
Sbjct: 50 ISASSSTAEHNHPNSSSSSQDLAVLLEVQGVLMDSHRVGNRLAFNKAFEKLGLDCANWTE 109
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDA 183
P+Y+DL ++SAGDE++M+ L+FNRIGWP+S+PTNE+ F K VLQ+K+ AL+EF+ SK
Sbjct: 110 PVYSDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSL 169
Query: 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
PLRPG+E F+DDAYNEGIP+++LTAY KSGD IARS++EKLG +R K+ IVGN+EVE+S
Sbjct: 170 PLRPGLEQFIDDAYNEGIPVVILTAYSKSGDNIARSIMEKLGDDRSIKVIIVGNKEVEQS 229
Query: 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIV 303
LYGQ V GK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDT S ESL KIV
Sbjct: 230 LYGQLVSGKVIASGLDEELAKEAKRAVSAEKQRLAKEVASMLKLSVEIDTGSSESLAKIV 289
Query: 304 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
AALRAGAEYA PV NC L+AGSQSGVAGA ++GMPCVV+RS
Sbjct: 290 AALRAGAEYAGIPVCNCVLVAGSQSGVAGATQVGMPCVVLRS 331
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433515|ref|XP_004134543.1| PREDICTED: uncharacterized protein LOC101206737 [Cucumis sativus] gi|449506776|ref|XP_004162845.1| PREDICTED: uncharacterized protein LOC101226823 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/298 (64%), Positives = 248/298 (83%), Gaps = 2/298 (0%)
Query: 49 STFPRNYNFH-GKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAF 107
S F R+YNF L + +AFSSSS ++ +P ++LAVLLEV+GVLVDAYR NRQAF
Sbjct: 44 SVFSRSYNFIVDSSLRIRRLTAFSSSSSSNNDSP-QELAVLLEVEGVLVDAYRSTNRQAF 102
Query: 108 NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVL 167
N AF+KLGLDCANWT P+Y+DL+RK+A +E+RML+++FNRIGWPTS+PTNEK++F+K+VL
Sbjct: 103 NEAFRKLGLDCANWTEPVYSDLVRKNAANEERMLIMYFNRIGWPTSLPTNEKESFIKSVL 162
Query: 168 QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227
+EKK A DE + S+ PLRPGVEDF+D+A+NEGIP+I+LTAY KSG+ IARS++ KLG E
Sbjct: 163 REKKKASDELMVSQSLPLRPGVEDFIDNAHNEGIPVIILTAYSKSGEEIARSIINKLGPE 222
Query: 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 287
RISK+KIVGNEE+ +SLY +FV G+ SG++E+LA EA KA SA+KQ IA++VAS LKL
Sbjct: 223 RISKVKIVGNEEMRQSLYSEFVSGQAKQSGLEEELAKEAMKAASAEKQRIAKKVASALKL 282
Query: 288 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
SV+I+T+S ESLDKI+ ALRAG+E A PV NC L+AG+QSG+ GA+RIGMP +V+RS
Sbjct: 283 SVEINTTSSESLDKIICALRAGSELAGTPVSNCILVAGTQSGIDGAERIGMPRIVIRS 340
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414869086|tpg|DAA47643.1| TPA: hypothetical protein ZEAMMB73_048619 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/280 (66%), Positives = 226/280 (80%), Gaps = 2/280 (0%)
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
P F SS + PRDL +LLEV+GVL D YRFGNRQAFNVAF+ LGLDCANWT PI
Sbjct: 107 PAPPFRCSSSSPENSAPRDLGLLLEVEGVLADVYRFGNRQAFNVAFRSLGLDCANWTEPI 166
Query: 126 YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPL 185
Y DL+RK+ GDE+RML LFF+RIGWPTS+PT+EK +F+K+VL+EK AL+EF AS PL
Sbjct: 167 YADLVRKACGDEERMLALFFDRIGWPTSLPTSEKGSFIKSVLREKLKALEEFSASDSLPL 226
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245
RPGVE F+DDA EG+PL +L AYG++G++I+RS+ KLG ERISKIKIVGN EVE S Y
Sbjct: 227 RPGVEKFIDDALGEGVPLAILAAYGRNGEKISRSIAMKLGPERISKIKIVGNVEVEESFY 286
Query: 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305
GQ VLGKG++SG+DEQL EA+KA SA+KQ IAE+VAS+LKLSVDI S ES DK++AA
Sbjct: 287 GQLVLGKGVTSGLDEQLVREAQKAASAEKQRIAEKVASILKLSVDITAS--ESSDKVIAA 344
Query: 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
LRAG+EY V++C L+AGSQSGV A+RIGMPC+V+RS
Sbjct: 345 LRAGSEYVGCDVQSCILVAGSQSGVLAAERIGMPCIVVRS 384
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 346 | ||||||
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.826 | 0.768 | 0.613 | 2.3e-94 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.436 | 0.473 | 0.343 | 4e-19 | |
| TAIR|locus:2140050 | 316 | AT4G39970 [Arabidopsis thalian | 0.375 | 0.411 | 0.299 | 9.6e-08 |
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 176/287 (61%), Positives = 226/287 (78%)
Query: 59 GKCLHVNPXXXXXXXXGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC 118
GKCL + + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDC
Sbjct: 53 GKCLRLQRFSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDC 111
Query: 119 ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFL 178
ANW P+Y+DLLRK A DE++ML+L+FN+IGWP+S+PT+EK +FVK+VL+EKKNA+DEFL
Sbjct: 112 ANWPEPVYSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFL 171
Query: 179 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238
SK PLR GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+
Sbjct: 172 ISKSLPLRSGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDN 231
Query: 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPES 298
EVE+S+YGQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E
Sbjct: 232 EVEQSMYGQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSER 291
Query: 299 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345
L+KIV ALRA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 292 LEKIVVALRAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
|
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 55/160 (34%), Positives = 86/160 (53%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLVD + G+R +FN F++ L+ W +Y +LL K G ++RM +F
Sbjct: 78 ALLFDCDGVLVDTEKDGHRISFNDTFKERDLN-VTWDVDLYGELL-KIGGGKERMTA-YF 134
Query: 146 NRIGWPTSVPTNE--KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
N++GWP P +E +K F+ + ++K + K PLRPGV VD A G+ +
Sbjct: 135 NKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKV 194
Query: 204 IVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVER 242
V + S ++ ++V LG ER KIKI + V +
Sbjct: 195 AVCST---SNEKAVSAIVSCLLGPERAEKIKIFAGDVVPK 231
|
|
| TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 125 (49.1 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 44/147 (29%), Positives = 68/147 (46%)
Query: 81 PPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA-------NWTAPIYTDLLRK 132
P R L A++ + DGV++++ +RQA+N AF + C +W+ Y
Sbjct: 59 PLRSLEALIFDCDGVILESENL-HRQAYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNL 117
Query: 133 SAGDEDRMLVLFFNRIGWPTSV-----PTNEK-KAFVKNVLQE-KKNALDEFLASKDAPL 185
G + +M +F GWPTS P N+ +A + + LQ+ K E + S
Sbjct: 118 VGGGKPKMR-WYFKENGWPTSTIFDSPPQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEP 176
Query: 186 RPGVEDFVDDAYNEGIPLIVLTAYGKS 212
RPGV +D+A G L V +A KS
Sbjct: 177 RPGVIRLMDEAKAAGKKLAVCSAATKS 203
|
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00150918 | hypothetical protein (380 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.XIII.601.1 | SubName- Full=Putative uncharacterized protein; (1016 aa) | • | • | 0.508 | ||||||
 | gw1.XIX.851.1 | hypothetical protein (317 aa) | • | • | 0.427 | ||||||
 | fgenesh4_pm.C_LG_X000153 | hypothetical protein (221 aa) | • | • | 0.403 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 346 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 4e-22 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 4e-06 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 7e-05 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 4e-22
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLV+ R G+R AFN AF++ GL W +Y D L G ++RM +F
Sbjct: 42 ALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELY-DELLNIGGGKERM-TWYF 99
Query: 146 NRIGWPTS----VPTNE--KKAFVKNVLQEKKNAL-DEFLASKDAPLRPGVEDFVDDAYN 198
N GWPTS P +E +K V + L ++K L E + S PLRPGV +D+A
Sbjct: 100 NENGWPTSTIEKAPKDEEERKELVDS-LHDRKTELFKELIESGALPLRPGVLRLMDEALA 158
Query: 199 EGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242
GI + V + + + + LG ER + + ++V +
Sbjct: 159 AGIKVAVCSTSNEKAVSKIVNTL--LGPERAQGLDVFAGDDVPK 200
|
Length = 286 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 4e-06
Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 26/143 (18%)
Query: 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN 146
++ ++DG L+D ++A ++LGLD + +L D L
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAE------ELREAGGLPFDEALADLLR 54
Query: 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVL 206
E AL E+ P V + + +G+ L++L
Sbjct: 55 EHP---------------IDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVIL 99
Query: 207 TAYGKSGDR-IARSVVEKLGSER 228
+ +G R ++EKLG
Sbjct: 100 S----NGSREAVERLLEKLGLLD 118
|
Length = 176 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 7e-05
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 20/141 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLF 144
A+L ++DG LVD+ +AFN A +LGL P+ + +R+ G D ++
Sbjct: 6 AILFDLDGTLVDSAE-DILRAFNAALAELGLP------PLDEEEIRQLIGLGLDELIERL 58
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
+ V + ++ L + ++ L PGV++ + + G L
Sbjct: 59 LGEADEEAAAE---------LVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLG 109
Query: 205 VLTAYGKSGDRIARSVVEKLG 225
++T + +++ LG
Sbjct: 110 IVTNKPERE---LDILLKALG 127
|
Length = 220 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 346 | |||
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.94 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.94 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.93 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.93 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.93 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.93 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.93 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.93 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.92 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.92 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.92 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.92 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.92 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.92 | |
| PLN02940 | 382 | riboflavin kinase | 99.91 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.91 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.91 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.9 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.9 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.9 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.9 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.9 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.9 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.89 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.89 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.88 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.87 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.87 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.87 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.86 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.86 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.86 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.85 | |
| PLN02811 | 220 | hydrolase | 99.85 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.85 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.85 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.84 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.81 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.81 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.79 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.79 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.78 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.78 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.77 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.73 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.73 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.69 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.69 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.67 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.66 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.66 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.66 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.65 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.65 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.64 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.64 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.62 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.6 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.58 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.57 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.55 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.55 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.52 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.52 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.5 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.49 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.48 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.48 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.46 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.45 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.41 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.4 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.38 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.37 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.36 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.31 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.31 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.27 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.25 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.24 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.23 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.2 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.2 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.17 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.16 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.15 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.14 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.14 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.09 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.07 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.05 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.02 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.0 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.97 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.94 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 98.93 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.88 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.85 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.84 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.82 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.8 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.79 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.78 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.75 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.74 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.72 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.69 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 98.69 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.67 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.65 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.65 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.63 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.61 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.61 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.55 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.48 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.45 | |
| PLN02887 | 580 | hydrolase family protein | 98.44 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.43 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.43 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.42 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.39 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.31 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.31 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.23 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.18 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.14 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.09 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.08 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.08 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.07 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.06 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.05 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.0 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.97 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.95 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.86 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.86 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 97.79 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.75 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.74 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.68 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.68 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.67 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.56 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.42 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.41 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.41 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.36 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.36 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.34 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.28 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.23 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.08 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.98 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.98 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 96.95 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 96.92 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 96.86 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 96.84 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 96.81 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.78 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.71 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 96.68 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.59 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.48 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.39 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.37 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.24 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.18 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.01 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 95.99 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 95.89 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.85 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.84 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 95.76 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.63 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.54 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 95.38 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 95.28 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.22 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.2 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 94.65 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 94.58 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.46 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.31 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 94.27 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 94.25 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 93.93 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.79 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.71 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 93.53 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.24 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 92.92 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 92.72 | |
| PLN02423 | 245 | phosphomannomutase | 92.23 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 91.97 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 91.7 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 91.58 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 91.47 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 91.09 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 90.58 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.45 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 90.02 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 89.79 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 89.64 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 89.39 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 88.99 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 88.7 | |
| PLN02423 | 245 | phosphomannomutase | 88.68 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 86.92 | |
| PLN03017 | 366 | trehalose-phosphatase | 86.32 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 85.63 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 85.39 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 85.19 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 84.5 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 84.24 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 83.84 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 83.8 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 83.12 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 81.09 | |
| PLN02580 | 384 | trehalose-phosphatase | 81.06 |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-27 Score=213.53 Aligned_cols=186 Identities=23% Similarity=0.323 Sum_probs=139.4
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++|||||||||+|+++. +.++|.++++++|+. .+.+.+....+ +...+....+........... .
T Consensus 2 ~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~-~------ 67 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELHG---GGIARIIDLLRKLAAGEDPAD-L------ 67 (221)
T ss_pred CcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHHC---CChHHHHHHHHHHhcCCcccC-H------
Confidence 689999999999999997 889999999999997 55555555543 233343334444433221111 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
........... .......++.||+.++|+.|+++|+++++.|+ +.+..++..+..+|+.++|+..+.+.
T Consensus 68 ~~~~~~~~~~~--~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~v~~~------ 136 (221)
T COG0637 68 AELERLLYEAE--ALELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVIVTAD------ 136 (221)
T ss_pred HHHHHHHHHHH--HhhhcCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchhccHH------
Confidence 01111111111 12234578999999999999999999999999 66788999999999999887743332
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
++..+ ||+|++ |..++++||+.|++||+|
T Consensus 137 ---------dv~~~----------------------------KP~Pd~--------------yL~Aa~~Lgv~P~~Cvvi 165 (221)
T COG0637 137 ---------DVARG----------------------------KPAPDI--------------YLLAAERLGVDPEECVVV 165 (221)
T ss_pred ---------HHhcC----------------------------CCCCHH--------------HHHHHHHcCCChHHeEEE
Confidence 22222 899999 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|+.++|.+|++|||.+|++++
T Consensus 166 EDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 166 EDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred ecchhHHHHHHHCCCEEEEecC
Confidence 9999999999999999999975
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=203.19 Aligned_cols=187 Identities=16% Similarity=0.168 Sum_probs=140.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHH-HHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD-LLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
+|+||||+||||+|+... +..+|.++++++|++ .+...+.. +.+ .....+.+.+....+.+ ..+
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~----~~~---- 65 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLS---PTPEEVQSAWMG---QSKIEAIRALLALDGAD----EAE---- 65 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCC---CCHHHHHHhhcC---CCHHHHHHHHHhccCCC----HHH----
Confidence 479999999999999986 889999999999997 33333333 332 23344444555544432 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc--cchhheecchhhH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEV 240 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~e~ 240 (346)
.+.+...+.+.+.........+++||+.++|+.|+++|++++|+|| +....+..+++.+|+. .+|+..+.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~---~~~~~~~~~l~~~~l~~~~~f~~i~~~~--- 139 (220)
T TIGR03351 66 AQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTG---FDRDTAERLLEKLGWTVGDDVDAVVCPS--- 139 (220)
T ss_pred HHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHHhhhhhhccCCEEEcCC---
Confidence 2344455555555544334568999999999999999999999999 6788899999999998 8887643322
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC-CCc
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRN 319 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~-p~e 319 (346)
.+.. .||+|++ |+.+++++|+. |++
T Consensus 140 ------------~~~~----------------------------~KP~p~~--------------~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 140 ------------DVAA----------------------------GRPAPDL--------------ILRAMELTGVQDVQS 165 (220)
T ss_pred ------------cCCC----------------------------CCCCHHH--------------HHHHHHHcCCCChhH
Confidence 1111 2788887 99999999997 799
Q ss_pred EEEEcCChhhHHHHHHcCCCE-EEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPC-VVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~-i~v~~ 345 (346)
|+||||+..|+.+|+++||.+ |++++
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~ 192 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLT 192 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEec
Confidence 999999999999999999999 88865
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=206.54 Aligned_cols=190 Identities=16% Similarity=0.117 Sum_probs=136.4
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHH----------HHHHHHHHhCCCCC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWPTS 153 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~~~ 153 (346)
+++||||+||||+|+....+..+|.+++.++|.+ ++.+.+....+. .... ....+...++.+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMGL---GKWDHIRALLKMPAVAERWRAKFGRLP- 74 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcCc---cHHHHHHHHhcCHHHHHHHHHHhCCCC-
Confidence 6899999999999986533468999999999986 444443333221 1111 1222344444321
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-hh
Q 019086 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI 232 (346)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f-~~ 232 (346)
..+ .+..+...+...+.+.+ .....++||+.++|+.|+++|++++|+|| +....++.+++++|+..+| +.
T Consensus 75 -~~~----~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~---~~~~~~~~~l~~~gl~~~f~d~ 145 (253)
T TIGR01422 75 -TEA----DIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTG---YTREMMDVVAPEAALQGYRPDY 145 (253)
T ss_pred -CHH----HHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHHHHhcCCCCce
Confidence 111 12334444444444444 33567999999999999999999999999 6788899999999999875 54
Q ss_pred eecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHH
Q 019086 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (346)
Q Consensus 233 ~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~ 312 (346)
. ++.+++ . ..||+|++ |..++++
T Consensus 146 i-i~~~~~--------------~----------------------------~~KP~p~~--------------~~~a~~~ 168 (253)
T TIGR01422 146 N-VTTDDV--------------P----------------------------AGRPAPWM--------------ALKNAIE 168 (253)
T ss_pred E-EccccC--------------C----------------------------CCCCCHHH--------------HHHHHHH
Confidence 3 333222 1 12788888 9999999
Q ss_pred cCCC-CCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 313 AEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 313 lgv~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|+. |++|++|||+.+||.+|+++||.+|+|.++
T Consensus 169 l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 169 LGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred cCCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence 9995 999999999999999999999999999764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=208.88 Aligned_cols=192 Identities=17% Similarity=0.219 Sum_probs=137.4
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCC-CCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCCh
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 157 (346)
+..+++++||||+||||+|+... +..+|.++++++|++. ..++.+.+...+ .+.....+...+ +.. .. +
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~--~G~~~~~~~~~~---~~~--~~--~ 86 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENI--AGKHNEDIALGL---FPD--DL--E 86 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHc--CCCCHHHHHHHH---cCc--ch--h
Confidence 34456899999999999999986 7899999999997531 013333322111 111222222221 111 11 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
. ...+...+...|.... ....+++||+.++|+.|+++|++++|+|| +....++..++++|+.++|+..+.+.
T Consensus 87 ~----~~~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~iv~~~ 158 (248)
T PLN02770 87 R----GLKFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTN---APRENAELMISLLGLSDFFQAVIIGS 158 (248)
T ss_pred h----HHHHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCChhhCcEEEecC
Confidence 1 1123334444555544 34577999999999999999999999999 67899999999999999887643332
Q ss_pred hhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 019086 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (346)
Q Consensus 238 ~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p 317 (346)
.+.. .||+|++ |..+++++|++|
T Consensus 159 ---------------~~~~----------------------------~KP~p~~--------------~~~a~~~~~~~~ 181 (248)
T PLN02770 159 ---------------ECEH----------------------------AKPHPDP--------------YLKALEVLKVSK 181 (248)
T ss_pred ---------------cCCC----------------------------CCCChHH--------------HHHHHHHhCCCh
Confidence 2211 2788877 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|++|||+..|+++|+++||.+|+|.+
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 9999999999999999999999999975
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=208.30 Aligned_cols=203 Identities=30% Similarity=0.524 Sum_probs=144.2
Q ss_pred CCceEEEEeccCcccccc-ccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCC----CCC--
Q 019086 82 PRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWP----TSV-- 154 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~-~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~----~~~-- 154 (346)
.++++|||||||||+|+. .. +..+|.++++++|++...++.+.+..+.. .++....+... +...+++ ...
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLN-IGGGKERMTWY-FNENGWPTSTIEKAPK 114 (286)
T ss_pred cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHH-HHHcCCCccccccCCc
Confidence 357999999999999999 76 78999999999999422355555544443 33333444333 3445554 111
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh-e
Q 019086 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-K 233 (346)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~-~ 233 (346)
..+.....++.+...+...|...+....++++||+.++|+.|+++|++++|+|| +....+..+++.++...+++. .
T Consensus 115 ~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn---~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCST---SNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhccccccCceE
Confidence 122233344455555556666665333468999999999999999999999999 567778888887754444432 1
Q ss_pred ecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc
Q 019086 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (346)
Q Consensus 234 i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l 313 (346)
+++. +.+ ...||+|++ |..+++++
T Consensus 192 ~v~~--------------~~~----------------------------~~~KP~p~~--------------~~~a~~~~ 215 (286)
T PLN02779 192 VFAG--------------DDV----------------------------PKKKPDPDI--------------YNLAAETL 215 (286)
T ss_pred EEec--------------ccc----------------------------CCCCCCHHH--------------HHHHHHHh
Confidence 2222 111 122888888 99999999
Q ss_pred CCCCCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 314 gv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
|++|++|+||||+.+||++|+++||.+|+|.++
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 999999999999999999999999999999753
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-25 Score=203.83 Aligned_cols=186 Identities=19% Similarity=0.250 Sum_probs=136.8
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++||||+||||+|+... +..+|+.+++++|.+ .++.+.+....+. ....+.... .+ . ....+ .
T Consensus 12 ~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~---~~~~~~~~~---~~-~--~~~~~----~ 75 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRA--PITLAQLRPVVSK---GARAMLAVA---FP-E--LDAAA----R 75 (229)
T ss_pred CCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhhh---HHHHHHHHH---hc-c--CChHH----H
Confidence 589999999999999987 889999999999987 3555555444432 122221111 11 1 11111 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
+++.+.+...|.... ....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|+.. ++.+
T Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn---~~~~~~~~~l~~~~l~~~f~~i-~~~~----- 145 (229)
T PRK13226 76 DALIPEFLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTN---KPEYLARLILPQLGWEQRCAVL-IGGD----- 145 (229)
T ss_pred HHHHHHHHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCchhcccEE-EecC-----
Confidence 334444555555444 23467999999999999999999999999 6678888899999998887753 2221
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
.+. ..||+|++ |..+++++|++|++|++|
T Consensus 146 ---------~~~----------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 146 ---------TLA----------------------------ERKPHPLP--------------LLVAAERIGVAPTDCVYV 174 (229)
T ss_pred ---------cCC----------------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEe
Confidence 111 12788887 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecCC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
||+.+|+.+|+++||.+|+|.++
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g 197 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWG 197 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeec
Confidence 99999999999999999998753
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=200.41 Aligned_cols=184 Identities=10% Similarity=0.129 Sum_probs=135.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+++|+||+||||+|+... +..+|.+++++++.. ..+.+.+....+. ..... +..+. ...
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~--~~~~~~~~~~~G~---~~~~~----~~~~~------~~~--- 61 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPN--QYKREDVLPFIGP---SLHDT----FSKID------ESK--- 61 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCC--CCCHHHHHHHhCc---CHHHH----HHhcC------HHH---
Confidence 46889999999999999986 789999999998875 2444444444321 22222 22221 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.+.+...+...+.... .....++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|+..+ +.
T Consensus 62 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~i~-~~---- 131 (214)
T PRK13288 62 -VEEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTT---KMRDTVEMGLKLTGLDEFFDVVI-TL---- 131 (214)
T ss_pred -HHHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhceeEEE-ec----
Confidence 2233333333333322 23467999999999999999999999999 66788999999999999887643 22
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
+.+. ..||+|++ |+.+++++|++|++|+
T Consensus 132 ----------~~~~----------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 132 ----------DDVE----------------------------HAKPDPEP--------------VLKALELLGAKPEEAL 159 (214)
T ss_pred ----------CcCC----------------------------CCCCCcHH--------------HHHHHHHcCCCHHHEE
Confidence 1111 12788777 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecCC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|||+.+|+++|+++|+.+|+|.++
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEEEcCC
Confidence 9999999999999999999998763
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=198.01 Aligned_cols=186 Identities=22% Similarity=0.272 Sum_probs=138.0
Q ss_pred EEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHHH
Q 019086 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNV 166 (346)
Q Consensus 87 viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 166 (346)
||||+||||+|+... +..+++++++++|++ .++...+....+. ....+...+....+.+.. . ..++.+
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~--~----~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLP--PATLARVIGFIGN---GVPVLMERVLAWAGQEPD--A----QRVAEL 68 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhcc---cHHHHHHHHhhccccccC--h----HHHHHH
Confidence 699999999999886 678999999999987 3555554444322 222333344444433211 1 113344
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhh
Q 019086 167 LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246 (346)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~ 246 (346)
...+.+.|.+.. ....+++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+.. ++.++
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~------- 136 (213)
T TIGR01449 69 RKLFDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTN---KPTPLARPLLELLGLAKYFSVL-IGGDS------- 136 (213)
T ss_pred HHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCcHhhCcEE-EecCC-------
Confidence 455555555544 33467999999999999999999999999 6678899999999999887753 22211
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 019086 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (346)
Q Consensus 247 ~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs 326 (346)
+. ..||+|++ |..+++++|++|++|++|||+
T Consensus 137 -------~~----------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs 167 (213)
T TIGR01449 137 -------LA----------------------------QRKPHPDP--------------LLLAAERLGVAPQQMVYVGDS 167 (213)
T ss_pred -------CC----------------------------CCCCChHH--------------HHHHHHHcCCChhHeEEeCCC
Confidence 11 12788777 999999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEecC
Q 019086 327 QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~ 345 (346)
.+|+.+|+++||.+|+|.+
T Consensus 168 ~~d~~aa~~aG~~~i~v~~ 186 (213)
T TIGR01449 168 RVDIQAARAAGCPSVLLTY 186 (213)
T ss_pred HHHHHHHHHCCCeEEEEcc
Confidence 9999999999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=199.02 Aligned_cols=189 Identities=19% Similarity=0.279 Sum_probs=137.7
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCCh-HHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
.+.+++|+||+||||+|+... +..++.++++++|++ .+. .......+ .....+...+....++... ..
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~----~~ 72 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVD---ISRREELPDTLG---LRIDQVVDLWYARQPWNGP----SR 72 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCC---CCHHHHHHHhhC---CCHHHHHHHHHHhcCCCCC----CH
Confidence 335899999999999999886 779999999999987 332 33333332 2233333344444444211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhh
Q 019086 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (346)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e 239 (346)
+.+.....+.+.+.+ .....++||+.++|..|+++|++++|+|| +....++.+++.+|+..+|+..+.+. +
T Consensus 73 ----~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~~~~~-~ 143 (222)
T PRK10826 73 ----QEVVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASA---SPLHMLEAVLTMFDLRDYFDALASAE-K 143 (222)
T ss_pred ----HHHHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHhCcchhcccEEEEcc-c
Confidence 122222333333333 23467999999999999999999999999 66788999999999999887643222 1
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
+. ..||+|++ |+.+++++|++|++
T Consensus 144 --------------~~----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~ 167 (222)
T PRK10826 144 --------------LP----------------------------YSKPHPEV--------------YLNCAAKLGVDPLT 167 (222)
T ss_pred --------------CC----------------------------CCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 11 12777777 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|||+.+|+++|+++||++|++.+
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~ 193 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPA 193 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecC
Confidence 99999999999999999999999875
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-25 Score=193.58 Aligned_cols=184 Identities=23% Similarity=0.317 Sum_probs=134.6
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
+||||+||||+|+... +..+|.+++.++|++ ++......+.+ .........+..+.+.+. +.+. +..
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~--~~~~----~~~ 67 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKG---VSREDSLERILDLGGKKY--SEEE----KEE 67 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CChHHHHHHHHHhcCCCC--CHHH----HHH
Confidence 5899999999999987 789999999999987 55544443332 233445555666666532 2222 223
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhh
Q 019086 166 VLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (346)
Q Consensus 166 l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~ 244 (346)
+.+.+...|.+.+.. ....++||+.++|+.|+++|++++|+||. ......++.+|+..+|+..+.+. +.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~-----~~~~~~l~~~~l~~~f~~~~~~~-~~---- 137 (185)
T TIGR01990 68 LAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASAS-----KNAPTVLEKLGLIDYFDAIVDPA-EI---- 137 (185)
T ss_pred HHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCC-----ccHHHHHHhcCcHhhCcEEEehh-hc----
Confidence 333344444443321 23468999999999999999999999983 23467899999999887743222 11
Q ss_pred hhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEc
Q 019086 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (346)
Q Consensus 245 f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VG 324 (346)
...||+|++ |+.++++++++|++|++||
T Consensus 138 --------------------------------------~~~kp~p~~--------------~~~~~~~~~~~~~~~v~vg 165 (185)
T TIGR01990 138 --------------------------------------KKGKPDPEI--------------FLAAAEGLGVSPSECIGIE 165 (185)
T ss_pred --------------------------------------CCCCCChHH--------------HHHHHHHcCCCHHHeEEEe
Confidence 122788887 9999999999999999999
Q ss_pred CChhhHHHHHHcCCCEEEec
Q 019086 325 GSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~ 344 (346)
|+.+|+.+|+++||++|+|+
T Consensus 166 D~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 166 DAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred cCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=191.79 Aligned_cols=185 Identities=22% Similarity=0.317 Sum_probs=135.8
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++|+||+||||+|+... +..+|.++++++|++ ++......+.+ .........+...++.. ++.++ +
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~--~~~~~----~ 67 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQYNTSLGG---LSREDILRAILKLRKPG--LSLET----I 67 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHHHHHHcCC---CCHHHHHHHHHHhcCCC--CCHHH----H
Confidence 479999999999999986 788999999999987 44333222221 12333444455544321 22122 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
..+...+...|.+.+......++||+.++|+.|+++|++++++|| + ..++.+++.+|+.++|+..+ +.++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~---~--~~~~~~l~~~~l~~~f~~v~-~~~~~--- 138 (185)
T TIGR02009 68 HQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSS---S--KNADRILAKLGLTDYFDAIV-DADEV--- 138 (185)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeC---c--hhHHHHHHHcChHHHCCEee-ehhhC---
Confidence 344455555555554334578999999999999999999999999 4 56888999999999887643 22111
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
...||+|++ |+.+++++|++|++|++|
T Consensus 139 ---------------------------------------~~~kp~~~~--------------~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 139 ---------------------------------------KEGKPHPET--------------FLLAAELLGVSPNECVVF 165 (185)
T ss_pred ---------------------------------------CCCCCChHH--------------HHHHHHHcCCCHHHeEEE
Confidence 123788777 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEe
Q 019086 324 AGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v 343 (346)
||+.+|+++|+++||++|.|
T Consensus 166 gD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 166 EDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999976
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=204.27 Aligned_cols=191 Identities=19% Similarity=0.249 Sum_probs=136.9
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCChHHHHHHHHHHhCCCCCCCCh
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 157 (346)
.....+|+|||||||||+|+....+..+|+++++++|++ ++.. .+....+ .....+...+ +++.. ..+
T Consensus 19 ~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~---~~~~e~~~~~~G---~~~~~~~~~l---~~~~~--~~~ 87 (260)
T PLN03243 19 RLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKR---PPPAFLLKRAEG---MKNEQAISEV---LCWSR--DFL 87 (260)
T ss_pred HhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCC---CCHHHHHHHhcC---CCHHHHHHHH---hccCC--CHH
Confidence 344578999999999999996432668999999999997 3332 2222222 2222232222 22211 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.+..+...+...+.. ......+++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+..+.+
T Consensus 88 ----~~~~l~~~~~~~~~~-~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~ii~~- 158 (260)
T PLN03243 88 ----QMKRLAIRKEDLYEY-MQGGLYRLRPGSREFVQALKKHEIPIAVAST---RPRRYLERAIEAVGMEGFFSVVLAA- 158 (260)
T ss_pred ----HHHHHHHHHHHHHHH-HHccCcccCCCHHHHHHHHHHCCCEEEEEeC---cCHHHHHHHHHHcCCHhhCcEEEec-
Confidence 123333444444432 2234567899999999999999999999999 6678899999999999988764333
Q ss_pred hhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 019086 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (346)
Q Consensus 238 ~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p 317 (346)
+.+.. .||+|++ |..+++++|++|
T Consensus 159 --------------~d~~~----------------------------~KP~Pe~--------------~~~a~~~l~~~p 182 (260)
T PLN03243 159 --------------EDVYR----------------------------GKPDPEM--------------FMYAAERLGFIP 182 (260)
T ss_pred --------------ccCCC----------------------------CCCCHHH--------------HHHHHHHhCCCh
Confidence 22211 2888888 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|+||||+..|+.+|+++||.+|++.+
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 9999999999999999999999999863
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=201.76 Aligned_cols=192 Identities=17% Similarity=0.117 Sum_probs=134.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHH----------HHHHHHHHhCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWP 151 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~ 151 (346)
|++|+||||+||||+|+....+..+|++++.++|++ ++.+.+...++ ..... ....+...++.+
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~~g~~ 75 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVE---ITLEEARGPMG---LGKWDHIRALLKMPRVAARWQAVFGRL 75 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHhcHHHHHHHHHHhCCC
Confidence 357999999999999986432368999999999986 44433332222 11111 111223334432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-
Q 019086 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS- 230 (346)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f- 230 (346)
. ..+ .+..+...+...+.+.. .....++||+.++|+.|+++|++++|+|| +....+..+++.+++..+|
T Consensus 76 ~--~~~----~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~---~~~~~~~~~l~~~~l~~~~~ 145 (267)
T PRK13478 76 P--TEA----DVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTG---YTREMMDVVVPLAAAQGYRP 145 (267)
T ss_pred C--CHH----HHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHHhhcCCCc
Confidence 1 111 12333444444444433 33467999999999999999999999999 6678888999999988764
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+. +++.++ +. ..||+|++ |..++
T Consensus 146 d~-i~~~~~--------------~~----------------------------~~KP~p~~--------------~~~a~ 168 (267)
T PRK13478 146 DH-VVTTDD--------------VP----------------------------AGRPYPWM--------------ALKNA 168 (267)
T ss_pred eE-EEcCCc--------------CC----------------------------CCCCChHH--------------HHHHH
Confidence 44 333322 11 12788887 99999
Q ss_pred HHcCCC-CCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 311 EYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 311 e~lgv~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+++|+. +++|+||||+.+|+.+|+++||.+|+|.++
T Consensus 169 ~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 169 IELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 999996 699999999999999999999999999764
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=195.63 Aligned_cols=183 Identities=17% Similarity=0.242 Sum_probs=126.2
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|++++||||+||||+|+... +..+|+++++++|++. ..+.... .+.......+.+.. . ...++
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~-----~~~~~~~--~g~~~~~~~~~~~~----~--~~~~~--- 63 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP-----DEVLNFI--HGKQAITSLRHFMA----G--ASEAE--- 63 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH-----HHHHHHH--cCCCHHHHHHHHhc----c--CCcHH---
Confidence 56899999999999999986 7899999999999872 1111111 11222222222211 1 11111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
+.+.. ... ..+.... .....++||+.++|+.|+++|++++|+|| +........++.+|+. +|+. +++.++.
T Consensus 64 ~~~~~-~~~-~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn---~~~~~~~~~l~~~~l~-~~~~-i~~~~~~- 134 (218)
T PRK11587 64 IQAEF-TRL-EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTS---GSVPVASARHKAAGLP-APEV-FVTAERV- 134 (218)
T ss_pred HHHHH-HHH-HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcC---CCchHHHHHHHhcCCC-CccE-EEEHHHh-
Confidence 11111 111 1111222 24567999999999999999999999999 5556677778888884 3433 3333222
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
...||+|++ |..+++++|+.|++|+
T Consensus 135 -----------------------------------------~~~KP~p~~--------------~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 135 -----------------------------------------KRGKPEPDA--------------YLLGAQLLGLAPQECV 159 (218)
T ss_pred -----------------------------------------cCCCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 123888888 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+..|+++|+++||.+|+|.+
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEECC
Confidence 999999999999999999999975
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=196.26 Aligned_cols=190 Identities=21% Similarity=0.267 Sum_probs=137.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+++|+||+||||+|+... +..+++.+++++|.+. .+........+. ....+.. ...+.... +....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~---~~~~~~~---~~~~~~~~---~~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGL---GLDELIE---RLLGEADE---EAAAE 69 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcC---CHHHHHH---HHhccccc---hhHHH
Confidence 56889999999999999986 7899999999999983 454554444432 2222222 11221111 11002
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.++.+...+.+.+.+.. ...++||+.++|+.|+++|++++|+|| ..+..++.+++.+|+..+|+..+- .++
T Consensus 70 ~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i~g-~~~-- 140 (220)
T COG0546 70 LVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVIVG-GDD-- 140 (220)
T ss_pred HHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceEEc-CCC--
Confidence 23333333333333322 246999999999999999999999999 778999999999999999887532 111
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
. ...||+|.. +..+++.+|++|++++
T Consensus 141 ------------~----------------------------~~~KP~P~~--------------l~~~~~~~~~~~~~~l 166 (220)
T COG0546 141 ------------V----------------------------PPPKPDPEP--------------LLLLLEKLGLDPEEAL 166 (220)
T ss_pred ------------C----------------------------CCCCcCHHH--------------HHHHHHHhCCChhheE
Confidence 1 112677776 9999999999988999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecCC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
||||+.+||.||++||+.+|.|+++
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECC
Confidence 9999999999999999999999874
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=211.42 Aligned_cols=188 Identities=16% Similarity=0.232 Sum_probs=139.6
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
..++|||||||||+|+....+..+|.++++++|++. ...+.+....+ .....++..+.. +. .... .
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~G---~~~~~~l~~ll~---~~--~~~~----~ 195 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVEG---MKNEQAISEVLC---WS--RDPA----E 195 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhcC---CCHHHHHHHHhh---cc--CCHH----H
Confidence 678999999999999886326679999999999972 22223333332 223333333222 11 1111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
++.+...+.+.|.+.. .....++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+..+.+
T Consensus 196 ~e~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~Iv~s------ 265 (381)
T PLN02575 196 LRRMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVIVAA------ 265 (381)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEEEec------
Confidence 3455555666665555 34567999999999999999999999999 6789999999999999988764322
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
+.+.. .||+|++ |..+++++|+.|++|++
T Consensus 266 ---------ddv~~----------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 266 ---------EDVYR----------------------------GKPDPEM--------------FIYAAQLLNFIPERCIV 294 (381)
T ss_pred ---------CcCCC----------------------------CCCCHHH--------------HHHHHHHcCCCcccEEE
Confidence 22211 2888888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+..||++|+++||.+|+|.+
T Consensus 295 IGDS~~DIeAAk~AGm~~IgV~~ 317 (381)
T PLN02575 295 FGNSNQTVEAAHDARMKCVAVAS 317 (381)
T ss_pred EcCCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999975
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=190.03 Aligned_cols=184 Identities=20% Similarity=0.262 Sum_probs=134.3
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
++++|+||+||||+|+... +..+|.+++.++|.+ ++........ +.....+...+....+.+. .
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~--~------- 67 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVALN---GSPTWRIAQAIIELNQADL--D------- 67 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhc---CCCHHHHHHHHHHHhCCCC--C-------
Confidence 4789999999999999886 789999999999986 4433322222 2223334445555544321 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
.+.+...+...+.... .....++|+ .++|..|+++ ++++|+|| +....++..++.+|+..+|+.. ++.++.
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~fd~i-~~~~~~-- 138 (188)
T PRK10725 68 PHALAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRYFDAV-VAADDV-- 138 (188)
T ss_pred HHHHHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhHceEE-Eehhhc--
Confidence 1122233333444443 234567886 5899999876 89999999 6788999999999999988864 333222
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
...||+|++ |+.+++++|++|++||+
T Consensus 139 ----------------------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 139 ----------------------------------------QHHKPAPDT--------------FLRCAQLMGVQPTQCVV 164 (188)
T ss_pred ----------------------------------------cCCCCChHH--------------HHHHHHHcCCCHHHeEE
Confidence 123888888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+|+++|+++|+++|.|+.
T Consensus 165 igDs~~di~aA~~aG~~~i~~~~ 187 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVDVRL 187 (188)
T ss_pred EeccHhhHHHHHHCCCEEEeecC
Confidence 99999999999999999999863
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-24 Score=194.12 Aligned_cols=184 Identities=15% Similarity=0.245 Sum_probs=135.1
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCCh-HHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
++++|+||+||||+|+... +..+|.+++.++|++ .+. +.+..+.+. ....+...+...++.+...
T Consensus 3 ~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~------- 68 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGIT---LSLEEVFKRFKGV---KLYEIIDIISKEHGVTLAK------- 68 (221)
T ss_pred CCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcCC---CHHHHHHHHHHHhCCCCCH-------
Confidence 5889999999999999886 679999999999986 332 233332221 2334555566666654221
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
+.+...+...+.... ....+++||+.++|+.| +++++|+|| +....+...++++|+..+|+..+++.++.
T Consensus 69 --~~~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn---~~~~~~~~~l~~~~l~~~F~~~v~~~~~~- 138 (221)
T PRK10563 69 --AELEPVYRAEVARLF-DSELEPIAGANALLESI---TVPMCVVSN---GPVSKMQHSLGKTGMLHYFPDKLFSGYDI- 138 (221)
T ss_pred --HHHHHHHHHHHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeC---CcHHHHHHHHHhcChHHhCcceEeeHHhc-
Confidence 122222232222222 23477999999999999 499999999 66788999999999999986444444322
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
...||+|++ |..+++++|++|++|+
T Consensus 139 -----------------------------------------~~~KP~p~~--------------~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 139 -----------------------------------------QRWKPDPAL--------------MFHAAEAMNVNVENCI 163 (221)
T ss_pred -----------------------------------------CCCCCChHH--------------HHHHHHHcCCCHHHeE
Confidence 122888888 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||||+..||++|+++||++|+++.
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYFCA 187 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEECC
Confidence 999999999999999999998853
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=207.41 Aligned_cols=186 Identities=19% Similarity=0.291 Sum_probs=141.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
..+++||||+||||+|+... +..+|.++++++|++ ++...+....+ .....+...++.+++.+..
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~-------- 73 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVG---KTPLEAAATVVEDYGLPCS-------- 73 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHHHhCCCCC--------
Confidence 34889999999999999986 789999999999987 55555444333 2334455566676665422
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHH-HhCcccchhheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~-~lgl~~~f~~~i~~~~e~ 240 (346)
.+.+.....+.+.+.. ....++||+.++|+.|+++|++++|+|| +....+...++ .+|+.++|+..+ +.++
T Consensus 74 -~~~~~~~~~~~~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn---~~~~~~~~~l~~~~gl~~~Fd~ii-~~d~- 145 (382)
T PLN02940 74 -TDEFNSEITPLLSEQW--CNIKALPGANRLIKHLKSHGVPMALASN---SPRANIEAKISCHQGWKESFSVIV-GGDE- 145 (382)
T ss_pred -HHHHHHHHHHHHHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHhccChHhhCCEEE-ehhh-
Confidence 1133333344443333 2366899999999999999999999999 66777777876 789988887643 3222
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
+ ...||+|++ |..+++++|++|++|
T Consensus 146 -------------v----------------------------~~~KP~p~~--------------~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 146 -------------V----------------------------EKGKPSPDI--------------FLEAAKRLNVEPSNC 170 (382)
T ss_pred -------------c----------------------------CCCCCCHHH--------------HHHHHHHcCCChhHE
Confidence 1 123888888 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|||+..|+++|+++||.+|+|++
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPS 195 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999976
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-23 Score=188.33 Aligned_cols=193 Identities=19% Similarity=0.206 Sum_probs=140.8
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.+++++|+||+||||+|+... +..+|.++++++|.+ .++...+..+.+. ....+....+...+.. ++.++
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~--~~~~~-- 72 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLP--PAGEERVRTWVGN---GADVLVERALTWAGRE--PDEEL-- 72 (226)
T ss_pred CCcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCc---cHHHHHHHHHhhccCC--ccHHH--
Confidence 356889999999999999875 678999999999987 3454444443321 2333333333332211 22222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
++.+...+...|.... .....++||+.++|+.|+++|++++|+|| +.....+.+++++|+..+|+.. ++.
T Consensus 73 --~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~--- 142 (226)
T PRK13222 73 --LEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTN---KPTPFVAPLLEALGIADYFSVV-IGG--- 142 (226)
T ss_pred --HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCccCccEE-EcC---
Confidence 3344445555555544 23467999999999999999999999999 6678889999999998877653 222
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
+.+. ..||+|++ |+.+++++++++++|
T Consensus 143 -----------~~~~----------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 143 -----------DSLP----------------------------NKKPDPAP--------------LLLACEKLGLDPEEM 169 (226)
T ss_pred -----------CCCC----------------------------CCCcChHH--------------HHHHHHHcCCChhhe
Confidence 1111 12777777 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
++|||+.+|+++|+++|+++|+|.++
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcC
Confidence 99999999999999999999998753
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=187.65 Aligned_cols=183 Identities=17% Similarity=0.240 Sum_probs=124.5
Q ss_pred eEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHH-HHHhh-------------ccCCh-H----HHHHHHH
Q 019086 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-DLLRK-------------SAGDE-D----RMLVLFF 145 (346)
Q Consensus 85 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~-~~~~~-------------~~g~~-~----~~~~~~~ 145 (346)
|+|+||+||||+|+... +..++.++++++|++ ++..... .+... ..|.. . .+....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVE---VSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999875 778999999999997 3332221 11110 00211 1 1122223
Q ss_pred HHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC
Q 019086 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (346)
Q Consensus 146 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg 225 (346)
...+.+. .+ .+.......+..+.......++||+.++|+.|+++|++++|+||. ... ....++.+|
T Consensus 77 ~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---~~~-~~~~l~~~~ 142 (203)
T TIGR02252 77 GRAGVPD---PE-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNF---DSR-LRGLLEALG 142 (203)
T ss_pred HhcCCCC---ch-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCC---chh-HHHHHHHCC
Confidence 3333211 01 112222222222221234578999999999999999999999994 333 577889999
Q ss_pred cccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHH
Q 019086 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (346)
Q Consensus 226 l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~ 305 (346)
+..+|+..+.+.+ + ...||+|++
T Consensus 143 l~~~fd~i~~s~~---------------~----------------------------~~~KP~~~~-------------- 165 (203)
T TIGR02252 143 LLEYFDFVVTSYE---------------V----------------------------GAEKPDPKI-------------- 165 (203)
T ss_pred cHHhcceEEeecc---------------c----------------------------CCCCCCHHH--------------
Confidence 9988876543321 1 122888887
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~ 342 (346)
|+.+++++|++|++|++|||+. +||.+|+++||.+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999997 899999999999985
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=189.80 Aligned_cols=187 Identities=18% Similarity=0.159 Sum_probs=123.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHH---HHHcCCCCCCCChHHHHHHHhh----ccCChHHHHHHHHHHhCCCCCCCC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLRK----SAGDEDRMLVLFFNRIGWPTSVPT 156 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~---~~~~gi~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~g~~~~~~~ 156 (346)
+++|+||+||||+|+... +..++..+ +.++|++ ++.+.+...+.. .+.............++... .
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 74 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLN---VDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEY--N- 74 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCc---CCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhc--C-
Confidence 689999999999999876 55666544 4566776 333322221111 00000000111111111100 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
.+.+ ......+.... ....+++||+.++|++|+++|++++|+|| +....+...++.+|+..+|+..+.+
T Consensus 75 ------~~~~-~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~f~~i~~~ 143 (221)
T TIGR02253 75 ------PKLV-AAFVYAYHKLK-FAYLRVYPGVRDTLMELRESGYRLGIITD---GLPVKQWEKLERLGVRDFFDAVITS 143 (221)
T ss_pred ------HHHH-HHHHHHHHHHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHhCChHHhccEEEEe
Confidence 0011 11111121211 22357999999999999999999999999 6667788999999999988765433
Q ss_pred hhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 019086 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (346)
Q Consensus 237 ~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~ 316 (346)
. .+. ..||+|++ |+.+++++|++
T Consensus 144 ~---------------~~~----------------------------~~KP~~~~--------------~~~~~~~~~~~ 166 (221)
T TIGR02253 144 E---------------EEG----------------------------VEKPHPKI--------------FYAALKRLGVK 166 (221)
T ss_pred c---------------cCC----------------------------CCCCCHHH--------------HHHHHHHcCCC
Confidence 2 111 12788887 99999999999
Q ss_pred CCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 317 p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
+++|++|||+. +|+.+|+++||.+|++.+
T Consensus 167 ~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred hhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 99999999998 899999999999999875
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-23 Score=185.74 Aligned_cols=176 Identities=23% Similarity=0.381 Sum_probs=128.0
Q ss_pred EEEeccCccccccccccHHHHHHHHHH-cCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 87 viFDlDGTL~d~~~~~~~~a~~~~~~~-~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
||||+||||+|+... +..++++++.+ +|.+ .++.+.+....+. ....+ .+.++.+. .. .+.
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~----~~~~~~~~----~~----~~~ 62 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDG--PAPFEEYRRHLGR---YFPDI----MRIMGLPL----EM----EEP 62 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCC--CCCHHHHHHHhCc---cHHHH----HHHcCCCH----HH----HHH
Confidence 689999999999987 78999999988 4775 2444444444332 12222 23344321 00 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f 245 (346)
. ....+ . . ....+++||+.++|++|+++|++++|+|| +....++.+++.+|+..+|+..+ +.++
T Consensus 63 ~---~~~~~-~-~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~~l~~~f~~i~-~~~~------ 126 (205)
T TIGR01454 63 F---VRESY-R-L-AGEVEVFPGVPELLAELRADGVGTAIATG---KSGPRARSLLEALGLLPLFDHVI-GSDE------ 126 (205)
T ss_pred H---HHHHH-H-h-hcccccCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHcCChhheeeEE-ecCc------
Confidence 1 11111 1 1 23577999999999999999999999999 66788999999999998887643 2211
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
+ ...||+|++ |+.+++++|+++++|+||||
T Consensus 127 --------~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD 156 (205)
T TIGR01454 127 --------V----------------------------PRPKPAPDI--------------VREALRLLDVPPEDAVMVGD 156 (205)
T ss_pred --------C----------------------------CCCCCChHH--------------HHHHHHHcCCChhheEEEcC
Confidence 1 112777777 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEecCC
Q 019086 326 SQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~ 346 (346)
+.+|+.+|+++||++|++.++
T Consensus 157 ~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 157 AVTDLASARAAGTATVAALWG 177 (205)
T ss_pred CHHHHHHHHHcCCeEEEEEec
Confidence 999999999999999998764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-23 Score=194.59 Aligned_cols=185 Identities=17% Similarity=0.231 Sum_probs=135.8
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChh
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNE 158 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~ 158 (346)
..+.++++|+|||||||+|+... +..+|+++++++|++ .++.+.+..+.+. ... .+...++.+ ..+
T Consensus 57 ~~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~--~~~~~~~~~~~g~---~~~----~i~~~~~~~----~~~ 122 (273)
T PRK13225 57 SYPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYD--PIDERDYAQLRQW---SSR----TIVRRAGLS----PWQ 122 (273)
T ss_pred hhhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCc---cHH----HHHHHcCCC----HHH
Confidence 34456899999999999999986 778999999999987 3555555555432 122 223334432 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh
Q 019086 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (346)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (346)
.+++.+.+...+.... ...+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+..+ +.+
T Consensus 123 ----~~~~~~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn---~~~~~~~~~L~~~gl~~~F~~vi-~~~ 192 (273)
T PRK13225 123 ----QARLLQRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSS---NSRQNIEAFLQRQGLRSLFSVVQ-AGT 192 (273)
T ss_pred ----HHHHHHHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhheEEEE-ecC
Confidence 2233333444443332 3467899999999999999999999999 67899999999999999887642 221
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
+. ++.+. +|..++++++++|+
T Consensus 193 ~~---------------------------------------------~~k~~--------------~~~~~l~~~~~~p~ 213 (273)
T PRK13225 193 PI---------------------------------------------LSKRR--------------ALSQLVAREGWQPA 213 (273)
T ss_pred CC---------------------------------------------CCCHH--------------HHHHHHHHhCcChh
Confidence 10 11112 28999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|++|||+.+|+.+|+++||.+|+|.++
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g 241 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWG 241 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 9999999999999999999999998763
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-23 Score=192.35 Aligned_cols=190 Identities=17% Similarity=0.195 Sum_probs=134.0
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|||||||||+|+... +..++..+++++|.+. .+.+.+..+.+. ....+...+.........++. ...
T Consensus 13 ~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~---~~~~~~~~~l~~~~~~~~~~~----~~~ 82 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVGN---GAPVLVRRALAGSIDHDGVDD----ELA 82 (272)
T ss_pred CCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCh---hHHHHHHHHhcccccccCCCH----HHH
Confidence 579999999999999987 7899999999999872 333333333321 222222222211100111111 123
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
+.+...+.+.|.... ....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.. ++.
T Consensus 83 ~~~~~~~~~~~~~~~--~~~~~~~g~~e~L~~Lk~~g~~l~ivTn---~~~~~~~~~l~~~~i~~~f~~i-~~~------ 150 (272)
T PRK13223 83 EQALALFMEAYADSH--ELTVVYPGVRDTLKWLKKQGVEMALITN---KPERFVAPLLDQMKIGRYFRWI-IGG------ 150 (272)
T ss_pred HHHHHHHHHHHHhcC--cCCccCCCHHHHHHHHHHCCCeEEEEEC---CcHHHHHHHHHHcCcHhhCeEE-Eec------
Confidence 334444444443321 2356899999999999999999999999 6678888999999998877653 222
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
+.+. ..||+|++ |+.+++++|+++++|++|
T Consensus 151 --------d~~~----------------------------~~Kp~p~~--------------~~~~~~~~g~~~~~~l~I 180 (272)
T PRK13223 151 --------DTLP----------------------------QKKPDPAA--------------LLFVMKMAGVPPSQSLFV 180 (272)
T ss_pred --------CCCC----------------------------CCCCCcHH--------------HHHHHHHhCCChhHEEEE
Confidence 2111 12777777 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||+.+||++|+++||.+++|.+
T Consensus 181 GD~~~Di~aA~~aGi~~i~v~~ 202 (272)
T PRK13223 181 GDSRSDVLAAKAAGVQCVALSY 202 (272)
T ss_pred CCCHHHHHHHHHCCCeEEEEec
Confidence 9999999999999999999875
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-23 Score=186.63 Aligned_cols=103 Identities=17% Similarity=0.266 Sum_probs=89.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+..+.+. ++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~gl~~~fd~i~~s~-~~---------------------- 144 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSN---GSPAMLKSLVKHAGLDDPFDAVLSAD-AV---------------------- 144 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHCCChhhhheeEehh-hc----------------------
Confidence 56899999999999999999999999 66788999999999998887643332 21
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
...||+|++ |+.+++++|++|++|++|||+..|+.+|+++||++|+
T Consensus 145 --------------------~~~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~ 190 (198)
T TIGR01428 145 --------------------RAYKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAW 190 (198)
T ss_pred --------------------CCCCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEE
Confidence 122888888 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
|..
T Consensus 191 v~r 193 (198)
T TIGR01428 191 VNR 193 (198)
T ss_pred ecC
Confidence 864
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.6e-23 Score=186.87 Aligned_cols=186 Identities=13% Similarity=0.214 Sum_probs=123.9
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH-
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK- 160 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~- 160 (346)
|.+|+|+||+||||+|... ..++.++++.+|++ ++...+..+... + . .+...+ .... +...+..
T Consensus 1 m~~k~iiFDlDGTLid~~~---~~~~~~~~~~~g~~---~~~~~~~~~~~~--~-~-~~~~~~-~~~~----~~~~~~~~ 65 (224)
T PRK09449 1 MKYDWILFDADETLFHFDA---FAGLQRMFSRYGVD---FTAEDFQDYQAV--N-K-PLWVDY-QNGA----ITALQLQH 65 (224)
T ss_pred CCccEEEEcCCCchhcchh---hHHHHHHHHHhCCC---CcHHHHHHHHHH--H-H-HHHHHH-HcCC----CCHHHHHH
Confidence 4689999999999998543 47888999999986 344433332111 0 0 111011 0000 0000000
Q ss_pred HHHHHHH-------HHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhe
Q 019086 161 AFVKNVL-------QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (346)
Q Consensus 161 ~~~~~l~-------~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (346)
...+.+. ......|.+.. ....+++||+.++|+.|+ +|++++|+|| +....++..++.+|+..+|+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v 140 (224)
T PRK09449 66 TRFESWAEKLNVTPGELNSAFLNAM-AEICTPLPGAVELLNALR-GKVKMGIITN---GFTELQQVRLERTGLRDYFDLL 140 (224)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH-hhcCccCccHHHHHHHHH-hCCeEEEEeC---CcHHHHHHHHHhCChHHHcCEE
Confidence 0000000 11223333333 223669999999999999 6899999999 6678888999999999988775
Q ss_pred ecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc
Q 019086 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (346)
Q Consensus 234 i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l 313 (346)
+.+.+ + ...||+|++ |+.+++++
T Consensus 141 ~~~~~---------------~----------------------------~~~KP~p~~--------------~~~~~~~~ 163 (224)
T PRK09449 141 VISEQ---------------V----------------------------GVAKPDVAI--------------FDYALEQM 163 (224)
T ss_pred EEECc---------------c----------------------------CCCCCCHHH--------------HHHHHHHc
Confidence 43331 1 112888888 99999999
Q ss_pred CCC-CCcEEEEcCCh-hhHHHHHHcCCCEEEec
Q 019086 314 EKP-VRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 314 gv~-p~e~i~VGDs~-~Di~aA~~aG~~~i~v~ 344 (346)
|+. +++|+||||+. +||.+|+++||.+|++.
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence 985 58999999998 79999999999999986
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=184.64 Aligned_cols=183 Identities=15% Similarity=0.237 Sum_probs=127.9
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhc--------cCC--hHHH----HHHHHHHhC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGD--EDRM----LVLFFNRIG 149 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~--------~g~--~~~~----~~~~~~~~g 149 (346)
+|+|+||+||||+|+... +..++.++++++|++ .+........... .+. .... ...+..+++
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIP---LTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCC---ccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 479999999999999986 667889999999986 3322222211110 000 0000 011122222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
.+. . .+...+.|.... ....+++||+.++|+.|+++ ++++|+|| +....++..++.+|+..+
T Consensus 77 ~~~--~-----------~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn---~~~~~~~~~l~~~~l~~~ 138 (224)
T TIGR02254 77 TEA--D-----------EALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTN---GVRETQYKRLRKSGLFPF 138 (224)
T ss_pred CCC--c-----------HHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeC---CchHHHHHHHHHCCcHhh
Confidence 110 0 001223333333 22357999999999999999 99999999 667888999999999998
Q ss_pred hhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHH
Q 019086 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (346)
Q Consensus 230 f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~ 309 (346)
|+..+.+.+. ...||+|++ |+.+
T Consensus 139 fd~i~~~~~~-------------------------------------------~~~KP~~~~--------------~~~~ 161 (224)
T TIGR02254 139 FDDIFVSEDA-------------------------------------------GIQKPDKEI--------------FNYA 161 (224)
T ss_pred cCEEEEcCcc-------------------------------------------CCCCCCHHH--------------HHHH
Confidence 8875433321 123888888 9999
Q ss_pred HHHc-CCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 310 AEYA-EKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~l-gv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
++++ |++|++|+||||+. +|+.+|+++||++|++.+
T Consensus 162 ~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 162 LERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 9999 99999999999998 799999999999999865
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-23 Score=176.65 Aligned_cols=175 Identities=22% Similarity=0.370 Sum_probs=126.2
Q ss_pred EEEeccCccccccccccHHHHHH-HHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 87 viFDlDGTL~d~~~~~~~~a~~~-~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
|+||+||||+++... +.+++.+ +++.++.+ ++.+.+.... ......+...+..+.+..
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELF---GKSYEEALERLLERFGID-------------- 59 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHT---TSHHHHHHHHHHHHHHHH--------------
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHh---CCCHHHHHHHhhhccchh--------------
Confidence 799999999998874 6677776 47778776 2222222222 112333333344333211
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f 245 (346)
.....+.+.+.......+++||+.++|+.|+++|++++++|| +....++..++.+|+.++|+..+.+. +.
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn---~~~~~~~~~l~~~~~~~~f~~i~~~~-~~----- 129 (176)
T PF13419_consen 60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSN---GSRERIERVLERLGLDDYFDEIISSD-DV----- 129 (176)
T ss_dssp -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEES---SEHHHHHHHHHHTTHGGGCSEEEEGG-GS-----
T ss_pred -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeec---CCcccccccccccccccccccccccc-hh-----
Confidence 122233333332224577999999999999999999999999 77888999999999999888654333 11
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
...||+|.+ |+.+++++|++|++|+||||
T Consensus 130 -------------------------------------~~~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD 158 (176)
T PF13419_consen 130 -------------------------------------GSRKPDPDA--------------YRRALEKLGIPPEEILFVGD 158 (176)
T ss_dssp -------------------------------------SSSTTSHHH--------------HHHHHHHHTSSGGGEEEEES
T ss_pred -------------------------------------hhhhhHHHH--------------HHHHHHHcCCCcceEEEEeC
Confidence 112777777 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEe
Q 019086 326 SQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 326 s~~Di~aA~~aG~~~i~v 343 (346)
+..|+.+|+++||.+|+|
T Consensus 159 ~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 159 SPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHcCCeEEeC
Confidence 999999999999999986
|
... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=186.22 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=89.1
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
....++||+.++|+.|+++|++++|+|| +....++..++.+|+.++|+..+.+. + +.
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~iv~s~-~--------------~~----- 146 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTN---AHPHNLAVKLEHTGLDAHLDLLLSTH-T--------------FG----- 146 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeC---cCHHHHHHHHHHCCcHHHCCEEEEee-e--------------CC-----
Confidence 3467999999999999999999999999 66788899999999999887654332 1 11
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
..||+|++ |+.+++++|++|++|+||||+..|+++|+++||.+
T Consensus 147 -----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 147 -----------------------YPKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred -----------------------CCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 12888888 99999999999999999999999999999999985
Q ss_pred -EEecC
Q 019086 341 -VVMRS 345 (346)
Q Consensus 341 -i~v~~ 345 (346)
+.|++
T Consensus 190 ~~~v~~ 195 (224)
T PRK14988 190 CLGVTN 195 (224)
T ss_pred EEEEeC
Confidence 65654
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=212.45 Aligned_cols=190 Identities=20% Similarity=0.261 Sum_probs=138.9
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
-+++++|+|||||||+|+... +..+|.++++++|++ ++.+.+....+ .....++..+...++.+.. .. .
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G---~~~~~~~~~~~~~~~l~~~-~~---~ 140 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMG---TGEANFLGGVASVKGVKGF-DP---D 140 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---CCHHHHHHHHHHhcCCCCC-CH---H
Confidence 357899999999999999987 789999999999997 55555544443 2334444444444444311 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc-cchhheecchh
Q 019086 161 AFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNE 238 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~~ 238 (346)
...+.+.+.|.+.... ....++||+.++|++|+++|++++|+|| +....++..++++|+. .+|+..+.+
T Consensus 141 ----~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn---~~~~~~~~~L~~~gl~~~~Fd~iv~~-- 211 (1057)
T PLN02919 141 ----AAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASS---ADRIKVDANLAAAGLPLSMFDAIVSA-- 211 (1057)
T ss_pred ----HHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHcCCChhHCCEEEEC--
Confidence 1122222233222211 2234799999999999999999999999 6678889999999996 667654322
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
+.+. ..||+|++ |+.+++++|+.|+
T Consensus 212 -------------~~~~----------------------------~~KP~Pe~--------------~~~a~~~lgv~p~ 236 (1057)
T PLN02919 212 -------------DAFE----------------------------NLKPAPDI--------------FLAAAKILGVPTS 236 (1057)
T ss_pred -------------cccc----------------------------cCCCCHHH--------------HHHHHHHcCcCcc
Confidence 2221 22888888 9999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|||+..|+++|+++||++|+|.+
T Consensus 237 e~v~IgDs~~Di~AA~~aGm~~I~v~~ 263 (1057)
T PLN02919 237 ECVVIEDALAGVQAARAAGMRCIAVTT 263 (1057)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999976
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=197.92 Aligned_cols=185 Identities=11% Similarity=0.128 Sum_probs=128.7
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCC--CCC-ChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC--ANW-TAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~--~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
+++|||||||||+|+... +..+|++++++++... ..+ +.+.+....+ .....+...+....+.+
T Consensus 241 ~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G---~~~~~~~~~l~~~~~~~--------- 307 (459)
T PRK06698 241 LQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIMG---VPLPKVWEALLPDHSLE--------- 307 (459)
T ss_pred hhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHcC---CChHHHHHHHhhhcchh---------
Confidence 689999999999999997 7899999999985210 011 2233333332 22333333333322211
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
..+.....+.+.+...+.....+++||+.++|++|+++|++++|+|| +....++.+++++|+..+|+..+ +.+++
T Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~f~~i~-~~d~v 382 (459)
T PRK06698 308 -IREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQWVTETF-SIEQI 382 (459)
T ss_pred -HHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhhcceeE-ecCCC
Confidence 11222233333443333334567999999999999999999999999 77899999999999999887743 32221
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
. .||.|++ |..++++++ |++|
T Consensus 383 ~-------------------------------------------~~~kP~~--------------~~~al~~l~--~~~~ 403 (459)
T PRK06698 383 N-------------------------------------------SLNKSDL--------------VKSILNKYD--IKEA 403 (459)
T ss_pred C-------------------------------------------CCCCcHH--------------HHHHHHhcC--cceE
Confidence 0 0344455 888888865 6899
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|||+.+|+.+|+++||.+|++.+
T Consensus 404 v~VGDs~~Di~aAk~AG~~~I~v~~ 428 (459)
T PRK06698 404 AVVGDRLSDINAAKDNGLIAIGCNF 428 (459)
T ss_pred EEEeCCHHHHHHHHHCCCeEEEEeC
Confidence 9999999999999999999999875
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=179.10 Aligned_cols=193 Identities=15% Similarity=0.197 Sum_probs=136.7
Q ss_pred CCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHh--------------hccC--ChHHHHH-
Q 019086 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------------KSAG--DEDRMLV- 142 (346)
Q Consensus 80 ~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~--------------~~~g--~~~~~~~- 142 (346)
..+++|+|+||++|||+..... ....|.++.+++|+++. .......+. ...| ....++.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYD---DSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCC---HHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 4578899999999999985543 56899999999999842 222222221 1112 2333433
Q ss_pred HHHHHhCCCCCCCChhHHHHHHHHHHH-HHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHH
Q 019086 143 LFFNRIGWPTSVPTNEKKAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (346)
Q Consensus 143 ~~~~~~g~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l 221 (346)
.+...++.... .. .+...+. ....|..+. ...+...+++.++++.||++|..++++||+ +...+.++
T Consensus 79 lv~~~f~~~~~-~~------~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~----d~r~~~~l 146 (237)
T KOG3085|consen 79 LVESTFGKAGI-DY------EEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNF----DDRLRLLL 146 (237)
T ss_pred HHHHHhccccc-hh------HHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCC----cHHHHHHh
Confidence 22222222111 00 0011110 111222221 236778899999999999999999999995 45566999
Q ss_pred HHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHH
Q 019086 222 EKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301 (346)
Q Consensus 222 ~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~ 301 (346)
..+|+..+||+.+.|++.+.+ ||+|.|
T Consensus 147 ~~~~l~~~fD~vv~S~e~g~~-------------------------------------------KPDp~I---------- 173 (237)
T KOG3085|consen 147 LPLGLSAYFDFVVESCEVGLE-------------------------------------------KPDPRI---------- 173 (237)
T ss_pred hccCHHHhhhhhhhhhhhccC-------------------------------------------CCChHH----------
Confidence 999999999999988866544 999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 302 IVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 302 ~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+++++|+.|++|+||||.. ||+++|+++||.+++|-+
T Consensus 174 ----f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 174 ----FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred ----HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 9999999999999999999997 899999999999999865
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=176.73 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhH--HHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRI--ARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~--~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
...+++||+.++|+.|+++|++++|+||. .... ....+..+++..+|+..+.+.+.
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~---~~~~~~~~~~~~~~~l~~~fd~v~~s~~~------------------- 148 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNN---FPTDHSAEEALLPGDIMALFDAVVESCLE------------------- 148 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCC---CCccchhhhHhhhhhhHhhCCEEEEeeec-------------------
Confidence 35678999999999999999999999994 3222 22233446777777765433211
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
+..||+|++ |+.+++++|++|++|+||||+..||.+|+++||
T Consensus 149 ------------------------~~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 149 ------------------------GLRKPDPRI--------------YQLMLERLGVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 123888888 999999999999999999999999999999999
Q ss_pred CEEEecC
Q 019086 339 PCVVMRS 345 (346)
Q Consensus 339 ~~i~v~~ 345 (346)
.+|++.+
T Consensus 191 ~~i~v~~ 197 (211)
T TIGR02247 191 TTIKVSD 197 (211)
T ss_pred EEEEECC
Confidence 9999864
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=169.92 Aligned_cols=100 Identities=23% Similarity=0.329 Sum_probs=84.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +.... ..++.++|+..+|+..+.+. .+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn---~~~~~-~~~~~~~~l~~~f~~i~~~~---------------~~~------- 137 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTN---SPRDH-AVLVQELGLRDLFDVVIFSG---------------DVG------- 137 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeC---CchHH-HHHHHhcCCHHHCCEEEEcC---------------CCC-------
Confidence 67999999999999999999999999 55555 56666699998887754432 111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|++ |+.+++++|++|++|++|||+..|+.+|+++||.+|+
T Consensus 138 ---------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 138 ---------------------RGKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 12788887 9999999999999999999999999999999999997
Q ss_pred e
Q 019086 343 M 343 (346)
Q Consensus 343 v 343 (346)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
|
HAD subfamilies caused by an overly broad single model. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-21 Score=176.50 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=119.9
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCC---CCCCChHHHHHHHhhccCC-----------hHHHHHHHHHHh
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLRKSAGD-----------EDRMLVLFFNRI 148 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~---~~~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~ 148 (346)
++|+|+||+||||+|+... +..+++++++.++.. ...|....+..+....... .......++.++
T Consensus 9 ~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 4789999999999999886 667777777655211 1123333333322211000 011122344455
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 149 GWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 149 g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
|.+. ++. +.........+.... ....++||+.++|+.|+++ ++++|+||. ... ++.+|+.+
T Consensus 88 g~~~----~~~----~~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~---~~~-----~~~~gl~~ 148 (238)
T PRK10748 88 GLSA----EEA----SAGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNG---NAQ-----PELFGLGD 148 (238)
T ss_pred CCCH----HHH----HHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECC---Cch-----HHHCCcHH
Confidence 5431 110 011111112222221 2367899999999999986 999999993 333 47789999
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (346)
+|+..+.+. +. ...||+|++ |+.
T Consensus 149 ~fd~i~~~~-~~------------------------------------------~~~KP~p~~--------------~~~ 171 (238)
T PRK10748 149 YFEFVLRAG-PH------------------------------------------GRSKPFSDM--------------YHL 171 (238)
T ss_pred hhceeEecc-cC------------------------------------------CcCCCcHHH--------------HHH
Confidence 888754332 11 112888888 999
Q ss_pred HHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecC
Q 019086 309 GAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 309 ~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~ 345 (346)
+++++|++|++|+||||+ ..||.+|+++||.+|++..
T Consensus 172 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 209 (238)
T PRK10748 172 AAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINP 209 (238)
T ss_pred HHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence 999999999999999999 5999999999999999864
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=169.49 Aligned_cols=183 Identities=11% Similarity=0.047 Sum_probs=122.7
Q ss_pred eEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCC------hHHHHHHHHHHhCCCCCCCChh
Q 019086 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD------EDRMLVLFFNRIGWPTSVPTNE 158 (346)
Q Consensus 85 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~g~~~~~~~~~ 158 (346)
++||||+||||+|+... +..+++++++++|.. ..+.+.+..+.+..... ...+...+....... ......
T Consensus 1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 76 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSER-VRDAPT 76 (197)
T ss_pred CceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchh-ccCCcc
Confidence 37999999999999986 889999999999854 36666666665432110 011212111111000 000011
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--------cCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 159 KKAFVKNVLQEKKNALDEFLA--------SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
.+.+...+.+.|..... .....+.+++.++|+.|+++|++++|+|| +....++.+++.+|+..+|
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f 149 (197)
T TIGR01548 77 ----LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEILF 149 (197)
T ss_pred ----HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhhC
Confidence 12333333333332110 01234567779999999999999999999 6789999999999999988
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+..+.+. +. .. ||+|.+ |..++
T Consensus 150 ~~~~~~~-~~------------------------------------------~~-KP~p~~--------------~~~~~ 171 (197)
T TIGR01548 150 PVQIWME-DC------------------------------------------PP-KPNPEP--------------LILAA 171 (197)
T ss_pred CEEEeec-CC------------------------------------------CC-CcCHHH--------------HHHHH
Confidence 7643222 11 11 677777 99999
Q ss_pred HHcCCCCCcEEEEcCChhhHHHHHHc
Q 019086 311 EYAEKPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 311 e~lgv~p~e~i~VGDs~~Di~aA~~a 336 (346)
+++|+++++|++|||+.+||.+|+++
T Consensus 172 ~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 172 KALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-20 Score=169.03 Aligned_cols=188 Identities=22% Similarity=0.347 Sum_probs=139.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
..+.+++||+||||+|++.. +.++|...+.++|.+ ++........ +....++.+.+...+..+-+
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~m---G~~~~eaa~~~~~~~~dp~s-------- 72 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSM---GKRTSEAARLFVKKLPDPVS-------- 72 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHc---CCCHHHHHHHHHhhcCCCCC--------
Confidence 34569999999999999997 889999999999986 5544444433 33566677777655544432
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC-cccchhheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~e~ 240 (346)
.++...+..+.+.+++ ....+.||+.++++.|+.+|++++++|+ ..+...+....+++ +...|...+.+.
T Consensus 73 -~ee~~~e~~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~---s~~~~~~~k~~~~~~~~~~f~~~v~~d--- 143 (222)
T KOG2914|consen 73 -REEFNKEEEEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATS---STSASFELKISRHEDIFKNFSHVVLGD--- 143 (222)
T ss_pred -HHHHHHHHHHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEec---CCcccHHHHHHHhhHHHHhcCCCeecC---
Confidence 2344455555555554 2356899999999999999999999999 44566666666555 444444333321
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC-Cc
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RN 319 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p-~e 319 (346)
+..|..| ||+|+| |..+++++|..+ +.
T Consensus 144 ----------~~~v~~g----------------------------KP~Pdi--------------~l~A~~~l~~~~~~k 171 (222)
T KOG2914|consen 144 ----------DPEVKNG----------------------------KPDPDI--------------YLKAAKRLGVPPPSK 171 (222)
T ss_pred ----------CccccCC----------------------------CCCchH--------------HHHHHHhcCCCCccc
Confidence 2333333 888888 999999999998 99
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++++|+..++++|++|||++|+|++
T Consensus 172 ~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 172 CLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred eEEECCCHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999999999976
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=170.68 Aligned_cols=181 Identities=19% Similarity=0.303 Sum_probs=123.3
Q ss_pred ccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHH
Q 019086 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEK 170 (346)
Q Consensus 91 lDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 170 (346)
|||||+|+... +..+|.++++++|++ ++.+.+....+ .....++..+...++.+.....+ .+....
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 66 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMMG---KKAIEAARIFVEESGLSDSLSPE-------DFLVER 66 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHccC---CCHHHHHHHHHHHhCCCCCCCHH-------HHHHHH
Confidence 79999999987 889999999999996 44443333332 23344555666666654322111 112222
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHH-HHHHHhCcccchhheecchhhHHHhhhhccc
Q 019086 171 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR-SVVEKLGSERISKIKIVGNEEVERSLYGQFV 249 (346)
Q Consensus 171 ~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~-~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~ 249 (346)
...+.... ...+++||+.++|+.|+++|++++|+||. ...... ......++.++|+..+ +.++.
T Consensus 67 ~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~---~~~~~~~~~~~~~~l~~~f~~i~-~~~~~--------- 131 (220)
T PLN02811 67 EAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGS---HKRHFDLKTQRHGELFSLMHHVV-TGDDP--------- 131 (220)
T ss_pred HHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHcccHHHHhhCCEEE-ECChh---------
Confidence 22222222 23568999999999999999999999994 333332 2333346666665532 22100
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC---CCCCcEEEEcCC
Q 019086 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGS 326 (346)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg---v~p~e~i~VGDs 326 (346)
.+. ..||+|++ |..+++++| ++|++|+||||+
T Consensus 132 ---~~~----------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgDs 166 (220)
T PLN02811 132 ---EVK----------------------------QGKPAPDI--------------FLAAARRFEDGPVDPGKVLVFEDA 166 (220)
T ss_pred ---hcc----------------------------CCCCCcHH--------------HHHHHHHhCCCCCCccceEEEecc
Confidence 121 12888888 999999997 999999999999
Q ss_pred hhhHHHHHHcCCCEEEecC
Q 019086 327 QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~ 345 (346)
..|+++|+++||++|+|++
T Consensus 167 ~~di~aA~~aG~~~i~v~~ 185 (220)
T PLN02811 167 PSGVEAAKNAGMSVVMVPD 185 (220)
T ss_pred HhhHHHHHHCCCeEEEEeC
Confidence 9999999999999999975
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.6e-21 Score=170.16 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=82.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
+++||+.++|+.|+++|++++|+|| +........+.. .++..+|+..+.+. .+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn---~~~~~~~~~~~~~~~l~~~fd~v~~s~---------------~~~------- 138 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSN---TNRLHTTFWPEEYPEVRAAADHIYLSQ---------------DLG------- 138 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcC---CchhhHHHHHhhchhHHHhcCEEEEec---------------ccC-------
Confidence 4899999999999999999999999 444544444433 36666666543332 221
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||.+|+
T Consensus 139 ---------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 139 ---------------------MRKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 23888888 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
+.+
T Consensus 184 ~~~ 186 (199)
T PRK09456 184 VTD 186 (199)
T ss_pred ecC
Confidence 875
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-21 Score=169.66 Aligned_cols=177 Identities=15% Similarity=0.105 Sum_probs=115.0
Q ss_pred EEEEeccCccccccccccHHHHHHHHH-----HcCCCCCCCChH-HHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~-----~~gi~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
+|+||+||||+|+... +..++++++. ++|++. .+.. ....++... |.... ......+ .+.
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~-g~~~~---~~~~~~~----~~~--- 67 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREY-GTTLA---GLMILHE----IDA--- 67 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHH-chHHH---HHHHhhC----CCH---
Confidence 7999999999999765 5677776654 567752 1111 111111111 11111 1111111 110
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhh
Q 019086 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (346)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e 239 (346)
+.+.+.+.+.......+++||+.++|+.|+ .+++|+|| +....+...++.+|+..+|+..+.+. +
T Consensus 68 --------~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn---~~~~~~~~~l~~~gl~~~fd~i~~~~-~ 132 (184)
T TIGR01993 68 --------DEYLRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTN---GDRAHARRALNRLGIEDCFDGIFCFD-T 132 (184)
T ss_pred --------HHHHHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeC---CCHHHHHHHHHHcCcHhhhCeEEEee-c
Confidence 112222222111123568999999999998 48999999 66788999999999998887643332 1
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
. ... ....||+|++ |+.+++++|++|++
T Consensus 133 ~--------------~~~------------------------~~~~KP~p~~--------------~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 133 A--------------NPD------------------------YLLPKPSPQA--------------YEKALREAGVDPER 160 (184)
T ss_pred c--------------cCc------------------------cCCCCCCHHH--------------HHHHHHHhCCCccc
Confidence 1 100 0012777777 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEe
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
|+||||+..|+.+|+++||++|+|
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999986
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-20 Score=170.80 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=91.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..+++|++.++|++++.+ ++++|+|| +........+..+|+.++|+..+++.+-+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTN---g~~~~~~~~l~~~gl~~~Fd~v~~s~~~g--------------------- 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTN---GARPHQERKLRQLGLLDYFDAVFISEDVG--------------------- 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeC---CChHHHHHHHHHcCChhhhheEEEecccc---------------------
Confidence 467999999999999999 99999999 67788999999999999999877665332
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~ 340 (346)
..||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||.+
T Consensus 152 ----------------------~~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 152 ----------------------VAKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred ----------------------cCCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 22888888 9999999999999999999997 7889999999999
Q ss_pred EEecC
Q 019086 341 VVMRS 345 (346)
Q Consensus 341 i~v~~ 345 (346)
|++..
T Consensus 196 vwi~~ 200 (229)
T COG1011 196 VWINR 200 (229)
T ss_pred EEECC
Confidence 99864
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-19 Score=159.07 Aligned_cols=173 Identities=13% Similarity=0.144 Sum_probs=110.1
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|||||||||+|+. .++.++++++|++. +.+...++ +..... +...++. ..++ .
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~-----~~~~~~~g---~~~~~~---~~~~~~~----~~~~----~ 57 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT-----DHILKMIQ---DERFRD---PGELFGC----DQEL----A 57 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH-----HHHHHHHh---HhhhcC---HHHHhcc----cHHH----H
Confidence 6899999999999944 45678888899862 22222221 111111 1122221 1011 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
.++...+.. ... .....++||+.++|++|++++ +++++|| .........+..+++..+|..
T Consensus 58 ~~~~~~~~~---~~~-~~~~~~~pG~~e~L~~L~~~~-~~~i~Tn---~~~~~~~~~~~~~~l~~~f~~----------- 118 (197)
T PHA02597 58 KKLIEKYNN---SDF-IRYLSAYDDALDVINKLKEDY-DFVAVTA---LGDSIDALLNRQFNLNALFPG----------- 118 (197)
T ss_pred HHHhhhhhH---HHH-HHhccCCCCHHHHHHHHHhcC-CEEEEeC---CccchhHHHHhhCCHHHhCCC-----------
Confidence 122222221 111 223568999999999999974 7888898 444555557778888766532
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
+|+.++.++. .||+|++ |+.+++++| |++|+||
T Consensus 119 ~f~~i~~~~~-------------------------------~~~kp~~--------------~~~a~~~~~--~~~~v~v 151 (197)
T PHA02597 119 AFSEVLMCGH-------------------------------DESKEKL--------------FIKAKEKYG--DRVVCFV 151 (197)
T ss_pred cccEEEEecc-------------------------------CcccHHH--------------HHHHHHHhC--CCcEEEe
Confidence 1222222221 1455555 999999999 8999999
Q ss_pred cCChhhHHHHHHc--CCCEEEecCC
Q 019086 324 AGSQSGVAGAQRI--GMPCVVMRSR 346 (346)
Q Consensus 324 GDs~~Di~aA~~a--G~~~i~v~~~ 346 (346)
||+..|+.+|+++ ||++|++.++
T Consensus 152 gDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred CCCHHHHHHHHHHHcCCcEEEecch
Confidence 9999999999999 9999999763
|
2 hypothetical protein; Provisional |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-19 Score=163.06 Aligned_cols=183 Identities=15% Similarity=0.190 Sum_probs=114.2
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.+.+++++||+||||+++.. +.+++..+|.+. ....+.....+....+...+..++..-....
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----- 73 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE------EVSEITERAMRGELDFKASLRERVALLKGLP----- 73 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH------HHHHHHHHHHcCCCCHHHHHHHHHHHhCCCC-----
Confidence 34578999999999999753 356677777751 1111111111111111112222211100110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
.+.+.... ...+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.
T Consensus 74 ----------~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~- 137 (219)
T TIGR00338 74 ----------VELLKEVR--ENLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDG- 137 (219)
T ss_pred ----------HHHHHHHH--hcCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECC-
Confidence 11112222 2256899999999999999999999999 7789999999999999877554322210
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
.+...+.+... ..+|.|.+ |+.+++++++++++|
T Consensus 138 ---~~~~~~~~~~~-----------------------------~~~~k~~~--------------~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ---KLTGLVEGPIV-----------------------------DASYKGKT--------------LLILLRKEGISPENT 171 (219)
T ss_pred ---EEEEEecCccc-----------------------------CCcccHHH--------------HHHHHHHcCCCHHHE
Confidence 01111111100 00233333 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEE
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++|||+.+|+.+|+.+|+..++
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEe
Confidence 9999999999999999998754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.2e-19 Score=151.37 Aligned_cols=154 Identities=19% Similarity=0.294 Sum_probs=107.3
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
+|+||+||||+|+... ...+|+++++++|.+. +.+....+. ....+ ..+... .++
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~g~---~~~~~-~~~~~~---------------~~~ 55 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGEDF-----QALKALRGL---AEELL-YRIATS---------------FEE 55 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhcccH-----HHHHHHHcc---ChHHH-HHHHHH---------------HHH
Confidence 4899999999999765 7799999999988641 222222211 11111 111000 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f 245 (346)
+..+ ......+||+.++|+.|+++|++++|+|| +....+...++.+ +..+|+..+.+.
T Consensus 56 --------~~~~--~~~~~~~~g~~e~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~-l~~~f~~i~~~~-------- 113 (154)
T TIGR01549 56 --------LLGY--DAEEAYIRGAADLLKRLKEAGIKLGIISN---GSLRAQKLLLRKH-LGDYFDLILGSD-------- 113 (154)
T ss_pred --------HhCc--chhheeccCHHHHHHHHHHCcCeEEEEeC---CchHHHHHHHHHH-HHhcCcEEEecC--------
Confidence 1111 12344679999999999999999999999 6678888888887 777665532211
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
.+ . .||+|++ |..+++++|+++ +|++|||
T Consensus 114 -------~~----------------------------~-~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGD 142 (154)
T TIGR01549 114 -------EF----------------------------G-AKPEPEI--------------FLAALESLGLPP-EVLHVGD 142 (154)
T ss_pred -------CC----------------------------C-CCcCHHH--------------HHHHHHHcCCCC-CEEEEeC
Confidence 11 1 2777777 999999999999 9999999
Q ss_pred ChhhHHHHHHcC
Q 019086 326 SQSGVAGAQRIG 337 (346)
Q Consensus 326 s~~Di~aA~~aG 337 (346)
+..|+.+|+++|
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999999998
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-18 Score=152.74 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=85.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g---------------------- 133 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG---------------------- 133 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC----------------------
Confidence 46999999999999999999999999 77899999999999988765544332111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||++.+. ..+.+++.+ ++.+++++|+++++|++|||+.+|+.+|+.+|+.+++
T Consensus 134 ---------------------~~~p~~~~~-~~~~~k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~ 188 (201)
T TIGR01491 134 ---------------------FIQPDGIVR-VTFDNKGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISL 188 (201)
T ss_pred ---------------------eEecceeeE-EccccHHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEE
Confidence 013332210 011222233 8888899999999999999999999999999999887
Q ss_pred ec
Q 019086 343 MR 344 (346)
Q Consensus 343 v~ 344 (346)
.+
T Consensus 189 ~~ 190 (201)
T TIGR01491 189 GD 190 (201)
T ss_pred CC
Confidence 65
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-19 Score=158.45 Aligned_cols=167 Identities=17% Similarity=0.198 Sum_probs=109.6
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCChH---H----HHHHHHHHhCCCCCCCCh
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDED---R----MLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~~---~----~~~~~~~~~g~~~~~~~~ 157 (346)
+|+||+||||+|++.. +..++.+++.+.+.....|... ..........+... . ....+..++|.+.. .
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~ 76 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE---P 76 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC---H
Confidence 5899999999999975 6677777776654310001111 11111211111111 1 23344555555321 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
. ..+.+.... ...+++||+.++|+ +++|+|| +....+...++++|+..+|+.. ++.
T Consensus 77 -------~----~~~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v-~~~ 132 (175)
T TIGR01493 77 -------K----YGERLRDAY--KNLPPWPDSAAALA-------RVAILSN---ASHWAFDQFAQQAGLPWYFDRA-FSV 132 (175)
T ss_pred -------H----HHHHHHHHH--hcCCCCCchHHHHH-------HHhhhhC---CCHHHHHHHHHHCCCHHHHhhh-ccH
Confidence 1 111222222 13569999999998 4899999 6788899999999999988863 444
Q ss_pred hhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 019086 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (346)
Q Consensus 238 ~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p 317 (346)
+++ ...||+|++ |+.+++++|++|
T Consensus 133 ~~~------------------------------------------~~~KP~p~~--------------f~~~~~~~~~~p 156 (175)
T TIGR01493 133 DTV------------------------------------------RAYKPDPVV--------------YELVFDTVGLPP 156 (175)
T ss_pred hhc------------------------------------------CCCCCCHHH--------------HHHHHHHHCCCH
Confidence 332 122888888 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHc
Q 019086 318 RNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~a 336 (346)
++|+||||+.+||.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999874
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-18 Score=156.47 Aligned_cols=184 Identities=13% Similarity=0.133 Sum_probs=113.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+++|+|+|||||||+++.. +..+++++|.+ ....+....+.+....+.+.+..+++.... .
T Consensus 10 ~~~k~viFDfDGTL~~~~~------~~~~~~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~------ 70 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG------IDELAEFCGAG------EAVAEWTAKAMGGSVPFEEALAARLSLFKP-S------ 70 (224)
T ss_pred ccCCEEEEeCCCcccchHH------HHHHHHHcCCh------HHHHHHHHHHHCCCCCHHHHHHHHHHHcCC-C------
Confidence 4688999999999999754 37788888885 222222222222233343334333322110 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc--cchhheecchhh
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEE 239 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~e 239 (346)
. +...+.+. .....++||+.++|+.|+++|++++|+|+ +.+..++.+++.+|+. .+|...+...++
T Consensus 71 -~----~~~~~~~~----~~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~ 138 (224)
T PLN02954 71 -L----SQVEEFLE----KRPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDS 138 (224)
T ss_pred -H----HHHHHHHH----HccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCC
Confidence 0 11111121 12356899999999999999999999999 7789999999999997 345432211111
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
..+.|.... .|. +..+++|.. ++.+++.+|. ++
T Consensus 139 -------g~~~g~~~~------------------------------~~~-----~~~~~K~~~---i~~~~~~~~~--~~ 171 (224)
T PLN02954 139 -------GEYAGFDEN------------------------------EPT-----SRSGGKAEA---VQHIKKKHGY--KT 171 (224)
T ss_pred -------CcEECccCC------------------------------Ccc-----cCCccHHHH---HHHHHHHcCC--Cc
Confidence 111111000 000 001112222 7888888875 68
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEe
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
|++|||+.+|+.+|+++|+.+++.
T Consensus 172 ~i~iGDs~~Di~aa~~~~~~~~~~ 195 (224)
T PLN02954 172 MVMIGDGATDLEARKPGGADLFIG 195 (224)
T ss_pred eEEEeCCHHHHHhhhcCCCCEEEe
Confidence 999999999999999999887654
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=165.51 Aligned_cols=182 Identities=14% Similarity=0.174 Sum_probs=117.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
..+++|+|||||||+.. ..+.++++..|.. ................+.+.+..++..-...+
T Consensus 108 ~~~~LvvfDmDGTLI~~------e~i~eia~~~g~~------~~v~~it~~~m~Geldf~esl~~rv~~l~g~~------ 169 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI------ECIDEIAKLAGTG------EEVAEVTERAMRGELDFEASLRQRVATLKGAD------ 169 (322)
T ss_pred cCCCEEEEECCCCCcch------HHHHHHHHHhCCc------hHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCC------
Confidence 46789999999999843 4557777788876 22222222222223333333333332111110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
...+.... ..++++||+.++|+.|+++|++++|+|+ ++....+.+++++|++..+...+ +..
T Consensus 170 ---------~~il~~v~--~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~l----ei~ 231 (322)
T PRK11133 170 ---------ANILQQVR--ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANEL----EIM 231 (322)
T ss_pred ---------HHHHHHHH--HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEE----EEE
Confidence 01111111 2367999999999999999999999999 77788899999999987554221 111
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
.+.++..+.|..+ .+ ||.+.+ ++.+++++|+++++|+
T Consensus 232 dg~ltg~v~g~iv-~~----------------------------k~K~~~--------------L~~la~~lgi~~~qtI 268 (322)
T PRK11133 232 DGKLTGNVLGDIV-DA----------------------------QYKADT--------------LTRLAQEYEIPLAQTV 268 (322)
T ss_pred CCEEEeEecCccC-Cc----------------------------ccHHHH--------------HHHHHHHcCCChhhEE
Confidence 1122222333211 11 333333 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEE
Q 019086 322 LIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+|||+.||+.|++.||+..++
T Consensus 269 aVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 269 AIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred EEECCHHHHHHHHHCCCeEEe
Confidence 999999999999999998876
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.7e-17 Score=140.31 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=81.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCc------------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~------------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
+++||+.++|+.|+++|++++|+||..... ...+..+++.+|+...+.+. .. ....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~----------~~~~ 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF--CP----------HHPA 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE--CC----------CCCC
Confidence 378999999999999999999999942100 13566777888886321110 00 0000
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
+.. +.+||+|++ |+.+++++|+++++|+||||+..|++
T Consensus 95 ~~~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~Di~ 132 (147)
T TIGR01656 95 DNC----------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRDLQ 132 (147)
T ss_pred CCC----------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHH
Confidence 000 123788777 99999999999999999999999999
Q ss_pred HHHHcCCCEEEecCC
Q 019086 332 GAQRIGMPCVVMRSR 346 (346)
Q Consensus 332 aA~~aG~~~i~v~~~ 346 (346)
+|+++||.+|+|.++
T Consensus 133 ~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 133 AARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHCCCCEEEecCC
Confidence 999999999999864
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=144.82 Aligned_cols=189 Identities=14% Similarity=0.091 Sum_probs=117.2
Q ss_pred ceEEEEeccCcccccccc---ccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccC-ChHHHHHHHHHHhCCCCCCCChhH
Q 019086 84 DLAVLLEVDGVLVDAYRF---GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~---~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
+++|+||+.||+.+.... -++.+ .+.+.++--. +|..+....+...... ..+.+...+...+..+...+
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~-~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~---- 73 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYA-ASRLESFVND--NYESTIVENLRELGKTPEELILLRKLHAEMDKDRKAT---- 73 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHH-HHHHHHHHHH--hCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcc----
Confidence 468999999999985532 02122 2222221111 2333444443322111 11333333333333222211
Q ss_pred HHHHHHHHHH-HHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh---Ccccchhheec
Q 019086 160 KAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIV 235 (346)
Q Consensus 160 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l---gl~~~f~~~i~ 235 (346)
..+.+... +.+.|... ....+++||+.++|++|+++|++++|+|| +.......++.+. ++.++|+..
T Consensus 74 --~lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn---~s~~~~~~~~~~~~~~~L~~~f~~~-- 144 (220)
T TIGR01691 74 --PLKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSS---GSVPAQKLLFGHSDAGNLTPYFSGY-- 144 (220)
T ss_pred --hHHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHhhccccchhhhcceE--
Confidence 12233332 34444332 23456999999999999999999999999 5567677777765 455555432
Q ss_pred chhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCC
Q 019086 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (346)
Q Consensus 236 ~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv 315 (346)
|+..+ ..||+|++ |..+++++|+
T Consensus 145 ---------fd~~~----------------------------------g~KP~p~~--------------y~~i~~~lgv 167 (220)
T TIGR01691 145 ---------FDTTV----------------------------------GLKTEAQS--------------YVKIAGQLGS 167 (220)
T ss_pred ---------EEeCc----------------------------------ccCCCHHH--------------HHHHHHHhCc
Confidence 21100 01788887 9999999999
Q ss_pred CCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 316 PVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 316 ~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|+||||+..|+.+|+++||.+|++.+
T Consensus 168 ~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r 197 (220)
T TIGR01691 168 PPREILFLSDIINELDAARKAGLHTGQLVR 197 (220)
T ss_pred ChhHEEEEeCCHHHHHHHHHcCCEEEEEEC
Confidence 999999999999999999999999998754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=133.58 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=79.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCc--------hhHHHHHHHHhCcccchhheecchhhHHHhhhhcccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~--------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~ 256 (346)
++||+.++|+.|+++|++++|+|| +. ...+..+++.+|+...+.+ ++. .
T Consensus 26 ~~~~v~~~l~~L~~~g~~l~i~Sn---~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~--~---------------- 82 (132)
T TIGR01662 26 LYPEVPDALAELKEAGYKVVIVTN---QSGIGRGKFSSGRVARRLEELGVPIDVLY--ACP--H---------------- 82 (132)
T ss_pred eCCCHHHHHHHHHHCCCEEEEEEC---CccccccHHHHHHHHHHHHHCCCCEEEEE--ECC--C----------------
Confidence 789999999999999999999999 55 5668888999998633221 111 0
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc-CCCCCcEEEEcC-ChhhHHHHH
Q 019086 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGAQ 334 (346)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l-gv~p~e~i~VGD-s~~Di~aA~ 334 (346)
..||+|++ |+.+++++ +++|++|+|||| +..|+.+|+
T Consensus 83 ---------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~ 121 (132)
T TIGR01662 83 ---------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAAK 121 (132)
T ss_pred ---------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHHH
Confidence 12777777 99999999 599999999999 689999999
Q ss_pred HcCCCEEEec
Q 019086 335 RIGMPCVVMR 344 (346)
Q Consensus 335 ~aG~~~i~v~ 344 (346)
++|+.+|+++
T Consensus 122 ~~Gi~~i~~~ 131 (132)
T TIGR01662 122 RAGLAFILVA 131 (132)
T ss_pred HCCCeEEEee
Confidence 9999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=140.49 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=79.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-----hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-----~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
+++||+.++|++|+++|++++|+||...-. .......++.+|++.++..... .++.+
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--------------~~~~~---- 89 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHK--------------HGDGC---- 89 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCC--------------CCCCC----
Confidence 388999999999999999999999942100 0113334666777654322110 11111
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
..+||+|++ |+.++++++++|++|+||||+..|+.+|+++||
T Consensus 90 ------------------------~~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 90 ------------------------ECRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 123888888 999999999999999999999999999999999
Q ss_pred CEEEecCC
Q 019086 339 PCVVMRSR 346 (346)
Q Consensus 339 ~~i~v~~~ 346 (346)
.+|++.++
T Consensus 132 ~~i~v~~g 139 (173)
T PRK06769 132 TTILVRTG 139 (173)
T ss_pred eEEEEecC
Confidence 99999763
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-17 Score=144.50 Aligned_cols=105 Identities=12% Similarity=0.029 Sum_probs=84.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcc---------cchhheecchhhHHHhhhhccccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~---------~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
..+++||+.++|+.|+++|++++|+|| + ....++.+++.+|+. .+|+..+.+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn---~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~-------------- 105 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASW---NDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY-------------- 105 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeC---CCChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc--------------
Confidence 356899999999999999999999999 5 678889999999997 7666543222
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc--CCCCCcEEEEcCChhh
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSG 329 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l--gv~p~e~i~VGDs~~D 329 (346)
.. ...||.+.+ ++.+.+.+ |++|++|+||||+..|
T Consensus 106 -~~----------------------------~~~kp~~~i--------------~~~~~~~~~~gl~p~e~l~VgDs~~d 142 (174)
T TIGR01685 106 -KP----------------------------NKAKQLEMI--------------LQKVNKVDPSVLKPAQILFFDDRTDN 142 (174)
T ss_pred -CC----------------------------chHHHHHHH--------------HHHhhhcccCCCCHHHeEEEcChhHh
Confidence 11 001444444 77776777 8999999999999999
Q ss_pred HHHHHHcCCCEEEecCC
Q 019086 330 VAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~~ 346 (346)
+.+|+++|+.+++++++
T Consensus 143 i~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 143 VREVWGYGVTSCYCPSG 159 (174)
T ss_pred HHHHHHhCCEEEEcCCC
Confidence 99999999999999764
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-16 Score=138.17 Aligned_cols=108 Identities=15% Similarity=0.071 Sum_probs=77.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCC----c--------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~----~--------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
.++||+.++|++|+++|++++|+||.... . .......++.+|+. |+..+.+.. ...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~----------~~~ 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPH----------HPE 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCC----------CCC
Confidence 48899999999999999999999994210 0 12233445555652 332221110 000
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
+.+ ...||+|.+ |..+++++|+++++|+||||+.+|+.
T Consensus 97 ~~~----------------------------~~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di~ 134 (181)
T PRK08942 97 DGC----------------------------DCRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDLQ 134 (181)
T ss_pred CCC----------------------------cCCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHH
Confidence 111 123888888 99999999999999999999999999
Q ss_pred HHHHcCCCEEEecC
Q 019086 332 GAQRIGMPCVVMRS 345 (346)
Q Consensus 332 aA~~aG~~~i~v~~ 345 (346)
+|+++||.+|++++
T Consensus 135 ~A~~aG~~~i~v~~ 148 (181)
T PRK08942 135 AAAAAGVTPVLVRT 148 (181)
T ss_pred HHHHCCCeEEEEcC
Confidence 99999999999875
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.9e-16 Score=136.79 Aligned_cols=178 Identities=16% Similarity=0.204 Sum_probs=123.3
Q ss_pred CCceEEEEeccCccccccccccHHHHH----HHH-HHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFN----VAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPT 156 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~----~~~-~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~ 156 (346)
+.+++++||+|.||+....- ...+.. +.| .++|++.. ...+....+...+|..
T Consensus 13 ~~~~~l~FDiDdtLYp~St~-i~~~~~~nI~~f~~eklgi~~e----------------~a~~L~~~~yk~YG~t----- 70 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTG-IQLMMRNNIQEFFVEKLGISEE----------------EAEELRESLYKEYGLT----- 70 (244)
T ss_pred ccceEEEEecccccccCchh-HHHHHHHHHHHHHHHHhCCChh----------------hhHHHHHHHHHHHhHH-----
Confidence 37899999999999985542 223333 333 45777631 1122222333444321
Q ss_pred hhHHHHHHHHH--------HHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 157 NEKKAFVKNVL--------QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 157 ~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+..+. .++.+.....+.-+.++|.|-.+++|-.|+.++ .++.|| ++...+..++.+||+++
T Consensus 71 ------~aGL~~~~~~~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieD 139 (244)
T KOG3109|consen 71 ------MAGLKAVGYIFDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIED 139 (244)
T ss_pred ------HHHHHHhcccCCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHH
Confidence 11111 222322333332234778899999999999975 789999 77889999999999999
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcc--ccccCCCCCchhHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL--SVDIDTSSPESLDKIVAAL 306 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP--~p~i~~p~~~~~~~~~~~~ 306 (346)
.|+.++...-. -| .+-++||+++ +|
T Consensus 140 cFegii~~e~~----------------------------------------------np~~~~~vcKP~~~-------af 166 (244)
T KOG3109|consen 140 CFEGIICFETL----------------------------------------------NPIEKTVVCKPSEE-------AF 166 (244)
T ss_pred hccceeEeecc----------------------------------------------CCCCCceeecCCHH-------HH
Confidence 99886533200 23 5566788777 59
Q ss_pred HHHHHHcCCC-CCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 307 RAGAEYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 307 ~~~~e~lgv~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+.+.+..|+. |.+++||+||.++|.+|++.||.++++..
T Consensus 167 E~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 167 EKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred HHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence 9999999998 99999999999999999999999999863
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.9e-16 Score=135.72 Aligned_cols=109 Identities=9% Similarity=0.093 Sum_probs=84.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC------------chhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~------------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
++++||+.++|++|+++|++++|+||...- ....+..+++.+|+. |+..+++.. ..
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~----------~~ 95 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPH----------FP 95 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCC----------CC
Confidence 348999999999999999999999994200 234677788899996 543333310 00
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
.+.+ ..+||+|++ |+.+++++++++++|+||||+.+|+
T Consensus 96 ~~~~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~~~Di 133 (161)
T TIGR01261 96 DDNC----------------------------DCRKPKIKL--------------LEPYLKKNLIDKARSYVIGDRETDM 133 (161)
T ss_pred CCCC----------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCCHHHH
Confidence 0111 234888888 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEecC
Q 019086 331 AGAQRIGMPCVVMRS 345 (346)
Q Consensus 331 ~aA~~aG~~~i~v~~ 345 (346)
.+|+++||.++++..
T Consensus 134 ~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 134 QLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHCCCeEEEECh
Confidence 999999999999875
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-15 Score=140.13 Aligned_cols=100 Identities=7% Similarity=0.090 Sum_probs=73.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..+.+++.++|+.|+++|++++++||...+ .+..++.+++.+|+..+|+.. ++. +.....
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i-~~~--------------d~~~~~---- 173 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVI-FAG--------------DKPGQY---- 173 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEE-ECC--------------CCCCCC----
Confidence 447778999999999999999999994211 456888999999999877543 222 111100
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
||++ . .+++..|+ ++||||+.+||.+|+++|+.+|
T Consensus 174 ------------------------Kp~~----------------~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 174 ------------------------QYTK----------------T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred ------------------------CCCH----------------H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEE
Confidence 2221 2 23566666 8999999999999999999999
Q ss_pred EecCC
Q 019086 342 VMRSR 346 (346)
Q Consensus 342 ~v~~~ 346 (346)
.|.++
T Consensus 209 ~V~~g 213 (237)
T TIGR01672 209 RILRA 213 (237)
T ss_pred EEEec
Confidence 98753
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=138.09 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=76.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|+ +....++.+++++ +.. + .+++. +....++.+.
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~--~-~i~~n--------~~~~~~~~~~------- 130 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPK--E-QIYCN--------GSDFSGEYIT------- 130 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCc--C-cEEEe--------EEEecCCeeE-------
Confidence 57999999999999999999999999 7788999999987 643 1 11111 1112222221
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCC---CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDT---SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~---p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
..||+|.... ..... ...++++++.++++||+|||+.+|+.+|++||+.
T Consensus 131 ---------------------~~kp~p~~~~~~~~~~~~-------K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~ 182 (219)
T PRK09552 131 ---------------------ITWPHPCDEHCQNHCGCC-------KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKV 182 (219)
T ss_pred ---------------------EeccCCccccccccCCCc-------hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcc
Confidence 2266655310 00000 2357788999999999999999999999999995
Q ss_pred EE
Q 019086 340 CV 341 (346)
Q Consensus 340 ~i 341 (346)
++
T Consensus 183 ~a 184 (219)
T PRK09552 183 FA 184 (219)
T ss_pred ee
Confidence 44
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.8e-15 Score=131.71 Aligned_cols=103 Identities=12% Similarity=0.107 Sum_probs=74.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++ ++++|+|| +....++.+++++|+..+|...+...+++ ++.|..
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------~i~~~~--------- 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------MITGYD--------- 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCC-------eEECcc---------
Confidence 56899999999999999 99999999 77899999999999988775432221110 111110
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+|. | ++ ...+++.++..+++|++|||+.+|+.+++++|+.+.+
T Consensus 127 -----------------------~~~-----p--~~-------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~ 169 (205)
T PRK13582 127 -----------------------LRQ-----P--DG-------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF 169 (205)
T ss_pred -----------------------ccc-----c--ch-------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE
Confidence 111 1 11 2334556666679999999999999999999987643
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-15 Score=135.37 Aligned_cols=184 Identities=16% Similarity=0.215 Sum_probs=121.1
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
..++++|||||||++. ..+..+....|.. ..+.......+....++...+..++.+-...+.+.
T Consensus 4 ~~~L~vFD~D~TLi~~------~~~~~~~~~~g~~------~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~---- 67 (212)
T COG0560 4 MKKLAVFDLDGTLINA------ELIDELARGAGVG------EEVLAITERAMRGELDFEESLRLRVALLKGLPVEV---- 67 (212)
T ss_pred ccceEEEecccchhhH------HHHHHHHHHhCCH------HHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHH----
Confidence 4679999999999982 3445566666665 22222222222223333333333332222222111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
..+.. ....+++||+.++++.++++|.+|+|+|+ ++...++.+.+.+|++..+...+...+ +
T Consensus 68 -----------v~~~~-~~~~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d-G-- 129 (212)
T COG0560 68 -----------LEEVR-EEFLRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD-G-- 129 (212)
T ss_pred -----------HHHHH-HhcCcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC-C--
Confidence 11111 11156999999999999999999999999 889999999999999988766544432 2
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.|+.-+.|..+... ..+.+++..++.+|++++++++
T Consensus 130 -~ltG~v~g~~~~~~-------------------------------------------~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 -KLTGRVVGPICDGE-------------------------------------------GKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred -EEeceeeeeecCcc-------------------------------------------hHHHHHHHHHHHcCCCHHHeEE
Confidence 34444444333210 1112388889999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEec
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+|||.||+.|.+.+|.+.++-+
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~ 187 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNP 187 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCc
Confidence 9999999999999999987643
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-15 Score=132.87 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCc---------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~---------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~ 255 (346)
++||+.++|+.|+++|++++|+||..... ...+..+++.+|+.. +..+ +.++.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii-~~~~~--------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLA-ATHAG--------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEE-ecCCC---------------
Confidence 68999999999999999999999942100 024677889999853 2222 22110
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCCh------
Q 019086 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 327 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~p~e~i~VGDs~------ 327 (346)
..+||+|++ ++.+++++| +++++|+||||+.
T Consensus 105 ---------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 105 ---------------------------LYRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ---------------------------CCCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 113788887 999999999 9999999999986
Q ss_pred --hhHHHHHHcCCCEEE
Q 019086 328 --SGVAGAQRIGMPCVV 342 (346)
Q Consensus 328 --~Di~aA~~aG~~~i~ 342 (346)
.|+++|+++|+.+++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-14 Score=128.90 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=83.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
.++||+.++|+.++++|++++|+|+ +.+..++.+++.+|++.+|...+...++ ++.+|
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~-------------g~~~g------ 144 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESED-------------GIYTG------ 144 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCC-------------CEEeC------
Confidence 4899999999999999999999999 7789999999999999876553221111 11111
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
|+..... ..+.+ +..++..+++.++++++|++|||+.+|+.+++.+|..+++.
T Consensus 145 ----------------------~~~~~~~--~g~~K---~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 ----------------------NIDGNNC--KGEGK---VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ----------------------CccCCCC--CChHH---HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 1110000 01111 12378888899999999999999999999999999998876
Q ss_pred cC
Q 019086 344 RS 345 (346)
Q Consensus 344 ~~ 345 (346)
++
T Consensus 198 ~~ 199 (202)
T TIGR01490 198 PD 199 (202)
T ss_pred CC
Confidence 54
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-14 Score=117.84 Aligned_cols=117 Identities=20% Similarity=0.142 Sum_probs=85.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++|++.++|++|+++|++++++|+ +....++..++.+|+..+++..+.+...... .....+. . +
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~--~-~----- 88 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATN---KSRREVLELLEELGLDDYFDPVITSNGAAIY---YPKEGLF--L-G----- 88 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHHHcCCchhhhheeccchhhhh---ccccccc--c-c-----
Confidence 45899999999999999999999999 6688899999999998776664433221110 0000000 0 0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.......||.+.. +..+++.++..++++++|||+.+|+.+++.+|+.+++
T Consensus 89 ----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 89 ----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred ----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 0001112444444 8999999999999999999999999999999999987
Q ss_pred e
Q 019086 343 M 343 (346)
Q Consensus 343 v 343 (346)
|
T Consensus 139 v 139 (139)
T cd01427 139 V 139 (139)
T ss_pred C
Confidence 5
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-14 Score=125.47 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=74.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.. ++++....+ ..+..+..-
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~~~--~g~~~~~~~-------- 136 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISD---GNDFFIDPVLEGIGEKDVFIEI-YSNPASFDN--DGRHIVWPH-------- 136 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHHcCChhheeEE-eccCceECC--CCcEEEecC--------
Confidence 57999999999999999999999999 6788899999999999888764 443221110 001111000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
+...-...+....++.+ ++...+.. +++++||||+.+|+.+|+++++-.
T Consensus 137 -----------------------~~~~~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 137 -----------------------HCHGCCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred -----------------------CCCccCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 00000000111112333 55555443 899999999999999999987644
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.6e-14 Score=126.36 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=103.3
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCC--CCCChhHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPT--SVPTNEKKA 161 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~--~~~~~~~~~ 161 (346)
++.++|||||||++. .|.+...+.|+.. .. ... .....+.++...+..... .++
T Consensus 1 ~~la~FDlD~TLi~~-------~w~~~~~~~g~~~------~~-~~~----~~~~~~~~~~~~r~~ll~~~g~~------ 56 (203)
T TIGR02137 1 MEIACLDLEGVLVPE-------IWIAFAEKTGIDA------LK-ATT----RDIPDYDVLMKQRLRILDEHGLK------ 56 (203)
T ss_pred CeEEEEeCCcccHHH-------HHHHHHHHcCCcH------HH-HHh----cCCcCHHHHHHHHHHHHHHCCCC------
Confidence 356999999999964 4678888888651 11 111 122233333333332110 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.+.+.+.+. ..+++||+.++|+.++++| +++|+|+ +....+..+++.+|++.+|...+...+.
T Consensus 57 ---------~~~i~~~~~--~i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~-- 119 (203)
T TIGR02137 57 ---------LGDIQEVIA--TLKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDS-- 119 (203)
T ss_pred ---------HHHHHHHHH--hCCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecC--
Confidence 111222331 2468999999999999985 9999999 7889999999999999877643222110
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
..++|..+.. ||. + .. +...++..| .+|+
T Consensus 120 -----g~~tG~~~~~-----------------------------~~~-------K---~~----~l~~l~~~~---~~~v 148 (203)
T TIGR02137 120 -----DRVVGYQLRQ-----------------------------KDP-------K---RQ----SVIAFKSLY---YRVI 148 (203)
T ss_pred -----CeeECeeecC-----------------------------cch-------H---HH----HHHHHHhhC---CCEE
Confidence 1112221100 111 1 11 222334555 3899
Q ss_pred EEcCChhhHHHHHHcCCCEEEec
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+|||+.||+.|++.||+..++-.
T Consensus 149 ~vGDs~nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 149 AAGDSYNDTTMLSEAHAGILFHA 171 (203)
T ss_pred EEeCCHHHHHHHHhCCCCEEecC
Confidence 99999999999999999988643
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-14 Score=124.19 Aligned_cols=106 Identities=17% Similarity=0.250 Sum_probs=75.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.++++|++++|+|+ +....++.+++++|+..++...+...+++ ...|....
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-------~~~g~~~~------- 134 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNG-------LLTGPIEG------- 134 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCC-------EEeCccCC-------
Confidence 55899999999999999999999999 77899999999999987665443221111 11111000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a 336 (346)
||. |....++. +++..++.+|++++++++|||+.+|+.|++.|
T Consensus 135 -----------------------~~~-----~~~~~K~~---~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 -----------------------QVN-----PEGECKGK---VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -----------------------ccc-----CCcchHHH---HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000 11111222 27777888899999999999999999999865
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-13 Score=126.12 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=72.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|+ +.+..++.+++.++....+ ++++ ....+..+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i----~~n~--------~~~~~~~~~------- 126 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRI----YCNE--------ADFSNEYIH------- 126 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccE----Eece--------eEeeCCeeE-------
Confidence 57999999999999999999999999 7788899999887543221 1110 011111111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p-~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
..||+|..... ...... -..+++.++..++++++|||+.+|+.+|+.||+
T Consensus 127 ---------------------~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 127 ---------------------IDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred ---------------------EeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 12565554210 000000 134566777788999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.5e-14 Score=125.35 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=77.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-----c-------hhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----G-------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-----~-------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
++++||+.++|++|+++|++++|+||...- . ......++..+++. |+..+.+. ..
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~-----------~~ 91 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCP-----------HH 91 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECC-----------CC
Confidence 348999999999999999999999994310 0 01223344444444 22211110 00
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
..++.. +.+....+||+|++ |+.+++++|+++++|+||||+..||
T Consensus 92 ~~~~~~---------------------~~~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~Di 136 (176)
T TIGR00213 92 PEGVEE---------------------FRQVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLEDM 136 (176)
T ss_pred Cccccc---------------------ccCCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHHH
Confidence 000000 00001234888888 9999999999999999999999999
Q ss_pred HHHHHcCCCE-EEecC
Q 019086 331 AGAQRIGMPC-VVMRS 345 (346)
Q Consensus 331 ~aA~~aG~~~-i~v~~ 345 (346)
++|+++|+.+ +++++
T Consensus 137 ~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 137 QAGVAAKVKTNVLVRT 152 (176)
T ss_pred HHHHHCCCcEEEEEec
Confidence 9999999998 78765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.7e-14 Score=120.45 Aligned_cols=90 Identities=19% Similarity=0.331 Sum_probs=76.2
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
-|.+++.+++++++|+++.|+|| +.+..+....+++|+.-+...
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A--------------------------------- 91 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA--------------------------------- 91 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc---------------------------------
Confidence 34556778899999999999999 778889999999999864322
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEec
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~ 344 (346)
.||.+.- |+.++++++++++||+||||.. .||.++..+||.||+|.
T Consensus 92 -------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 92 -------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred -------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 1555444 9999999999999999999997 89999999999999984
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=122.34 Aligned_cols=88 Identities=19% Similarity=0.312 Sum_probs=75.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--chhheecchhhHHHhhhhccccccccccCcch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
.+++|++.++|+.|+++|++++++|+ .....+..+.+.+|+.+ .|.... +
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~v~a~~~----------------------~--- 177 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSIVFARVI----------------------G--- 177 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEEEEESHE----------------------T---
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccccccccc----------------------c---
Confidence 45789999999999999999999999 77899999999999954 221100 1
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
||++.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 178 -------------------------kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 -------------------------KPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------------TTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------------cccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 566665 99999999999999999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3e-12 Score=116.34 Aligned_cols=191 Identities=12% Similarity=0.068 Sum_probs=112.7
Q ss_pred CceEEEEeccCccccccccccHHHHHHHH-HHcCCCCCCCChHHHHHHHhhccCChHHH-----HHHHHHH-hCCCCCCC
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM-----LVLFFNR-IGWPTSVP 155 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~-~~~gi~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~-~g~~~~~~ 155 (346)
..|+++||+||||++... ...|..++ .++|+.. ........+.+......... ...++.. .+. +
T Consensus 5 ~~k~~iFD~DGTL~~~d~---~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~----~ 75 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDM---FGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGH----S 75 (211)
T ss_pred cceEEEEecCCCCcccch---HHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCC----C
Confidence 467999999999995554 47788877 8888762 22222222222110000000 0001111 122 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHH-HHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL-~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
.+ .++.+.+.+.+.|.+. ..++||+.++| +.+++.|++++|+|| +++..++.++..+|+..... +
T Consensus 76 ~~----~~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~~~~--~ 141 (211)
T PRK11590 76 EA----RLQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLPRVN--L 141 (211)
T ss_pred HH----HHHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHccccccCc--e
Confidence 11 1334444444444332 35799999999 568889999999999 77899999999999632111 2
Q ss_pred cchh-hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc
Q 019086 235 VGNE-EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (346)
Q Consensus 235 ~~~~-e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l 313 (346)
++.+ +. .|++.+.|... .+.|| ...+-+.+
T Consensus 142 i~t~l~~---~~tg~~~g~~c---------------~g~~K-------------------------------~~~l~~~~ 172 (211)
T PRK11590 142 IASQMQR---RYGGWVLTLRC---------------LGHEK-------------------------------VAQLERKI 172 (211)
T ss_pred EEEEEEE---EEccEECCccC---------------CChHH-------------------------------HHHHHHHh
Confidence 2221 11 23333322211 11122 34444455
Q ss_pred CCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 314 gv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|.+.+.+.+.|||.+|+.+.+.+|-+.++-++
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 77788899999999999999999999887554
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.1e-13 Score=127.89 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=39.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++|+||||+. .||.+|+++||.+|+|+++
T Consensus 208 ~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 208 FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 9999999999999999999995 9999999999999999874
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-13 Score=119.53 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|+.|+++|++++|+|| +. ...+..+++.+|+..++.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn---~~~~~~~~~~~~~~gl~~~~~------------------------------ 88 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSN---NAGEQRAKAVEKALGIPVLPH------------------------------ 88 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeC---CchHHHHHHHHHHcCCEEEcC------------------------------
Confidence 46899999999999999999999999 44 455666666666653210
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~ 340 (346)
..||+|.+ |..+++++|+++++|+||||+. .|+.+|+++||.+
T Consensus 89 ----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 89 ----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 11788877 9999999999999999999998 7999999999999
Q ss_pred EEecCC
Q 019086 341 VVMRSR 346 (346)
Q Consensus 341 i~v~~~ 346 (346)
|+|.++
T Consensus 133 i~v~~g 138 (170)
T TIGR01668 133 ILVEPL 138 (170)
T ss_pred EEEccC
Confidence 999764
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-13 Score=118.87 Aligned_cols=82 Identities=13% Similarity=0.154 Sum_probs=69.9
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|++|+++|++++|+|| .....+..+++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn---~~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITG---RKAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEEC---CCCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 68899999999999999 6678889999999998765421
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
||.|+. ++.+++++|+++++|++|||+.+|+.+++.+|+. +.+
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v 117 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAV 117 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-Eec
Confidence 333444 8999999999999999999999999999999997 444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.6e-13 Score=123.29 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=74.5
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
++++.+.+..|++.+.+++++||. ...........+|+..+|+....+. .++.+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~---~~~~~~~~~~~~g~g~~~~~i~~~~------------~~~~~----------- 175 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGK---GRYYKRKDGLALDVGPFVTALEYAT------------DTKAT----------- 175 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCC---CCCCcCCCCCCCCchHHHHHHHHHh------------CCCce-----------
Confidence 578888899999999999999983 3333333444556665554321000 00000
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEec
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~ 344 (346)
...||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||.+|+|.
T Consensus 176 -----------------~~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 224 (257)
T TIGR01458 176 -----------------VVGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVR 224 (257)
T ss_pred -----------------eecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 012666666 9999999999999999999996 89999999999999997
Q ss_pred CC
Q 019086 345 SR 346 (346)
Q Consensus 345 ~~ 346 (346)
++
T Consensus 225 ~G 226 (257)
T TIGR01458 225 TG 226 (257)
T ss_pred CC
Confidence 64
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-12 Score=111.45 Aligned_cols=119 Identities=18% Similarity=0.317 Sum_probs=92.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
.++|.||||.|++..+.+ .+.....|+. +......+..+++..++.+.+..++.+
T Consensus 16 ~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~l------------- 70 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLSL------------- 70 (227)
T ss_pred cCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHHH-------------
Confidence 469999999999987765 5666677887 666667777777788887788777633
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--chhhe
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIK 233 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~f~~~ 233 (346)
+.-.......++......+-||++|++..|+++|.+|+++|+ +++..+..+.+.||++. .+...
T Consensus 71 ---lqp~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~ 136 (227)
T KOG1615|consen 71 ---LQPLQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANE 136 (227)
T ss_pred ---hcccHHHHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhhe
Confidence 333333344444455688999999999999999999999999 99999999999999985 44433
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.5e-12 Score=121.33 Aligned_cols=41 Identities=10% Similarity=-0.005 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++++||||+. .||.+|+++||.+|+|.++
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G 277 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 277 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCC
Confidence 9999999999999999999997 8999999999999999764
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.4e-12 Score=116.69 Aligned_cols=98 Identities=7% Similarity=0.163 Sum_probs=71.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCc--ccchhheecchhhHHHhhhhccccccccccCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl--~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~ 259 (346)
..+.||+.++|+.|+++|++++++||...+ .+..+..+++.+|+ .++|+.. ++. +.. .
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi-l~g--------------d~~--~-- 173 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI-FAG--------------DKP--G-- 173 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE-EcC--------------CCC--C--
Confidence 558999999999999999999999994211 24567777878999 7766543 222 110 0
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
||+ +. .+++.+++ +|||||+.+|+.+|++||+.
T Consensus 174 --------------------------K~~-------K~----------~~l~~~~i----~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 174 --------------------------QYT-------KT----------QWLKKKNI----RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --------------------------CCC-------HH----------HHHHhcCC----eEEEcCCHHHHHHHHHcCCc
Confidence 222 11 13456665 99999999999999999999
Q ss_pred EEEecCC
Q 019086 340 CVVMRSR 346 (346)
Q Consensus 340 ~i~v~~~ 346 (346)
+|.|.++
T Consensus 207 ~I~v~~G 213 (237)
T PRK11009 207 GIRILRA 213 (237)
T ss_pred EEEEecC
Confidence 9998764
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-12 Score=121.58 Aligned_cols=228 Identities=14% Similarity=0.116 Sum_probs=133.4
Q ss_pred CCCceEEEEeccCccccccc-cccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCC-hHHHHHHHHHH-hCCCCCCCCh
Q 019086 81 PPRDLAVLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNR-IGWPTSVPTN 157 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~-~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~-~g~~~~~~~~ 157 (346)
...+++++||+||||++... +.-...+.+.+++.|++. ++-..++. ..++....+.. .+.+...
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~----------iflTNn~~~s~~~~~~~L~~~~~~~~~~--- 71 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV----------IFLTNNSTRSREVVAARLSSLGGVDVTP--- 71 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE----------EEEeCCCCCCHHHHHHHHHhhcCCCCCH---
Confidence 34688999999999998554 222344555666788873 11111122 22223333333 3332211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
+.++.. ......|.........-..=|...+.+.|+..|+.+.-..+ . ....+--+|+++.+.+
T Consensus 72 --~~i~TS--~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~---~----~~~d~Vv~g~d~~~~~----- 135 (269)
T COG0647 72 --DDIVTS--GDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEE---P----ARVDAVVVGLDRTLTY----- 135 (269)
T ss_pred --HHeecH--HHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCC---C----CcccEEEEecCCCCCH-----
Confidence 011111 11111222111011122344666777788888776654333 1 1111112233322211
Q ss_pred hhHHHhhhhccccc-cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 019086 238 EEVERSLYGQFVLG-KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (346)
Q Consensus 238 ~e~~~~~f~~i~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~ 316 (346)
+.....+..+..| ..+...+|-..+.+.+-.++++-..-+.+.+..++| ..++||++. .|+.+++.++.+
T Consensus 136 -e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~-~~~GKP~~~-------i~~~al~~~~~~ 206 (269)
T COG0647 136 -EKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP-TVIGKPSPA-------IYEAALEKLGLD 206 (269)
T ss_pred -HHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc-cccCCCCHH-------HHHHHHHHhCCC
Confidence 1111123333333 334555666666667777888888889999999999 888887766 399999999999
Q ss_pred CCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 317 p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
.++++||||+. .||.+|+++||.+++|.++
T Consensus 207 ~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TG 237 (269)
T COG0647 207 RSEVLMVGDRLDTDILGAKAAGLDTLLVLTG 237 (269)
T ss_pred cccEEEEcCCchhhHHHHHHcCCCEEEEccC
Confidence 99999999997 7999999999999999874
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-12 Score=120.84 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=88.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecchhhHHHhhhhccccccccccCcch
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
...++||+.++|+.|+++|++++++|| ......+..++.+++.. +|+.. ++.+....
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~---r~~~~~~~~l~~l~~~~~~f~~i-~~~~~~~~------------------ 242 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSG---RDGVCEEDTVEWLRQTDIWFDDL-IGRPPDMH------------------ 242 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeC---CChhhHHHHHHHHHHcCCchhhh-hCCcchhh------------------
Confidence 456899999999999999999999999 66788999999999986 77653 22221100
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCC-CCCcEEEEcCChhhHHHHHHcCCC
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv-~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
+......+||+|.+ ++.++++++. ++++|++|||+.+|+.+|+++||.
T Consensus 243 -----------------~~~~~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 243 -----------------FQREQGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred -----------------hcccCCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 00000123777777 9999999988 679999999999999999999999
Q ss_pred EEEecCC
Q 019086 340 CVVMRSR 346 (346)
Q Consensus 340 ~i~v~~~ 346 (346)
+|+|.++
T Consensus 292 ~i~v~~g 298 (300)
T PHA02530 292 CWQVAPG 298 (300)
T ss_pred EEEecCC
Confidence 9999875
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.6e-11 Score=112.15 Aligned_cols=41 Identities=10% Similarity=0.243 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++.+++++++|+||||+. .||.+|+++|+.+++|.++
T Consensus 180 ~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G 221 (248)
T PRK10444 180 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 221 (248)
T ss_pred HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCC
Confidence 9999999999999999999997 8999999999999999864
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-11 Score=111.52 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=71.6
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
+|++.++++.++++|+++ |+||. +.......+..+|...++.... . ..++.+.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~---d~~~~~~~~~~~~~g~~~~~i~------------~-~g~~~~~---------- 192 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANP---DRGINQHGIYRYGAGYYAELIK------------Q-LGGKVIY---------- 192 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECC---CEeccCCCceEecccHHHHHHH------------H-hCCcEec----------
Confidence 689999999998899997 88993 3444444445555544433210 0 1111111
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCC-hhhHHHHHHcCCCEEEe
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~-p~e~i~VGDs-~~Di~aA~~aG~~~i~v 343 (346)
..||+|.+ |+.+++++|.. +++|+||||+ .+||.+|+++||.+++|
T Consensus 193 ------------------~gKP~~~~--------------~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 193 ------------------SGKPYPAI--------------FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred ------------------CCCCCHHH--------------HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 12677666 99999999975 6799999999 59999999999999998
Q ss_pred cC
Q 019086 344 RS 345 (346)
Q Consensus 344 ~~ 345 (346)
++
T Consensus 241 ~t 242 (242)
T TIGR01459 241 LT 242 (242)
T ss_pred eC
Confidence 75
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.2e-10 Score=106.86 Aligned_cols=41 Identities=5% Similarity=0.207 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++.+++++++++||||+. .||.+|+++||++|+|.++
T Consensus 184 ~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G 225 (249)
T TIGR01457 184 MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTG 225 (249)
T ss_pred HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCC
Confidence 9999999999999999999997 8999999999999999764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-10 Score=116.73 Aligned_cols=94 Identities=19% Similarity=0.178 Sum_probs=68.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.++.+||+.++|++++++|++++++|+ +++..++.+++++|+ |+. +++.++...
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl---Fd~-Vigsd~~~~------------------- 123 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL---FDG-VFASDGTTN------------------- 123 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC---CCE-EEeCCCccc-------------------
Confidence 356889999999999999999999999 778999999999997 443 333322111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.||+++ .+.+.+.++ .++++++||+.+|+.+++.+|-..+
T Consensus 124 ------------------------------~kg~~K--------~~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~~av~ 163 (479)
T PRK08238 124 ------------------------------LKGAAK--------AAALVEAFG--ERGFDYAGNSAADLPVWAAARRAIV 163 (479)
T ss_pred ------------------------------cCCchH--------HHHHHHHhC--ccCeeEecCCHHHHHHHHhCCCeEE
Confidence 122222 233445555 3669999999999999999994443
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-11 Score=118.48 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=79.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCC---CC---------chhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYG---KS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~---~~---------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
..++||+.++|++|+++|++++|+||.. .+ .......+++.+|+. |+..+++.. ..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~----------~~ 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPH----------FP 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCC----------cC
Confidence 4599999999999999999999999931 00 123455566777773 333222210 00
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
.+.. ..+||+|.+ +..+++.+++++++++||||+.+|+
T Consensus 97 sd~~----------------------------~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 97 EDNC----------------------------SCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred cccC----------------------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHH
Confidence 0111 123788777 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEec
Q 019086 331 AGAQRIGMPCVVMR 344 (346)
Q Consensus 331 ~aA~~aG~~~i~v~ 344 (346)
.+|+++||.+|++.
T Consensus 135 ~aAk~aGi~~I~v~ 148 (354)
T PRK05446 135 QLAENMGIKGIRYA 148 (354)
T ss_pred HHHHHCCCeEEEEE
Confidence 99999999999984
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-11 Score=115.36 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=76.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH----hCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~----lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
++||+.++|..|+++|++++|+|+ +....+..++++ +++.++|+....+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~~~------------------------ 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARSIN------------------------ 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEEEe------------------------
Confidence 578999999999999999999999 778889999998 8888877653211
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
.||+|+. ++.+++++|+.+++++||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 0555555 9999999999999999999999999999997753
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.1e-10 Score=104.54 Aligned_cols=111 Identities=23% Similarity=0.275 Sum_probs=79.8
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
..+++.||+.++++.|+++|++++|+|+ +....++.+++.+|+.+.+. .++++.- ....+++..|
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~lgl~~~~~-~IvSN~L--------~f~~dGvltG--- 182 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQAGVYHPNV-KVVSNFM--------DFDEDGVLKG--- 182 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHHcCCCCcCc-eEEeeeE--------EECCCCeEeC---
Confidence 4688999999999999999999999999 78899999999999864442 2433311 0112334444
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChhhHHHHHHc
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~p~e~i~VGDs~~Di~aA~~a 336 (346)
||.|-|-.-.+ ... +++.+++.++ .++++||+|||+.+|+.||.-+
T Consensus 183 -------------------------~~~P~i~~~~K--~~~---v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 183 -------------------------FKGPLIHTFNK--NHD---VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred -------------------------CCCCccccccc--HHH---HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 45553311111 111 2667888998 8999999999999999998765
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.3e-10 Score=105.12 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 203 ~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 203 RLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred HHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 38999999999999999999999999999999986543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.9e-11 Score=105.10 Aligned_cols=94 Identities=21% Similarity=0.196 Sum_probs=75.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc-hhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~-f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|+.|+ ++++++|+|+ +....++.+++++++..+ |+. +++.++ +..+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts---~~~~~~~~il~~l~~~~~~f~~-i~~~~d--------------~~~~---- 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTA---GLRMYADPVLDLLDPKKYFGYR-RLFRDE--------------CVFV---- 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeC---CcHHHHHHHHHHhCcCCCEeee-EEECcc--------------cccc----
Confidence 458999999999999 5799999999 778999999999999653 344 233322 2111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
||+ |..+++++|++|++||+|||+..|+.++.++|+.+
T Consensus 101 ------------------------KP~-----------------~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 ------------------------KGK-----------------YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred ------------------------CCe-----------------EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 443 45678999999999999999999999999999875
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.15 E-value=5e-11 Score=104.66 Aligned_cols=101 Identities=16% Similarity=0.291 Sum_probs=68.6
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc----------cchhheecchhhHHHhhhhccccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~----------~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
.+.++|++.+.|.+|+++|++++++|.. +..+.++.+|+.+++. ++|+..
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~------------------ 102 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYL------------------ 102 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEE------------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchh------------------
Confidence 3669999999999999999999999963 3457899999999999 544432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
+|+..++. +=|+.+.+..|++.++++||+|-..++.
T Consensus 103 --------------------------------------eI~~gsK~------~Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 103 --------------------------------------EIYPGSKT------THFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp --------------------------------------EESSS-HH------HHHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred --------------------------------------heecCchH------HHHHHHHHhcCCChhHEEEecCchhcce
Confidence 11111111 1188889999999999999999999999
Q ss_pred HHHHcCCCEEEecCC
Q 019086 332 GAQRIGMPCVVMRSR 346 (346)
Q Consensus 332 aA~~aG~~~i~v~~~ 346 (346)
..+..|..+|.|+++
T Consensus 139 ~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDG 153 (169)
T ss_dssp HHHTTT-EEEE-SSS
T ss_pred eeEecCcEEEEeCCC
Confidence 999999999999874
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.1e-11 Score=103.59 Aligned_cols=83 Identities=16% Similarity=0.090 Sum_probs=72.2
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|..|+++|++++|+|| +....++..++.+|+..+|+..
T Consensus 42 ~~~~L~~~Gi~laIiT~---k~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 80 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITS---KKSGAVRHRAEELKIKRFHEGI-------------------------------------- 80 (169)
T ss_pred HHHHHHHCCCEEEEEEC---CCcHHHHHHHHHCCCcEEEecC--------------------------------------
Confidence 35678899999999999 7789999999999999876531
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
||+|+. ++.+++++|+++++|++|||+.+|+.|++.+|+..++-
T Consensus 81 --------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 81 --------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred --------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 555555 99999999999999999999999999999999987753
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.5e-11 Score=99.02 Aligned_cols=87 Identities=8% Similarity=0.012 Sum_probs=69.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhC-------cccchhheecchhhHHHhhhhcccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lg-------l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~ 256 (346)
++||+.++|+.|+++|++++|+|| + ....+...++.++ +.++|+..+ .+.
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn---~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~---------------~~~---- 87 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASY---NDDPHVAYELLKIFEDFGIIFPLAEYFDPLT---------------IGY---- 87 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeC---CCCHHHHHHHHHhccccccchhhHhhhhhhh---------------hcC----
Confidence 789999999999999999999999 5 6777888888887 555555432 111
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChhhHHHHH
Q 019086 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 334 (346)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~p~e~i~VGDs~~Di~aA~ 334 (346)
.||+|.+ |..+++++| ++|++|+||||+..|+...+
T Consensus 88 ----------------------------~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 88 ----------------------------WLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ----------------------------CCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 1455555 999999999 99999999999999988766
Q ss_pred H
Q 019086 335 R 335 (346)
Q Consensus 335 ~ 335 (346)
.
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.7e-09 Score=97.07 Aligned_cols=108 Identities=12% Similarity=0.033 Sum_probs=71.3
Q ss_pred CCCCcHHHHHH-HHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh-hHHHhhhhccccccccccCcchh
Q 019086 184 PLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 184 ~~~pgv~elL~-~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~-e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.++||+.++|+ .++++|++++|+|| +++..++.+.+..++....+ +++.+ ++. .+..+.|. +.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~--~i~t~le~~---~gg~~~g~------~c- 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN--LIASQIERG---NGGWVLPL------RC- 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc--EEEEEeEEe---CCceEcCc------cC-
Confidence 47999999996 78889999999999 77899999998866533222 22221 110 11111111 00
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+.|| ...+.+.+|.+.+.+.+.|||.+|+.|.+.+|-+.+
T Consensus 159 --------~g~~K-------------------------------v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 159 --------LGHEK-------------------------------VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWR 199 (210)
T ss_pred --------CChHH-------------------------------HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEE
Confidence 11122 333334446566789999999999999999999988
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
+-++
T Consensus 200 Vnp~ 203 (210)
T TIGR01545 200 VSKR 203 (210)
T ss_pred ECcc
Confidence 7554
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.4e-10 Score=115.56 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=72.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCC---------chhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~---------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~ 255 (346)
++||+.+.|..|+++|++++|+||...- ....+..+++.+|+. |+. +++.++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdv-iia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQV-FIAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEE-EEeCCCC---------------
Confidence 6899999999999999999999995320 013467788888875 443 2222110
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCChhhHH
Q 019086 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg----v~p~e~i~VGDs~~Di~ 331 (346)
..+||+|++ +..+++.++ +++++++||||+..|+.
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 234888888 999999884 89999999999999998
Q ss_pred HHHHcCCC
Q 019086 332 GAQRIGMP 339 (346)
Q Consensus 332 aA~~aG~~ 339 (346)
+|+++|..
T Consensus 299 ~g~~ag~~ 306 (526)
T TIGR01663 299 NGKAAGKK 306 (526)
T ss_pred HHHhcCCC
Confidence 88887753
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.3e-10 Score=99.65 Aligned_cols=52 Identities=6% Similarity=-0.056 Sum_probs=46.7
Q ss_pred HHhhccccccCCCCCchhHHHHHHH--HHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 282 ASMLKLSVDIDTSSPESLDKIVAAL--RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 282 ~~~~KP~p~i~~p~~~~~~~~~~~~--~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++.||+|.| + .| +.++++.|+.|++|+||+|...++++|+++||.++.+++
T Consensus 153 ~gl~KPdp~i----K--------~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 153 LGLDAPMPLD----K--------SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred hcccCCCccc----h--------HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 4667999998 2 27 999999999999999999999999999999999999875
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.6e-09 Score=103.33 Aligned_cols=71 Identities=11% Similarity=0.177 Sum_probs=51.2
Q ss_pred HhhHHHHHHHHHHH----Hhhcccc-ccCCCCCchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEcCCh-hh
Q 019086 269 AVSAQKQEIAEEVA----SMLKLSV-DIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SG 329 (346)
Q Consensus 269 ~~~~~~~~~~~~~~----~~~KP~p-~i~~p~~~~~~~~~~~~~~~~e~l--------gv-----~p~e~i~VGDs~-~D 329 (346)
.++.+-..-+.+.+ ..+.|.+ .++||++.. |+.+++.+ ++ ++++++||||+. .|
T Consensus 204 ~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~~~-------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tD 276 (321)
T TIGR01456 204 RFGQGAFRLLLERIYLELNGKPLQYYTLGKPTKLT-------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASD 276 (321)
T ss_pred eechHHHHHHHHHHHHHhcCCCcceEEcCCCChHH-------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhh
Confidence 45566655555553 3334443 458888774 67666666 43 457999999998 89
Q ss_pred HHHHHHcCCCEEEecCC
Q 019086 330 VAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~~ 346 (346)
|.+|+++||.+|+|+++
T Consensus 277 I~ga~~~G~~silV~tG 293 (321)
T TIGR01456 277 IIGAQNYGWFSCLVKTG 293 (321)
T ss_pred hhhHHhCCceEEEeccc
Confidence 99999999999999864
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-08 Score=94.36 Aligned_cols=115 Identities=14% Similarity=0.239 Sum_probs=72.2
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
.|+||+|+||+|.... ..+++.++.. .+..+.. ..... +....++...+..+...
T Consensus 2 LvvfDFD~TIvd~dsd------~~v~~~l~~~--~~~~~l~-~~~~~--~~wt~~m~~vl~~L~~~-------------- 56 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD------DWVIELLPPE--ELPEELR-ESYPK--GGWTEYMDRVLQLLHEQ-------------- 56 (234)
T ss_pred EEEEeCCCCccCCccH------HHHHHhcCCc--ccHHHHH-Hhccc--cchHHHHHHHHHHHHHc--------------
Confidence 6899999999998875 3345555544 1222222 22211 22223323333222110
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHH--HhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L--~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (346)
....+.+.+.+ +..++.||+.++++.+ +..|+.+.|+|. +...+.+.++++.|+...|+-
T Consensus 57 --gvt~~~I~~~l--~~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~ 118 (234)
T PF06888_consen 57 --GVTPEDIRDAL--RSIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSE 118 (234)
T ss_pred --CCCHHHHHHHH--HcCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccce
Confidence 01112223333 3478999999999999 567999999999 778999999999999988765
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.1e-09 Score=96.84 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCCCcE-EEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~-i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.++++++++++++ +||||+. .||.+|+++||.+|+|.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999999999887 9999998 8999999999999999875
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-09 Score=96.16 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=66.9
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|+.|+++|++++|+|| .....+..+++.+|+..+|.. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~---~~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITG---RKSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeC---CCcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 55677889999999999 667889999999999876531 0
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
++.+. +++.+++++|+++++|+||||+.+|+.+++++|+.++
T Consensus 95 --------------~~k~~--------------~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 95 --------------SNKLI--------------AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred --------------CcHHH--------------HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 11112 2899999999999999999999999999999999954
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.9e-10 Score=84.34 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=44.9
Q ss_pred hccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecCC
Q 019086 285 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 285 ~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~~ 346 (346)
+||+|.+ |+.+++++++++++|+||||+ ..||.+|+++||.+|+|.++
T Consensus 3 gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG 51 (75)
T PF13242_consen 3 GKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTG 51 (75)
T ss_dssp STTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSS
T ss_pred CCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCC
Confidence 4888888 999999999999999999999 79999999999999999874
|
... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.4e-08 Score=88.96 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=34.9
Q ss_pred HHHHHHHcCC-----CCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv-----~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
++.+++.++. .|+|+++|||.. .||.+|..+|+.+|+|+.+
T Consensus 120 ~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 120 FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 5666666654 499999999997 8999999999999999864
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.3e-09 Score=97.90 Aligned_cols=38 Identities=18% Similarity=0.130 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 198 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV 198 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe
Confidence 48999999999999999999999999999999998765
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.6e-09 Score=94.87 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||+.|++.+|+..++
T Consensus 153 ~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 190 (225)
T TIGR01482 153 AVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV 190 (225)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc
Confidence 38899999999999999999999999999999998654
|
catalyze the same reaction as SPP. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.6e-08 Score=87.86 Aligned_cols=39 Identities=23% Similarity=0.582 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
|++.++|+.++++|++++|+|+ ++...++.+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCc
Confidence 6666999999999999999999 78999999999999986
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.8e-08 Score=97.89 Aligned_cols=130 Identities=12% Similarity=0.065 Sum_probs=87.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh-C-------cccchhheecchhhHHHhhhhcccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQFVLGKGI 254 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l-g-------l~~~f~~~i~~~~e~~~~~f~~i~~g~~v 254 (346)
+...||+.++|+.|+++|++++|+|| +....+..+++.+ | +.++|+.+|.+... .++|+.-..=..|
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTN---S~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~K--P~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTN---SDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARK--PGFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCC--CcccCCCCceEEE
Confidence 55799999999999999999999999 6789999999996 7 88999986655432 2344421000111
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHH
Q 019086 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAG 332 (346)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i-~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~a 332 (346)
.... ...|+.... .+|......+= +....+.+|+.++++++|||+. .||.+
T Consensus 258 ~~~~------------------------g~~~~~~~~~l~~g~vY~gGn---~~~~~~~l~~~~~~vlYvGD~i~~Di~~ 310 (343)
T TIGR02244 258 DVET------------------------GSLKWGEVDGLEPGKVYSGGS---LKQFHELLKWRGKEVLYFGDHIYGDLLR 310 (343)
T ss_pred eCCC------------------------CcccCCccccccCCCeEeCCC---HHHHHHHHCCCCCcEEEECCcchHHHHh
Confidence 1000 000111110 11111111111 6778889999999999999997 79999
Q ss_pred HH-HcCCCEEEec
Q 019086 333 AQ-RIGMPCVVMR 344 (346)
Q Consensus 333 A~-~aG~~~i~v~ 344 (346)
++ .+||.||+|-
T Consensus 311 ~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 311 SKKKRGWRTAAII 323 (343)
T ss_pred hHHhcCcEEEEEc
Confidence 98 9999999874
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.2e-08 Score=91.69 Aligned_cols=48 Identities=15% Similarity=0.277 Sum_probs=38.0
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
...+.||+.++|+.|+++|++++++||............+.++|+...
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~ 163 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQA 163 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCC
Confidence 356899999999999999999999999543334445577788888753
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.9e-08 Score=90.99 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p-~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.+|+++ +++++|||+.||++|++.+|+.+++
T Consensus 194 al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam 232 (273)
T PRK00192 194 AVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV 232 (273)
T ss_pred HHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe
Confidence 4889999999999 9999999999999999999998775
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.8e-09 Score=97.98 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 229 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM 229 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec
Confidence 59999999999999999999999999999999987654
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.2e-08 Score=92.22 Aligned_cols=155 Identities=15% Similarity=0.037 Sum_probs=96.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH-------hhhhccccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER-------SLYGQFVLGKGIS 255 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~-------~~f~~i~~g~~v~ 255 (346)
.....|...+-++|++.|++.......+. .+......+...++++-...++++.++... ..|-+=.....+.
T Consensus 108 ~Vyvig~~gi~~eL~~aG~~~~g~~~~~~-~~~~~~~~~~~~~~d~~VgAVvvg~D~hfsy~KL~kA~~yLqnP~clfla 186 (306)
T KOG2882|consen 108 KVYVIGEEGIREELDEAGFEYFGGGPDGK-DTDGAKSFVLSIGLDPDVGAVVVGYDEHFSYPKLMKALNYLQNPGCLFLA 186 (306)
T ss_pred eEEEecchhhhHHHHHcCceeecCCCCcc-cccccccchhhcCCCCCCCEEEEecccccCHHHHHHHHHHhCCCCcEEEe
Confidence 44568889999999999977766544211 111122334445555444444444432210 0011100111223
Q ss_pred cCcchhHH-HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHH
Q 019086 256 SGVDEQLA-TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGA 333 (346)
Q Consensus 256 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA 333 (346)
.+.|...+ .+.+-+++++--.=+.+.+..|+| ..++||++. .++.+.++.+++|++++||||+. .||.-+
T Consensus 187 tn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P-~v~GKP~~~-------m~~~l~~~~~i~psRt~mvGDRL~TDIlFG 258 (306)
T KOG2882|consen 187 TNRDATTPPTPGVEIPGAGSFVAAVKFATGRQP-IVLGKPSTF-------MFEYLLEKFNIDPSRTCMVGDRLDTDILFG 258 (306)
T ss_pred ccCccccCCCCCeeccCCccHHHHHHHHhcCCC-eecCCCCHH-------HHHHHHHHcCCCcceEEEEcccchhhhhHh
Confidence 33333222 222445666666667788899999 566788777 27888999999999999999998 599999
Q ss_pred HHcCCCEEEecCC
Q 019086 334 QRIGMPCVVMRSR 346 (346)
Q Consensus 334 ~~aG~~~i~v~~~ 346 (346)
++.|+.|++|.++
T Consensus 259 ~~~G~~TLLvltG 271 (306)
T KOG2882|consen 259 KNCGFKTLLVLSG 271 (306)
T ss_pred hccCcceEEEecC
Confidence 9999999998764
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-08 Score=95.69 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||++|.+.+|...++
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence 59999999999999999999999999999999997665
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.69 E-value=6e-09 Score=94.52 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 151 ~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 151 GVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 38999999999999999999999999999999998765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=3e-08 Score=87.85 Aligned_cols=108 Identities=12% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-------------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 249 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-------------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~ 249 (346)
+++.||+.+.+..|++.|++++++||.+ +- .......++..|. .++.+.+.. .
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQs-Gi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cp-----------h 95 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQS-GIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCP-----------H 95 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCC-CccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECC-----------C
Confidence 3488999999999999999999999942 10 0112222223332 111111111 1
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 019086 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (346)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~D 329 (346)
..+.. -..|||.|.+ ++.++++.++++++.++|||...|
T Consensus 96 ~p~~~---------------------------c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~D 134 (181)
T COG0241 96 HPEDN---------------------------CDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTD 134 (181)
T ss_pred CCCCC---------------------------CcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHH
Confidence 11100 1456899988 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEecC
Q 019086 330 VAGAQRIGMPCVVMRS 345 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~ 345 (346)
+++|.++|+..+.+..
T Consensus 135 lq~a~n~gi~~~~~~~ 150 (181)
T COG0241 135 LQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHCCCCceEEEc
Confidence 9999999999776643
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.7e-07 Score=80.85 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=70.5
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++|++.+.|++.++.|+++.|.|. +.-....-.+ |-.+.-| ..++|+...+ ...|+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSS---GSV~AQkL~F---ghs~agd---------L~~lfsGyfD---ttiG~--- 159 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSS---GSVKAQKLFF---GHSDAGD---------LNSLFSGYFD---TTIGK--- 159 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcC---CCchhHHHhh---ccccccc---------HHhhhcceee---ccccc---
Confidence 367899999999999999999999998 4434332222 2211111 1112222111 11121
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
|-... .|..++...|++|.+++|+.|....+.+|+.+||.|+
T Consensus 160 ------------------------KrE~~--------------SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~ 201 (229)
T COG4229 160 ------------------------KRESQ--------------SYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATG 201 (229)
T ss_pred ------------------------cccch--------------hHHHHHHhcCCCchheEEecCCHHHHHHHHhcchhee
Confidence 11111 2999999999999999999999999999999999998
Q ss_pred Eec
Q 019086 342 VMR 344 (346)
Q Consensus 342 ~v~ 344 (346)
++.
T Consensus 202 l~~ 204 (229)
T COG4229 202 LAV 204 (229)
T ss_pred eee
Confidence 864
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.6e-06 Score=78.83 Aligned_cols=38 Identities=8% Similarity=-0.009 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 183 al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 183 AANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 38899999999999999999999999999999988764
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-06 Score=79.53 Aligned_cols=120 Identities=18% Similarity=0.308 Sum_probs=75.3
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhc-cCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS-AGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+-..++||+|-||+|.... .-+.+.++.. +...++.... .|..-.++...+.+++ +..+..
T Consensus 12 ~ril~~FDFD~TIid~dSD------~wVv~~lp~~------~l~~qL~~t~p~~~Wne~M~rv~k~Lh-eqgv~~----- 73 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD------NWVVDELPTT------DLFNQLRDTYPKGFWNELMDRVFKELH-EQGVRI----- 73 (256)
T ss_pred CcEEEEEecCceeecCCcc------hHHHHhcccc------hhHHHHHHhcccchHHHHHHHHHHHHH-HcCCCH-----
Confidence 3448999999999998775 2233444444 2223333221 1223333333444443 222211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCC-CEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi-~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
++.. ..+ ..++..||+.++|..++..|. .+.|+|. .....++.+++.+|+.++|.. |++
T Consensus 74 ------~~ik----~~~--r~iP~~Pgmv~lik~~ak~g~~eliIVSD---aNsfFIe~~Lea~~~~d~F~~-IfT 133 (256)
T KOG3120|consen 74 ------AEIK----QVL--RSIPIVPGMVRLIKSAAKLGCFELIIVSD---ANSFFIEEILEAAGIHDLFSE-IFT 133 (256)
T ss_pred ------HHHH----HHH--hcCCCCccHHHHHHHHHhCCCceEEEEec---CchhHHHHHHHHccHHHHHHH-Hhc
Confidence 1111 111 247799999999999999986 9999998 668999999999999998874 344
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.5e-08 Score=91.50 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||++|.+.+|...++
T Consensus 193 al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam 230 (264)
T COG0561 193 ALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM 230 (264)
T ss_pred HHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec
Confidence 48999999999999999999999999999999998765
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.61 E-value=3e-07 Score=80.67 Aligned_cols=55 Identities=33% Similarity=0.526 Sum_probs=45.3
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC-cccchhheecchhh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEE 239 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~e 239 (346)
...+.||.+++++.+++++++++|+|+ +.+.++..+++.++ -++.....+++++.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~ 126 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNND 126 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCc
Confidence 356999999999999999999999999 88999999999754 45555666666543
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.9e-07 Score=83.45 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=91.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc----chhh--------------eecchhhHHHhhhh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER----ISKI--------------KIVGNEEVERSLYG 246 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~----~f~~--------------~i~~~~e~~~~~f~ 246 (346)
..||..|.+..|+..+.+|-.+||........+...|.++|++- .|.- ..+--++...+.|+
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~ 103 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFD 103 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCC
Confidence 67999999999999999999999987766777777888888641 1100 00001122223455
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHH----H---------------------------------HHHHHHhhcccc
Q 019086 247 QFVLGKGISSGVDEQLATEARKAVSAQKQE----I---------------------------------AEEVASMLKLSV 289 (346)
Q Consensus 247 ~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~----~---------------------------------~~~~~~~~KP~p 289 (346)
+|-+. .++.--.+++.+.-+++..- + +.|-+... -..
T Consensus 104 gidTs-----~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~-~a~ 177 (262)
T KOG3040|consen 104 GIDTS-----DPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGC-EAT 177 (262)
T ss_pred CccCC-----CCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccccccCchHHHHHhhhccCc-eEE
Confidence 54221 11111111111111111110 0 11111111 122
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCCEEEecCC
Q 019086 290 DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 290 ~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~-Di~aA~~aG~~~i~v~~~ 346 (346)
.++||++.+ |+.+++.+|++|++|+||||-.+ |+-+|+++||+.|.|+++
T Consensus 178 vvGKP~~~f-------Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 178 VVGKPSPFF-------FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred EecCCCHHH-------HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 345666665 88999999999999999999885 999999999999999864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.7e-08 Score=89.25 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||++|.+.+|...++
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm 231 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM 231 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee
Confidence 59999999999999999999999999999999998765
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.3e-07 Score=84.47 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.+|++++++++|||+.||+.|++.+|+.+++
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~ 229 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM 229 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence 49999999999999999999999999999999998765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.3e-07 Score=83.95 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=35.6
Q ss_pred HHHHHHHHcCC---CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv---~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|+ ++++++.|||+.||++|.+.+|...++
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 59999999999 999999999999999999999988765
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.9e-08 Score=99.96 Aligned_cols=38 Identities=5% Similarity=0.016 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM 548 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL 548 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe
Confidence 49999999999999999999999999999999997665
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.9e-07 Score=93.32 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=70.0
Q ss_pred CCCCCcHHHHHHHHHhCCC-CEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi-~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|++|+++|+ +++++|| .....++.+++++|++++|...
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~---------------------------- 409 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAEL---------------------------- 409 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhcc----------------------------
Confidence 4589999999999999999 9999999 7789999999999998765431
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
.|. + -..++++++...++++||||+.+|+.++++||+..
T Consensus 410 ------------------------~p~---------~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 410 ------------------------LPE---------D-------KLEIVKELREKYGPVAMVGDGINDAPALAAADVGI 448 (536)
T ss_pred ------------------------CcH---------H-------HHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEE
Confidence 010 0 11245556666789999999999999999999743
|
. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.3e-07 Score=85.95 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=41.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
.||+.++|++|+++|++++|+|+ +.+..+...++.+|++.+|+..+.+
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvIIs~ 195 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDIIISG 195 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEEEEC
Confidence 38899999999999999999999 6678889999999999998764433
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.42 E-value=1e-06 Score=81.68 Aligned_cols=91 Identities=10% Similarity=0.176 Sum_probs=66.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHH--HHHHHhCccc-chhheecchhhHHHhhhhccccccccccCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR--SVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~--~~l~~lgl~~-~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~ 259 (346)
..++||+.++|++|+++|++++++||+. +.... ..++++|+.. .|+.. ++.++....
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~---~~~~~~~~~L~~~gl~~~~~~~I-i~s~~~~~~---------------- 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSP---RNIFSLHKTLKSLGINADLPEMI-ISSGEIAVQ---------------- 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCC---CChHHHHHHHHHCCCCccccceE-EccHHHHHH----------------
Confidence 4579999999999999999999999953 34433 6889999987 77764 333322110
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
.+..+++++++++++|++|||+..|+.....+|.
T Consensus 83 ---------------------------------------------~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 ---------------------------------------------MILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ---------------------------------------------HHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 1555566777888888888888777776655554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.6e-07 Score=92.31 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=68.9
Q ss_pred CCCCCcHHHHHHHHHhCC-CCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~G-i~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|+.|+++| ++++++|| .....++.+++++|++++|... .
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~--~------------------------- 432 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAEL--L------------------------- 432 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccC--C-------------------------
Confidence 568999999999999999 99999999 7789999999999998766431 0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
|+.++ ..+++++..+++|+||||+.+|+.++++||+.+.
T Consensus 433 ----------------------------------p~~K~-------~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 471 (556)
T TIGR01525 433 ----------------------------------PEDKL-------AIVKELQEEGGVVAMVGDGINDAPALAAADVGIA 471 (556)
T ss_pred ----------------------------------HHHHH-------HHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEE
Confidence 00001 1234444467899999999999999999996443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=9.4e-07 Score=81.25 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=32.3
Q ss_pred HHHHHHHHcCC--CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv--~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++..++.+++ .++++++|||+.||+.|.+.+|+..++
T Consensus 185 al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 185 AIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred HHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 37777888765 677999999999999999999998653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.6e-07 Score=80.73 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=75.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...+||+.+||++|.+. ++++|.|+ +.+.+++.+++.+++.. +|+..++... ....
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts---~~~~yA~~il~~ldp~~~~f~~~l~r~~---------------~~~~---- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTA---SLEEYADPVLDILDRGGKVISRRLYRES---------------CVFT---- 97 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcC---CcHHHHHHHHHHHCcCCCEEeEEEEccc---------------cEEe----
Confidence 44899999999999988 99999999 77899999999999875 6665443221 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
||. |...+..+|.++++||+|||+..++.++...|+.+.
T Consensus 98 ------------------------~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 ------------------------NGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ------------------------CCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 111 334577889999999999999999999999998865
Q ss_pred E
Q 019086 342 V 342 (346)
Q Consensus 342 ~ 342 (346)
.
T Consensus 137 ~ 137 (162)
T TIGR02251 137 S 137 (162)
T ss_pred C
Confidence 4
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.8e-06 Score=89.67 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=39.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.+++||+.++|++|+++|++++++|+ +....++.+++.+|++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN 445 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc
Confidence 45899999999999999999999999 7789999999999996
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.4e-05 Score=72.71 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++.+++.+|+++++|++|||+.||++|++.+|..++.+.+
T Consensus 171 al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 171 ALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 38999999999999999999999999999998877777654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.5e-05 Score=83.26 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEE--cCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~V--GDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++.++++.| ||+.||+.|.+.+|...++
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 5899999999999999998 9999999999999998765
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.1e-05 Score=72.20 Aligned_cols=38 Identities=16% Similarity=0.209 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCC--CCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~--p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++ .+++++|||+.||+.|.+.+|...++
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 388999999999 99999999999999999999988775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=9.3e-06 Score=88.13 Aligned_cols=89 Identities=11% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.+.|++|++.|++++++|+ .....++.+.+.+|+++++....
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~---------------------------- 697 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVL---------------------------- 697 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCC----------------------------
Confidence 36799999999999999999999999 67888999999999987543210
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
| +. -..++++++..+++++||||+.||+.++++||+...+
T Consensus 698 ------------------------p---------~~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 698 ------------------------P---------DG-------KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred ------------------------H---------HH-------HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 0 00 1124556677789999999999999999999995443
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.3e-06 Score=71.43 Aligned_cols=98 Identities=15% Similarity=0.214 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCch-----------hHHHHHHHHhCcccchhheecchhhHHHhhhhccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~-----------~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~ 253 (346)
..|++.+.|.+|.++|++|+|+||.+--.. ..+..+++.+++.-. .+++.. .
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~---~~~a~~-------------~- 92 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQ---VYAAPH-------------K- 92 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EE---EEECGC-------------S-
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceE---EEecCC-------------C-
Confidence 456899999999999999999999631111 223344444544411 011110 0
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCC---
Q 019086 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGS--- 326 (346)
Q Consensus 254 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg----v~p~e~i~VGDs--- 326 (346)
-..|||.+++ ++.+++.+. ++.++++||||.
T Consensus 93 ----------------------------d~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 93 ----------------------------DPCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------------------STTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------------------CCCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 0356999999 888888876 488999999996
Q ss_pred --------hhhHHHHHHcCCCEE
Q 019086 327 --------QSGVAGAQRIGMPCV 341 (346)
Q Consensus 327 --------~~Di~aA~~aG~~~i 341 (346)
..|..-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 579999999999853
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.3e-06 Score=77.39 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=42.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.|++.++|++|+++|++++|+|| +.+..+...++.+|+..+|+..+.++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTN---g~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSY---GNREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHHcCCCccccEEEECC
Confidence 37888999999999999999999 66788999999999999998754444
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.6e-05 Score=69.64 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=36.1
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
...++.|++.++++.|+++|++|.++|+.....+.....-|...|+..
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~ 164 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG 164 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC
Confidence 346799999999999999999999999943222233555666777764
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.05 E-value=4.8e-05 Score=71.21 Aligned_cols=115 Identities=17% Similarity=0.270 Sum_probs=76.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--c-hhh-------eecchhhHHHhhhhccccccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--I-SKI-------KIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~-f~~-------~i~~~~e~~~~~f~~i~~g~~ 253 (346)
...+.+.++|..|.++|++|..+|..+.+.+......|..+|++- . +.. ...........++.++....+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 367899999999999999999999977666677777778888861 1 100 001111112222333333333
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH-
Q 019086 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG- 332 (346)
Q Consensus 254 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~a- 332 (346)
..+| .++...++++|..|+.+|||+|+..++..
T Consensus 161 ~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 161 QDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLKSV 194 (252)
T ss_pred CccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHHHH
Confidence 3222 13899999999999999999999876654
Q ss_pred ---HHHcCCCEEEec
Q 019086 333 ---AQRIGMPCVVMR 344 (346)
Q Consensus 333 ---A~~aG~~~i~v~ 344 (346)
.+..|+..+++.
T Consensus 195 ~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 195 EKACKKSGIDFIGFH 209 (252)
T ss_pred HHHHhhCCCcEEEEE
Confidence 345677766653
|
The function is not known. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.1e-05 Score=74.42 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=37.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
.++.||+.+|+..++++|++|.++||.....+.....-|.+.|...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG 159 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence 4689999999999999999999999965554566666777888653
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.3e-05 Score=78.45 Aligned_cols=40 Identities=15% Similarity=-0.034 Sum_probs=35.0
Q ss_pred HHHHHHHHc---CCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 305 ALRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 305 ~~~~~~e~l---gv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
|++.+++++ |+++++++++||+.||++|.+.+|...|.+.
T Consensus 179 Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~ 221 (413)
T PLN02382 179 ALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS 221 (413)
T ss_pred HHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc
Confidence 488889998 9999999999999999999999996555544
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=2e-05 Score=67.67 Aligned_cols=81 Identities=12% Similarity=0.198 Sum_probs=67.1
Q ss_pred HHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhH
Q 019086 193 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 272 (346)
Q Consensus 193 L~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~ 272 (346)
|..|.+.|++++|+|+ .....++...+.||+..++-.. .+
T Consensus 44 ik~l~~~Gi~vAIITG---r~s~ive~Ra~~LGI~~~~qG~----~d--------------------------------- 83 (170)
T COG1778 44 IKLLLKSGIKVAIITG---RDSPIVEKRAKDLGIKHLYQGI----SD--------------------------------- 83 (170)
T ss_pred HHHHHHcCCeEEEEeC---CCCHHHHHHHHHcCCceeeech----Hh---------------------------------
Confidence 4577888999999999 5678999999999999754221 00
Q ss_pred HHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 273 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 273 ~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..++|+..++++++.++||.+|||-.+|+.+.+.+|++...
T Consensus 84 -----------------------------K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~ 124 (170)
T COG1778 84 -----------------------------KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV 124 (170)
T ss_pred -----------------------------HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence 11259999999999999999999999999999999998653
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00074 Score=69.11 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=63.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchh-hH-HHhhhhccccccccccCcchh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~-e~-~~~~f~~i~~g~~v~~~~~~~ 261 (346)
++|.+.+. ++++|. ++|+|. +++.+++.+.+. +|++.. ++.+ ++ ..++|++.+.|.+...|
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~G---- 174 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVG---- 174 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCcc----
Confidence 55665554 456774 499999 778999999975 899863 3332 22 24455555554322222
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+| ...+.+.+|.+... ++.|||.+|..+.+.++-..+
T Consensus 175 ----------e~K-------------------------------v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 175 ----------DHK-------------------------------RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred ----------HHH-------------------------------HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 111 23333556644344 899999999999999997765
Q ss_pred E
Q 019086 342 V 342 (346)
Q Consensus 342 ~ 342 (346)
+
T Consensus 213 V 213 (497)
T PLN02177 213 V 213 (497)
T ss_pred e
Confidence 5
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=5e-05 Score=81.40 Aligned_cols=42 Identities=24% Similarity=0.354 Sum_probs=39.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++||+.+.|++|++.|++++++|+ .....++.+.+.+|++.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~ 609 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDF 609 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCe
Confidence 6899999999999999999999999 77899999999999974
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=97.79 E-value=5.5e-05 Score=67.52 Aligned_cols=29 Identities=21% Similarity=0.427 Sum_probs=22.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYG 210 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~ 210 (346)
.+++.||+.|.|++|.+.|..++++|...
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~ 99 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARP 99 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence 46799999999999999998888888743
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00034 Score=60.80 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=29.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 223 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~ 223 (346)
..|++.++++.++++|++++++|+...+.....+..++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 468999999999999999999999543222233456655
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.74 E-value=7e-05 Score=81.85 Aligned_cols=114 Identities=22% Similarity=0.307 Sum_probs=73.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
+++||+.+.|+.|+++|++++++|+ .....+..+.+.+|+...++.. +++.+.. .-.++.+.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~~-v~g~~l~--------------~~~~~~l~ 589 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQS-VSGEKLD--------------AMDDQQLS 589 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCce-eEhHHhH--------------hCCHHHHH
Confidence 6799999999999999999999999 7789999999999998654432 2222211 11111100
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+. +-..-....+|+.+-.+ .+.++-..+.+.|+||+.||+.|.++|++...
T Consensus 590 ------------~~~-------~~~~Vfar~~P~~K~~i-------v~~lq~~g~~v~mvGDGvND~pAl~~AdVGia 641 (884)
T TIGR01522 590 ------------QIV-------PKVAVFARASPEHKMKI-------VKALQKRGDVVAMTGDGVNDAPALKLADIGVA 641 (884)
T ss_pred ------------HHh-------hcCeEEEECCHHHHHHH-------HHHHHHCCCEEEEECCCcccHHHHHhCCeeEe
Confidence 000 00111122333333333 23333335889999999999999999997544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00011 Score=69.95 Aligned_cols=37 Identities=11% Similarity=-0.018 Sum_probs=27.5
Q ss_pred HHHHHHHcCC--CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv--~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.+...+.+.- .+=.+|.+|||.||+.|.+.+....|+
T Consensus 213 ~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 213 VQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred HHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 4444444433 344799999999999999999988775
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00013 Score=61.00 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=44.1
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
.+.++|.+++++.++|+.|+-+..+|= |...-+-..+..+++..||+..+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 366999999999999999998888886 77888888999999999998864
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00048 Score=64.80 Aligned_cols=48 Identities=19% Similarity=0.255 Sum_probs=35.1
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
...++.|++.+|.+.++++|++|.++||.....+.....-|.+.|+..
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 456789999999999999999999999953322333444455566653
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00014 Score=76.77 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=40.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++||+.+.+++|++.|++++++|+ .....+..+.+.+|+++++
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~ 489 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFI 489 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEE
Confidence 6899999999999999999999999 7789999999999998643
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00034 Score=74.24 Aligned_cols=45 Identities=24% Similarity=0.489 Sum_probs=41.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
-+++|++.+.|++|++.|++++++|+ ..+..++.+.+.+|+++++
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~ 580 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVR 580 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhhe
Confidence 45899999999999999999999999 7789999999999998754
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0058 Score=55.85 Aligned_cols=103 Identities=11% Similarity=0.188 Sum_probs=71.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
...++++...++..+++|+++.|.|. +.......+..+-+-.+. .+-..++|+--+ |.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSS---gsv~AqKllfg~s~~gdl--------~~y~~gyfDt~i-G~---------- 179 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSS---GSVAAQKLLFGYSDAGDL--------RKYISGYFDTTI-GL---------- 179 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcC---CcHHHHHHHHcccCcchH--------HHHhhhhhhccc-cc----------
Confidence 36799999999999999999999998 544444444433221111 112222333311 11
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|-.-. .|..+.+.+|.++.|.+|+-|-..-..+|+.+|+.+.+
T Consensus 180 -----------------------K~e~~--------------sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l 222 (254)
T KOG2630|consen 180 -----------------------KVESQ--------------SYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGL 222 (254)
T ss_pred -----------------------eehhH--------------HHHHHHHHhCCChhheEEeccChHHHHHHHhcccceee
Confidence 11112 29999999999999999999999999999999999877
Q ss_pred ec
Q 019086 343 MR 344 (346)
Q Consensus 343 v~ 344 (346)
+.
T Consensus 223 ~~ 224 (254)
T KOG2630|consen 223 VS 224 (254)
T ss_pred ee
Confidence 54
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00033 Score=74.11 Aligned_cols=44 Identities=16% Similarity=0.334 Sum_probs=40.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++||+.+.+++||+.|+++.++|+ .....+..+.+.+|++++|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~ 484 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFV 484 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEE
Confidence 5899999999999999999999999 7788999999999998754
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00039 Score=73.64 Aligned_cols=44 Identities=16% Similarity=0.363 Sum_probs=40.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++||+.+.+++||+.|++++++|+ .....+..+.+.+|+++++
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~ 488 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFL 488 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEE
Confidence 4689999999999999999999999 7788999999999998743
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0015 Score=61.47 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=30.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.+|+..+++++|||..+|+.|.+.+
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHH
Confidence 48999999999999999999999999999988
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00061 Score=74.84 Aligned_cols=42 Identities=26% Similarity=0.523 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFS 578 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999 66788999999999963
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0005 Score=69.39 Aligned_cols=128 Identities=10% Similarity=0.068 Sum_probs=72.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh-C--------cccchhheecchhhHHHhhhhccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G--------SERISKIKIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l-g--------l~~~f~~~i~~~~e~~~~~f~~i~~g~~ 253 (346)
+...|.+..+|+.||++|.++-++|| ++-.++..+++.+ | +.++||++|+..... ++|..-..=..
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTN---S~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP--~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITN---SPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP--GFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-S---S-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC--HHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecC---CCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC--cccCCCCceEE
Confidence 34568999999999999999999999 5668888888853 3 457888887765422 23432110011
Q ss_pred c--ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcccc--ccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-h
Q 019086 254 I--SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSV--DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-S 328 (346)
Q Consensus 254 v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p--~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~ 328 (346)
| ..|.. +... .-.++......+= .....+.+|....++++|||+. .
T Consensus 257 vd~~~g~l--------------------------~~~~~~~~l~~g~vY~gGn---~~~l~~ll~~~g~~VLY~GDhi~~ 307 (448)
T PF05761_consen 257 VDTETGKL--------------------------KWGKYVGPLEKGKVYSGGN---WDQLHKLLGWRGKEVLYFGDHIYG 307 (448)
T ss_dssp EETTTSSE--------------------------ECS---SS--TC-EEEE-----HHHHHHHCT--GGGEEEEESSTTT
T ss_pred EECCCCcc--------------------------ccccccccccCCCEeecCC---HHHHHHHHccCCCeEEEECCchhh
Confidence 1 01100 0000 0001111112222 5677788999999999999998 7
Q ss_pred hHHHHHHc-CCCEEEec
Q 019086 329 GVAGAQRI-GMPCVVMR 344 (346)
Q Consensus 329 Di~aA~~a-G~~~i~v~ 344 (346)
||...+.. ||+|+.|-
T Consensus 308 Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 308 DILKSKKRHGWRTAAII 324 (448)
T ss_dssp THHHHHHHH-SEEEEE-
T ss_pred hhhhhccccceEEEEEe
Confidence 98877777 99998873
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00062 Score=59.16 Aligned_cols=51 Identities=18% Similarity=0.284 Sum_probs=43.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGN 237 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~ 237 (346)
..++||+.++|+.|++. ++++|+|+ +.+.++..+++.+++.. +|...+++.
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~---~~~~yA~~vl~~ldp~~~~F~~ri~~r 108 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTM---GTRAYAQAIAKLIDPDGKYFGDRIISR 108 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeC---CcHHHHHHHHHHhCcCCCeeccEEEEe
Confidence 55899999999999965 99999999 77899999999999984 774445443
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0035 Score=50.32 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=34.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
++.||+.++|+.|+++|++++++||.+..........+..+|+.-
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 478999999999999999999999966444455666678889873
|
... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0041 Score=52.12 Aligned_cols=92 Identities=8% Similarity=0.130 Sum_probs=66.3
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.-++++.+.+.|++|++. +.|.|.|+ .-.-.+....+..|+...- ++...+
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASg---Dr~gsl~~lae~~gi~~~r---v~a~a~---------------------- 78 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASG---DRKGSLVQLAEFVGIPVER---VFAGAD---------------------- 78 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecC---CcchHHHHHHHHcCCceee---eecccC----------------------
Confidence 345899999999999999 99999998 4455677778888875321 111000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
++- =..+++.|+-+.+-|+||||+.||+.+.++|.+...
T Consensus 79 ----------------------------------~e~-------K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~ 117 (152)
T COG4087 79 ----------------------------------PEM-------KAKIIRELKKRYEKVVMVGNGANDILALREADLGIC 117 (152)
T ss_pred ----------------------------------HHH-------HHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceE
Confidence 010 234567777777999999999999999999987754
Q ss_pred Ee
Q 019086 342 VM 343 (346)
Q Consensus 342 ~v 343 (346)
.+
T Consensus 118 ti 119 (152)
T COG4087 118 TI 119 (152)
T ss_pred Ee
Confidence 43
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0025 Score=70.05 Aligned_cols=118 Identities=17% Similarity=0.223 Sum_probs=74.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchh-heecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~-~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
-+|+|++.+.|+.|+++|+++.++|+ .+...+..+...+|+..--. ..++.+.+. ..-.++.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el--------------~~l~~~e 608 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAEL--------------DALSDEE 608 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHh--------------hhcCHHH
Confidence 56999999999999999999999999 77899999999999864321 112222221 1111111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+.... . +-+ -+..=+|+.+..+ -.++++. ..-+.|.||+.||+.|.++|.+...
T Consensus 609 l~~~~----------------~--~~~-VfARvsP~qK~~I----V~~lq~~---g~vVamtGDGvNDapALk~ADVGIa 662 (917)
T COG0474 609 LAELV----------------E--ELS-VFARVSPEQKARI----VEALQKS---GHVVAMTGDGVNDAPALKAADVGIA 662 (917)
T ss_pred HHHHh----------------h--hCc-EEEEcCHHHHHHH----HHHHHhC---CCEEEEeCCCchhHHHHHhcCccEE
Confidence 00000 0 000 1112223333333 3334444 4679999999999999999998875
Q ss_pred Ee
Q 019086 342 VM 343 (346)
Q Consensus 342 ~v 343 (346)
+.
T Consensus 663 mg 664 (917)
T COG0474 663 MG 664 (917)
T ss_pred ec
Confidence 54
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.011 Score=51.45 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=32.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l 224 (346)
.+||+.++...+.++|+++.-+|+.........+..+..+
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 6789999999999999999999996544455666666665
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.003 Score=69.11 Aligned_cols=41 Identities=17% Similarity=0.463 Sum_probs=38.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGID 555 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 5789999999999999999999999 7788899999999996
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0086 Score=52.81 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=23.6
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
.--|+.|||-+||.+|+.+|.+.|.+.
T Consensus 185 ~~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 185 NIRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CceEEecCCchhhhHHHhcCccceeEE
Confidence 337999999999999999999988753
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0041 Score=68.26 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=38.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLD 590 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 5789999999999999999999999 7788999999999995
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0044 Score=68.06 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=38.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 6889999999999999999999999 7788899999999996
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0041 Score=67.06 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=39.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999 77889999999999964
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.012 Score=54.31 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=32.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-hhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~~ 228 (346)
..+.||+.||+.+.-++|.+|..+||..... ......=|.++|+..
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~ 167 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ 167 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence 5588999999999999999999999953221 112333344566664
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0039 Score=68.76 Aligned_cols=42 Identities=29% Similarity=0.512 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILT 620 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCC
Confidence 6889999999999999999999999 77888999999999963
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0049 Score=68.66 Aligned_cols=42 Identities=21% Similarity=0.310 Sum_probs=38.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+++|++.+.|+.|+++|++++++|+ .....+..+...+|+.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGII 686 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 7788899999999995
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0029 Score=56.49 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.++++++++++++++|||+.+|+.|++.+|+..++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 167 ALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 38999999999999999999999999999999998763
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0029 Score=57.17 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am 227 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM 227 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE
Confidence 58999999999999999999999999999999998665
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.003 Score=57.96 Aligned_cols=38 Identities=18% Similarity=0.120 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 163 al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 163 ALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 38999999999999999999999999999999976653
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.01 Score=63.63 Aligned_cols=43 Identities=30% Similarity=0.483 Sum_probs=39.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
-+++|++...+..|++.|++++++|+ ..+..++.+.+.+|++.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~ 764 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDN 764 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcce
Confidence 45899999999999999999999999 77899999999999765
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.035 Score=52.46 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=38.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKI 232 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~ 232 (346)
...++||+.++|+.|+++|++++++||++....+.....+.. ++++--.+.
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~ 73 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD 73 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH
Confidence 356899999999999999999999999765555545566666 555443343
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.13 Score=47.33 Aligned_cols=130 Identities=20% Similarity=0.214 Sum_probs=71.0
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--c------hhheecchhhH--HHhhhhcc--c
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--I------SKIKIVGNEEV--ERSLYGQF--V 249 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~------f~~~i~~~~e~--~~~~f~~i--~ 249 (346)
.+++.||+.+.+..|.+.=-++++ |. +...+++.+...+|+.. . +|..-+..++- ....|+.+ .
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~-ST---SY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~ 156 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVI-ST---SYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASL 156 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEE-ec---cHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccc
Confidence 367999999999999887445544 54 45788999999998831 1 12111222111 11122211 2
Q ss_pred cccccccCcchhHH----HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 250 LGKGISSGVDEQLA----TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 250 ~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
.|+..-...|+... .|.+|.+++=|... -+ .+.++ ++..++--+.+.+ +++|||
T Consensus 157 ~geelfe~lDe~F~rLip~E~gki~~~vk~VG-------------gg-----~ka~i---~e~~~ele~~d~s-a~~VGD 214 (315)
T COG4030 157 SGEELFEKLDELFSRLIPSEVGKIVESVKAVG-------------GG-----EKAKI---MEGYCELEGIDFS-AVVVGD 214 (315)
T ss_pred cHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-------------Cc-----chhHH---HHHHHhhcCCCcc-eeEecC
Confidence 23333333344332 35555554433211 00 01111 4555555555544 999999
Q ss_pred ChhhHHHHHHcC
Q 019086 326 SQSGVAGAQRIG 337 (346)
Q Consensus 326 s~~Di~aA~~aG 337 (346)
|..|++|.+.+.
T Consensus 215 SItDv~ml~~~r 226 (315)
T COG4030 215 SITDVKMLEAAR 226 (315)
T ss_pred cccchHHHHHhh
Confidence 999999988764
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.022 Score=63.37 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=37.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|+++|++++++|+ .....+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 6799999999999999999999999 6678889999999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.052 Score=55.25 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=36.2
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchh-hHH-Hhhhhcccccc
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EVE-RSLYGQFVLGK 252 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~-e~~-~~~f~~i~~g~ 252 (346)
.++..+..| +++|+|. +++-.++..++. +|.+.. ++.+ +.. .++|++.+.|.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~V-----vGTEL~v~~~G~~TG~~~G~ 155 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADEV-----IGSELVVNRFGFATGFIRGT 155 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCceE-----EeeeEEEeeccEEEEEEecC
Confidence 556778888 9999999 788999999987 888863 3322 222 24566655543
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.037 Score=55.37 Aligned_cols=101 Identities=11% Similarity=0.111 Sum_probs=74.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
+-+.....++.+++.++|.+|+++|..- -+...++.++...|.+-.--....+++....
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nipiY~S~e~rl~-------------------- 156 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIPIYMSSEFRLK-------------------- 156 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCceeeecceeehh--------------------
Confidence 4455567799999999999999999854 3467788888888887433222233322111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
|-+-.+ |.++++.-+++|.+-+++||.. .|+.+++..|+.|.
T Consensus 157 -----------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 -----------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred -----------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 222222 8999999999999999999987 69999999999864
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.035 Score=62.12 Aligned_cols=41 Identities=20% Similarity=0.376 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|+.|+++|+++.++|+ .....+..+...+|+-
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 5899999999999999999999999 7778899999999994
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.069 Score=50.47 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=32.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.||+.++|+.|+++|++++++||............+..+|+..
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 67899999999999999999999943222333335667788764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.059 Score=55.20 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl 226 (346)
+++|++.+.++.|++.|+++.++|+ .....+..+.+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 777888899998886
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.024 Score=51.15 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 189 v~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
..+.|++|+++|++++++|+ .....+..++..+++.
T Consensus 20 ~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 20 TIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGID 55 (254)
T ss_dssp HHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHC
T ss_pred HHHHHHhhcccceEEEEEcc---Ccccccccccccccch
Confidence 34666788889999999999 4456677888888876
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.11 Score=56.68 Aligned_cols=32 Identities=9% Similarity=-0.122 Sum_probs=27.2
Q ss_pred HHHHH---HHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 306 LRAGA---EYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 306 ~~~~~---e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
++.++ +.+|..++++++|||..+|..|.+.++
T Consensus 767 l~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 767 AKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 55554 457999999999999999999999886
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.05 Score=60.89 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=37.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+++||+.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCC
Confidence 35899999999999999999999999 6678888888888874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.067 Score=57.18 Aligned_cols=43 Identities=26% Similarity=0.465 Sum_probs=39.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
-+|+|++.+.++.|++.|++|.++|+ .....+..+...+|+-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~ 625 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFS 625 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCc
Confidence 46899999999999999999999999 77888999999999753
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.02 Score=53.33 Aligned_cols=40 Identities=23% Similarity=0.115 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++.+++++++++++++++|||.||+.|. ..+...|+|.+
T Consensus 169 Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 169 ALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp HHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 59999999999999999999999999999 77778888765
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.031 Score=51.77 Aligned_cols=39 Identities=5% Similarity=-0.082 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc-------CCCEEEe
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVM 343 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a-------G~~~i~v 343 (346)
+++.++++++..++++++|||+.+|+.|++.+ |..+|.|
T Consensus 171 a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v 216 (244)
T TIGR00685 171 IVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI 216 (244)
T ss_pred HHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE
Confidence 38899999999999999999999999999999 6667666
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.092 Score=58.51 Aligned_cols=44 Identities=23% Similarity=0.260 Sum_probs=35.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+-++..||.|.|+.|+++|+|+.++|+ .-.+.+-.+.-..++.+
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~Ll~ 692 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRLLR 692 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcCCC
Confidence 356889999999999999999999999 55666666766666653
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.1 Score=49.39 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=41.0
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.|.+.+.|.+|++.|.-+++=|. |.++.+..-++.+++.++|+..+.++
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEeCC
Confidence 34556777899999999988888 77899999999999999999866554
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.27 Score=55.58 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=35.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-++++|+.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKLL 766 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCCC
Confidence 36899999999999999999999999 5667777777777763
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.036 Score=51.44 Aligned_cols=37 Identities=5% Similarity=-0.046 Sum_probs=31.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~~ 345 (346)
|++.+++. ++++++||| +.||++|.+.+|...+.|.+
T Consensus 192 al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 192 CLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred HHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 47777777 599999999 89999999998888777653
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.35 Score=46.55 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=21.1
Q ss_pred cCCCCCCCCCCCCCCCCCCCceEEEEeccCccccccc
Q 019086 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYR 100 (346)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~k~viFDlDGTL~d~~~ 100 (346)
.++++.+|...+ ..+++. .-++.||+||||+....
T Consensus 17 r~~~~kf~~~~s-~~ss~~-~fgfafDIDGVL~RG~~ 51 (389)
T KOG1618|consen 17 RPPMRKFISEIS-FESSPP-TFGFAFDIDGVLFRGHR 51 (389)
T ss_pred CCchhhhhcccC-CCCCCC-ceeEEEecccEEEecCC
Confidence 355555554433 223333 33999999999987443
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.38 Score=42.16 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=24.4
Q ss_pred HHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 310 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
.+...+ -+|++|+. |-++.|+.+|++.+.+-+
T Consensus 130 vrth~i----dlf~ed~~~na~~iAk~~~~~vilins 162 (194)
T COG5663 130 VRTHNI----DLFFEDSHDNAGQIAKNAGIPVILINS 162 (194)
T ss_pred hHhhcc----CccccccCchHHHHHHhcCCcEEEecC
Confidence 444544 46899986 778888999999998754
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.43 Score=41.27 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=28.5
Q ss_pred CCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 315 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 315 v~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
..++|.+||||.. .||.+|...|-..||++.
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~ 168 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEP 168 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecc
Confidence 5789999999997 899999999999999875
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.4 Score=44.59 Aligned_cols=50 Identities=14% Similarity=0.212 Sum_probs=37.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
+.|++.++|++|+++|++++++||............++.+|++...+..+
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 56799999999999999999999843233455677788899875444433
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.2 Score=40.10 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=21.6
Q ss_pred EEEeccCccccccc-cccHHHHHHHHHHcCCCC
Q 019086 87 VLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDC 118 (346)
Q Consensus 87 viFDlDGTL~d~~~-~~~~~a~~~~~~~~gi~~ 118 (346)
++||+||||++... +.-...+.+.+++.|.+.
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~ 33 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPV 33 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCE
Confidence 68999999998443 223345566677778763
|
... |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.068 Score=45.85 Aligned_cols=48 Identities=19% Similarity=0.527 Sum_probs=37.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc-ccchhhee
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 234 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl-~~~f~~~i 234 (346)
..++||+.+||+.|.+. +.++|.|. +...+++.+++.+.. ..+|+..+
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~---~~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTS---ASEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-S---S-HHHHHHHHHHHTTTTSSEEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEe---ehhhhhhHHHHhhhhhcccccccc
Confidence 44799999999999665 99999999 778999999999998 45665543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.57 Score=43.69 Aligned_cols=43 Identities=23% Similarity=0.505 Sum_probs=33.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.||+.++|+.|+++|++++++||............+..+|++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 6899999999999999999999996543334455556667875
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.66 Score=43.30 Aligned_cols=57 Identities=30% Similarity=0.514 Sum_probs=39.2
Q ss_pred HHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 177 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 177 ~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.+......+++|+.++++.|+++++++.|+|+ +--..++.++++.|... -++.|+|+
T Consensus 83 ~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~~~-~Nv~VvSN 139 (246)
T PF05822_consen 83 AVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGVFH-PNVKVVSN 139 (246)
T ss_dssp HHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT--B-TTEEEEEE
T ss_pred HHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCCCC-CCeEEEee
Confidence 33345688999999999999999999999999 77899999999875432 24446664
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.17 Score=51.52 Aligned_cols=43 Identities=16% Similarity=0.394 Sum_probs=38.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
..||++|-.++||+-|++++.+|+ ...-.+..+....|++++.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfi 490 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFI 490 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhh
Confidence 469999999999999999999999 5667788888999999864
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.13 Score=47.90 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=30.0
Q ss_pred HHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEecC
Q 019086 310 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~~ 345 (346)
++.+. +++++++||| +.||++|.+.-|..++-|++
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 33444 9999999999 79999999999999998875
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.25 Score=48.08 Aligned_cols=129 Identities=14% Similarity=0.081 Sum_probs=72.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hC--cccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LG--SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lg--l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
-.|....+++.|+++|.++-++||+ +-..+...+.. .| +.++||++|+-.+.. ++|+.-.-..- .-|+
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNS---PysFVd~GM~flvG~~WRdlFDVVIvqA~KP--~Fftde~rPfR---~~de- 311 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNS---PYSFVDKGMRFLVGDDWRDLFDVVIVQANKP--EFFTDERRPFR---KYDE- 311 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCC---chhhhhcCceeeeCccHHhhhheeEEecCCC--cccccccCcch---hhcc-
Confidence 4578889999999999999999994 44444444443 23 347888876554322 12322110000 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHH-HcCCC
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-RIGMP 339 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~-~aG~~ 339 (346)
| ++ ...|-..-|.+++ +-...+- +...++--|....+++++||+. +|+.... ..||+
T Consensus 312 ------k-----~~--sl~wdkv~klekg-----kiYy~G~---l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWR 370 (510)
T KOG2470|consen 312 ------K-----RG--SLLWDKVDKLEKG-----KIYYQGN---LKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWR 370 (510)
T ss_pred ------c-----cc--chhhhhhhhcccC-----ceeeecc---HHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccc
Confidence 0 00 0001111111111 0111111 4566677788899999999997 8998877 89998
Q ss_pred EEEe
Q 019086 340 CVVM 343 (346)
Q Consensus 340 ~i~v 343 (346)
|-.|
T Consensus 371 TgAI 374 (510)
T KOG2470|consen 371 TGAI 374 (510)
T ss_pred cccc
Confidence 7543
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.23 Score=43.04 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=40.9
Q ss_pred CCceEEEEeccCcccccccc-----ccHHHH-------HHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhC
Q 019086 82 PRDLAVLLEVDGVLVDAYRF-----GNRQAF-------NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIG 149 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~-----~~~~a~-------~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 149 (346)
..+|.+|||+||||.|..-+ ....+| .+++.+.|+. ..+.+|+...+.+...+.+|
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~------------vAIITGr~s~ive~Ra~~LG 73 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIK------------VAIITGRDSPIVEKRAKDLG 73 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCe------------EEEEeCCCCHHHHHHHHHcC
Confidence 46889999999999984321 011222 3566777777 23556777778778888888
Q ss_pred CCCCC
Q 019086 150 WPTSV 154 (346)
Q Consensus 150 ~~~~~ 154 (346)
+..-+
T Consensus 74 I~~~~ 78 (170)
T COG1778 74 IKHLY 78 (170)
T ss_pred Cceee
Confidence 76443
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.3 Score=44.75 Aligned_cols=22 Identities=0% Similarity=-0.094 Sum_probs=16.6
Q ss_pred CCCc-EEEEcCChhhHHHHHHcC
Q 019086 316 PVRN-CFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 316 ~p~e-~i~VGDs~~Di~aA~~aG 337 (346)
...+ ++.+||+.||+.+.....
T Consensus 207 ~~~r~t~~~GDg~nD~Pl~ev~d 229 (274)
T COG3769 207 GGARTTLGLGDGPNDAPLLEVMD 229 (274)
T ss_pred CceeEEEecCCCCCcccHHHhhh
Confidence 3444 888999999998876543
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=91.47 E-value=0.4 Score=44.84 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=35.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.||+.++|+.|+++|++++++||............++.+|++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6889999999999999999999995433334566777888986
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.77 Score=48.02 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=30.1
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
||..|-..++++|+++..||....+.....+..|..+..+.
T Consensus 562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG 602 (738)
T KOG2116|consen 562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDG 602 (738)
T ss_pred hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcC
Confidence 56666678889999999999866666666777777666553
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.82 Score=41.22 Aligned_cols=39 Identities=21% Similarity=0.451 Sum_probs=35.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.+|++.+||+.+.+ .+.|+|-|. +...++..+++.+|+.
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTA---a~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSA---TSMKWIEIKMTELGVL 84 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEec---CCHHHHHHHHHHhccc
Confidence 68999999999999 599999999 6689999999998874
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.32 Score=40.43 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=13.3
Q ss_pred eEEEEeccCcccccc
Q 019086 85 LAVLLEVDGVLVDAY 99 (346)
Q Consensus 85 k~viFDlDGTL~d~~ 99 (346)
|+++||+||||++..
T Consensus 1 kli~~DlD~Tl~~~~ 15 (128)
T TIGR01681 1 KVIVFDLDNTLWTGE 15 (128)
T ss_pred CEEEEeCCCCCCCCC
Confidence 589999999999874
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=90.02 E-value=3.5 Score=37.91 Aligned_cols=49 Identities=18% Similarity=0.305 Sum_probs=34.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCch-hHHHHHHHHhCcccchhh
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-RIARSVVEKLGSERISKI 232 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~-~~~~~~l~~lgl~~~f~~ 232 (346)
.++|++.++|..++++|+++.++||...... ...+.+.+.+|+.--.+.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~ 63 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQ 63 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 3688999999999999999999999652223 333344443787643333
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.79 E-value=1.9 Score=40.71 Aligned_cols=32 Identities=3% Similarity=-0.105 Sum_probs=24.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
++.++++++....-.++.||-..|=.+.+.+.
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 77778888777667999999987766666555
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=89.64 E-value=0.63 Score=45.91 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=19.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
++|.+..=|..+.+.|+.++|.||.
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecc
Confidence 4555556677888889999999985
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=89.39 E-value=0.2 Score=41.94 Aligned_cols=25 Identities=8% Similarity=0.041 Sum_probs=20.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
+.+++.+.|.+++++|+.++++|+.
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR 49 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSR 49 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5566778888888899999999984
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=88.99 E-value=0.44 Score=44.12 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=24.2
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHH---HHcCCC
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLD 117 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~---~~~gi~ 117 (346)
.|++|.|+|||||||++.... ..+...+++ ++.|+.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~ 40 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFK 40 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCE
Confidence 367899999999999987653 223334443 445765
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.70 E-value=1.8 Score=46.83 Aligned_cols=42 Identities=26% Similarity=0.442 Sum_probs=38.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+.+||+.+.++.|+.+|++|-.+|+ +.-..++.+...+|+.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHcccc
Confidence 45799999999999999999999999 6678899999999985
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=88.68 E-value=0.47 Score=44.03 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=19.8
Q ss_pred CCceEEE-EeccCccccccccccHHHHHHHHHH
Q 019086 82 PRDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (346)
Q Consensus 82 ~~~k~vi-FDlDGTL~d~~~~~~~~a~~~~~~~ 113 (346)
.+++.++ |||||||++.... ..+...+++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred CccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 3566666 9999999987653 22344444444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=86.92 E-value=1.1 Score=48.22 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=26.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
+++.+++ +++++.++++||+.||+.|.+.++
T Consensus 661 al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~ 691 (726)
T PRK14501 661 AVRRLLE--AGPYDFVLAIGDDTTDEDMFRALP 691 (726)
T ss_pred HHHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence 3666666 788899999999999999999974
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.32 E-value=1.6 Score=43.16 Aligned_cols=32 Identities=13% Similarity=-0.099 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCCC---CcEEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPV---RNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p---~e~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.+|... .-.|||||-..|-.|.+.+
T Consensus 287 Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 287 ALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321 (366)
T ss_pred HHHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence 5888899988753 3489999999888777766
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.63 E-value=3 Score=41.94 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=27.7
Q ss_pred HHHHHHHHcCCCCCcEE-EEcCChhhHHHHHHcCCC
Q 019086 305 ALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i-~VGDs~~Di~aA~~aG~~ 339 (346)
||..-++.++.++..-+ -+|....|+.+=+.+|++
T Consensus 481 ayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 481 AYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 57777777877776544 688999999999888887
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.39 E-value=0.44 Score=42.13 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.5
Q ss_pred CceEEEEeccCccccc
Q 019086 83 RDLAVLLEVDGVLVDA 98 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~ 98 (346)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999985
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.19 E-value=5.9 Score=42.20 Aligned_cols=27 Identities=26% Similarity=0.363 Sum_probs=24.3
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTA 208 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn 208 (346)
.-++..+++-.|+.||++|++|..+|+
T Consensus 656 EDkLQ~dVk~tLElLRNAgikiWMLTG 682 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELLRNAGIKIWMLTG 682 (1051)
T ss_pred HHHHhhhhHhHHHHHhhcCcEEEEEcC
Confidence 345788999999999999999999998
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.50 E-value=3.9 Score=34.35 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=36.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
...++++...|..|+++|+++++.|+... ..++...|+.+.+..
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~a--p~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMA--PQIASQGLETFKVKQ 86 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHhccCc
Confidence 44899999999999999999999999642 577888888877654
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.24 E-value=9.2 Score=36.70 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=33.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
.+.||+.|.++.|++.|.++.++||.+...++.....++++|+.+
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~ 82 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS 82 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence 478999999999999999999999944333333334455677765
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=83.84 E-value=0.58 Score=41.12 Aligned_cols=17 Identities=41% Similarity=0.597 Sum_probs=15.0
Q ss_pred CceEEEEeccCcccccc
Q 019086 83 RDLAVLLEVDGVLVDAY 99 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~ 99 (346)
.+|++|||+||||.|..
T Consensus 6 ~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGR 22 (169)
T ss_pred cCeEEEEeCceeeECCe
Confidence 48899999999999963
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=83.80 E-value=7 Score=36.54 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+.+++|-+.-.-++|||+..--.+|+..+|+.+.|..
T Consensus 219 Fe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 219 FKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred HHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 9999999998788899999999999999999999998764
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=83.12 E-value=1.8 Score=40.56 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=34.4
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
.|.+.++|+.|+++|++++++|+ .....+..+++.+|+..+
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLEDP 63 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Confidence 45677899999999999999999 556778889999998753
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=81.09 E-value=1.4 Score=38.37 Aligned_cols=13 Identities=31% Similarity=0.468 Sum_probs=11.9
Q ss_pred eEEEEeccCcccc
Q 019086 85 LAVLLEVDGVLVD 97 (346)
Q Consensus 85 k~viFDlDGTL~d 97 (346)
|+++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999994
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=81.06 E-value=3.3 Score=41.24 Aligned_cols=32 Identities=9% Similarity=-0.030 Sum_probs=27.2
Q ss_pred HHHHHHHHcCCCCCc---EEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPVRN---CFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e---~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.+|+...+ .++|||..+|..|.+.+
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L 339 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVL 339 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHhh
Confidence 588999999988764 38999999999999963
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-10
Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 80 NPPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DE 137
+ PR + A + ++DG+L+D+ +A LG+D + + L + G
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLW-DRAELDVMASLGVDISRR------NELPDTLGLRI 56
Query: 138 DRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAY 197
D ++ L++ R W P+ ++ + E+ A L + PL PGV + V
Sbjct: 57 DMVVDLWYARQPWNG--PSRQE-------VVERVIARAISLVEETRPLLPGVREAVALCK 107
Query: 198 NEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+G+ + + +A S + V+ + + E++ S
Sbjct: 108 EQGLLVGLASA---SPLHMLEKVLTMFDLRDSFD--ALASAEKLPYS 149
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 6e-10
Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 6/158 (3%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++L+ G +D AF F++ G++ T + + + R ++
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQEGIE---VTQAEAREPMGTEKSEHIRRMLGNS 72
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
S+ L + + + ++ + L PG ++ D +GI +
Sbjct: 73 RIANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGG 132
Query: 206 LTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
T YG + + + + V +V R
Sbjct: 133 NTGYGP---GMMAPALIAAKEQGYTPASTVFATDVVRG 167
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 1e-09
Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 16/163 (9%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-----M 140
AV+ G VD F + F F K G+ I + RK G +
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV-------AITAEEARKPMGLLKIDHVRAL 60
Query: 141 LVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG 200
+ W +A ++ + +E + L L + A GV++ + G
Sbjct: 61 TEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERG 119
Query: 201 IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
I + T Y + V ++ + +V ++V
Sbjct: 120 IKIGSTTGY---TREMMDIVAKEAALQGYKPDFLVTPDDVPAG 159
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 18/163 (11%), Positives = 51/163 (31%), Gaps = 30/163 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ ++DGVL D ++ + G+ + + + ++
Sbjct: 7 AIIFDMDGVLFDTEKYY-YDRRASFLGQKGIS---IDHLPPSFFIGGNT---KQVWENIL 59
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
V T + +E + P V +++ ++G+ + +
Sbjct: 60 RDEYDKWDVST---------LQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGL 110
Query: 206 LTAYGKSGDRIARSVVEKLGSERISKIK-----IVGNEEVERS 243
++ S +E+ ++ ++ EE + S
Sbjct: 111 ASS---SVKADIFRALEENR------LQGFFDIVLSGEEFKES 144
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 7e-09
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 22/161 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
V+ ++DGV+ D QA+ ++G+ A L S D L
Sbjct: 7 GVIFDLDGVITDTAHLH-FQAWQQIAAEIGIS---IDAQFNESLKGISR---DESLRRIL 59
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNAL--DEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
G + E+ L +KN L + PG+ + D + I +
Sbjct: 60 QHGGKEGDFNSQERAQ-----LAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISV 114
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ + S A +++ L E + +++ S
Sbjct: 115 GLASV---S--LNAPTILAALELREFFT--FCADASQLKNS 148
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
+ + ++DG L D+ N A+ A + A W + RK ML
Sbjct: 8 SFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLAMW------RIHRKIGMSGGLMLKSLS 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIV 205
G + E+ L EK E L + L PG + ++ E + +
Sbjct: 61 RETGMSITDEQAER-------LSEKHAQAYERLQHQIIAL-PGAVELLETLDKENLKWCI 112
Query: 206 LTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
T+ G A ++ L IV ++V
Sbjct: 113 ATS---GGIDTATINLKALKLDINKI--NIVTRDDVSYG 146
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-08
Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 24/161 (14%)
Query: 86 AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV 142
AVL ++DGVL D + ++++ ++ G + ++ +
Sbjct: 25 AVLFDMDGVLFDSMPNHA----ESWHKIMKRFGFG---LSREEAYMHEGRTGAS---TIN 74
Query: 143 LFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIP 202
+ R + +K + Q K +EF A PG + + +EG+
Sbjct: 75 IVSRRERGHDATE-----EEIKAIYQAKT---EEFNKCPKAERMPGALEVLTKIKSEGLT 126
Query: 203 LIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
+V+T SG + +V +V+
Sbjct: 127 PMVVTG---SGQTSLLDRLNHNFPGIFQANLMVTAFDVKYG 164
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 9e-08
Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 25/176 (14%)
Query: 75 GHDSQNPPRDL-------AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT 127
H S PR AVL ++DGVL ++ + + +A++ + GLD +
Sbjct: 8 HHSSGLVPRGSHMRKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEAY 63
Query: 128 DLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRP 187
++ + + F R E ++ + +K+ L F + +A P
Sbjct: 64 MHEGRTGAS---TINIVFQRELGKE-ATQEEIES-----IYHEKSIL--FNSYPEAERMP 112
Query: 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
G + + +EG+ +V+T SG +E K +V +V+
Sbjct: 113 GAWELLQKVKSEGLTPMVVTG---SGQLSLLERLEHNFPGMFHKELMVTAFDVKYG 165
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 6e-07
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 22/161 (13%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ ++DGV+ D + A+ +++ + + + L S + L
Sbjct: 4 AVIFDLDGVITDTAEYH-FLAWKHIAEQIDIP---FDRDMNERLKGISREE---SLESIL 56
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAP--LRPGVEDFVDDAYNEGIPL 203
G T EK+ L +KN + L SK P L PG+ + NE I +
Sbjct: 57 IFGGAETKYTNAEKQE-----LMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKI 111
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ ++ R A ++ +L + IV + +
Sbjct: 112 GLASS-----SRNAPKILRRLAIIDDFH--AIVDPTTLAKG 145
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AVL ++DGV+ D + +A+ +++G++ + L S D + ++
Sbjct: 4 AVLFDLDGVITDTAEYH-FRAWKALAEEIGINGVDRQ--FNEQLKGVSREDSLQKILDLA 60
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNA--LDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
++ V E K L ++KN + A + PG+ + D + I +
Sbjct: 61 DK-----KVSAEEFKE-----LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKI 110
Query: 204 IVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEVERS 243
+ +A S + ++E++ + I EV S
Sbjct: 111 ALASA---S--KNGPFLLERMNLTGYFD--AIADPAEVAAS 144
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 46/315 (14%), Positives = 98/315 (31%), Gaps = 87/315 (27%)
Query: 10 LLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPFSA 69
L++ ++ Y Q +L N N F ++ + + Y + L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--QVFAKYNVSRLQPYLKLRQALL------ 145
Query: 70 FSSSSGHDSQNPPRDLAVLLEVDG-------VLV----DAYRFGNRQAFNVAFQKLGLDC 118
P +++ + DG + +Y+ + F + + L +C
Sbjct: 146 --------ELRPAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK-NC 192
Query: 119 ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFL 178
S ML +I P ++ + +K + + L L
Sbjct: 193 -------------NSPETVLEMLQKLLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 179 ASKDAP-----LRPGVEDF-VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232
SK L V++ +A+N +++ T + + V + L + + I
Sbjct: 239 KSKPYENCLLVLL-NVQNAKAWNAFNLSCKILLTTRF--------KQVTDFLSAATTTHI 289
Query: 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 292
+ + +L DE + K + + Q++ EV
Sbjct: 290 SL---DHHSMTLT------------PDEVKSLLL-KYLDCRPQDLPREV----------L 323
Query: 293 TSSPESLDKIVAALR 307
T++P L I ++R
Sbjct: 324 TTNPRRLSIIAESIR 338
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 2e-05
Identities = 41/311 (13%), Positives = 88/311 (28%), Gaps = 78/311 (25%)
Query: 27 YYHYQATQL--RNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPF--SAFSSSS-GHDSQNP 81
++H+ + + F F N++ C V S S H +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFD----CKDVQDMPKSILSKEEIDHIIMSK 58
Query: 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW-TAPIYTDLLRKSAGDEDRM 140
L L + +++ + +PI T+ + S RM
Sbjct: 59 DAVSGTLR-----LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS--MMTRM 111
Query: 141 LVLFFNRIGW-------PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV 193
+ +R+ + +V + ++ L E LRP
Sbjct: 112 YIEQRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLE---------------LRPA----- 150
Query: 194 DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ-FVLGK 252
+++ G G ++ + + + + +V+ + + F L
Sbjct: 151 --------KNVLI--DGVLG--SGKTW---VALD------VCLSYKVQCKMDFKIFWLNL 189
Query: 253 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312
+ + L Q++ ++ D ++ + I A LR
Sbjct: 190 KNCNSPETVL---------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR--RLL 238
Query: 313 AEKPVRNCFLI 323
KP NC L+
Sbjct: 239 KSKPYENCLLV 249
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 30/169 (17%)
Query: 81 PPRDL-AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD 136
PP+ + ++ ++DG+L+D Y F + ++ + + ++ K A
Sbjct: 26 PPQPVTHLIFDMDGLLLDTERLYS----VVFQEICNRYDKK---YSWDVKSLVMGKKA-- 76
Query: 137 EDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDA 196
+ + + P S + +++E + L E A L PG E +
Sbjct: 77 -LEAAQIIIDVLQLPMSK---------EELVEESQTKLKEVFP--TAALMPGAEKLIIHL 124
Query: 197 YNEGIPLIVLTAYGKSGDRIARSVVEKLGS--ERISKIKIVGNEEVERS 243
GIP + T+ S + S I + + EV+
Sbjct: 125 RKHGIPFALATS---SRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 28/159 (17%)
Query: 86 AVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF 144
AV+ + L+D + R F ++G I D + S + ++ L
Sbjct: 27 AVIFDWYNTLIDTSINID-RTTFYQVLDQMGY------KNIDLDSIPNSTIPK-YLITLL 78
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
R K +N+L++ S + L G + +D I +
Sbjct: 79 GKRW---------------KEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMA 123
Query: 205 VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243
+++ K+G+R RS + I+G+ +
Sbjct: 124 IVS--NKNGER-LRSEIHHKNLTHYFDS-IIGSGDTGTI 158
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 16/142 (11%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL--DCANWTAPIYTDLLRKSAGDEDRMLVL 143
AVL++ LV ++ + + G D + + DED + +
Sbjct: 5 AVLVDFGNTLVG-FKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHV 63
Query: 144 FFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL 203
+ + +E+ K + + +A L +F++ + G L
Sbjct: 64 DPKDFLYILGIYPSERLV---------KELKEADIRDGEAFLYDDTLEFLEGLKSNGYKL 114
Query: 204 IVLTAYGKSGDRIARSVVEKLG 225
+++ + ++++EK
Sbjct: 115 ALVS----NASPRVKTLLEKFD 132
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 24/189 (12%), Positives = 45/189 (23%), Gaps = 38/189 (20%)
Query: 63 HVNPFSAFSSSSGHDSQNPPRDL---AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGL 116
++ A + P L A L +VDG ++ A + +
Sbjct: 11 YIRTTKANIQTIAMPLTTKPLSLKINAALFDVDGTIIISQPAI----AAFWRDFGKDKPY 66
Query: 117 DCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDE 176
+ D + F V K
Sbjct: 67 F---DAEHVIHISHGWRTYD---AIAKFAPDFADEEYV--------------NKLEGEIP 106
Query: 177 FLASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDR-IARSVVEKLGSERISKIKI 234
+ + PG + V T SG R +A+ + L +R
Sbjct: 107 EKYGEHSIEVPGAVKLCNALNALPKEKWAVAT----SGTRDMAKKWFDILKIKRPE--YF 160
Query: 235 VGNEEVERS 243
+ +V++
Sbjct: 161 ITANDVKQG 169
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 8e-04
Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 25/157 (15%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLF 144
++ + DGVLVD+ Q + + G + ++ + AG +L+
Sbjct: 6 LIIFDCDGVLVDSEIIAA-QVESRLLTEAGYPISVE------EMGERFAGMTWKNILLQV 58
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLI 204
+ P S ++L + + LD L +D + GV+ + P
Sbjct: 59 ESEASIPLSA----------SLLDKSEKLLDMRLE-RDVKIIDGVKFALSRL---TTPRC 104
Query: 205 VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241
+ + S ++ K+G + I +++
Sbjct: 105 ICSN---SSSHRLDMMLTKVGLKPYFAPHIYSAKDLG 138
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 346 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.96 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.94 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.93 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.92 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.92 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.92 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.92 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.91 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.91 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.91 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.91 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.91 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.91 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.9 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.9 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.9 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.9 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.89 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.89 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.89 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.89 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.89 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.89 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.89 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.89 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.89 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.88 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.88 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.88 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.88 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.88 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.88 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.87 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.87 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.87 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.87 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.87 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.87 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.87 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.86 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.86 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.86 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.86 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.86 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.86 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.85 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.85 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.85 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.85 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.84 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.84 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.84 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.83 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.83 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.83 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.83 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.83 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.82 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.81 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.81 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.81 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.8 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.78 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.78 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.78 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.76 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.76 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.74 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.74 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.74 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.73 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.73 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.73 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.73 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.72 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.71 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.7 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.7 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.68 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.67 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.66 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.65 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.63 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.62 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.62 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.62 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.61 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.6 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.59 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.58 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.57 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.56 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.55 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.55 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.54 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.54 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.54 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.5 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.48 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.48 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.48 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.47 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.46 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.46 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.18 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.39 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.38 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.37 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.37 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.35 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.34 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.34 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.32 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.31 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.28 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.28 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.24 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.21 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.16 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.08 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.07 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.06 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.0 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.97 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.93 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.91 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.88 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.88 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.75 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.75 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.73 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.71 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.69 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.66 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.65 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.56 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.37 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.37 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.29 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.99 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.96 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.86 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.79 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.52 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.48 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.27 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.17 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.14 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.14 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.12 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 96.84 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.68 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.66 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.17 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 94.76 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 94.7 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.7 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 94.5 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 93.73 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.16 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 93.09 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 92.73 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 91.38 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 91.28 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 89.71 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 89.34 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 86.43 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 84.69 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 84.52 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 84.02 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 83.47 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 81.69 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 80.49 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=216.84 Aligned_cols=185 Identities=22% Similarity=0.288 Sum_probs=140.7
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+||||+||||+|+... +..+|.++++++|++ ++++.+....+. ................... ..+.
T Consensus 1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~-----~~~~ 68 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKP---YTEDLHRRIMGV---PEREGLPILMEALEIKDSL-----ENFK 68 (216)
T ss_dssp CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCC---CCHHHHHHHTTS---CHHHHHHHHHHHTTCCSCH-----HHHH
T ss_pred CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcc---chhhhhhhhhhcccchhhH-----HHHH
Confidence 589999999999999886 789999999999997 666666555432 3344444555555544321 2222
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
+.+.+.....+.+ ..+++||+.++++.|+++|++++++|| +....+...++.+|+.++|+..+.+. +
T Consensus 69 ~~~~~~~~~~~~~-----~~~~~pg~~~~l~~L~~~g~~~~i~tn---~~~~~~~~~l~~~~l~~~fd~~~~~~-~---- 135 (216)
T 3kbb_A 69 KRVHEEKKRVFSE-----LLKENPGVREALEFVKSKRIKLALATS---TPQREALERLRRLDLEKYFDVMVFGD-Q---- 135 (216)
T ss_dssp HHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEECGG-G----
T ss_pred HHHHHHHHHHHHH-----hcccCccHHHHHHHHHHcCCCcccccC---CcHHHHHHHHHhcCCCcccccccccc-c----
Confidence 2333333332222 256899999999999999999999999 77888999999999999988754433 1
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
+. ..||+|++ |+.+++++|++|++|+||
T Consensus 136 ----------~~----------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~V 163 (216)
T 3kbb_A 136 ----------VK----------------------------NGKPDPEI--------------YLLVLERLNVVPEKVVVF 163 (216)
T ss_dssp ----------SS----------------------------SCTTSTHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred ----------cC----------------------------CCcccHHH--------------HHHHHHhhCCCccceEEE
Confidence 11 22888888 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEE-ecC
Q 019086 324 AGSQSGVAGAQRIGMPCVV-MRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~-v~~ 345 (346)
||+.+||.+|+++||.+|+ +++
T Consensus 164 gDs~~Di~aA~~aG~~~i~~v~~ 186 (216)
T 3kbb_A 164 EDSKSGVEAAKSAGIERIYGVVH 186 (216)
T ss_dssp ECSHHHHHHHHHTTCCCEEEECC
T ss_pred ecCHHHHHHHHHcCCcEEEEecC
Confidence 9999999999999999985 554
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-29 Score=225.97 Aligned_cols=193 Identities=17% Similarity=0.202 Sum_probs=143.4
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.|++|+||||+||||+|+... +..+|+++++++|++ ++.+.+..+.+ .......+.+....+........+
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~-- 72 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGIS---IDAQFNESLKG---ISRDESLRRILQHGGKEGDFNSQE-- 72 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCTTGGGGGTT---CCHHHHHHHHHHHTTCGGGCCHHH--
T ss_pred CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcC---CCHHHHHHHHHHHhhcccchhHHH--
Confidence 478999999999999999886 789999999999997 45444333332 234445556666666543333222
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhh
Q 019086 161 AFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e 239 (346)
...+.......+...+.. ....++||+.++++.|+++|++++++||+ .....+++.+|+.++|+..+.+
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~-----~~~~~~l~~~gl~~~fd~i~~~--- 142 (243)
T 4g9b_A 73 --RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVS-----LNAPTILAALELREFFTFCADA--- 142 (243)
T ss_dssp --HHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEECCG---
T ss_pred --HHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccc-----cchhhhhhhhhhcccccccccc---
Confidence 223333444444444422 23458999999999999999999999993 3367789999999988764322
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
+.+.. .||+|++ |+.+++++|++|++
T Consensus 143 ------------~~~~~----------------------------~KP~p~~--------------~~~a~~~lg~~p~e 168 (243)
T 4g9b_A 143 ------------SQLKN----------------------------SKPDPEI--------------FLAACAGLGVPPQA 168 (243)
T ss_dssp ------------GGCSS----------------------------CTTSTHH--------------HHHHHHHHTSCGGG
T ss_pred ------------ccccC----------------------------CCCcHHH--------------HHHHHHHcCCChHH
Confidence 22222 2888888 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
|+||||+.+||.+|+++||.+|+|+++
T Consensus 169 ~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 169 CIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 999999999999999999999999864
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-27 Score=213.29 Aligned_cols=189 Identities=19% Similarity=0.200 Sum_probs=138.0
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+||||+||||+|+... +..+|.++++++|++ ++.+.+..+.+ .........+.............. .
T Consensus 26 IKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~----~ 94 (250)
T 4gib_A 26 IEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGID---IDTKFNESLKG---ISRMESLDRILEFGNKKYSFSEEE----K 94 (250)
T ss_dssp CCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCC---CCTTGGGGTTT---CCHHHHHHHHHHHTTCTTTSCHHH----H
T ss_pred hheeeecCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---cchHHHHHHhhhhhcCCCCCCHHH----H
Confidence 799999999999999886 779999999999997 44443333222 123334444444444433333222 2
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 164 KNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
..+.+.....+...... ...+++||+.++++.|+++|+++++.|+. ..+..+++.+|+.++|+..+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~-----~~~~~~L~~~gl~~~Fd~i~~~~----- 164 (250)
T 4gib_A 95 VRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS-----KNAINVLNHLGISDKFDFIADAG----- 164 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHHTCGGGCSEECCGG-----
T ss_pred HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc-----chhhhHhhhcccccccceeeccc-----
Confidence 33444555555555422 23568999999999999999999998772 34667899999999887743222
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.+.. .||+|++ |+.+++++|++|++|+|
T Consensus 165 ----------~~~~----------------------------~KP~p~~--------------~~~a~~~lg~~p~e~l~ 192 (250)
T 4gib_A 165 ----------KCKN----------------------------NKPHPEI--------------FLMSAKGLNVNPQNCIG 192 (250)
T ss_dssp ----------GCCS----------------------------CTTSSHH--------------HHHHHHHHTCCGGGEEE
T ss_pred ----------ccCC----------------------------CCCcHHH--------------HHHHHHHhCCChHHeEE
Confidence 2221 2888888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+||.+|++|||.+|+|++
T Consensus 193 VGDs~~Di~aA~~aG~~~i~v~~ 215 (250)
T 4gib_A 193 IEDASAGIDAINSANMFSVGVGN 215 (250)
T ss_dssp EESSHHHHHHHHHTTCEEEEESC
T ss_pred ECCCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999965
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=199.62 Aligned_cols=181 Identities=16% Similarity=0.228 Sum_probs=131.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|++|+|+||+||||+|+... +..++.++++++|++. .+...+..+. |.... .....+ + +.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~----g~~~~---~~~~~~-~----~~~~--- 63 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFM----GPPLE---SSFATC-L----SKDQ--- 63 (210)
T ss_dssp TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTS----SSCHH---HHHHTT-S----CGGG---
T ss_pred CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHc----CccHH---HHHHHH-c----CHHH---
Confidence 45789999999999999876 7788999999999872 2333333222 22211 122222 1 2122
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.+.+.+.+.+.+.... .....++||+.++|+.|++ |++++|+|| +....++.+++.+|+..+|+..+.+. .
T Consensus 64 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~---~~~~~~~~~l~~~gl~~~f~~i~~~~--~- 134 (210)
T 2ah5_A 64 -ISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTT---KDTSTAQDMAKNLEIHHFFDGIYGSS--P- 134 (210)
T ss_dssp -HHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEEC--S-
T ss_pred -HHHHHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHHhcCchhheeeeecCC--C-
Confidence 2233333444443332 1235689999999999999 999999999 66778899999999999887643221 0
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
. .||+|++ |+.+++++|++|++|+
T Consensus 135 --------------~----------------------------~Kp~p~~--------------~~~~~~~lg~~p~~~~ 158 (210)
T 2ah5_A 135 --------------E----------------------------APHKADV--------------IHQALQTHQLAPEQAI 158 (210)
T ss_dssp --------------S----------------------------CCSHHHH--------------HHHHHHHTTCCGGGEE
T ss_pred --------------C----------------------------CCCChHH--------------HHHHHHHcCCCcccEE
Confidence 1 1777777 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|+++|+++||.+|+|.+
T Consensus 159 ~vgDs~~Di~~a~~aG~~~i~v~~ 182 (210)
T 2ah5_A 159 IIGDTKFDMLGARETGIQKLAITW 182 (210)
T ss_dssp EEESSHHHHHHHHHHTCEEEEESS
T ss_pred EECCCHHHHHHHHHCCCcEEEEcC
Confidence 999999999999999999999875
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-25 Score=198.81 Aligned_cols=192 Identities=18% Similarity=0.212 Sum_probs=135.9
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCC-CCCCChHHHHHHHhhccCChHHHHHHHHHH-----------hC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----------IG 149 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------~g 149 (346)
|.+|+|+||+||||+|+... +..++.++++++|++ . .+...+....+ .........+... ++
T Consensus 2 M~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHD--FTVEDIKNFFG---SGVVVAVTRALAYEAGSSRESLVAFG 75 (240)
T ss_dssp CSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCC--CCHHHHHHHCS---SCHHHHHHHHHHHHTTCCHHHHTTTT
T ss_pred CcccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCC--CCHHHHHHhcC---ccHHHHHHHHHHhccccccccccccc
Confidence 45789999999999999886 778999999999985 2 34444443332 2222232222210 01
Q ss_pred C-----CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh
Q 019086 150 W-----PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (346)
Q Consensus 150 ~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l 224 (346)
. ...++ ...++.+...+.+.|.... .....++||+.++|+.|+++|++++|+|| +....++.+++.+
T Consensus 76 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~ 147 (240)
T 2hi0_A 76 TKDEQIPEAVT----QTEVNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSN---KPNEAVQVLVEEL 147 (240)
T ss_dssp STTCCCCTTCC----HHHHHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHH
T ss_pred ccccccCCCCC----HHHHHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHc
Confidence 0 00111 1123344444444454433 33467899999999999999999999999 6678889999999
Q ss_pred CcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHH
Q 019086 225 GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVA 304 (346)
Q Consensus 225 gl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~ 304 (346)
|+. +|+..+.+. + +.. .||+|++
T Consensus 148 ~l~-~f~~~~~~~-~--------------~~~----------------------------~Kp~p~~------------- 170 (240)
T 2hi0_A 148 FPG-SFDFALGEK-S--------------GIR----------------------------RKPAPDM------------- 170 (240)
T ss_dssp STT-TCSEEEEEC-T--------------TSC----------------------------CTTSSHH-------------
T ss_pred CCc-ceeEEEecC-C--------------CCC----------------------------CCCCHHH-------------
Confidence 998 877643222 1 111 2788777
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+++++|++|++|++|||+.+|+.||+++|+.+|+|.+
T Consensus 171 -~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~ 210 (240)
T 2hi0_A 171 -TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNW 210 (240)
T ss_dssp -HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred -HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECC
Confidence 9999999999999999999999999999999999999865
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=193.97 Aligned_cols=189 Identities=17% Similarity=0.240 Sum_probs=136.6
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|+|||||||+++... +..++.++++++|++ ++...+....+ .........+....+....++.++ +
T Consensus 2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~----~ 70 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIP---FDRDMNERLKG---ISREESLESILIFGGAETKYTNAE----K 70 (233)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHTTT---CCHHHHHHHHHHHTTCTTTSCHHH----H
T ss_pred CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcC---CCHHHHHHHHHHHhCCCCCCCHHH----H
Confidence 689999999999998875 678999999999997 45444443332 234445566667776533333333 3
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 164 KNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
..+.......+...+.. ....++||+.++|+.|+++|++++|+|| +.. +..+++.+|+..+|+..+.+. +
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~--~~~~l~~~gl~~~f~~i~~~~-~--- 141 (233)
T 3nas_A 71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS---SRN--APKILRRLAIIDDFHAIVDPT-T--- 141 (233)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCS---CTT--HHHHHHHTTCTTTCSEECCC------
T ss_pred HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcC---chh--HHHHHHHcCcHhhcCEEeeHh-h---
Confidence 34444555555555522 1234899999999999999999999999 322 788999999998887643222 1
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
+ ...||+|.+ |+.+++++|++|++|++
T Consensus 142 -----------~----------------------------~~~Kp~~~~--------------~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 142 -----------L----------------------------AKGKPDPDI--------------FLTAAAMLDVSPADCAA 168 (233)
T ss_dssp ----------------------------------------------CCH--------------HHHHHHHHTSCGGGEEE
T ss_pred -----------C----------------------------CCCCCChHH--------------HHHHHHHcCCCHHHEEE
Confidence 1 122788887 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+|+.||+++||.+|++.+
T Consensus 169 vGDs~~Di~~a~~aG~~~~~~~~ 191 (233)
T 3nas_A 169 IEDAEAGISAIKSAGMFAVGVGQ 191 (233)
T ss_dssp EECSHHHHHHHHHTTCEEEECC-
T ss_pred EeCCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999864
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-25 Score=193.73 Aligned_cols=188 Identities=12% Similarity=0.125 Sum_probs=136.4
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||+++... +..++.++++++|++ ++...+....+. ........+....+....
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~-------- 67 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGIS---IDHLPPSFFIGG---NTKQVWENILRDEYDKWD-------- 67 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CTTSCHHHHTTS---CGGGCHHHHHGGGGGGSC--------
T ss_pred ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcCC---CHHHHHHHHHHhhcCCCC--------
Confidence 45899999999999998886 678899999999986 333334443332 233333444444432211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
...+.....+.+..........++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+..+.+.
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~---- 139 (214)
T 3e58_A 68 -VSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASS---SVKADIFRALEENRLQGFFDIVLSGE---- 139 (214)
T ss_dssp -HHHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEGG----
T ss_pred -HHHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeC---CcHHHHHHHHHHcCcHhheeeEeecc----
Confidence 1233333333333332111235899999999999999999999999 67788999999999998887643322
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
.+.. .||+|.+ |+.+++++|++|++|+
T Consensus 140 -----------~~~~----------------------------~kp~~~~--------------~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 140 -----------EFKE----------------------------SKPNPEI--------------YLTALKQLNVQASRAL 166 (214)
T ss_dssp -----------GCSS----------------------------CTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred -----------cccC----------------------------CCCChHH--------------HHHHHHHcCCChHHeE
Confidence 1111 2677776 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|+.||+++|+.++++.+
T Consensus 167 ~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 167 IIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp EEECSHHHHHHHHHTTCEEEEECC
T ss_pred EEeccHhhHHHHHHCCCEEEEECC
Confidence 999999999999999999999875
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-25 Score=195.65 Aligned_cols=192 Identities=18% Similarity=0.217 Sum_probs=138.9
Q ss_pred CCCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCCh
Q 019086 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 78 ~~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 157 (346)
....+++|+|+||+||||+++... +..++.++++++|. .++...+....+. ....+...+. +.. ....
T Consensus 13 ~~~~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~---~~~~~~~~~~~g~---~~~~~~~~~~---~~~--~~~~ 80 (237)
T 4ex6_A 13 GAPAAADRGVILDLDGTLADTPAA-IATITAEVLAAMGT---AVSRGAILSTVGR---PLPASLAGLL---GVP--VEDP 80 (237)
T ss_dssp ----CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTTC---CCCHHHHHHHTTS---CHHHHHHHHH---TSC--TTSH
T ss_pred CCCcccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcCC---CCCHHHHHHhcCc---cHHHHHHHHh---CCC--CCHH
Confidence 344567999999999999998875 77899999999993 3665555554432 2333333332 211 1112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 158 EKKAFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
. +..+.....+.+.+.+.. ....++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+..+.+
T Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~ 153 (237)
T 4ex6_A 81 R----VAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATS---KVEKAARAIAELTGLDTRLTVIAGD 153 (237)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECS---SCHHHHHHHHHHHTGGGTCSEEECT
T ss_pred H----HHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCchhheeeEEeC
Confidence 2 334444444445444420 3456899999999999999999999999 6678899999999999887764322
Q ss_pred hhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 019086 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (346)
Q Consensus 237 ~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~ 316 (346)
+.+..+ ||+|.+ |+.+++++|++
T Consensus 154 ---------------~~~~~~----------------------------kp~~~~--------------~~~~~~~lg~~ 176 (237)
T 4ex6_A 154 ---------------DSVERG----------------------------KPHPDM--------------ALHVARGLGIP 176 (237)
T ss_dssp ---------------TTSSSC----------------------------TTSSHH--------------HHHHHHHHTCC
T ss_pred ---------------CCCCCC----------------------------CCCHHH--------------HHHHHHHcCCC
Confidence 222222 677776 99999999999
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 317 p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|++|||+.+|+.||+++|+.+|+|.+
T Consensus 177 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~ 205 (237)
T 4ex6_A 177 PERCVVIGDGVPDAEMGRAAGMTVIGVSY 205 (237)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred HHHeEEEcCCHHHHHHHHHCCCeEEEEec
Confidence 99999999999999999999999999865
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=193.46 Aligned_cols=194 Identities=14% Similarity=0.140 Sum_probs=137.8
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHH----hCCCCCC
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----IGWPTSV 154 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~g~~~~~ 154 (346)
.....+|+|+||+||||+|+... +..++.++++++|++. .+...+..+.+ .....+....... ++. ..
T Consensus 18 ~~~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~--~~ 89 (243)
T 2hsz_A 18 QGMTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIG---NGADVLSQRAVDWACKQAEK--EL 89 (243)
T ss_dssp -CCSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCS---SCHHHHHHHHHHHHHHHHTC--CC
T ss_pred cCCccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhC---chHHHHHHHHhhhhhccccc--cC
Confidence 34456889999999999999875 6788999999999873 44444444332 1222222222221 121 11
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
..+. +..+.+.+.+.|.... .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+
T Consensus 90 ~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~gl~~~f~~~~ 161 (243)
T 2hsz_A 90 TEDE----FKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTN---KPTKHVQPILTAFGIDHLFSEML 161 (243)
T ss_dssp CHHH----HHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEE
T ss_pred CHHH----HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEEC---CcHHHHHHHHHHcCchheEEEEE
Confidence 2111 2233344444454443 33467899999999999999999999999 66788999999999998877543
Q ss_pred cchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC
Q 019086 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (346)
Q Consensus 235 ~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg 314 (346)
.+ +.+. ..||+|.+ |+.+++++|
T Consensus 162 ~~---------------~~~~----------------------------~~Kp~~~~--------------~~~~~~~~~ 184 (243)
T 2hsz_A 162 GG---------------QSLP----------------------------EIKPHPAP--------------FYYLCGKFG 184 (243)
T ss_dssp CT---------------TTSS----------------------------SCTTSSHH--------------HHHHHHHHT
T ss_pred ec---------------ccCC----------------------------CCCcCHHH--------------HHHHHHHhC
Confidence 22 1111 12777776 999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 315 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 315 v~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++++|++|||+.+|+.||+.+|+.+|+|.+
T Consensus 185 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 215 (243)
T 2hsz_A 185 LYPKQILFVGDSQNDIFAAHSAGCAVVGLTY 215 (243)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred cChhhEEEEcCCHHHHHHHHHCCCeEEEEcC
Confidence 9999999999999999999999999999875
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=191.83 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=138.7
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHH-HHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI-YTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
|.+|+|+||+||||+++... +..++.+++.++|++ ..... +..+. +.....+...+...++.... .+.
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~--~~~-- 94 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLH---LDLTEIAMYFT---GQRFDGVLAYLAQQHDFVPP--PDF-- 94 (259)
T ss_dssp CCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTT---TCCHHHHHHHHHHHHCCCCC--TTH--
T ss_pred cCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHh---CCCHHHHHHHHHHHcCCCCC--HHH--
Confidence 56899999999999998875 678899999999987 33222 22222 23445555666667776533 121
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
+..+.. .+.+.. ....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+++.++.
T Consensus 95 --~~~~~~----~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~i~~~~~~ 163 (259)
T 4eek_A 95 --LDVLET----RFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSN---SERGRLHLKLRVAGLTELAGEHIYDPSWV 163 (259)
T ss_dssp --HHHHHH----HHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECS---SCHHHHHHHHHHTTCHHHHCSCEECGGGG
T ss_pred --HHHHHH----HHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHhcChHhhccceEEeHhhc
Confidence 222222 222222 4467999999999999999999999999 66788999999999998887623333221
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
. ...||+|.+ |+.+++++|++|++|
T Consensus 164 --------------~---------------------------~~~Kp~~~~--------------~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 164 --------------G---------------------------GRGKPHPDL--------------YTFAAQQLGILPERC 188 (259)
T ss_dssp --------------T---------------------------TCCTTSSHH--------------HHHHHHHTTCCGGGE
T ss_pred --------------C---------------------------cCCCCChHH--------------HHHHHHHcCCCHHHE
Confidence 1 012777777 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|||+.+|+.||+++|+.+|+|.+
T Consensus 189 i~iGD~~~Di~~a~~aG~~~i~v~~ 213 (259)
T 4eek_A 189 VVIEDSVTGGAAGLAAGATLWGLLV 213 (259)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEECC
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEcc
Confidence 9999999999999999999999864
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=186.80 Aligned_cols=188 Identities=16% Similarity=0.194 Sum_probs=137.7
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
.+|+|+||+||||+++... +..++.++++++|++ ++...+....+ .....+...+....+... +.+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~--~~~~---- 71 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIP---LAMWRIHRKIG---MSGGLMLKSLSRETGMSI--TDEQ---- 71 (233)
T ss_dssp CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTT---SCHHHHHHHHHHC----C--CHHH----
T ss_pred cCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHHcC---CcHHHHHHHHHHhcCCCC--CHHH----
Confidence 4789999999999998875 678899999999998 44444444332 233444445555554332 2122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
+..+.....+.+.... ....++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+..+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~----- 141 (233)
T 3s6j_A 72 AERLSEKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATS---GGIDTATINLKALKLDINKINIVTRD----- 141 (233)
T ss_dssp HHHHHHHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECS---SCHHHHHHHHHTTTCCTTSSCEECGG-----
T ss_pred HHHHHHHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeC---CchhhHHHHHHhcchhhhhheeeccc-----
Confidence 2333344444444432 2367899999999999999999999999 66788999999999998887643322
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.+.. .||++.+ |+.+++++|++|++|++
T Consensus 142 ----------~~~~----------------------------~kp~~~~--------------~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 142 ----------DVSY----------------------------GKPDPDL--------------FLAAAKKIGAPIDECLV 169 (233)
T ss_dssp ----------GSSC----------------------------CTTSTHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ----------cCCC----------------------------CCCChHH--------------HHHHHHHhCCCHHHEEE
Confidence 1111 2677776 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+|+.||+.+|+.+|+|.+
T Consensus 170 iGD~~~Di~~a~~aG~~~i~v~~ 192 (233)
T 3s6j_A 170 IGDAIWDMLAARRCKATGVGLLS 192 (233)
T ss_dssp EESSHHHHHHHHHTTCEEEEEGG
T ss_pred EeCCHHhHHHHHHCCCEEEEEeC
Confidence 99999999999999999999864
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=189.09 Aligned_cols=187 Identities=17% Similarity=0.285 Sum_probs=133.2
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHH-HHHHhCCCCCCCChhHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL-FFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~ 160 (346)
|.+|+|+||+||||+++... +..++.++++++|+. +........ .+......... +...++.+. +.++
T Consensus 22 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~--~~~~-- 90 (243)
T 3qxg_A 22 KKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLD---LSREEAYMH---EGRTGASTINIVFQRELGKEA--TQEE-- 90 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHT---TTSCHHHHHHHHHHHHHSSCC--CHHH--
T ss_pred ccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHH---hCCCHHHHHHHHHHHHhCCCC--CHHH--
Confidence 45799999999999998875 678999999999987 333332222 22233333333 333455432 2122
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch--hheecchh
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNE 238 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f--~~~i~~~~ 238 (346)
+..+.......+.. .....++||+.++|+.|+++|++++++|| +....+...++. |+..+| +..+.+
T Consensus 91 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~-~l~~~f~~d~i~~~-- 159 (243)
T 3qxg_A 91 --IESIYHEKSILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTG---SGQLSLLERLEH-NFPGMFHKELMVTA-- 159 (243)
T ss_dssp --HHHHHHHHHHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECC---CCCHHHHTTHHH-HSTTTCCGGGEECT--
T ss_pred --HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHH-hHHHhcCcceEEeH--
Confidence 22333333322221 13467899999999999999999999999 566777788888 998887 554322
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
+.+..+ ||+|.+ |+.+++++|++|+
T Consensus 160 -------------~~~~~~----------------------------kp~~~~--------------~~~~~~~lg~~~~ 184 (243)
T 3qxg_A 160 -------------FDVKYG----------------------------KPNPEP--------------YLMALKKGGLKAD 184 (243)
T ss_dssp -------------TTCSSC----------------------------TTSSHH--------------HHHHHHHTTCCGG
T ss_pred -------------HhCCCC----------------------------CCChHH--------------HHHHHHHcCCCHH
Confidence 222222 777777 9999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|||+.+|+.||+++|+.+|++.+
T Consensus 185 ~~i~vGD~~~Di~~a~~aG~~~i~v~~ 211 (243)
T 3qxg_A 185 EAVVIENAPLGVEAGHKAGIFTIAVNT 211 (243)
T ss_dssp GEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred HeEEEeCCHHHHHHHHHCCCEEEEEeC
Confidence 999999999999999999999999875
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=190.67 Aligned_cols=186 Identities=20% Similarity=0.324 Sum_probs=136.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+.+|+|+||+||||+++... +..++.++++++|++ ++...+....+ .........+...++.+..
T Consensus 28 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~-------- 92 (250)
T 3l5k_A 28 QPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKK---YSWDVKSLVMG---KKALEAAQIIIDVLQLPMS-------- 92 (250)
T ss_dssp CCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTT---CCHHHHHHHHHHHHTCSSC--------
T ss_pred cCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHhcC---CCHHHHHHHHHHHhCCCCC--------
Confidence 56899999999999998875 778999999999987 44444444332 3445555667777776432
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~e~ 240 (346)
...+.....+.+.+.. ....++||+.++|+.|+++|++++|+|| +....+...+.. +|+..+|+..+
T Consensus 93 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn---~~~~~~~~~l~~~~~l~~~f~~~~------ 160 (250)
T 3l5k_A 93 -KEELVEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATS---SRSASFDMKTSRHKEFFSLFSHIV------ 160 (250)
T ss_dssp -HHHHHHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECS---CCHHHHHHHTTTCHHHHTTSSCEE------
T ss_pred -HHHHHHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeC---CCHHHHHHHHHhccCHHhheeeEE------
Confidence 1233344444444444 2367999999999999999999999999 555555555533 56766665532
Q ss_pred HHhhhhcccccc--ccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC-
Q 019086 241 ERSLYGQFVLGK--GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV- 317 (346)
Q Consensus 241 ~~~~f~~i~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p- 317 (346)
.++ .+..+ ||+|.+ |+.+++++|+++
T Consensus 161 ---------~~~~~~~~~~----------------------------Kp~~~~--------------~~~~~~~lgi~~~ 189 (250)
T 3l5k_A 161 ---------LGDDPEVQHG----------------------------KPDPDI--------------FLACAKRFSPPPA 189 (250)
T ss_dssp ---------CTTCTTCCSC----------------------------TTSTHH--------------HHHHHHTSSSCCC
T ss_pred ---------ecchhhccCC----------------------------CCChHH--------------HHHHHHHcCCCCC
Confidence 222 22222 777777 999999999998
Q ss_pred -CcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 318 -RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 318 -~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|++|||+.+|+.||+++||.+|+|.+
T Consensus 190 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 218 (250)
T 3l5k_A 190 MEKCLVFEDAPNGVEAALAAGMQVVMVPD 218 (250)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred cceEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999999875
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=192.62 Aligned_cols=184 Identities=13% Similarity=0.173 Sum_probs=131.5
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||+++... +..++.+++.++|++. .+.+.+.... +.....+...+. + +...
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~---g~~~~~~~~~~~---~-~~~~------- 63 (222)
T 2nyv_A 1 MSLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEE--YYPDNVTKYI---GGGVRALLEKVL---K-DKFR------- 63 (222)
T ss_dssp CEECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGG--GCCSCGGGGC---SSCHHHHHHHHH---G-GGCC-------
T ss_pred CCCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHh---CcCHHHHHHHHh---C-hHHH-------
Confidence 45789999999999999876 6788899999999862 2222221211 122223322222 1 1111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
+.+...+.+.+.... .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+.+.
T Consensus 64 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~gl~~~f~~i~~~~---- 133 (222)
T 2nyv_A 64 --EEYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSN---KLEELSKKILDILNLSGYFDLIVGGD---- 133 (222)
T ss_dssp --THHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEECTT----
T ss_pred --HHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCHHHheEEEecC----
Confidence 123333344443332 24567899999999999999999999999 66788899999999988877643222
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
.+. ..||+|.+ |+.+++++|++|++|+
T Consensus 134 -----------~~~----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~ 160 (222)
T 2nyv_A 134 -----------TFG----------------------------EKKPSPTP--------------VLKTLEILGEEPEKAL 160 (222)
T ss_dssp -----------SSC----------------------------TTCCTTHH--------------HHHHHHHHTCCGGGEE
T ss_pred -----------cCC----------------------------CCCCChHH--------------HHHHHHHhCCCchhEE
Confidence 111 12677777 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|+.+|+++|+.+|+|.+
T Consensus 161 ~vGD~~~Di~~a~~aG~~~i~v~~ 184 (222)
T 2nyv_A 161 IVGDTDADIEAGKRAGTKTALALW 184 (222)
T ss_dssp EEESSHHHHHHHHHHTCEEEEETT
T ss_pred EECCCHHHHHHHHHCCCeEEEEcC
Confidence 999999999999999999998875
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=187.44 Aligned_cols=187 Identities=16% Similarity=0.211 Sum_probs=130.2
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHH-HHHHhCCCCCCCChhHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL-FFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~ 160 (346)
+.+|+|+||+||||+++... +..++.++++++|++ ......... .+......... +...++.+. +.++
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~--~~~~-- 89 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFG---LSREEAYMH---EGRTGASTINIVSRRERGHDA--TEEE-- 89 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHT---TTSCHHHHHHHHHHHHHSSCC--CHHH--
T ss_pred CCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHH---hCCChHHHHHHHHHHhcCCCC--CHHH--
Confidence 56899999999999998876 678899999999997 333332222 22233333333 333455432 2111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch--hheecchh
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNE 238 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f--~~~i~~~~ 238 (346)
+..+.......+.. .....++||+.++|+.|+++|++++++|| +....+...++. |+..+| +..+.+
T Consensus 90 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~-~l~~~f~~~~~~~~-- 158 (247)
T 3dv9_A 90 --IKAIYQAKTEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTG---SGQTSLLDRLNH-NFPGIFQANLMVTA-- 158 (247)
T ss_dssp --HHHHHHHHHHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECS---CC---CHHHHHH-HSTTTCCGGGEECG--
T ss_pred --HHHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcC---CchHHHHHHHHh-hHHHhcCCCeEEec--
Confidence 22222222222211 13467899999999999999999999999 556777778888 998887 654322
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
+.+.. .||+|.+ |+.+++++|++|+
T Consensus 159 -------------~~~~~----------------------------~kp~~~~--------------~~~~~~~lg~~~~ 183 (247)
T 3dv9_A 159 -------------FDVKY----------------------------GKPNPEP--------------YLMALKKGGFKPN 183 (247)
T ss_dssp -------------GGCSS----------------------------CTTSSHH--------------HHHHHHHHTCCGG
T ss_pred -------------ccCCC----------------------------CCCCCHH--------------HHHHHHHcCCChh
Confidence 22222 2777777 9999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|||+.+|+.||+++|+.+|+|.+
T Consensus 184 ~~i~vGD~~~Di~~a~~aG~~~i~v~~ 210 (247)
T 3dv9_A 184 EALVIENAPLGVQAGVAAGIFTIAVNT 210 (247)
T ss_dssp GEEEEECSHHHHHHHHHTTSEEEEECC
T ss_pred heEEEeCCHHHHHHHHHCCCeEEEEcC
Confidence 999999999999999999999999876
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=186.82 Aligned_cols=184 Identities=13% Similarity=0.172 Sum_probs=131.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|+||+||||+++... +..++.++++++|.+. .....+.... |.... ..+...++.+ .+. +
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~----g~~~~--~~~~~~~~~~----~~~----~ 66 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQV--EDLSSLNKFV----GPPLK--TSFMEYYNFD----EET----A 66 (226)
T ss_dssp CCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCC--SCGGGGGGGS----SSCHH--HHHHHHHCCC----HHH----H
T ss_pred CCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHh----CcCHH--HHHHHHhCCC----HHH----H
Confidence 789999999999998875 6788899999999873 2222222222 22211 1222233332 111 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
..+...+.+.+.... .....++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+..+.+
T Consensus 67 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~------- 135 (226)
T 3mc1_A 67 TVAIDYYRDYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATS---KPTVFSKQILEHFKLAFYFDAIVGS------- 135 (226)
T ss_dssp HHHHHHHHHHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEE-------
T ss_pred HHHHHHHHHHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCHhheeeeecc-------
Confidence 233333333332222 23467999999999999999999999999 6778899999999999887764322
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
+.+..+ ||+|.+ |+.+++++|++|++|++|
T Consensus 136 --------~~~~~~----------------------------kp~~~~--------------~~~~~~~lgi~~~~~i~i 165 (226)
T 3mc1_A 136 --------SLDGKL----------------------------STKEDV--------------IRYAMESLNIKSDDAIMI 165 (226)
T ss_dssp --------CTTSSS----------------------------CSHHHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred --------CCCCCC----------------------------CCCHHH--------------HHHHHHHhCcCcccEEEE
Confidence 222222 666666 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||+.+|+.||+++|+.+|+|.+
T Consensus 166 GD~~~Di~~a~~aG~~~i~v~~ 187 (226)
T 3mc1_A 166 GDREYDVIGALKNNLPSIGVTY 187 (226)
T ss_dssp ESSHHHHHHHHTTTCCEEEESS
T ss_pred CCCHHHHHHHHHCCCCEEEEcc
Confidence 9999999999999999999874
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=187.69 Aligned_cols=192 Identities=16% Similarity=0.162 Sum_probs=136.1
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCCh----------HHHHHHHHHHhCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE----------DRMLVLFFNRIGWP 151 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~g~~ 151 (346)
+.+|+|+||+||||+++.......++.++++++|++ ++...+....+ ... ......+...++..
T Consensus 12 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (277)
T 3iru_A 12 GPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIE---VTQAEAREPMG---TEKSEHIRRMLGNSRIANAWLSIKGQA 85 (277)
T ss_dssp CCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCC---CCHHHHHTTTT---SCHHHHHHHHTTSHHHHHHHHHHHSSC
T ss_pred ccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCC---CCHHHHHHHhc---CchHHHHHHhccchHHHHHHHHHhccC
Confidence 458999999999999987752268889999999987 34333322221 111 11222333444433
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc-h
Q 019086 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-S 230 (346)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~-f 230 (346)
+..+. +..+.......+.+... ....++||+.++|+.|+++|++++++|| +....++.+++.+|+..+ |
T Consensus 86 --~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~tn---~~~~~~~~~l~~~~~~~~~~ 155 (277)
T 3iru_A 86 --SNEED----IKRLYDLFAPIQTRIVA-QRSQLIPGWKEVFDKLIAQGIKVGGNTG---YGPGMMAPALIAAKEQGYTP 155 (277)
T ss_dssp --CCHHH----HHHHHHHHHHHHHHHHH-HTCCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHHHTTCCC
T ss_pred --CCHHH----HHHHHHHHHHHHHHHhh-ccCccCcCHHHHHHHHHHcCCeEEEEeC---CchHHHHHHHHhcCcccCCC
Confidence 22122 33344444444444442 2367899999999999999999999999 667888999999998877 5
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+..+ +. +.+.. .||+|.+ |+.++
T Consensus 156 ~~~~-~~--------------~~~~~----------------------------~kp~~~~--------------~~~~~ 178 (277)
T 3iru_A 156 ASTV-FA--------------TDVVR----------------------------GRPFPDM--------------ALKVA 178 (277)
T ss_dssp SEEE-CG--------------GGSSS----------------------------CTTSSHH--------------HHHHH
T ss_pred ceEe-cH--------------HhcCC----------------------------CCCCHHH--------------HHHHH
Confidence 5532 22 12222 2677776 99999
Q ss_pred HHcCCCC-CcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 311 EYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 311 e~lgv~p-~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+++|++| ++|++|||+.+||.||+++||.+|+|.++
T Consensus 179 ~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 179 LELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp HHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred HHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 9999999 99999999999999999999999999764
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=190.17 Aligned_cols=188 Identities=14% Similarity=0.164 Sum_probs=133.8
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhh--------------ccCCh-HH----HHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK--------------SAGDE-DR----MLVLF 144 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~--------------~~g~~-~~----~~~~~ 144 (346)
+|+|+||+||||+++... +..++.+++.++|++ ++...+...+.. ..|.. .. .....
T Consensus 1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLE---VEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQT 76 (263)
T ss_dssp CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHH
Confidence 479999999999998775 668999999999997 555444333311 01111 11 12223
Q ss_pred HHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh
Q 019086 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (346)
Q Consensus 145 ~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l 224 (346)
+...+.. . ...+.......+..+.....+.++||+.++|+.|+++|++++|+|| +.. .+..+++.+
T Consensus 77 ~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn---~~~-~~~~~l~~~ 142 (263)
T 3k1z_A 77 FHLAGVQ---D-------AQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISN---FDR-RLEGILGGL 142 (263)
T ss_dssp HHHTTCC---C-------HHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEES---CCT-THHHHHHHT
T ss_pred HHHcCCC---C-------HHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeC---CcH-HHHHHHHhC
Confidence 3333331 1 1123333444444444323457999999999999999999999999 334 368899999
Q ss_pred CcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHH
Q 019086 225 GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVA 304 (346)
Q Consensus 225 gl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~ 304 (346)
|+..+|+..+.+. +. ...||+|.+
T Consensus 143 gl~~~f~~~~~~~-~~------------------------------------------~~~Kp~~~~------------- 166 (263)
T 3k1z_A 143 GLREHFDFVLTSE-AA------------------------------------------GWPKPDPRI------------- 166 (263)
T ss_dssp TCGGGCSCEEEHH-HH------------------------------------------SSCTTSHHH-------------
T ss_pred CcHHhhhEEEeec-cc------------------------------------------CCCCCCHHH-------------
Confidence 9999887754332 21 123788887
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|++|++|++|||+. +|+.||+++||.+|++.++
T Consensus 167 -~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~ 208 (263)
T 3k1z_A 167 -FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP 208 (263)
T ss_dssp -HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCS
T ss_pred -HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCC
Confidence 9999999999999999999997 9999999999999998753
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-23 Score=183.63 Aligned_cols=190 Identities=15% Similarity=0.247 Sum_probs=134.4
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhc---------cCC--hHH----HHHHHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGD--EDR----MLVLFFN 146 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~---------~g~--~~~----~~~~~~~ 146 (346)
|.+|+|+||+||||+++... +..++.++++++|++....+...+...+... .+. ... ....+..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ 81 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 56899999999999998875 6788899999999872111333332222110 000 001 1223344
Q ss_pred HhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc
Q 019086 147 RIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (346)
Q Consensus 147 ~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl 226 (346)
..+.+ . ..........|.... .....++||+.++|+.|+ +|++++++|| +....++..++.+|+
T Consensus 82 ~~~~~---~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~g~~~~i~sn---~~~~~~~~~l~~~~l 145 (240)
T 3qnm_A 82 AVGVE---D--------EALAERFSEDFFAII-PTKSGLMPHAKEVLEYLA-PQYNLYILSN---GFRELQSRKMRSAGV 145 (240)
T ss_dssp HTTCC---C--------HHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHT-TTSEEEEEEC---SCHHHHHHHHHHHTC
T ss_pred HcCCC---c--------HHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHH-cCCeEEEEeC---CchHHHHHHHHHcCh
Confidence 44443 1 123334444454444 234678999999999999 9999999999 667888999999999
Q ss_pred ccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHH
Q 019086 227 ERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 306 (346)
Q Consensus 227 ~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~ 306 (346)
..+|+..+.+. .+. ..||+|.+ |
T Consensus 146 ~~~f~~~~~~~---------------~~~----------------------------~~kp~~~~--------------~ 168 (240)
T 3qnm_A 146 DRYFKKIILSE---------------DLG----------------------------VLKPRPEI--------------F 168 (240)
T ss_dssp GGGCSEEEEGG---------------GTT----------------------------CCTTSHHH--------------H
T ss_pred HhhceeEEEec---------------cCC----------------------------CCCCCHHH--------------H
Confidence 98887654332 111 12677666 9
Q ss_pred HHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 307 RAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 307 ~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
+.+++++|++|++|++|||+. +|+.||+++|+.++++.+
T Consensus 169 ~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~ 208 (240)
T 3qnm_A 169 HFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNV 208 (240)
T ss_dssp HHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred HHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcC
Confidence 999999999999999999996 999999999999999875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=181.04 Aligned_cols=185 Identities=16% Similarity=0.200 Sum_probs=131.9
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhc--------cCC--hHH----HHHHHHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGD--EDR----MLVLFFNR 147 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~--------~g~--~~~----~~~~~~~~ 147 (346)
|.+|+|+||+||||+++... +..++.++++++|++ ............. .+. ... ....+...
T Consensus 5 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIP---LTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKE 80 (238)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCC---cchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 46899999999999998875 678899999999998 3333322222110 000 001 11122333
Q ss_pred hCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 148 IGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 148 ~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
++.+.. .......|.+.. .....++||+.++|+.|+++ ++++++|| +....++..++.+|+.
T Consensus 81 ~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 81 YGYEAD-------------GALLEQKYRRFL-EEGHQLIDGAFDLISNLQQQ-FDLYIVTN---GVSHTQYKRLRDSGLF 142 (238)
T ss_dssp TTCCCC-------------HHHHHHHHHHHH-TTCCCBCTTHHHHHHHHHTT-SEEEEEEC---SCHHHHHHHHHHTTCG
T ss_pred cCCCCc-------------HHHHHHHHHHHH-HhcCCCCccHHHHHHHHHhc-CeEEEEeC---CCHHHHHHHHHHcChH
Confidence 333211 022333444444 33467999999999999999 99999999 6678889999999999
Q ss_pred cchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHH
Q 019086 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 307 (346)
Q Consensus 228 ~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~ 307 (346)
.+|+..+.+. .+. ..||+|.+ |+
T Consensus 143 ~~f~~~~~~~---------------~~~----------------------------~~kp~~~~--------------~~ 165 (238)
T 3ed5_A 143 PFFKDIFVSE---------------DTG----------------------------FQKPMKEY--------------FN 165 (238)
T ss_dssp GGCSEEEEGG---------------GTT----------------------------SCTTCHHH--------------HH
T ss_pred hhhheEEEec---------------ccC----------------------------CCCCChHH--------------HH
Confidence 9887654332 111 12777776 99
Q ss_pred HHHHHcC-CCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 308 AGAEYAE-KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 308 ~~~e~lg-v~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
.+++++| ++|++|++|||+. +|+.||+++|+.+|++.+
T Consensus 166 ~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~ 205 (238)
T 3ed5_A 166 YVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNP 205 (238)
T ss_dssp HHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred HHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECC
Confidence 9999999 9999999999998 999999999999999865
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=184.25 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=128.9
Q ss_pred CCceEEEEeccCccccccccccHHHH-HHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAF-NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~-~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
+.+|+|+||+||||+++... +..++ .++++++|++...+ ....+.. ....+....+. .
T Consensus 23 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~---------~~~~g~~--~~~~~~~~~~~-------~-- 81 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNIDL---------DSIPNST--IPKYLITLLGK-------R-- 81 (231)
T ss_dssp CCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCCC---------TTSCTTT--HHHHHHHHHGG-------G--
T ss_pred CCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHHH---------HHHhCcc--HHHHHHHHhCc-------h--
Confidence 45799999999999998875 55777 99999999873111 1111211 11112221111 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
.......+...+..........++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+..+.+.
T Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~~~~--- 153 (231)
T 3kzx_A 82 --WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSN---KNGERLRSEIHHKNLTHYFDSIIGSG--- 153 (231)
T ss_dssp --HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEET---
T ss_pred --HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHCCchhheeeEEccc---
Confidence 1122222333332111134577899999999999999999999999 67788999999999998877643322
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC-c
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR-N 319 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~-e 319 (346)
.+..+ ||+|.+ |+.+++++|++|+ +
T Consensus 154 ------------~~~~~----------------------------Kp~~~~--------------~~~~~~~lgi~~~~~ 179 (231)
T 3kzx_A 154 ------------DTGTI----------------------------KPSPEP--------------VLAALTNINIEPSKE 179 (231)
T ss_dssp ------------SSSCC----------------------------TTSSHH--------------HHHHHHHHTCCCSTT
T ss_pred ------------ccCCC----------------------------CCChHH--------------HHHHHHHcCCCcccC
Confidence 22222 777777 9999999999999 9
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|||+.+|+.||+++|+.+|++.+
T Consensus 180 ~v~vGD~~~Di~~a~~aG~~~v~~~~ 205 (231)
T 3kzx_A 180 VFFIGDSISDIQSAIEAGCLPIKYGS 205 (231)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred EEEEcCCHHHHHHHHHCCCeEEEECC
Confidence 99999999999999999999999864
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=183.89 Aligned_cols=192 Identities=14% Similarity=0.180 Sum_probs=132.1
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHH-cCCCCCCCChHHHHHHHhhccCCh-HHHHHHHHHHhCCCCCCCChhH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~-~gi~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
|.+|+|+||+||||+++... +..++.+++.+ +|++. . .. .. ...|.. ......++..++.+. ...
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~---~-~~---~~-~~~g~~~~~~~~~~~~~~~~~~----~~~ 68 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEG---S-TG---SH-DFSGKMDGAIIYEVLSNVGLER----AEI 68 (234)
T ss_dssp -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCC---C-C-------CCTTCCHHHHHHHHHHTTTCCH----HHH
T ss_pred CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCC---c-cc---hh-hhcCCChHHHHHHHHHHcCCCc----ccc
Confidence 45799999999999999886 67888999888 78873 2 11 11 222333 333445555555421 100
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhC-CCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh
Q 019086 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (346)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~-Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (346)
...+..+...+...+.+.+......++||+.++|+.|+++ |++++|+|| +....+...++.+|+..+|+..+.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~- 144 (234)
T 2hcf_A 69 ADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTG---NFEASGRHKLKLPGIDHYFPFGAFAD- 144 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECS---SCHHHHHHHHHTTTCSTTCSCEECTT-
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcC---CcHHHHHHHHHHCCchhhcCcceecC-
Confidence 1112233333334443333113356899999999999999 999999999 66788899999999998887543222
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KP 316 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~ 316 (346)
+ +. ...||.+.+ |+.+++++| ++
T Consensus 145 ~--------------~~---------------------------~~~k~~~~~--------------~~~~~~~lg~~~~ 169 (234)
T 2hcf_A 145 D--------------AL---------------------------DRNELPHIA--------------LERARRMTGANYS 169 (234)
T ss_dssp T--------------CS---------------------------SGGGHHHHH--------------HHHHHHHHCCCCC
T ss_pred C--------------Cc---------------------------CccchHHHH--------------HHHHHHHhCCCCC
Confidence 1 10 001344444 999999999 99
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 317 VRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 317 p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|++|||+.+|+.||+++|+.+|+|.+
T Consensus 170 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~ 198 (234)
T 2hcf_A 170 PSQIVIIGDTEHDIRCARELDARSIAVAT 198 (234)
T ss_dssp GGGEEEEESSHHHHHHHHTTTCEEEEECC
T ss_pred cccEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence 99999999999999999999999999875
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=9.6e-23 Score=176.76 Aligned_cols=184 Identities=17% Similarity=0.192 Sum_probs=128.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||+++... +..++.++++++|+. +.........+. .....+...+.....+ .
T Consensus 2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~--~~~~~~~~~~~~~~~~----~------ 65 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFK--YSVQDLLVRVAEDRNL----D------ 65 (207)
T ss_dssp --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHH--SCHHHHHHHHHHHHTC----C------
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHcc--ccHHHHHHHhhchhhc----c------
Confidence 45789999999999998875 667888999999886 444444444430 1223333333222221 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
..........+.+.+ .....++|++.++|+.|+++|++++++|| +...... .++.+|+..+|+..+.+.
T Consensus 66 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~-~~~~~~~~~~f~~~~~~~---- 134 (207)
T 2go7_A 66 --VEVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTH---KGNNAFT-ILKDLGVESYFTEILTSQ---- 134 (207)
T ss_dssp --HHHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECS---SCTHHHH-HHHHHTCGGGEEEEECGG----
T ss_pred --HHHHHHHHHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeC---CchHHHH-HHHHcCchhheeeEEecC----
Confidence 122222233333222 23456899999999999999999999999 5667777 889999988776543222
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
.+. ..||++.+ |+.+++++|+++++|+
T Consensus 135 -----------~~~----------------------------~~Kp~~~~--------------~~~~~~~~~i~~~~~~ 161 (207)
T 2go7_A 135 -----------SGF----------------------------VRKPSPEA--------------ATYLLDKYQLNSDNTY 161 (207)
T ss_dssp -----------GCC----------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEE
T ss_pred -----------cCC----------------------------CCCCCcHH--------------HHHHHHHhCCCcccEE
Confidence 111 12666666 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|++||+.+|+.+|++.+
T Consensus 162 ~iGD~~nDi~~~~~aG~~~i~~~~ 185 (207)
T 2go7_A 162 YIGDRTLDVEFAQNSGIQSINFLE 185 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEESSC
T ss_pred EECCCHHHHHHHHHCCCeEEEEec
Confidence 999999999999999999998875
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-23 Score=184.90 Aligned_cols=189 Identities=14% Similarity=0.132 Sum_probs=127.3
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCCh-HHHHHHHhhc--c-CChHHHHHHHHHHh-CCCCCCCChh
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKS--A-GDEDRMLVLFFNRI-GWPTSVPTNE 158 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~-~~~~~~~~~~--~-g~~~~~~~~~~~~~-g~~~~~~~~~ 158 (346)
+|+|+|||||||+++... +..++.+++.+++.....+.. ..+..+.... . .........+...+ +... ..
T Consensus 2 ~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~ 76 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYN----PK 76 (241)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCC----HH
T ss_pred ccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCcc----ch
Confidence 689999999999998876 667888888876421001222 2222221100 0 00011122334444 4321 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh
Q 019086 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (346)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (346)
.+. ...+.|.+... ....++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+..+.+.
T Consensus 77 ---~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~- 144 (241)
T 2hoq_A 77 ---WIS----AGVIAYHNTKF-AYLREVPGARKVLIRLKELGYELGIITD---GNPVKQWEKILRLELDDFFEHVIISD- 144 (241)
T ss_dssp ---HHH----HHHHHHHHHHH-HHCCBCTTHHHHHHHHHHHTCEEEEEEC---SCHHHHHHHHHHTTCGGGCSEEEEGG-
T ss_pred ---HHH----HHHHHHHHHHH-hhCCCCccHHHHHHHHHHCCCEEEEEEC---CCchhHHHHHHHcCcHhhccEEEEeC-
Confidence 111 22223333221 1245899999999999999999999999 66788899999999998887654332
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
.+. ..||+|.+ |+.+++++|++|+
T Consensus 145 --------------~~~----------------------------~~Kp~~~~--------------~~~~~~~~g~~~~ 168 (241)
T 2hoq_A 145 --------------FEG----------------------------VKKPHPKI--------------FKKALKAFNVKPE 168 (241)
T ss_dssp --------------GGT----------------------------CCTTCHHH--------------HHHHHHHHTCCGG
T ss_pred --------------CCC----------------------------CCCCCHHH--------------HHHHHHHcCCCcc
Confidence 111 12777777 9999999999999
Q ss_pred cEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|||+. +|+.||+++||.+++|++
T Consensus 169 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~ 196 (241)
T 2hoq_A 169 EALMVGDRLYSDIYGAKRVGMKTVWFRY 196 (241)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred cEEEECCCchHhHHHHHHCCCEEEEECC
Confidence 999999998 999999999999999865
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-23 Score=182.07 Aligned_cols=182 Identities=13% Similarity=0.143 Sum_probs=131.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||+++... +..++.++++++|++ ++...+....+. .... +...++.+. .+.
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~---~~~~----~~~~~~~~~----~~~-- 64 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFPM---AAEQ----AMTELGIAA----SEF-- 64 (209)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTTS---CHHH----HHHHTTCCG----GGH--
T ss_pred CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHcCC---cHHH----HHHHcCCCH----HHH--
Confidence 56789999999999998875 678889999999985 455544444321 2222 233444321 121
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
..........+... .....++||+.++|+.|+++ ++++|+|| +....++.+++.+|+..+|+..+.+. +
T Consensus 65 --~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~-~-- 133 (209)
T 2hdo_A 65 --DHFQAQYEDVMASH--YDQIELYPGITSLFEQLPSE-LRLGIVTS---QRRNELESGMRSYPFMMRMAVTISAD-D-- 133 (209)
T ss_dssp --HHHHHHHHHHHTTC--GGGCEECTTHHHHHHHSCTT-SEEEEECS---SCHHHHHHHHTTSGGGGGEEEEECGG-G--
T ss_pred --HHHHHHHHHHHhhh--cccCCcCCCHHHHHHHHHhc-CcEEEEeC---CCHHHHHHHHHHcChHhhccEEEecC-c--
Confidence 12222222222111 13466899999999999999 99999999 66788899999999988877643222 1
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
+. ..||+|.+ |+.+++++|++|++|+
T Consensus 134 ------------~~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 134 ------------TP----------------------------KRKPDPLP--------------LLTALEKVNVAPQNAL 159 (209)
T ss_dssp ------------SS----------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred ------------CC----------------------------CCCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 11 12777777 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|+.+|+.+|+.++++.+
T Consensus 160 ~vGD~~~Di~~a~~aG~~~~~~~~ 183 (209)
T 2hdo_A 160 FIGDSVSDEQTAQAANVDFGLAVW 183 (209)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGG
T ss_pred EECCChhhHHHHHHcCCeEEEEcC
Confidence 999999999999999999999863
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=176.83 Aligned_cols=186 Identities=17% Similarity=0.247 Sum_probs=131.5
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCC-hHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
+|+|+||+||||+++... +..++.++++++|+. .++...+ ....|. .......+....+.+ ++.+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~--~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~--~~~~~---- 68 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGIN--GVDRQFN----EQLKGVSREDSLQKILDLADKK--VSAEE---- 68 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCC--CCSHHHH----TTTTTCCHHHHHHHHHHHTTCC--CCHHH----
T ss_pred CcEEEECCCCcccCChHH-HHHHHHHHHHHcCCC--CCCHHHH----HHhCCCCHHHHHHHHHHHhCCC--CChHH----
Confidence 689999999999998875 668889999999886 1332222 222333 233444555555532 22222
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 163 VKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
+..+.......+...... ....++||+.++++.|+++|++++++|| + ......++.+|+..+|+..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~--~~~~~~l~~~~l~~~f~~~~~~----- 138 (221)
T 2wf7_A 69 FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA---S--KNGPFLLERMNLTGYFDAIADP----- 138 (221)
T ss_dssp HHHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCC---C--TTHHHHHHHTTCGGGCSEECCT-----
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcC---c--HHHHHHHHHcChHHHcceEecc-----
Confidence 223333444444444322 1356889999999999999999999999 3 4567788889998877654322
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
+.+.. .||+|.+ |+.+++++|++|++|+
T Consensus 139 ----------~~~~~----------------------------~Kp~~~~--------------~~~~~~~lgi~~~~~i 166 (221)
T 2wf7_A 139 ----------AEVAA----------------------------SKPAPDI--------------FIAAAHAVGVAPSESI 166 (221)
T ss_dssp ----------TTSSS----------------------------CTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred ----------ccCCC----------------------------CCCChHH--------------HHHHHHHcCCChhHeE
Confidence 22211 2677766 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEec
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+|||+.+|++||+.+|+.++++.
T Consensus 167 ~iGD~~nDi~~a~~aG~~~~~~~ 189 (221)
T 2wf7_A 167 GLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEES
T ss_pred EEeCCHHHHHHHHHCCCEEEEEC
Confidence 99999999999999999999875
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=178.87 Aligned_cols=184 Identities=13% Similarity=0.087 Sum_probs=127.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHh--------hc-cC-ChH---HHHHHHHHHhCC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------KS-AG-DED---RMLVLFFNRIGW 150 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~--------~~-~g-~~~---~~~~~~~~~~g~ 150 (346)
+|+|+||+||||+++... +..++.++++++|+.. .......+.. .. +| ... .+...+...++.
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 79 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHI---KDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV 79 (235)
T ss_dssp CCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCC---cHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCC
Confidence 689999999999998875 6678889999999872 2111111111 00 11 112 233344444443
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc---hhHHHHHHHHhCcc
Q 019086 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---DRIARSVVEKLGSE 227 (346)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~---~~~~~~~l~~lgl~ 227 (346)
+. .. ...+. ..+.... .. ..++||+.++|+.|+++|++++++|| +. ...++..++.+|+.
T Consensus 80 ~~----~~----~~~~~----~~~~~~~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 80 DV----EL----VKRAT----ARAILNV-DE-SLVLEGTKEALQFVKERGLKTAVIGN---VMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp CH----HH----HHHHH----HHHHHHC-CG-GGBCTTHHHHHHHHHHTTCEEEEEEC---CCSSCHHHHHHHHHHTTCG
T ss_pred CH----HH----HHHHH----HHHHHhc-cc-cCcCccHHHHHHHHHHCCCEEEEEcC---CcccchhHHHHHHHhCCcH
Confidence 21 11 11111 1222222 11 23699999999999999999999999 55 67788899999999
Q ss_pred cchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHH
Q 019086 228 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 307 (346)
Q Consensus 228 ~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~ 307 (346)
.+|+..+.+. +. ...||+|.+ |+
T Consensus 143 ~~f~~~~~~~-~~------------------------------------------~~~kp~~~~--------------~~ 165 (235)
T 2om6_A 143 EFIDKTFFAD-EV------------------------------------------LSYKPRKEM--------------FE 165 (235)
T ss_dssp GGCSEEEEHH-HH------------------------------------------TCCTTCHHH--------------HH
T ss_pred HHhhhheecc-cc------------------------------------------CCCCCCHHH--------------HH
Confidence 8887654332 11 123777777 99
Q ss_pred HHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 308 AGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 308 ~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
.+++++|++|++|++|||+. +|++||+.+|+.++++.+
T Consensus 166 ~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~ 204 (235)
T 2om6_A 166 KVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQ 204 (235)
T ss_dssp HHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECT
T ss_pred HHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECC
Confidence 99999999999999999999 999999999999999865
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.9e-23 Score=183.67 Aligned_cols=183 Identities=13% Similarity=0.187 Sum_probs=133.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|+||+||||+++... +..++.++++++|++ +....+.... |.... ..+...++.+ ... +
T Consensus 29 ik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~----g~~~~--~~~~~~~~~~----~~~----~ 90 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIK---EDLENLDQFI----GPPLH--DTFKEYYKFE----DKK----A 90 (240)
T ss_dssp CSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCC---CCGGGGGGGS----SSCHH--HHHHHTSCCC----HHH----H
T ss_pred ccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHh----CccHH--HHHHHHhCCC----HHH----H
Confidence 699999999999998875 678899999999987 3333322222 22211 1223333322 111 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
..+.....+.+.... .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+.+.
T Consensus 91 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~------ 160 (240)
T 3sd7_A 91 KEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATS---KPTVFAETILRYFDIDRYFKYIAGSN------ 160 (240)
T ss_dssp HHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEEC------
T ss_pred HHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHcCcHhhEEEEEecc------
Confidence 333344444444432 23467999999999999999999999999 67888999999999998887643222
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC-CCcEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFL 322 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~-p~e~i~ 322 (346)
.+.. .||+|.+ |+.+++++|++ |++|++
T Consensus 161 ---------~~~~----------------------------~kp~~~~--------------~~~~~~~~g~~~~~~~i~ 189 (240)
T 3sd7_A 161 ---------LDGT----------------------------RVNKNEV--------------IQYVLDLCNVKDKDKVIM 189 (240)
T ss_dssp ---------TTSC----------------------------CCCHHHH--------------HHHHHHHHTCCCGGGEEE
T ss_pred ---------ccCC----------------------------CCCCHHH--------------HHHHHHHcCCCCCCcEEE
Confidence 1111 2666666 99999999999 999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+|+.||+.+|+.+|+|.+
T Consensus 190 vGD~~~Di~~a~~aG~~~i~v~~ 212 (240)
T 3sd7_A 190 VGDRKYDIIGAKKIGIDSIGVLY 212 (240)
T ss_dssp EESSHHHHHHHHHHTCEEEEESS
T ss_pred ECCCHHHHHHHHHCCCCEEEEeC
Confidence 99999999999999999999874
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=176.96 Aligned_cols=187 Identities=18% Similarity=0.242 Sum_probs=130.5
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCC-hHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
.+|+|+||+||||+++... +..++.++++++|++. ..... +....|. .......+....++... ..
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~--~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~----~~-- 74 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRRNE----LPDTLGLRIDMVVDLWYARQPWNGP----SR-- 74 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCG--GGGGG----SCCCTTCCHHHHHHHHHHHSCCSSS----CH--
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCC--ChHHH----HHHHhCCCHHHHHHHHHHHcCCCcc----CH--
Confidence 3789999999999998875 6678889999999873 10111 1112222 23344445555554321 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
..+.......+.+.+ .....++|++.++|+.|++.|++++++|| +....++..++.+|+..+|+..+.+.
T Consensus 75 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~~~~~~~~~~~~~---- 144 (226)
T 1te2_A 75 --QEVVERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASA---SPLHMLEKVLTMFDLRDSFDALASAE---- 144 (226)
T ss_dssp --HHHHHHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEECT----
T ss_pred --HHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHhcCcHhhCcEEEecc----
Confidence 122222222232222 11256899999999999999999999999 66778889999999988776543222
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
.+.. .||++.. |+.+++++|+++++|+
T Consensus 145 -----------~~~~----------------------------~kp~~~~--------------~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 145 -----------KLPY----------------------------SKPHPQV--------------YLDCAAKLGVDPLTCV 171 (226)
T ss_dssp -----------TSSC----------------------------CTTSTHH--------------HHHHHHHHTSCGGGEE
T ss_pred -----------ccCC----------------------------CCCChHH--------------HHHHHHHcCCCHHHeE
Confidence 1111 1566655 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|++||+.+|+.++++.+
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~ 195 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPA 195 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCC
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcC
Confidence 999999999999999999999765
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=185.47 Aligned_cols=193 Identities=13% Similarity=0.159 Sum_probs=125.6
Q ss_pred CCCCCCceEEEEeccCccccccccccHHHHHHHHHH----cCCCCCCCChHHHHHHHhhccC--------ChHHHHH---
Q 019086 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK----LGLDCANWTAPIYTDLLRKSAG--------DEDRMLV--- 142 (346)
Q Consensus 78 ~~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~----~gi~~~~~~~~~~~~~~~~~~g--------~~~~~~~--- 142 (346)
+.+.+++|+|+||+||||+|+... +..++.+++++ +|++. -....+........+ ....+..
T Consensus 12 ~~~~~~~k~viFDlDGTLvds~~~-~~~a~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (260)
T 2gfh_A 12 HMGLSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKE--EAEIICDKVQVKLSKECFHPYSTCITDVRTSHW 88 (260)
T ss_dssp CEECCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCT--HHHHHHHHHHHHHHTCCCC----CHHHHHHHHH
T ss_pred hcccccceEEEEcCCCCCCCCHHH-HHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHhhccccccccHHHHHHHHH
Confidence 344567899999999999999885 66788887764 56651 001111111111100 1111110
Q ss_pred -HHHHH-hCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHH
Q 019086 143 -LFFNR-IGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV 220 (346)
Q Consensus 143 -~~~~~-~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~ 220 (346)
..... .+.. . . . .........|.... ....+++||+.++|+.|++ +++++|+|| +....++.+
T Consensus 89 ~~~~~~~~~~~-~-~----~----~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn---~~~~~~~~~ 153 (260)
T 2gfh_A 89 EEAIQETKGGA-D-N----R----KLAEECYFLWKSTR-LQHMILADDVKAMLTELRK-EVRLLLLTN---GDRQTQREK 153 (260)
T ss_dssp HHHHHHHHCSS-C-C----H----HHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHT-TSEEEEEEC---SCHHHHHHH
T ss_pred HHHHHHhcCcc-c-h----H----HHHHHHHHHHHHHH-HhcCCCCcCHHHHHHHHHc-CCcEEEEEC---cChHHHHHH
Confidence 11111 1111 0 0 0 11111222222221 1236799999999999998 599999999 667888999
Q ss_pred HHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhH
Q 019086 221 VEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLD 300 (346)
Q Consensus 221 l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~ 300 (346)
++.+|+..+|+..+.+.+ +. ..||+|++
T Consensus 154 l~~~gl~~~f~~i~~~~~---------------~~----------------------------~~KP~p~~--------- 181 (260)
T 2gfh_A 154 IEACACQSYFDAIVIGGE---------------QK----------------------------EEKPAPSI--------- 181 (260)
T ss_dssp HHHHTCGGGCSEEEEGGG---------------SS----------------------------SCTTCHHH---------
T ss_pred HHhcCHHhhhheEEecCC---------------CC----------------------------CCCCCHHH---------
Confidence 999999998876543321 11 12788887
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCC-CEEEecC
Q 019086 301 KIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGM-PCVVMRS 345 (346)
Q Consensus 301 ~~~~~~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~-~~i~v~~ 345 (346)
|+.+++++|++|++|+||||+ .+||.+|+++|| .+|++.+
T Consensus 182 -----~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~ 223 (260)
T 2gfh_A 182 -----FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINK 223 (260)
T ss_dssp -----HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred -----HHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcC
Confidence 999999999999999999996 899999999999 7998864
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=187.99 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=86.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh---CcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l---gl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
...++||+.++|+.|+++|++++|+|| +....++.+++.+ |+.++|+..+ +. + +.
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn---~~~~~~~~~l~~~~~~~l~~~fd~i~-~~-~--------------~~--- 185 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSS---GSVEAQKLLFGHSTEGDILELVDGHF-DT-K--------------IG--- 185 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHTBTTBCCGGGCSEEE-CG-G--------------GC---
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeC---CCHHHHHHHHHhhcccChHhhccEEE-ec-C--------------CC---
Confidence 467999999999999999999999999 6677788888854 5888777642 22 1 11
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
.||+|++ |+.+++++|++|++|+||||+.+||.+|+++||
T Consensus 186 --------------------------~KP~p~~--------------~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 186 --------------------------HKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp --------------------------CTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred --------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCC
Confidence 2888888 999999999999999999999999999999999
Q ss_pred CEEEecC
Q 019086 339 PCVVMRS 345 (346)
Q Consensus 339 ~~i~v~~ 345 (346)
.+|+|.+
T Consensus 226 ~~i~v~~ 232 (261)
T 1yns_A 226 HVAVVVR 232 (261)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999864
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=7e-22 Score=179.46 Aligned_cols=186 Identities=12% Similarity=-0.026 Sum_probs=127.2
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHH---HHcCCCCC-CCChHHHHHHH---hhccCChHHHHHHHH----HHhCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLDCA-NWTAPIYTDLL---RKSAGDEDRMLVLFF----NRIGW 150 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~---~~~gi~~~-~~~~~~~~~~~---~~~~g~~~~~~~~~~----~~~g~ 150 (346)
|.+|+|+||+||||+|+... +..++.+++ .++|++.. .+......... ...+.....+...+. ...+.
T Consensus 11 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA 89 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred CceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence 45799999999999998875 667777776 46777620 01211111111 112222333332222 22222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 151 PTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
. .. . .......+.+.+.+ .....++||+.++|+.|+ +|++++++|| +....+...++.+|+..+|
T Consensus 90 ~--~~-~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~---~~~~~~~~~l~~~~l~~~f 154 (251)
T 2pke_A 90 R--IE-A-------RDIQRIVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITK---GDLFHQEQKIEQSGLSDLF 154 (251)
T ss_dssp C--CC-H-------HHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEE---SCHHHHHHHHHHHSGGGTC
T ss_pred C--CC-h-------HHHHHHHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeC---CCHHHHHHHHHHcCcHHhC
Confidence 1 11 0 22223333444443 345678999999999999 9999999999 6677888999999999887
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+..+.+. ||+|.+ |+.++
T Consensus 155 ~~i~~~~------------------------------------------------kp~~~~--------------~~~~~ 172 (251)
T 2pke_A 155 PRIEVVS------------------------------------------------EKDPQT--------------YARVL 172 (251)
T ss_dssp CCEEEES------------------------------------------------CCSHHH--------------HHHHH
T ss_pred ceeeeeC------------------------------------------------CCCHHH--------------HHHHH
Confidence 7543211 677766 99999
Q ss_pred HHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 311 EYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 311 e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
+++|++|++|++|||+. +|+.+|+++|+.+|+|++
T Consensus 173 ~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~ 208 (251)
T 2pke_A 173 SEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPY 208 (251)
T ss_dssp HHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCC
T ss_pred HHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECC
Confidence 99999999999999999 999999999999999865
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=175.62 Aligned_cols=188 Identities=14% Similarity=0.135 Sum_probs=130.5
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.|.+|+|+||+||||+++... +..++.++++++|.+. .+...+....+ .........+ .+.. . .
T Consensus 3 ~M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~---~~~~---~-~--- 66 (225)
T 3d6j_A 3 AMKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTG--ITDDMIKRTIG---KTLEESFSIL---TGIT---D-A--- 66 (225)
T ss_dssp --CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHTTTT---SCHHHHHHHH---HCCC---C-H---
T ss_pred CCCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhC---CcHHHHHHHH---cCCC---C-H---
Confidence 366899999999999998875 6688899999999872 33333332221 1222222222 2221 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
..+..+.......+...+ .....++|++.++++.|+++|++++++|| +........++.+|+..+|+..+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~--- 139 (225)
T 3d6j_A 67 DQLESFRQEYSKEADIYM-NANTILFPDTLPTLTHLKKQGIRIGIIST---KYRFRILSFLRNHMPDDWFDIIIGGE--- 139 (225)
T ss_dssp HHHHHHHHHHHHHHHHHT-GGGCEECTTHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHTSSCTTCCSEEECGG---
T ss_pred HHHHHHHHHHHHHHHHhc-cccCccCcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHcCchhheeeeeehh---
Confidence 112233333444444443 23356799999999999999999999999 66778888999999887776533221
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
.+. ..||++.+ |+.+++++|+++++|
T Consensus 140 ------------~~~----------------------------~~k~~~~~--------------~~~~~~~~~~~~~~~ 165 (225)
T 3d6j_A 140 ------------DVT----------------------------HHKPDPEG--------------LLLAIDRLKACPEEV 165 (225)
T ss_dssp ------------GCS----------------------------SCTTSTHH--------------HHHHHHHTTCCGGGE
T ss_pred ------------hcC----------------------------CCCCChHH--------------HHHHHHHhCCChHHe
Confidence 111 11566665 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|||+.+|+.||+.+|+.++++.+
T Consensus 166 i~iGD~~nDi~~~~~aG~~~~~~~~ 190 (225)
T 3d6j_A 166 LYIGDSTVDAGTAAAAGVSFTGVTS 190 (225)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEETT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEECC
Confidence 9999999999999999999999765
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.2e-23 Score=178.60 Aligned_cols=183 Identities=15% Similarity=0.197 Sum_probs=122.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHh-h-ccCChHHHHHHHHHHhCCCCCCCChhH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR-K-SAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
|++|+|+||+||||+++.. ...++.++++++|++. ........... . ..+... . ..+...+.........
T Consensus 2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-- 73 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDT--DDFTERHRLAAPELELGRMT-L-AEYLEQVVFYQPRDFT-- 73 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHTTSSC-H-HHHHHHHTTTSCCSSC--
T ss_pred CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCH--HHHHHHHHhhchHHHcCCcC-H-HHHHHHHHHHcCCCCC--
Confidence 5689999999999999875 3578889999999872 00001111000 0 011100 0 1111111111000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhh
Q 019086 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (346)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e 239 (346)
.+.+.+.+.. ...++||+.++|+.|+++| +++|+|| +....+..+++.+|+..+|+..+.+. +
T Consensus 74 -----------~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g-~~~i~s~---~~~~~~~~~l~~~~~~~~f~~~~~~~-~ 136 (200)
T 3cnh_A 74 -----------PEDFRAVMEE-QSQPRPEVLALARDLGQRY-RMYSLNN---EGRDLNEYRIRTFGLGEFLLAFFTSS-A 136 (200)
T ss_dssp -----------HHHHHHHHHH-TCCBCHHHHHHHHHHTTTS-EEEEEEC---CCHHHHHHHHHHHTGGGTCSCEEEHH-H
T ss_pred -----------HHHHHHHHHh-cCccCccHHHHHHHHHHcC-CEEEEeC---CcHHHHHHHHHhCCHHHhcceEEeec-c
Confidence 0011121111 2448999999999999999 9999999 66788899999999998887643222 1
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
. ...||+|++ |+.+++++|++|++
T Consensus 137 ~------------------------------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~ 160 (200)
T 3cnh_A 137 L------------------------------------------GVMKPNPAM--------------YRLGLTLAQVRPEE 160 (200)
T ss_dssp H------------------------------------------SCCTTCHHH--------------HHHHHHHHTCCGGG
T ss_pred c------------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 1 123777777 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|||+.+|+.+|+.+|+.++++.+
T Consensus 161 ~~~vgD~~~Di~~a~~aG~~~~~~~~ 186 (200)
T 3cnh_A 161 AVMVDDRLQNVQAARAVGMHAVQCVD 186 (200)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEECSC
T ss_pred eEEeCCCHHHHHHHHHCCCEEEEECC
Confidence 99999999999999999999999875
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.6e-22 Score=175.50 Aligned_cols=183 Identities=12% Similarity=0.047 Sum_probs=122.0
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHH-------hhccCChHHH----HHHHHHHhCCCC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL-------RKSAGDEDRM----LVLFFNRIGWPT 152 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~-------~~~~g~~~~~----~~~~~~~~g~~~ 152 (346)
+|+|+||+||||+++... +..++.++.+.+... .........+. ...+.....+ ........+..
T Consensus 8 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPY--GTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGK- 83 (234)
T ss_dssp CCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGG--SCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTC-
T ss_pred ccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCC-
Confidence 799999999999998875 556655554444322 01111111111 1111112221 11122222221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCC-CCEEEEcCCCCCchhHHHHHHHHhCcccchh
Q 019086 153 SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (346)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~G-i~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~ 231 (346)
+.. .......+.+.+.. .....++||+.++++.|+++| ++++++|| +....+...++.+|+.++|+
T Consensus 84 -~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~---~~~~~~~~~l~~~~~~~~f~ 150 (234)
T 3ddh_A 84 -IAA--------DIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATK---GDLLDQENKLERSGLSPYFD 150 (234)
T ss_dssp -CCH--------HHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEE---SCHHHHHHHHHHHTCGGGCS
T ss_pred -CCH--------HHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeC---CchHHHHHHHHHhCcHhhhh
Confidence 111 11222233333443 345779999999999999999 99999999 66778899999999998887
Q ss_pred heecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHH
Q 019086 232 IKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAE 311 (346)
Q Consensus 232 ~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e 311 (346)
..+.+. ||+|.+ |+.+++
T Consensus 151 ~~~~~~------------------------------------------------kpk~~~--------------~~~~~~ 168 (234)
T 3ddh_A 151 HIEVMS------------------------------------------------DKTEKE--------------YLRLLS 168 (234)
T ss_dssp EEEEES------------------------------------------------CCSHHH--------------HHHHHH
T ss_pred eeeecC------------------------------------------------CCCHHH--------------HHHHHH
Confidence 643211 666666 999999
Q ss_pred HcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 312 YAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 312 ~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
++|++|++|++|||+. +|+.||+++|+.+|+|++
T Consensus 169 ~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~ 203 (234)
T 3ddh_A 169 ILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPF 203 (234)
T ss_dssp HHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCC
T ss_pred HhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecC
Confidence 9999999999999997 999999999999999843
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=179.09 Aligned_cols=178 Identities=18% Similarity=0.199 Sum_probs=122.7
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHh------hccC--ChHHHHHHHHHHhCCCCCC
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR------KSAG--DEDRMLVLFFNRIGWPTSV 154 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~------~~~g--~~~~~~~~~~~~~g~~~~~ 154 (346)
.+|+|+||+||||+++.. ..+.+.+.++|++ .....+..... ...| ....+...+.+.++.+...
T Consensus 27 ~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLDR----ERCIENFKKIGFQ---NIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSD 99 (229)
T ss_dssp CCCEEEECSBTTTBCBCH----HHHHHHHHHHTCT---THHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCH
T ss_pred CCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCC---cHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCH
Confidence 469999999999999764 5667888889986 22232222111 0111 2233444444444433110
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHH------HHhCccc
Q 019086 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV------EKLGSER 228 (346)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l------~~lgl~~ 228 (346)
....+.+.... ..++||+.++|+.|+++ ++++|+|| +.......++ +.+|+..
T Consensus 100 -------------~~~~~~~~~~~----~~~~~~~~~~l~~l~~~-~~~~i~Sn---~~~~~~~~~~~~l~~~~~~~l~~ 158 (229)
T 4dcc_A 100 -------------KQIDAAWNSFL----VDIPTYKLDLLLKLREK-YVVYLLSN---TNDIHWKWVCKNAFPYRTFKVED 158 (229)
T ss_dssp -------------HHHHHHHHTTB----CCCCHHHHHHHHHHTTT-SEEEEEEC---CCHHHHHHHHHHTSCBTTBCHHH
T ss_pred -------------HHHHHHHHHHH----HhccHHHHHHHHHHHhc-CcEEEEEC---CChHHHHHHHhhhhhhccCCHHH
Confidence 11122222222 34789999999999999 99999999 6667777555 6678877
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (346)
+|+..+.+. +. ...||+|.+ |+.
T Consensus 159 ~fd~i~~~~-~~------------------------------------------~~~KP~~~~--------------~~~ 181 (229)
T 4dcc_A 159 YFEKTYLSY-EM------------------------------------------KMAKPEPEI--------------FKA 181 (229)
T ss_dssp HCSEEEEHH-HH------------------------------------------TCCTTCHHH--------------HHH
T ss_pred hCCEEEeec-cc------------------------------------------CCCCCCHHH--------------HHH
Confidence 777543222 11 223788887 999
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 309 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 309 ~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++++|++|++|++|||+.+||.+|+++||.+|++.+
T Consensus 182 ~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 182 VTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp HHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred HHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999875
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=174.59 Aligned_cols=167 Identities=17% Similarity=0.144 Sum_probs=120.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||+++... |.++++++|++. .......+... ....
T Consensus 4 ~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~---~~~~~~~~~~~----~~~~--------------------- 50 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPA---EDDILTHLAAL----PADE--------------------- 50 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCT---TSCHHHHHHHS----CHHH---------------------
T ss_pred ccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCc---hHHHHHHHhcC----ChHH---------------------
Confidence 45799999999999997653 356788899873 22222222110 0000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch--hheecchhh
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEE 239 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f--~~~i~~~~e 239 (346)
..........+...+ .....++||+.++|+.|+++|++++++|| +....++..++.+|+..+| +.. ++.+.
T Consensus 51 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~i-~~~~~ 123 (205)
T 3m9l_A 51 --SAAKHAWLLEHERDL-AQGSRPAPGAVELVRELAGRGYRLGILTR---NARELAHVTLEAIGLADCFAEADV-LGRDE 123 (205)
T ss_dssp --HHHHHHHHHHTHHHH-EEEEEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGSCGGGE-ECTTT
T ss_pred --HHHHHHHHHHHHHHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeC---CchHHHHHHHHHcCchhhcCcceE-EeCCC
Confidence 011111222222222 23456899999999999999999999999 6788899999999999888 442 33211
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
. ..||+|.+ |+.+++++|+++++
T Consensus 124 ---------------~----------------------------~~kp~~~~--------------~~~~~~~~g~~~~~ 146 (205)
T 3m9l_A 124 ---------------A----------------------------PPKPHPGG--------------LLKLAEAWDVSPSR 146 (205)
T ss_dssp ---------------S----------------------------CCTTSSHH--------------HHHHHHHTTCCGGG
T ss_pred ---------------C----------------------------CCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 1 12677776 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|||+.+|+.||+.+|+.+|++.+
T Consensus 147 ~i~iGD~~~Di~~a~~aG~~~i~v~~ 172 (205)
T 3m9l_A 147 MVMVGDYRFDLDCGRAAGTRTVLVNL 172 (205)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEECSS
T ss_pred EEEECCCHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999875
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=169.72 Aligned_cols=177 Identities=15% Similarity=0.129 Sum_probs=124.7
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||+++... +..++.++++++|++ ++...+...... .... .+...++.. .
T Consensus 4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~---~~~~---~~~~~~~~~-----~---- 64 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKV---STPF---AIETFAPNL-----E---- 64 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHH---CHHH---HHHHHCTTC-----T----
T ss_pred CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHcc---ccHH---HHHHHhhhH-----H----
Confidence 45799999999999998875 678889999999987 444333333321 1111 122222211 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.......+.+.+.. .... ++||+.++|+.|+++|++++++|| +. ..+...++.+|+..+|+..+.+
T Consensus 65 ---~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~l~~~g~~~~i~t~---~~-~~~~~~l~~~~~~~~f~~~~~~----- 130 (190)
T 2fi1_A 65 ---NFLEKYKENEAREL-EHPI-LFEGVSDLLEDISNQGGRHFLVSH---RN-DQVLEILEKTSIAAYFTEVVTS----- 130 (190)
T ss_dssp ---THHHHHHHHHHHHT-TSCC-BCTTHHHHHHHHHHTTCEEEEECS---SC-THHHHHHHHTTCGGGEEEEECG-----
T ss_pred ---HHHHHHHHHHHHhc-CcCc-cCcCHHHHHHHHHHCCCcEEEEEC---Cc-HHHHHHHHHcCCHhheeeeeec-----
Confidence 11222333333333 2233 899999999999999999999999 43 4678889999998877654322
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
+.+.. .||+|.+ |+.+++++|++ +|+
T Consensus 131 ----------~~~~~----------------------------~kp~~~~--------------~~~~~~~~~~~--~~~ 156 (190)
T 2fi1_A 131 ----------SSGFK----------------------------RKPNPES--------------MLYLREKYQIS--SGL 156 (190)
T ss_dssp ----------GGCCC----------------------------CTTSCHH--------------HHHHHHHTTCS--SEE
T ss_pred ----------cccCC----------------------------CCCCHHH--------------HHHHHHHcCCC--eEE
Confidence 11211 2677776 99999999998 999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+.+|++||+.+|+.++++.+
T Consensus 157 ~iGD~~~Di~~a~~aG~~~~~~~~ 180 (190)
T 2fi1_A 157 VIGDRPIDIEAGQAAGLDTHLFTS 180 (190)
T ss_dssp EEESSHHHHHHHHHTTCEEEECSC
T ss_pred EEcCCHHHHHHHHHcCCeEEEECC
Confidence 999999999999999999999865
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=175.82 Aligned_cols=181 Identities=12% Similarity=0.053 Sum_probs=125.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhcc---------CCh----HHHHHHHHHHh
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---------GDE----DRMLVLFFNRI 148 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~---------g~~----~~~~~~~~~~~ 148 (346)
+.+|+|+||+||||+++... +..++.++++++|++ ++...+...+.... ... ......+..+.
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKT---FTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW 79 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCC---CCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence 45799999999999998875 678889999999987 44444333332110 001 11223344555
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 149 GWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 149 g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.+.. . . ....+.... ....++||+.++|+.|++ |++++++|| +....+...++. +..
T Consensus 80 ~~~~~---~-------~----~~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn---~~~~~~~~~l~~--l~~ 137 (240)
T 3smv_A 80 GLEPD---A-------A----EREEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSN---IDRNEFKLSNAK--LGV 137 (240)
T ss_dssp TCCCC---H-------H----HHHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEES---SCHHHHHHHHTT--TCS
T ss_pred CCCCC---H-------H----HHHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeC---CChhHHHHHHHh--cCC
Confidence 54411 0 1 112222222 236789999999999999 899999999 566777777765 445
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (346)
+|+..+.+. +. ...||+|.+ |+.
T Consensus 138 ~fd~i~~~~-~~------------------------------------------~~~KP~~~~--------------~~~ 160 (240)
T 3smv_A 138 EFDHIITAQ-DV------------------------------------------GSYKPNPNN--------------FTY 160 (240)
T ss_dssp CCSEEEEHH-HH------------------------------------------TSCTTSHHH--------------HHH
T ss_pred ccCEEEEcc-cc------------------------------------------CCCCCCHHH--------------HHH
Confidence 666543222 21 223788887 888
Q ss_pred H---HHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 309 G---AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 309 ~---~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
+ ++++|++|++|++|||+. +|+.||+++|+.++++..
T Consensus 161 ~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 161 MIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp HHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred HHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence 8 899999999999999996 999999999999999863
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-23 Score=183.65 Aligned_cols=183 Identities=15% Similarity=0.174 Sum_probs=123.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCCh--HH------HHHHHHHHhCCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDE--DR------MLVLFFNRIGWPT 152 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~--~~------~~~~~~~~~g~~~ 152 (346)
|++|+|+||+||||+|+... +..++.+++.++|++ .+.. .+..+....+... .. ....+...++.+.
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYD---LDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP 76 (220)
T ss_dssp CCCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCC---CCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC
T ss_pred CCceEEEEcCCCceeccccc-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC
Confidence 46789999999999999876 678899999999987 3433 2233221111000 00 0234445555432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh
Q 019086 153 SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (346)
Q Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (346)
. + ...+...+. ........++||+.++|+.|+++|++++|+|| +.. .++..++.+|+..+|+.
T Consensus 77 --~-~-------~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn---~~~-~~~~~l~~~gl~~~f~~ 139 (220)
T 2zg6_A 77 --S-E-------RLVKELKEA---DIRDGEAFLYDDTLEFLEGLKSNGYKLALVSN---ASP-RVKTLLEKFDLKKYFDA 139 (220)
T ss_dssp --C-H-------HHHHHHHHT---TTTCEEEEECTTHHHHHHHHHTTTCEEEECCS---CHH-HHHHHHHHHTCGGGCSE
T ss_pred --c-H-------HHHHHHHHH---hhcccCceECcCHHHHHHHHHHCCCEEEEEeC---CcH-HHHHHHHhcCcHhHeeE
Confidence 1 1 111111111 11122356899999999999999999999999 444 47889999999998876
Q ss_pred eecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHH
Q 019086 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (346)
Q Consensus 233 ~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~ 312 (346)
.+.+. +. ...||+|.+ |+.++++
T Consensus 140 ~~~~~-~~------------------------------------------~~~Kp~~~~--------------~~~~~~~ 162 (220)
T 2zg6_A 140 LALSY-EI------------------------------------------KAVKPNPKI--------------FGFALAK 162 (220)
T ss_dssp EC------------------------------------------------------CCH--------------HHHHHHH
T ss_pred EEecc-cc------------------------------------------CCCCCCHHH--------------HHHHHHH
Confidence 54332 11 123888888 9999999
Q ss_pred cCCCCCcEEEEcCChh-hHHHHHHcCCCEEEecC
Q 019086 313 AEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 313 lgv~p~e~i~VGDs~~-Di~aA~~aG~~~i~v~~ 345 (346)
+|++| +||||+.+ |+.+|+++||.+|++.+
T Consensus 163 ~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~ 193 (220)
T 2zg6_A 163 VGYPA---VHVGDIYELDYIGAKRSYVDPILLDR 193 (220)
T ss_dssp HCSSE---EEEESSCCCCCCCSSSCSEEEEEBCT
T ss_pred cCCCe---EEEcCCchHhHHHHHHCCCeEEEECC
Confidence 99998 99999998 99999999999999864
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=180.72 Aligned_cols=185 Identities=8% Similarity=0.043 Sum_probs=118.6
Q ss_pred CCceEEEEeccCcccccccc------ccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccC-ChHHHHHHHHHHhCCCCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRF------GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSV 154 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~------~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~~ 154 (346)
+++++|+|||||||+|++.. .+...+.+.+.++|.. ....+.+....+ ....+...+...++...
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~-- 100 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRD------SPVSNILSQFHIDNKEQLQAHILELVAKDV-- 100 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTT------SHHHHHHHTTCCCCHHHHHHHHHHHHHTTC--
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCc------HHHHHHHHHhhhccHHHHHHHHHHHHhccc--
Confidence 34789999999999998642 1234445556666654 222233332222 23444444444443221
Q ss_pred CChhHHHHHHHHH-HHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh--C------
Q 019086 155 PTNEKKAFVKNVL-QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G------ 225 (346)
Q Consensus 155 ~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l--g------ 225 (346)
.... .+.+. ..+...|... ....+++||+.++|+. |++++|+|| +....++.+++.+ |
T Consensus 101 ~~~~----~~~~~~~~~~~~~~~~--~~~~~~~pgv~e~L~~----g~~l~i~Tn---~~~~~~~~~l~~~~~g~~~~~~ 167 (253)
T 2g80_A 101 KDPI----LKQLQGYVWAHGYESG--QIKAPVYADAIDFIKR----KKRVFIYSS---GSVKAQKLLFGYVQDPNAPAHD 167 (253)
T ss_dssp CCHH----HHHHHHHHHHHHHHTT--SCCBCCCHHHHHHHHH----CSCEEEECS---SCHHHHHHHHHSBCCTTCTTSC
T ss_pred chHH----HHHHHHHHHHHHHHhC--cccCCCCCCHHHHHHc----CCEEEEEeC---CCHHHHHHHHHhhccccccccc
Confidence 1111 11111 1222223211 1236789999999988 999999999 6678888888876 4
Q ss_pred ---cccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHH
Q 019086 226 ---SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKI 302 (346)
Q Consensus 226 ---l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~ 302 (346)
+.++|+.. |+..+. ..||+|++
T Consensus 168 ~l~l~~~~~~~-----------f~~~~~---------------------------------g~KP~p~~----------- 192 (253)
T 2g80_A 168 SLDLNSYIDGY-----------FDINTS---------------------------------GKKTETQS----------- 192 (253)
T ss_dssp CBCCGGGCCEE-----------ECHHHH---------------------------------CCTTCHHH-----------
T ss_pred ccchHhhcceE-----------Eeeecc---------------------------------CCCCCHHH-----------
Confidence 55544321 111010 12888888
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 303 VAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 303 ~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+++++|++|++|+||||+.+|+.+|+++||.+|+|.+
T Consensus 193 ---~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 193 ---YANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp ---HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred ---HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999999999999999999865
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-21 Score=170.01 Aligned_cols=182 Identities=18% Similarity=0.190 Sum_probs=129.3
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCC-hHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWT-APIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
.+|+|+||+||||+++... +..++.++++++|.+ +. ...+....+ .....+...+...++.... ...
T Consensus 3 ~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~--~~~--- 70 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFAG---MTWKNILLQVESEASIPLS--ASL--- 70 (229)
T ss_dssp CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHTT---CCHHHHHHHHHHHHCCCCC--THH---
T ss_pred CccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCC---CCHHHHHHHHhC---CCHHHHHHHHHHHcCCCCC--HHH---
Confidence 3689999999999998875 668888999999987 33 233333332 2344455566666665422 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-hheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f-~~~i~~~~e~ 240 (346)
... ..+.+.+.. .....++||+.++++.++. +++++|| +....+...++.+|+..+| +.. ++.++.
T Consensus 71 -~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~~---~~~i~s~---~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 137 (229)
T 2fdr_A 71 -LDK----SEKLLDMRL-ERDVKIIDGVKFALSRLTT---PRCICSN---SSSHRLDMMLTKVGLKPYFAPHI-YSAKDL 137 (229)
T ss_dssp -HHH----HHHHHHHHH-HHHCCBCTTHHHHHHHCCS---CEEEEES---SCHHHHHHHHHHTTCGGGTTTCE-EEHHHH
T ss_pred -HHH----HHHHHHHHh-hcCCccCcCHHHHHHHhCC---CEEEEEC---CChhHHHHHHHhCChHHhccceE-Eecccc
Confidence 112 222222222 1125689999999998875 9999999 6678888999999999888 553 333221
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhh--ccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASML--KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
... ||+|.+ |+.+++++|++|+
T Consensus 138 ------------------------------------------~~~~~kpk~~~--------------~~~~~~~l~~~~~ 161 (229)
T 2fdr_A 138 ------------------------------------------GADRVKPKPDI--------------FLHGAAQFGVSPD 161 (229)
T ss_dssp ------------------------------------------CTTCCTTSSHH--------------HHHHHHHHTCCGG
T ss_pred ------------------------------------------ccCCCCcCHHH--------------HHHHHHHcCCChh
Confidence 223 566555 9999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|||+.+|+.||+.+|+.+|++.+
T Consensus 162 ~~i~iGD~~~Di~~a~~aG~~~i~~~~ 188 (229)
T 2fdr_A 162 RVVVVEDSVHGIHGARAAGMRVIGFTG 188 (229)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred HeEEEcCCHHHHHHHHHCCCEEEEEec
Confidence 999999999999999999999998865
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-21 Score=174.35 Aligned_cols=191 Identities=15% Similarity=0.069 Sum_probs=128.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHH----------HHHHhCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL----------FFNRIGWP 151 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~g~~ 151 (346)
|.+|+|+||+||||+++....+..++.++++++|++ ++...+....+ ......... +...++..
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMG---LLKIDHVRALTEMPRIASEWNRVFRQL 77 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCC---CCHHHHHTTTT---SCHHHHHHHHHHSHHHHHHHHHHHSSC
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCC---CCHHHHHHHhc---cchHHHHHHhcccHHHHHHHHHHhCCC
Confidence 568999999999999987611568899999999987 33332222211 111111111 11223322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-
Q 019086 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS- 230 (346)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f- 230 (346)
++... +..+.......+.... .....++||+.++++.|+++|++++++|| +....+..+++.+|+..+|
T Consensus 78 --~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~~~~~~~ 147 (267)
T 1swv_A 78 --PTEAD----IQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKP 147 (267)
T ss_dssp --CCHHH----HHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCC
T ss_pred --CCHHH----HHHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCcccCh
Confidence 11111 2233333333333333 23456899999999999999999999999 6677788888888887764
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+.. ++. +.+.. .||+|.+ |+.++
T Consensus 148 ~~~-~~~--------------~~~~~----------------------------~kp~~~~--------------~~~~~ 170 (267)
T 1swv_A 148 DFL-VTP--------------DDVPA----------------------------GRPYPWM--------------CYKNA 170 (267)
T ss_dssp SCC-BCG--------------GGSSC----------------------------CTTSSHH--------------HHHHH
T ss_pred Hhe-ecC--------------CccCC----------------------------CCCCHHH--------------HHHHH
Confidence 432 222 11211 2666666 99999
Q ss_pred HHcCCCC-CcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 311 EYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 311 e~lgv~p-~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++|+++ ++|++|||+.||+.||+.+|+.+++|.+
T Consensus 171 ~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~ 206 (267)
T 1swv_A 171 MELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVIL 206 (267)
T ss_dssp HHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECT
T ss_pred HHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcC
Confidence 9999999 9999999999999999999999999875
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=172.46 Aligned_cols=178 Identities=13% Similarity=0.047 Sum_probs=123.8
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCChHHH--------------------
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRM-------------------- 140 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~~~~-------------------- 140 (346)
|.+|+|+||+||||+++... +..++.+++.++|++ .... ....+.+ .....
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLE---VDAVAFADRWRA----RYQPSMDAILSGAREFVTLDILHRE 84 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHT----THHHHHHHHHTTSSCCCCHHHHHHH
T ss_pred CCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCC---CCHHHHHHHHHH----hHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 56899999999999998775 678899999999987 3332 2222221 11111
Q ss_pred -HHHHHHHhCCCC-CCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHH
Q 019086 141 -LVLFFNRIGWPT-SVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR 218 (346)
Q Consensus 141 -~~~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~ 218 (346)
...+...++.+. .+. ......+.... ....++||+.++|+.|+++ ++++++|| +....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~ 146 (254)
T 3umg_A 85 NLDFVLRESGIDPTNHD------------SGELDELARAW--HVLTPWPDSVPGLTAIKAE-YIIGPLSN---GNTSLLL 146 (254)
T ss_dssp HHHHHHHHTTCCGGGSC------------HHHHHHHHGGG--GSCCBCTTHHHHHHHHHHH-SEEEECSS---SCHHHHH
T ss_pred HHHHHHHHhCCCcCcCC------------HHHHHHHHHHH--hhCcCCcCHHHHHHHHHhC-CeEEEEeC---CCHHHHH
Confidence 112222222210 000 00111111111 3467899999999999997 99999999 6678888
Q ss_pred HHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCch
Q 019086 219 SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPES 298 (346)
Q Consensus 219 ~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~ 298 (346)
.+++.+|+. |+.. ++.++. ...||+|.+
T Consensus 147 ~~l~~~~~~--f~~~-~~~~~~------------------------------------------~~~kp~~~~------- 174 (254)
T 3umg_A 147 DMAKNAGIP--WDVI-IGSDIN------------------------------------------RKYKPDPQA------- 174 (254)
T ss_dssp HHHHHHTCC--CSCC-CCHHHH------------------------------------------TCCTTSHHH-------
T ss_pred HHHHhCCCC--eeEE-EEcCcC------------------------------------------CCCCCCHHH-------
Confidence 999999986 5543 222221 223777776
Q ss_pred hHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 299 LDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 299 ~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
|+.+++++|++|++|++|||+.+|+.||+.+|+.++++.
T Consensus 175 -------~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 175 -------YLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp -------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred -------HHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence 999999999999999999999999999999999999986
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=174.38 Aligned_cols=180 Identities=14% Similarity=0.127 Sum_probs=125.0
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCChHHH-----------------
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRM----------------- 140 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~~~~----------------- 140 (346)
...|.+|+|+||+||||+++... +..++.++++++|++ .... ....+.+. ....+
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 89 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGT---LPCVELTDRWRQQ---YKPAMDRVRNGQAPWQHLDQLH 89 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSC---CCHHHHHHHHHHH---THHHHHHHHTTSSCCCCHHHHH
T ss_pred ccccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCC---CCHHHHHHHHHHH---HHHHHHHHhcccCCcccHHHHH
Confidence 34677899999999999998775 678899999999987 3322 22222221 01111
Q ss_pred ---HHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHH
Q 019086 141 ---LVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA 217 (346)
Q Consensus 141 ---~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~ 217 (346)
...+...++... . ......+.... ....++||+.++|+.|++. ++++++|| +....+
T Consensus 90 ~~~~~~~~~~~~~~~--~------------~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~ 149 (254)
T 3umc_A 90 RQSLEALAGEFGLAL--D------------EALLQRITGFW--HRLRPWPDTLAGMHALKAD-YWLAALSN---GNTALM 149 (254)
T ss_dssp HHHHHHHHHHTTCCC--C------------HHHHHHHHGGG--GSCEECTTHHHHHHHHTTT-SEEEECCS---SCHHHH
T ss_pred HHHHHHHHHHhCCCC--C------------HHHHHHHHHHH--hcCCCCccHHHHHHHHHhc-CeEEEEeC---CCHHHH
Confidence 111122222210 0 00111111121 2356899999999999996 99999999 667888
Q ss_pred HHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCc
Q 019086 218 RSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPE 297 (346)
Q Consensus 218 ~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~ 297 (346)
..+++.+|+. |+.. ++.++. ...||+|.+
T Consensus 150 ~~~l~~~g~~--f~~~-~~~~~~------------------------------------------~~~kp~~~~------ 178 (254)
T 3umc_A 150 LDVARHAGLP--WDML-LCADLF------------------------------------------GHYKPDPQV------ 178 (254)
T ss_dssp HHHHHHHTCC--CSEE-CCHHHH------------------------------------------TCCTTSHHH------
T ss_pred HHHHHHcCCC--cceE-Eeeccc------------------------------------------ccCCCCHHH------
Confidence 9999999986 5543 222211 223777777
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 298 SLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 298 ~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
|+.+++++|++|++|++|||+.+|++||+.+|+.++++.
T Consensus 179 --------~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 179 --------YLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp --------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred --------HHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 999999999999999999999999999999999999986
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-21 Score=168.49 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=89.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++||+.++|+.|+++|++++++|| +....+...++.+|+..+|+..+.+. .+.
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~---------------~~~------ 149 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSN---GSRHSIRQVVGNSGLTNSFDHLISVD---------------EVR------ 149 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTCGGGCSEEEEGG---------------GTT------
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeC---CCHHHHHHHHHHCCChhhcceeEehh---------------hcc------
Confidence 467899999999999999999999999 66788899999999998887643222 111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
..||+|.+ |+.+++++|++|++|++|||+.+|+.||+++|+.++
T Consensus 150 ----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~ 193 (230)
T 3um9_A 150 ----------------------LFKPHQKV--------------YELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVC 193 (230)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred ----------------------cCCCChHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEE
Confidence 12677776 999999999999999999999999999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
++.+
T Consensus 194 ~~~~ 197 (230)
T 3um9_A 194 WINR 197 (230)
T ss_dssp EECT
T ss_pred EEeC
Confidence 9875
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-22 Score=177.87 Aligned_cols=103 Identities=12% Similarity=0.168 Sum_probs=88.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+++|++++++|| +....+..+++.+|+..+|+..+.+. .+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~---------------~~~------- 152 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSN---GNPQMLEIAVKSAGMSGLFDHVLSVD---------------AVR------- 152 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEES---SCHHHHHHHHHTTTCTTTCSEEEEGG---------------GTT-------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeC---CCHHHHHHHHHHCCcHhhcCEEEEec---------------ccC-------
Confidence 56899999999999999999999999 67788999999999998887643222 111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|.+ |+.+++++|++|++|++|||+.+|+.||+.+|+.+++
T Consensus 153 ---------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 153 ---------------------LYKTAPAA--------------YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp ---------------------CCTTSHHH--------------HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCcCHHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 12777777 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
|.+
T Consensus 198 v~~ 200 (233)
T 3umb_A 198 INR 200 (233)
T ss_dssp ECT
T ss_pred EcC
Confidence 865
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=171.99 Aligned_cols=178 Identities=14% Similarity=0.157 Sum_probs=118.3
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHh------hccC--ChHHHHHHHHHHhCCCCCC
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR------KSAG--DEDRMLVLFFNRIGWPTSV 154 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~------~~~g--~~~~~~~~~~~~~g~~~~~ 154 (346)
.+|+|+||+||||+++... . +.+++.++|++. .......+.+ ...| ....+...+...++...
T Consensus 4 m~k~iiFDlDGTL~d~~~~-~---~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 74 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNRE-E---SIRRFKAIGVAD---IEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKEL-- 74 (211)
T ss_dssp CCSEEEECSBTTTEEECHH-H---HHHHHHHTTCTT---HHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCC--
T ss_pred cceEEEEeCCCeeEecchH-H---HHHHHHHhCCch---HHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCC--
Confidence 3789999999999998764 1 266777788762 1111111100 0001 12222233333333210
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH------hCccc
Q 019086 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK------LGSER 228 (346)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~------lgl~~ 228 (346)
. . +.+..........++||+.++|+.|++ |++++|+|| +....+..+++. +|+..
T Consensus 75 ~-------~--------~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~---~~~~~~~~~~~~l~~~~~~~l~~ 135 (211)
T 2i6x_A 75 T-------Y--------QQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSN---TNPYVLDLAMSPRFLPSGRTLDS 135 (211)
T ss_dssp C-------H--------HHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEEC---CCHHHHHHHTSTTSSTTCCCGGG
T ss_pred C-------H--------HHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHhhhccccccCHHH
Confidence 0 0 011111111124578999999999999 999999999 667778888887 78888
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (346)
+|+..+.+. +. ...||+|.+ |+.
T Consensus 136 ~f~~~~~~~-~~------------------------------------------~~~Kp~~~~--------------~~~ 158 (211)
T 2i6x_A 136 FFDKVYASC-QM------------------------------------------GKYKPNEDI--------------FLE 158 (211)
T ss_dssp GSSEEEEHH-HH------------------------------------------TCCTTSHHH--------------HHH
T ss_pred HcCeEEeec-cc------------------------------------------CCCCCCHHH--------------HHH
Confidence 877643322 11 223777777 999
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 309 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 309 ~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++++|++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus 159 ~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 159 MIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp HHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred HHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999865
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=177.90 Aligned_cols=180 Identities=13% Similarity=0.115 Sum_probs=124.0
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCCh-HHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
.+|+|+||+||||+++... +..++.++++++|.. +.. ..+....|.. ......+.... .. ..
T Consensus 34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~~----~~~---~~~~~~~G~~~~~~~~~~~~~~-----~~----~~ 96 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPYF----DAE---HVIHISHGWRTYDAIAKFAPDF-----AD----EE 96 (275)
T ss_dssp EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTTC----CHH---HHHHHCTTCCHHHHHHHHCGGG-----CC----HH
T ss_pred cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCCC----CHH---HHHHHhcCCCHHHHHHHHhccC-----Cc----HH
Confidence 4689999999999998875 667888888888831 111 2222232332 22222221110 01 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhC-CCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~-Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
.+. .....+.+.. .....++||+.++|+.|+++ |++++++|| +....+...++.+|+.. |+.. ++.+
T Consensus 97 ~~~----~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~---~~~~~~~~~l~~~~l~~-f~~i-~~~~-- 164 (275)
T 2qlt_A 97 YVN----KLEGEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATS---GTRDMAKKWFDILKIKR-PEYF-ITAN-- 164 (275)
T ss_dssp HHH----HHHHTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECS---SCHHHHHHHHHHHTCCC-CSSE-ECGG--
T ss_pred HHH----HHHHHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeC---CCHHHHHHHHHHcCCCc-cCEE-EEcc--
Confidence 122 2222333333 23456899999999999999 999999999 66788889999999874 4443 2221
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCC-----
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----- 315 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv----- 315 (346)
.+.. .||+|.+ |+.+++++|+
T Consensus 165 ------------~~~~----------------------------~kp~~~~--------------~~~~~~~lgi~~~~~ 190 (275)
T 2qlt_A 165 ------------DVKQ----------------------------GKPHPEP--------------YLKGRNGLGFPINEQ 190 (275)
T ss_dssp ------------GCSS----------------------------CTTSSHH--------------HHHHHHHTTCCCCSS
T ss_pred ------------cCCC----------------------------CCCChHH--------------HHHHHHHcCCCcccc
Confidence 1111 2677666 9999999999
Q ss_pred --CCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 316 --PVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 316 --~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|++|||+.+|++||+++|+.+|+|.+
T Consensus 191 ~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~ 222 (275)
T 2qlt_A 191 DPSKSKVVVFEDAPAGIAAGKAAGCKIVGIAT 222 (275)
T ss_dssp CGGGSCEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred CCCcceEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999865
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=169.82 Aligned_cols=103 Identities=11% Similarity=0.232 Sum_probs=88.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+..+.+. + +.
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~~~~-~--------------~~------- 158 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSN---GNDEMLQAALKASKLDRVLDSCLSAD-D--------------LK------- 158 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEGG-G--------------TT-------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHhcCcHHHcCEEEEcc-c--------------cC-------
Confidence 56899999999999999999999999 66788999999999998887643322 1 11
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|.+ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++
T Consensus 159 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 159 ---------------------IYKPDPRI--------------YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 12777777 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
|.+
T Consensus 204 v~~ 206 (240)
T 2no4_A 204 INR 206 (240)
T ss_dssp ECT
T ss_pred ECC
Confidence 865
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.7e-22 Score=173.79 Aligned_cols=103 Identities=14% Similarity=0.231 Sum_probs=81.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|+.|+++|++++++|| +....+..++.. +|+..+|+..+.+. + +
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~~~~~~~l~~~f~~~~~~~-~--------------~------- 144 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSN---TNRLHTTFWPEEYPEIRDAADHIYLSQ-D--------------L------- 144 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEEC---CCCCTTSCCGGGCHHHHHHCSEEEEHH-H--------------H-------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEEC---CChHHHHHHHHhccChhhheeeEEEec-c--------------c-------
Confidence 56899999999999999999999999 444544444554 66666665533221 1 1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
...||+|++ |+.+++++|+++++|++|||+.+|+.+|+++|+.++
T Consensus 145 ---------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~ 189 (206)
T 2b0c_A 145 ---------------------GMRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSI 189 (206)
T ss_dssp ---------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ---------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEE
Confidence 123777777 999999999999999999999999999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
++.+
T Consensus 190 ~~~~ 193 (206)
T 2b0c_A 190 LVKD 193 (206)
T ss_dssp ECCS
T ss_pred EecC
Confidence 9875
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-21 Score=171.73 Aligned_cols=103 Identities=14% Similarity=0.166 Sum_probs=88.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+..+.+. + +.
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~-~--------------~~------- 148 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSN---GSPQSIDAVVSHAGLRDGFDHLLSVD-P--------------VQ------- 148 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEESG-G--------------GT-------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHhcChHhhhheEEEec-c--------------cC-------
Confidence 56899999999999999999999999 66788899999999998887643332 1 11
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 149 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 149 ---------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 12777777 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
+.+
T Consensus 194 ~~~ 196 (232)
T 1zrn_A 194 INR 196 (232)
T ss_dssp ECT
T ss_pred EcC
Confidence 865
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=167.91 Aligned_cols=102 Identities=15% Similarity=0.243 Sum_probs=87.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+++ ++++++|| +....+...++.+|+..+|+..+.+. +.
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~~~~~~-~~---------------------- 151 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITD---SDTEQAMAFLDALGIKDLFDSITTSE-EA---------------------- 151 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEHH-HH----------------------
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEEC---CCHHHHHHHHHHcCcHHHcceeEecc-cc----------------------
Confidence 46899999999999999 99999999 66788899999999999887643222 11
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
...||+|.+ |+.+++++|++|++|++|||+. +|+.||+.+|+.++
T Consensus 152 --------------------~~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (234)
T 3u26_A 152 --------------------GFFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (234)
T ss_dssp --------------------TBCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred --------------------CCCCcCHHH--------------HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEE
Confidence 123777777 9999999999999999999998 99999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
+|..
T Consensus 198 ~v~~ 201 (234)
T 3u26_A 198 LLDR 201 (234)
T ss_dssp EECS
T ss_pred EECC
Confidence 9865
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-21 Score=171.10 Aligned_cols=176 Identities=14% Similarity=0.105 Sum_probs=117.0
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHH---HHHHHhhccCC-hHHHHHHHHHHhCCCCCCCChh
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDLLRKSAGD-EDRMLVLFFNRIGWPTSVPTNE 158 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~---~~~~~~~~~g~-~~~~~~~~~~~~g~~~~~~~~~ 158 (346)
.+|+|+||+||||+|+... +..+|.+++.++|++ ..... +..+....+.. .......+......+
T Consensus 10 ~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------- 78 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQ---NSARYWEIFETLRTELGYADYLGALQRYRLEQPRD------- 78 (231)
T ss_dssp CSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHH---HHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC-------
T ss_pred CCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCC---cchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc-------
Confidence 4789999999999999886 678999999999976 22111 12222111111 111111111111110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh
Q 019086 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (346)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (346)
.......+.+.... ....++||+.++|+.|+++| +++|+|| +....++..++.+|+.++|+..+..
T Consensus 79 ------~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn---~~~~~~~~~l~~~gl~~~f~~~~~~-- 144 (231)
T 2p11_A 79 ------TRLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSD---GDVVFQPRKIARSGLWDEVEGRVLI-- 144 (231)
T ss_dssp ------TGGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEE---CCSSHHHHHHHHTTHHHHTTTCEEE--
T ss_pred ------hHHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeC---CCHHHHHHHHHHcCcHHhcCeeEEe--
Confidence 00111222222222 23568999999999999999 9999999 6678899999999998877653210
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
. ++.|.+ ++.+++ |++|+
T Consensus 145 ----------------~------------------------------~~K~~~--------------~~~~~~--~~~~~ 162 (231)
T 2p11_A 145 ----------------Y------------------------------IHKELM--------------LDQVME--CYPAR 162 (231)
T ss_dssp ----------------E------------------------------SSGGGC--------------HHHHHH--HSCCS
T ss_pred ----------------c------------------------------CChHHH--------------HHHHHh--cCCCc
Confidence 0 111334 666666 79999
Q ss_pred cEEEEcCChh---hHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQS---GVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~~---Di~aA~~aG~~~i~v~~ 345 (346)
+|+||||+.+ |+.+|+++||.+|+|.+
T Consensus 163 ~~~~vgDs~~d~~di~~A~~aG~~~i~v~~ 192 (231)
T 2p11_A 163 HYVMVDDKLRILAAMKKAWGARLTTVFPRQ 192 (231)
T ss_dssp EEEEECSCHHHHHHHHHHHGGGEEEEEECC
T ss_pred eEEEEcCccchhhhhHHHHHcCCeEEEeCC
Confidence 9999999998 99999999999999875
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-20 Score=163.95 Aligned_cols=185 Identities=14% Similarity=0.126 Sum_probs=119.1
Q ss_pred ceEEEEeccCccccccccccHHHHHHH---HHHcCCCCCCCChHHHHHHHhhc----c---CChH----HHHHHHHHHhC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLRKS----A---GDED----RMLVLFFNRIG 149 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~---~~~~gi~~~~~~~~~~~~~~~~~----~---g~~~----~~~~~~~~~~g 149 (346)
+|+|+||+||||+++... +..++.++ +.+.+......+...+....... . .... ..........+
T Consensus 2 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTAPA-IVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCEEEECCBTTTBCSHHH-HHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred eeEEEecCcccCcCCchH-HHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 689999999999998764 44444443 33444432223323332222210 0 0001 11122333333
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
++ .+. ...+.....+.+.... ....++||+.++|+.|+++ ++++++||. ... ++.+|+..+
T Consensus 81 ~~----~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~---~~~-----l~~~~l~~~ 141 (230)
T 3vay_A 81 YD----SDE----AQQLADESFEVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNG---NAD-----VRRLGLADY 141 (230)
T ss_dssp CC----HHH----HHHHHHHHHHHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESS---CCC-----GGGSTTGGG
T ss_pred CC----hhh----hHHHHHHHHHHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECC---chh-----hhhcCcHHH
Confidence 32 122 2233334444444433 3477999999999999999 999999994 333 678888888
Q ss_pred hhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHH
Q 019086 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (346)
Q Consensus 230 f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~ 309 (346)
|+..+.+. +. ...||+|.+ |+.+
T Consensus 142 f~~~~~~~-~~------------------------------------------~~~kp~~~~--------------~~~~ 164 (230)
T 3vay_A 142 FAFALCAE-DL------------------------------------------GIGKPDPAP--------------FLEA 164 (230)
T ss_dssp CSEEEEHH-HH------------------------------------------TCCTTSHHH--------------HHHH
T ss_pred eeeeEEcc-cc------------------------------------------CCCCcCHHH--------------HHHH
Confidence 87643222 11 123777777 9999
Q ss_pred HHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 310 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
++++|++|++|++|||+. +|+.||+++|+.+++|.+
T Consensus 165 ~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~ 201 (230)
T 3vay_A 165 LRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNP 201 (230)
T ss_dssp HHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred HHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcC
Confidence 999999999999999998 999999999999999875
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.7e-21 Score=168.94 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=84.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.+ |+.|+++ ++++|+|| +....++.+++.+|+..+|+..+ +.++ +
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~-~~~~--------------~-------- 124 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSN---GSINEVKQHLERNGLLRYFKGIF-SAES--------------V-------- 124 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEES---SCHHHHHHHHHHTTCGGGCSEEE-EGGG--------------G--------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeC---cCHHHHHHHHHHCCcHHhCcEEE-ehhh--------------c--------
Confidence 568999999 9999999 99999999 66788899999999998887643 2221 1
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
...||+|.+ |+.+++++| |++|++|||+.+|+.+|+++||.+++
T Consensus 125 --------------------~~~Kp~~~~--------------~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 125 --------------------KEYKPSPKV--------------YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp --------------------TCCTTCHHH--------------HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred --------------------CCCCCCHHH--------------HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 112777777 999999999 99999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
+.+
T Consensus 169 ~~~ 171 (201)
T 2w43_A 169 VNR 171 (201)
T ss_dssp ECS
T ss_pred ECC
Confidence 875
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-21 Score=170.18 Aligned_cols=110 Identities=9% Similarity=0.106 Sum_probs=86.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+..+...+. .+.....+. +..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~----~~~~~~~~~-~~~------ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSG---GFDLATNHYRDLLHLDAAFSNTLIVEND----ALNGLVTGH-MMF------ 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT----EEEEEEEES-CCS------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcC---CchhHHHHHHHHcCcchhccceeEEeCC----EEEeeeccC-CCC------
Confidence 66999999999999999999999999 7788999999999999988765422211 011111110 111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.||+|.+ |+.+++++|++|++|++|||+.+|+.||+.+|+.+++
T Consensus 140 ----------------------~k~k~~~--------------~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 140 ----------------------SHSKGEM--------------LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp ----------------------TTHHHHH--------------HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred ----------------------CCChHHH--------------HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 1445554 9999999999999999999999999999999999876
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.4e-20 Score=168.94 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=87.2
Q ss_pred CCCCCCcHHHHHHHHHhCCC--CEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcc
Q 019086 182 DAPLRPGVEDFVDDAYNEGI--PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi--~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~ 259 (346)
...++||+.++|+.|+++|+ +++|+|| +....++.+++.+|+..+|+..+.+.+ . +..+.
T Consensus 140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~v~~~~~-~----------~~~~~---- 201 (282)
T 3nuq_A 140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTN---AYKNHAIRCLRLLGIADLFDGLTYCDY-S----------RTDTL---- 201 (282)
T ss_dssp TCCCCHHHHHHHHHHHHSSSCSEEEEECS---SCHHHHHHHHHHHTCTTSCSEEECCCC-S----------SCSSC----
T ss_pred ccCcChhHHHHHHHHHhCCCCceEEEEEC---CChHHHHHHHHhCCcccccceEEEecc-C----------CCccc----
Confidence 46789999999999999999 9999999 677889999999999998877543321 0 01111
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p-~e~i~VGDs~~Di~aA~~aG~ 338 (346)
..||+|.+ |+.+++++|++| ++|++|||+.+|+.||+++||
T Consensus 202 ------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 243 (282)
T 3nuq_A 202 ------------------------VCKPHVKA--------------FEKAMKESGLARYENAYFIDDSGKNIETGIKLGM 243 (282)
T ss_dssp ------------------------CCTTSHHH--------------HHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred ------------------------CCCcCHHH--------------HHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCC
Confidence 12666666 999999999999 999999999999999999999
Q ss_pred -CEEEecC
Q 019086 339 -PCVVMRS 345 (346)
Q Consensus 339 -~~i~v~~ 345 (346)
.++++..
T Consensus 244 ~~~~~~~~ 251 (282)
T 3nuq_A 244 KTCIHLVE 251 (282)
T ss_dssp SEEEEECS
T ss_pred eEEEEEcC
Confidence 4566543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=186.04 Aligned_cols=189 Identities=16% Similarity=0.185 Sum_probs=116.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+|+|+||+||||++.... ..+..++...+++. ......+... +....+..... + .....+...
T Consensus 1 M~~k~viFD~DGTL~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~---~---~~~~~~~~~ 65 (555)
T 3i28_A 1 MTLRAAVFDLDGVLALPAVF---GVLGRTEEALALPR-----GLLNDAFQKG-GPEGATTRLMK---G---EITLSQWIP 65 (555)
T ss_dssp ---CEEEECTBTTTEESCTH---HHHHHHHHHTTCCT-----THHHHHHHTT-GGGSHHHHHHT---T---SSCHHHHHH
T ss_pred CceEEEEEecCCeeecchhH---HHHHHHHHHhCCcH-----HHHHHHHhcc-CcccchhHHhc---C---CCCHHHHHH
Confidence 45899999999999977653 67777888888863 2222222211 11111111110 0 001011000
Q ss_pred HHHHHHH--------------HHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh--C
Q 019086 162 FVKNVLQ--------------EKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G 225 (346)
Q Consensus 162 ~~~~l~~--------------~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l--g 225 (346)
.+..... ...+.+.+... ...++||+.++|+.|+++|++++|+||+.. ........+..+ |
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~~~~~~~~~~ 142 (555)
T 3i28_A 66 LMEENCRKCSETAKVCLPKNFSIKEIFDKAIS--ARKINRPMLQAALMLRKKGFTTAILTNTWL-DDRAERDGLAQLMCE 142 (555)
T ss_dssp HHHHHHHHHHHHTTCCCCTTCCHHHHHHHHHH--HCEECHHHHHHHHHHHHTTCEEEEEECCCC-CCSTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCccccHHHHHHHhHh--hcCcChhHHHHHHHHHHCCCEEEEEeCCCc-cccchhhHHHHHhhh
Confidence 0000000 02223333332 256899999999999999999999999410 112223333333 7
Q ss_pred cccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHH
Q 019086 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (346)
Q Consensus 226 l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~ 305 (346)
+..+|+..+.+ +++ ...||+|++
T Consensus 143 l~~~fd~i~~~-~~~------------------------------------------~~~KP~p~~-------------- 165 (555)
T 3i28_A 143 LKMHFDFLIES-CQV------------------------------------------GMVKPEPQI-------------- 165 (555)
T ss_dssp HHTTSSEEEEH-HHH------------------------------------------TCCTTCHHH--------------
T ss_pred hhhheeEEEec-ccc------------------------------------------CCCCCCHHH--------------
Confidence 77777764332 222 223888888
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+++++|++|++|++|||+.+||.+|+++||.+|++.+
T Consensus 166 ~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 166 YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred HHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999999865
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=161.47 Aligned_cols=194 Identities=11% Similarity=0.118 Sum_probs=120.4
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHH----HHHHhh-ccC--ChHHHHHHHHHHhCCCCCCC
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY----TDLLRK-SAG--DEDRMLVLFFNRIGWPTSVP 155 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~----~~~~~~-~~g--~~~~~~~~~~~~~g~~~~~~ 155 (346)
.+++|+||+||||+|++.. ..|.+.+...++.. ....+ ...... ..| ....+...+...+. ..+
T Consensus 3 ~~k~viFDlDGTL~d~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~ 73 (232)
T 3fvv_A 3 TRRLALFDLDHTLLPLDSD---YQWADFLARTGRAG---DPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA---AHS 73 (232)
T ss_dssp CCEEEEECCBTTTBSSCHH---HHHHHHHHHTTSSS---SHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH---TSC
T ss_pred CCcEEEEeCCCCCcCCchH---HHHHHHHHHcCCCC---ccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc---CCC
Confidence 4689999999999999875 46777777776630 11111 111100 001 12222222221111 111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheec
Q 019086 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 235 (346)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~ 235 (346)
.+.+.......+.+.+. ..++||+.++|+.|+++|++++|+|| +....++.+++.+|++.++...+.
T Consensus 74 -------~~~~~~~~~~~~~~~~~---~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~~~~~~~~~g~~~~~~~~~~ 140 (232)
T 3fvv_A 74 -------PVELAAWHEEFMRDVIR---PSLTVQAVDVVRGHLAAGDLCALVTA---TNSFVTAPIARAFGVQHLIATDPE 140 (232)
T ss_dssp -------HHHHHHHHHHHHHHTTG---GGCCHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCCEEEECEEE
T ss_pred -------HHHHHHHHHHHHHHhhh---hhcCHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEcceE
Confidence 11222233333333331 14799999999999999999999999 778999999999999877655432
Q ss_pred chhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC-
Q 019086 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE- 314 (346)
Q Consensus 236 ~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg- 314 (346)
..+ ++..| ||.+.. +..++++. .++.+++++|
T Consensus 141 ~~~--------------~~~~g----------------------------~~~~~~--~~~~~K~~---~~~~~~~~~~~ 173 (232)
T 3fvv_A 141 YRD--------------GRYTG----------------------------RIEGTP--SFREGKVV---RVNQWLAGMGL 173 (232)
T ss_dssp EET--------------TEEEE----------------------------EEESSC--SSTHHHHH---HHHHHHHHTTC
T ss_pred EEC--------------CEEee----------------------------eecCCC--CcchHHHH---HHHHHHHHcCC
Confidence 211 11111 222111 11222233 3889999999
Q ss_pred --CCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 315 --KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 315 --v~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|++|++|||+.+|+.+++.+|+.+++.++
T Consensus 174 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 174 ALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp CGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred CcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 9999999999999999999999999887653
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-20 Score=166.49 Aligned_cols=184 Identities=11% Similarity=0.130 Sum_probs=110.8
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+.+|+|+||+||||+|++.. .++++.+|++. ...+.+....+.. ......+......+..
T Consensus 12 ~~~k~viFD~DGTLvd~~~~------~~~~~~~g~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------- 71 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEGI------DELAKICGVED--AVSEMTRRAMGGA-VPFKAALTERLALIQP----------- 71 (225)
T ss_dssp HHCSEEEEETBTTTBSSCHH------HHHHHHTTCTT--TC-------------CHHHHHHHHHHHHCC-----------
T ss_pred hhCCEEEEeCcccccccccH------HHHHHHhCCcH--HHHHHHHHHHcCC-ccHHHHHHHHHHHhcC-----------
Confidence 34789999999999998753 56788888762 1122222222110 0111111111111110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--chhheecchhh
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEE 239 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~f~~~i~~~~e 239 (346)
..+.+.+.+.....+++||+.++|+.|+++|++++|+|| +....++.+++.+|+.. +|+..+...
T Consensus 72 --------~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~~~f~~~~~~~-- 138 (225)
T 1nnl_A 72 --------SREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATNVFANRLKFY-- 138 (225)
T ss_dssp --------CHHHHHHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGGEEEECEEEC--
T ss_pred --------CHHHHHHHHHhccCCCCccHHHHHHHHHHCCCcEEEEeC---ChHHHHHHHHHHcCCCcccEEeeeEEEc--
Confidence 011122222223467999999999999999999999999 77888999999999973 665432110
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
++.++.+...... .+..+++|.+ |+.+++++|+ ++
T Consensus 139 -----~~~~~~~~~~~~~-----------------------------------~~~~~~Kp~~---~~~~~~~~~~--~~ 173 (225)
T 1nnl_A 139 -----FNGEYAGFDETQP-----------------------------------TAESGGKGKV---IKLLKEKFHF--KK 173 (225)
T ss_dssp -----TTSCEEEECTTSG-----------------------------------GGSTTHHHHH---HHHHHHHHCC--SC
T ss_pred -----CCCcEecCCCCCc-----------------------------------ccCCCchHHH---HHHHHHHcCC--Cc
Confidence 1111112111000 0001122222 8999999998 89
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEec
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
|++|||+.+|+.+|+++|+ +|.+.
T Consensus 174 ~~~vGDs~~Di~~a~~ag~-~i~~~ 197 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADA-FIGFG 197 (225)
T ss_dssp EEEEESSHHHHTTTTTSSE-EEEEC
T ss_pred EEEEeCcHHhHHHHHhCCe-EEEec
Confidence 9999999999999999999 88775
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-19 Score=162.55 Aligned_cols=101 Identities=12% Similarity=0.140 Sum_probs=86.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+ |++++|+|| +....++.+++.+|+..+|+..+.+. + +.
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~---~~~~~~~~~l~~~gl~~~f~~~~~~~-~--------------~~------- 144 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSN---GAPDMLQALVANAGLTDSFDAVISVD-A--------------KR------- 144 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEGG-G--------------GT-------
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeC---cCHHHHHHHHHHCCchhhccEEEEcc-c--------------cC-------
Confidence 578999999999999 999999999 66788899999999998887643322 1 11
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 145 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~ 189 (253)
T 1qq5_A 145 ---------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVAR 189 (253)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEE
Confidence 12777777 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
+.+
T Consensus 190 ~~~ 192 (253)
T 1qq5_A 190 VAR 192 (253)
T ss_dssp ECC
T ss_pred ECC
Confidence 865
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.8e-20 Score=160.43 Aligned_cols=110 Identities=16% Similarity=0.279 Sum_probs=89.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+||........+..+++.+|+..+|+..+.+.+.... +
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~--------------~----- 93 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQP--------------G----- 93 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSST--------------T-----
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccc--------------c-----
Confidence 568999999999999999999999994322238899999999999988875444321000 0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCV 341 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i 341 (346)
...||+|.+ |+.+++++|++|++|+||||+ .+|+.+|+++||.+|
T Consensus 94 --------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 94 --------------------KMEKPDKTI--------------FDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp --------------------CCCTTSHHH--------------HHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred --------------------CCCCcCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 112777777 999999999999999999999 699999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
+|.+
T Consensus 140 ~v~~ 143 (189)
T 3ib6_A 140 WLQN 143 (189)
T ss_dssp EECC
T ss_pred EECC
Confidence 9975
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-20 Score=175.09 Aligned_cols=183 Identities=11% Similarity=0.118 Sum_probs=119.7
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.+.+|+|+|||||||++++.. .++...+|+. ................+...+..++.......
T Consensus 105 ~~~~kaviFDlDGTLid~~~~------~~la~~~g~~------~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~----- 167 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV------DEIARELGMS------TQITAITQQAMEGKLDFNASFTRRIGMLKGTP----- 167 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH------HHHHHHTTCH------HHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCB-----
T ss_pred CCCCCEEEEcCCCCccCCccH------HHHHHHhCCc------HHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC-----
Confidence 456789999999999998763 4555667765 12222222111112122223333332211111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
.+.+.... ...+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+...+.
T Consensus 168 ----------~~~i~~~~--~~~~l~pg~~e~L~~Lk~~G~~v~IvSn---~~~~~~~~~l~~lgl~~~f~~~l~~~dg- 231 (317)
T 4eze_A 168 ----------KAVLNAVC--DRMTLSPGLLTILPVIKAKGFKTAIISG---GLDIFTQRLKARYQLDYAFSNTVEIRDN- 231 (317)
T ss_dssp ----------HHHHHHHH--HTCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEECEEEETT-
T ss_pred ----------HHHHHHHH--hCCEECcCHHHHHHHHHhCCCEEEEEeC---ccHHHHHHHHHHcCCCeEEEEEEEeeCC-
Confidence 01111111 1256999999999999999999999999 7889999999999999988765322211
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
.++..+.+.. ...||+|.+ |+.+++++|++|++|
T Consensus 232 ---~~tg~i~~~~-----------------------------~~~kpkp~~--------------~~~~~~~lgv~~~~~ 265 (317)
T 4eze_A 232 ---VLTDNITLPI-----------------------------MNAANKKQT--------------LVDLAARLNIATENI 265 (317)
T ss_dssp ---EEEEEECSSC-----------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred ---eeeeeEeccc-----------------------------CCCCCCHHH--------------HHHHHHHcCCCcceE
Confidence 1111111110 011555555 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEE
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++|||+.+|+.+|+++|+.+++
T Consensus 266 i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 266 IACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEeCCHHHHHHHHHCCCeEEe
Confidence 9999999999999999998776
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=160.35 Aligned_cols=99 Identities=14% Similarity=0.217 Sum_probs=77.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+++|++++|+|| .....+ +..++ .+|+. ++.++.+..+
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~---~~~~~~---~~~~~--~~~d~---------------v~~~~~~~~~----- 86 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDE---LPEALS---TPLAA--PVNDW---------------MIAAPRPTAG----- 86 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECC---SCHHHH---HHHHT--TTTTT---------------CEECCCCSSC-----
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcC---ChHHHH---HHhcC--ccCCE---------------EEECCcCCCC-----
Confidence 45899999999999999999999999 444444 23333 23333 3333333322
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCCEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p-~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
||+|++ |..+++++|+.+ ++|+||||+.+||.+|+++||.+|
T Consensus 87 -----------------------KP~p~~--------------~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i 129 (196)
T 2oda_A 87 -----------------------WPQPDA--------------CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTI 129 (196)
T ss_dssp -----------------------TTSTHH--------------HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEE
T ss_pred -----------------------CCChHH--------------HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEE
Confidence 788888 999999999975 899999999999999999999999
Q ss_pred EecCC
Q 019086 342 VMRSR 346 (346)
Q Consensus 342 ~v~~~ 346 (346)
+|.++
T Consensus 130 ~v~~g 134 (196)
T 2oda_A 130 GLASC 134 (196)
T ss_dssp EESSS
T ss_pred EEccC
Confidence 99763
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-19 Score=154.06 Aligned_cols=105 Identities=11% Similarity=0.068 Sum_probs=83.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCch---------------hHHHHHHHHhC--cccchhheecchhhHHHhhh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLG--SERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~---------------~~~~~~l~~lg--l~~~f~~~i~~~~e~~~~~f 245 (346)
.+++||+.++|+.|+++|++++|+||. .. ..+...++.+| ++.+|...+.+
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~--------- 93 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQ---SGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGP--------- 93 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEC---TTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCT---------
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECC---CccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCC---------
Confidence 458999999999999999999999994 33 45677788888 55433211111
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
.+.+. ..||+|++ |+.+++++|++|++|+||||
T Consensus 94 -----~~~~~----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vGD 126 (179)
T 3l8h_A 94 -----DDGCA----------------------------CRKPLPGM--------------YRDIARRYDVDLAGVPAVGD 126 (179)
T ss_dssp -----TSCCS----------------------------SSTTSSHH--------------HHHHHHHHTCCCTTCEEEES
T ss_pred -----CCCCC----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECC
Confidence 11121 23788887 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEecCC
Q 019086 326 SQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~ 346 (346)
+.+|+.+|+++||.+|+|.++
T Consensus 127 ~~~Di~~a~~aG~~~i~v~~g 147 (179)
T 3l8h_A 127 SLRDLQAAAQAGCAPWLVQTG 147 (179)
T ss_dssp SHHHHHHHHHHTCEEEEESTT
T ss_pred CHHHHHHHHHCCCcEEEECCC
Confidence 999999999999999999764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-19 Score=175.06 Aligned_cols=183 Identities=14% Similarity=0.136 Sum_probs=120.2
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
...+|+|+|||||||++++.. ..+....|+. .....+..........+...+..++..-..++.+.
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~------~~la~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-- 247 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI------EMLAAKAGAE------GQVAAITDAAMRGELDFAQSLQQRVATLAGLPATV-- 247 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH------HHHHHHTTCH------HHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHH--
T ss_pred ccCCcEEEEcCcccCcCCchH------HHHHHHcCCc------HHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHH--
Confidence 345789999999999998753 4556666765 22223322221222222233333332221222111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
+ +.+.+ ..+++||+.++|+.|+++|++++|+|| +....++.+++.+|++.+|...+.-
T Consensus 248 --~--------~~~~~-----~~~~~pg~~e~l~~Lk~~G~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~---- 305 (415)
T 3p96_A 248 --I--------DEVAG-----QLELMPGARTTLRTLRRLGYACGVVSG---GFRRIIEPLAEELMLDYVAANELEI---- 305 (415)
T ss_dssp --H--------HHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCSEEEEECEEE----
T ss_pred --H--------HHHHH-----hCccCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCccceeeeeEEE----
Confidence 1 11111 146999999999999999999999999 7889999999999999877643211
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
++..++|.....- ...||+|.+ |+.+++++|++|++|
T Consensus 306 ----~dg~~tg~~~~~v-------------------------~~~kpk~~~--------------~~~~~~~~gi~~~~~ 342 (415)
T 3p96_A 306 ----VDGTLTGRVVGPI-------------------------IDRAGKATA--------------LREFAQRAGVPMAQT 342 (415)
T ss_dssp ----ETTEEEEEECSSC-------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred ----eCCEEEeeEccCC-------------------------CCCcchHHH--------------HHHHHHHcCcChhhE
Confidence 1222222211000 012566666 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEE
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++|||+.+|+.||+++|+.+++
T Consensus 343 i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 343 VAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEECCHHHHHHHHHCCCeEEE
Confidence 9999999999999999998876
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=152.33 Aligned_cols=103 Identities=11% Similarity=0.043 Sum_probs=82.6
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchh-heecchhhHHHhhhhccccccccccCcch
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~-~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
..+++||+.++|+.|+++ ++++|+|| +....++.+++.+|+..+|+ ..+.+. ++. ..+
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~gl~~~f~~~~~~~~-~~~-------------~~~--- 125 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDD-SDR-------------VVG--- 125 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECT-TSC-------------EEE---
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEEC---ChHHHHHHHHHHcCCcceecceeEEcC-Cce-------------EEe---
Confidence 467899999999999999 99999999 67888999999999998874 322221 110 000
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
..||+|.+ +..+++++++.|++|++|||+.+|+.+|+++|+.+
T Consensus 126 -----------------------~~~p~p~~--------------~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~ 168 (206)
T 1rku_A 126 -----------------------YQLRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168 (206)
T ss_dssp -----------------------EECCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEE
T ss_pred -----------------------eecCCCch--------------HHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccE
Confidence 00366665 89999999999999999999999999999999987
Q ss_pred EE
Q 019086 341 VV 342 (346)
Q Consensus 341 i~ 342 (346)
++
T Consensus 169 ~~ 170 (206)
T 1rku_A 169 LF 170 (206)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=162.23 Aligned_cols=115 Identities=16% Similarity=0.069 Sum_probs=90.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh-eecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~-~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|+. .+++.+++... ++....
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn---~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-------~~~~~~----- 278 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASDVLEA-------ENMYPQ----- 278 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-------HHHSTT-----
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHcCChHhcCCCEEEeccccccc-------cccccc-----
Confidence 46789999999999999999999999 677889999999999999982 35555443210 000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--------------CCCCcEEEEcCCh
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--------------KPVRNCFLIAGSQ 327 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--------------v~p~e~i~VGDs~ 327 (346)
.....||+|++ |..+++++| ++|++|+||||+.
T Consensus 279 -------------------~kp~~KP~P~~--------------~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~ 325 (384)
T 1qyi_A 279 -------------------ARPLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325 (384)
T ss_dssp -------------------SCCCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH
T ss_pred -------------------ccCCCCCCHHH--------------HHHHHHHcCCccccccccccccCCCCcCeEEEcCCH
Confidence 00012677777 999999999 9999999999999
Q ss_pred hhHHHHHHcCCCEEEecC
Q 019086 328 SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 328 ~Di~aA~~aG~~~i~v~~ 345 (346)
+|+.+|++|||.+|+|++
T Consensus 326 ~Di~aAk~AG~~~I~V~~ 343 (384)
T 1qyi_A 326 ADLLSAQKIGATFIGTLT 343 (384)
T ss_dssp HHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHcCCEEEEECC
Confidence 999999999999999875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-19 Score=159.84 Aligned_cols=41 Identities=10% Similarity=0.268 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++|++|||+ .||++||+.+|+.+++|.++
T Consensus 182 ~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g 223 (250)
T 2c4n_A 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 223 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred HHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCC
Confidence 999999999999999999999 69999999999999998753
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-18 Score=143.57 Aligned_cols=100 Identities=18% Similarity=0.337 Sum_probs=83.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
+||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+.+. +.
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~i~~~~-~~------------------------- 70 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSN---DPGGLGAAPIRELETNGVVDKVLLSG-EL------------------------- 70 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC---SCCGGGGHHHHHHHHTTSSSEEEEHH-HH-------------------------
T ss_pred CccHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHCChHhhccEEEEec-cC-------------------------
Confidence 45777889999999999999999 56677888899999998887654322 11
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
...||+|.+ |+.+++++|++|++|+||||+.+|+.+|+++||.+|++.+
T Consensus 71 -----------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 71 -----------------GVEKPEEAA--------------FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp -----------------SCCTTSHHH--------------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSC
T ss_pred -----------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCC
Confidence 123788877 9999999999999999999999999999999999999865
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-18 Score=151.76 Aligned_cols=108 Identities=14% Similarity=0.129 Sum_probs=78.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc--cchhheecchhhHHHhhhhccccccccccCcch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
..++||+.++|+.|+++|++++|+|| +....++..++.+|+. .+|...+.... .+...+.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~-- 142 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSG---GLSESIQPFADYLNIPRENIFAVETIWNS-------------DGSFKEL-- 142 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCCGGGEEEEEEEECT-------------TSBEEEE--
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHcCCCcccEEEeeeeecC-------------CCceecc--
Confidence 34889999999999999999999999 7788999999999994 34443221110 0000000
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
...||++.. .++.+++.+|+++++|++|||+.+|+.|+ ++|+.+
T Consensus 143 ----------------------~~~~~~~~~-------------~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~ 186 (219)
T 3kd3_A 143 ----------------------DNSNGACDS-------------KLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYAT 186 (219)
T ss_dssp ----------------------ECTTSTTTC-------------HHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCS
T ss_pred ----------------------CCCCCCccc-------------HHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCc
Confidence 011455444 25666677899999999999999999998 589998
Q ss_pred EEec
Q 019086 341 VVMR 344 (346)
Q Consensus 341 i~v~ 344 (346)
+++.
T Consensus 187 ~~v~ 190 (219)
T 3kd3_A 187 KFIA 190 (219)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-18 Score=149.77 Aligned_cols=99 Identities=11% Similarity=0.190 Sum_probs=84.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|+.|+++|++++|+|| +. ...++.+++.+|+..+|+..++..
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~---~~~~~~~~~~l~~~gl~~~f~~~~~~~------------------------ 119 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASR---TSEIEGANQLLELFDLFRYFVHREIYP------------------------ 119 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEEC---CSCHHHHHHHHHHTTCTTTEEEEEESS------------------------
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeC---CCChHHHHHHHHHcCcHhhcceeEEEe------------------------
Confidence 56899999999999999999999999 65 578899999999998887642111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+|+|.+ |+.+++++|++|++|+||||+.+|+.+|+++|+.+|
T Consensus 120 ------------------------~~k~~~--------------~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 120 ------------------------GSKITH--------------FERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp ------------------------SCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ------------------------CchHHH--------------HHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 233333 999999999999999999999999999999999999
Q ss_pred EecCC
Q 019086 342 VMRSR 346 (346)
Q Consensus 342 ~v~~~ 346 (346)
+|.++
T Consensus 162 ~v~~g 166 (187)
T 2wm8_A 162 HIQNG 166 (187)
T ss_dssp ECSSS
T ss_pred EECCC
Confidence 98763
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-19 Score=160.24 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=76.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~ 264 (346)
++|++.++++.|+ +|+++ ++||. ........+..+|+..+|+.. ..+...+.+..+
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~------- 178 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHK---ARYYKRKDGLALGPGPFVTAL------------EYATDTKAMVVG------- 178 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCC---CSEEEETTEEEECSHHHHHHH------------HHHHTCCCEECS-------
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECC---CCcCcccCCcccCCcHHHHHH------------HHHhCCCceEec-------
Confidence 6789999999999 89999 99994 333333334455666655421 111222222222
Q ss_pred HHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEe
Q 019086 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 343 (346)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v 343 (346)
||+|.+ |+.+++++|++|++|++|||+. +|+.||+++||.+|+|
T Consensus 179 ---------------------Kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v 223 (259)
T 2ho4_A 179 ---------------------KPEKTF--------------FLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV 223 (259)
T ss_dssp ---------------------TTSHHH--------------HHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred ---------------------CCCHHH--------------HHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEE
Confidence 777777 9999999999999999999998 9999999999999999
Q ss_pred cCC
Q 019086 344 RSR 346 (346)
Q Consensus 344 ~~~ 346 (346)
.++
T Consensus 224 ~~g 226 (259)
T 2ho4_A 224 KTG 226 (259)
T ss_dssp SST
T ss_pred CCC
Confidence 763
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-18 Score=156.74 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=77.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++.+++ |+..+ +. +++.++... +..+ .+
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~l~--~l~~~-~~-v~~~~~~~~--------~~~~-~~----- 134 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLE--GIVEK-DR-IYCNHASFD--------NDYI-HI----- 134 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHT--TTSCG-GG-EEEEEEECS--------SSBC-EE-----
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHh--cCCCC-Ce-EEeeeeEEc--------CCce-EE-----
Confidence 56999999999999999999999999 66777888887 77654 43 333322100 0000 00
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccc-cCCCCCchhHHHHHHHH-------HHHHHcCCCCCcEEEEcCChhhHHHHH
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVD-IDTSSPESLDKIVAALR-------AGAEYAEKPVRNCFLIAGSQSGVAGAQ 334 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~-i~~p~~~~~~~~~~~~~-------~~~e~lgv~p~e~i~VGDs~~Di~aA~ 334 (346)
...||+|. + ++ .+++++|++|++|+||||+.+|+.+|+
T Consensus 135 --------------------~~~kp~p~~~--------------~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~ 180 (236)
T 2fea_A 135 --------------------DWPHSCKGTC--------------SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAK 180 (236)
T ss_dssp --------------------ECTTCCCTTC--------------CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHH
T ss_pred --------------------ecCCCCcccc--------------ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHH
Confidence 00278877 4 43 678999999999999999999999999
Q ss_pred HcCCCEE
Q 019086 335 RIGMPCV 341 (346)
Q Consensus 335 ~aG~~~i 341 (346)
++|+.++
T Consensus 181 ~aG~~~~ 187 (236)
T 2fea_A 181 LSDLCFA 187 (236)
T ss_dssp TCSEEEE
T ss_pred hCCeeee
Confidence 9999886
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-17 Score=145.14 Aligned_cols=110 Identities=13% Similarity=0.176 Sum_probs=78.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..+.|++.++|+.|+++|++++++|+ +....++..++.+|+..+|...+...+. ...++..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-------- 135 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDG--------KLTGDVE-------- 135 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT--------EEEEEEE--------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCCCeEEEeeeEEECC--------EEcCCcc--------
Confidence 45789999999999999999999999 5667778888999987766433221110 0011000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..+ +...+++. ++..+++++|+++++|++|||+.+|+.||+.||+.+++
T Consensus 136 --------------------------~~~--~~~~~K~~---~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~ 184 (211)
T 1l7m_A 136 --------------------------GEV--LKENAKGE---ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 184 (211)
T ss_dssp --------------------------CSS--CSTTHHHH---HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEE
T ss_pred --------------------------cCc--cCCccHHH---HHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEE
Confidence 000 00112223 38999999999999999999999999999999997543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-17 Score=158.13 Aligned_cols=183 Identities=11% Similarity=0.118 Sum_probs=117.0
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
....++|+||+||||++.+ .+.+.+...|+. .....+..........+...+..++..-.....+
T Consensus 104 i~~~~~viFD~DgTLi~~~------~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 168 (335)
T 3n28_A 104 LTKPGLIVLDMDSTAIQIE------CIDEIAKLAGVG------EEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQ--- 168 (335)
T ss_dssp TTSCCEEEECSSCHHHHHH------HHHHHHHHHTCH------HHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBTT---
T ss_pred ccCCCEEEEcCCCCCcChH------HHHHHHHHcCCc------hHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHH---
Confidence 3456899999999999843 445666667765 2222222211111222222233333221111100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
.+ +.+ ....+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+.-
T Consensus 169 ------------~~-~~~-~~~~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~---- 227 (335)
T 3n28_A 169 ------------IL-SQV-RETLPLMPELPELVATLHAFGWKVAIASG---GFTYFSDYLKEQLSLDYAQSNTLEI---- 227 (335)
T ss_dssp ------------HH-HHH-HTTCCCCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEE----
T ss_pred ------------HH-HHH-HHhCCcCcCHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCCeEEeeeeEe----
Confidence 01 111 12357999999999999999999999999 7788999999999999877653211
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
++..++|.....- ...||+|.+ |+.+++++|+++++|
T Consensus 228 ----~d~~~tg~~~~~~-------------------------~~~kpk~~~--------------~~~~~~~lgi~~~~~ 264 (335)
T 3n28_A 228 ----VSGKLTGQVLGEV-------------------------VSAQTKADI--------------LLTLAQQYDVEIHNT 264 (335)
T ss_dssp ----ETTEEEEEEESCC-------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGE
T ss_pred ----eCCeeeeeecccc-------------------------cChhhhHHH--------------HHHHHHHcCCChhhE
Confidence 1111222100000 011555555 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEE
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++|||+.+|+.||+.+|+.+++
T Consensus 265 v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 265 VAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp EEEECSGGGHHHHHHSSEEEEE
T ss_pred EEEeCCHHHHHHHHHCCCeEEe
Confidence 9999999999999999998776
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.9e-18 Score=148.18 Aligned_cols=109 Identities=12% Similarity=0.138 Sum_probs=82.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC------------chhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~------------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
.+++||+.++|+.|+++|++++|+||...- ....+..+++.+|+. |+..+++....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~---------- 108 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP---------- 108 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG----------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCC----------
Confidence 458999999999999999999999993100 467788899999987 65543331000
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
.+.+ ..+||+|++ |+.+++++|++|++|+||||+.+|+
T Consensus 109 ~~~~----------------------------~~~KP~p~~--------------~~~~~~~~gi~~~~~l~VGD~~~Di 146 (176)
T 2fpr_A 109 ADEC----------------------------DCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 146 (176)
T ss_dssp GGCC----------------------------SSSTTSCGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred cccc----------------------------cccCCCHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 0111 123888888 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEecC
Q 019086 331 AGAQRIGMPCVVMRS 345 (346)
Q Consensus 331 ~aA~~aG~~~i~v~~ 345 (346)
.+|+++||.+|++.+
T Consensus 147 ~~A~~aG~~~i~v~~ 161 (176)
T 2fpr_A 147 QLAENMGINGLRYDR 161 (176)
T ss_dssp HHHHHHTSEEEECBT
T ss_pred HHHHHcCCeEEEEcC
Confidence 999999999999875
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-17 Score=145.40 Aligned_cols=112 Identities=13% Similarity=0.119 Sum_probs=85.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc---------------hhHHHHHHHHhCcccchhheecchhhHHHhhhhc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 247 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~---------------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~ 247 (346)
.+++||+.++|++|+++|++++|+|| +. ...+...++.+|+. |+..+.+.+.. +.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~-----~~ 118 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTN---QSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHP-----QG 118 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEE---CTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBT-----TC
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEEC---cCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCC-----CC
Confidence 45899999999999999999999999 55 36778889999987 54433222100 00
Q ss_pred cc--cccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 248 FV--LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 248 i~--~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
++ .++.+. ..||+|++ |+.+++++|++|++|+||||
T Consensus 119 ~~~~~~~~~~----------------------------~~KP~p~~--------------~~~~~~~lgi~~~~~~~VGD 156 (211)
T 2gmw_A 119 SVEEFRQVCD----------------------------CRKPHPGM--------------LLSARDYLHIDMAASYMVGD 156 (211)
T ss_dssp SSGGGBSCCS----------------------------SSTTSCHH--------------HHHHHHHHTBCGGGCEEEES
T ss_pred cccccCccCc----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEcC
Confidence 00 011111 23777777 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCE-EEecCC
Q 019086 326 SQSGVAGAQRIGMPC-VVMRSR 346 (346)
Q Consensus 326 s~~Di~aA~~aG~~~-i~v~~~ 346 (346)
+.+|+.+|+++||.+ |+|.++
T Consensus 157 ~~~Di~~a~~aG~~~~i~v~~g 178 (211)
T 2gmw_A 157 KLEDMQAAVAANVGTKVLVRTG 178 (211)
T ss_dssp SHHHHHHHHHTTCSEEEEESSS
T ss_pred CHHHHHHHHHCCCceEEEEecC
Confidence 999999999999999 998753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-19 Score=158.54 Aligned_cols=156 Identities=15% Similarity=0.130 Sum_probs=107.7
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
.++|+|||||||+|+... +..+|.+++. |++ .++.+.+..+. ... .+..+ .+
T Consensus 2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~--~~~~~~~~~~~------~~~----~~~~~-~~------------ 53 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEP--HVPLEQRRGFL------ARE----QYRAL-RP------------ 53 (193)
T ss_dssp CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSC--CCCGGGCCSSC------HHH----HHHHH-CT------------
T ss_pred CcEEEEECCCcCccchhH-HHHHHHHHhc--CCC--CCCHHHHHHhh------HHH----HHHHH-hH------------
Confidence 479999999999999886 6788888776 665 13322211110 011 11111 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhC-CCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~-Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
.+.+...+.|.+.......+++||+.++|+.|+++ |++++|+|| +....++.+++.+|+ |+.. ++
T Consensus 54 -~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~---~~~~~~~~~l~~~gl---f~~i-~~------ 119 (193)
T 2i7d_A 54 -DLADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTS---PLLKYHHCVGEKYRW---VEQH-LG------ 119 (193)
T ss_dssp -THHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEEC---CCSSCTTTHHHHHHH---HHHH-HC------
T ss_pred -HHHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeC---CChhhHHHHHHHhCc---hhhh-cC------
Confidence 11223333333321123467899999999999999 999999999 556677788888887 5432 11
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
..+++++|++|++|++
T Consensus 120 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 120 ----------------------------------------------------------------PQFVERIILTRDKTVV 135 (193)
T ss_dssp ----------------------------------------------------------------HHHHTTEEECSCGGGB
T ss_pred ----------------------------------------------------------------HHHHHHcCCCcccEEE
Confidence 1247789999999999
Q ss_pred EcCChhh----HHHHH-HcCCCEEEecC
Q 019086 323 IAGSQSG----VAGAQ-RIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~D----i~aA~-~aG~~~i~v~~ 345 (346)
|||+.+| +.+|+ ++||.+|++.+
T Consensus 136 vgDs~~dD~~~i~~A~~~aG~~~i~~~~ 163 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQEETPSWEHILFTC 163 (193)
T ss_dssp CCSEEEESSSCCCSSCSSCSSEEEEECC
T ss_pred ECCchhhCcHHHhhcccccccceEEEEe
Confidence 9999998 99999 99999999865
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-17 Score=149.97 Aligned_cols=99 Identities=9% Similarity=0.043 Sum_probs=73.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~ 264 (346)
+.||+.++|+.|+++|++++|+||. ....++.+++. +.++|+..+.+. ..+..
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~---~~~~~~~~l~~--l~~~f~~i~~~~--------------~~~~~-------- 141 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGR---SPTKTETVSKT--LADNFHIPATNM--------------NPVIF-------- 141 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECS---CCCSSCCHHHH--HHHHTTCCTTTB--------------CCCEE--------
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHH--HHHhcCcccccc--------------chhhh--------
Confidence 5789999999999999999999994 33334444444 444554421111 00000
Q ss_pred HHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
...||+|++ |..+++++|+ |+||||+.+|+.+|+++||.+|+|.
T Consensus 142 ------------------~~~KP~p~~--------------~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 142 ------------------AGDKPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp ------------------CCCCTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred ------------------cCCCCCHHH--------------HHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 112888888 9999999998 9999999999999999999999987
Q ss_pred CC
Q 019086 345 SR 346 (346)
Q Consensus 345 ~~ 346 (346)
++
T Consensus 186 ~g 187 (211)
T 2b82_A 186 RA 187 (211)
T ss_dssp CC
T ss_pred cC
Confidence 63
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.4e-18 Score=151.06 Aligned_cols=157 Identities=15% Similarity=0.043 Sum_probs=108.5
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+++++|+|||||||+|+... +..+|++++.+++. ++.+.+ .+ -.... . +..+. .+.
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~~----~~~~~~---~~---~~~~~---~-~~~~~------~~~--- 57 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGG-FLRKFRARFPDQPF----IALEDR---RG---FWVSE---Q-YGRLR------PGL--- 57 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSCC----CCGGGC---CS---SCHHH---H-HHHHS------TTH---
T ss_pred CCceEEEEeCCCCCccCcHH-HHHHHHHHHhcCCC----CCHHHh---cC---CcHHH---H-HHhcC------HHH---
Confidence 35689999999999999986 77888888877631 222211 11 01111 1 11121 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhC-CCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecchhh
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEE 239 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~-Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~e 239 (346)
.+.+ ...|.+.......+++||+.++|+.|+++ |++++|+|| +....++..++++|+.+ +|+.
T Consensus 58 -~~~~----~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~---~~~~~~~~~l~~~~l~~~~f~~------- 122 (197)
T 1q92_A 58 -SEKA----ISIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTS---PIKMFKYCPYEKYAWVEKYFGP------- 122 (197)
T ss_dssp -HHHH----HHHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEEC---CCSCCSSHHHHHHHHHHHHHCG-------
T ss_pred -HHHH----HHHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeC---CccchHHHHHHHhchHHHhchH-------
Confidence 1111 12232221123467999999999999999 999999999 55566777888888876 6541
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
.+++++|++|++
T Consensus 123 --------------------------------------------------------------------~~~~~l~~~~~~ 134 (197)
T 1q92_A 123 --------------------------------------------------------------------DFLEQIVLTRDK 134 (197)
T ss_dssp --------------------------------------------------------------------GGGGGEEECSCS
T ss_pred --------------------------------------------------------------------HHHHHhccCCcc
Confidence 136789999999
Q ss_pred EEEEcCChhh----HHHHH-HcCCCEEEecC
Q 019086 320 CFLIAGSQSG----VAGAQ-RIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~D----i~aA~-~aG~~~i~v~~ 345 (346)
|++|||+..| +.+|+ ++||.+|++.+
T Consensus 135 ~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~ 165 (197)
T 1q92_A 135 TVVSADLLIDDRPDITGAEPTPSWEHVLFTA 165 (197)
T ss_dssp TTSCCSEEEESCSCCCCSCSSCSSEEEEECC
T ss_pred EEEECcccccCCchhhhcccCCCceEEEecC
Confidence 9999999998 99999 99999999875
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.7e-16 Score=141.91 Aligned_cols=103 Identities=11% Similarity=0.042 Sum_probs=72.9
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhH--HHH-HHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRI--ARS-VVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~--~~~-~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
...++||+.++++.|+ +|+++ |+||.. ... ... +....++..+ |+.++..+.+..+
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~---~~~~~~~~~~~~~~~l~~~---------------f~~~~~~~~~~~~- 182 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPD---KNIPTERGLLPGAGSVVTF---------------VETATQTKPVYIG- 182 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCC---SEEEETTEEEECHHHHHHH---------------HHHHHTCCCEECS-
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCC---CcccCCCCcccCCcHHHHH---------------HHHHhCCCccccC-
Confidence 3457899999999997 89997 889942 211 000 1111122232 3333333333222
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIG 337 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG 337 (346)
||+|.+ |+.+++++|++|++|+||||+ .+||.+|+++|
T Consensus 183 ---------------------------KP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG 221 (264)
T 1yv9_A 183 ---------------------------KPKAII--------------MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNG 221 (264)
T ss_dssp ---------------------------TTSHHH--------------HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHT
T ss_pred ---------------------------CCCHHH--------------HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcC
Confidence 777777 999999999999999999999 59999999999
Q ss_pred CCEEEecCC
Q 019086 338 MPCVVMRSR 346 (346)
Q Consensus 338 ~~~i~v~~~ 346 (346)
|.+|+|.++
T Consensus 222 ~~~i~v~~g 230 (264)
T 1yv9_A 222 IDSLLVTSG 230 (264)
T ss_dssp CEEEEETTS
T ss_pred CcEEEECCC
Confidence 999999753
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-17 Score=140.98 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=73.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|+++|++++|+|| +....++.+ +.+|+..+++..+... + +..+
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~-~~~~~~~~~~~~~~~~-~--------------~~~~----- 133 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISG---SFEEVLEPF-KELGDEFMANRAIFED-G--------------KFQG----- 133 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEE---EETTTSGGG-TTTSSEEEEEEEEEET-T--------------EEEE-----
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeC---CcHHHHHHH-HHcCchhheeeEEeeC-C--------------ceEC-----
Confidence 57999999999999999999999999 566777777 8889887643322111 1 1000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.+|.+.. ...+++.+ ++++|++|||+.+|+.||+.+|+.+++
T Consensus 134 ----------------------~~~~~~~--------------k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~ 175 (201)
T 4ap9_A 134 ----------------------IRLRFRD--------------KGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAV 175 (201)
T ss_dssp ----------------------EECCSSC--------------HHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEE
T ss_pred ----------------------CcCCccC--------------HHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEE
Confidence 0344433 45566666 899999999999999999999997554
Q ss_pred e
Q 019086 343 M 343 (346)
Q Consensus 343 v 343 (346)
.
T Consensus 176 ~ 176 (201)
T 4ap9_A 176 G 176 (201)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.63 E-value=7.2e-16 Score=144.21 Aligned_cols=86 Identities=9% Similarity=0.096 Sum_probs=73.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~---------------------------- 210 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEVL---------------------------- 210 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSCC----------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCceeeeecC----------------------------
Confidence 57899999999999999999999999 67788999999999988775421
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
| .+ ...+++++++. ++|++|||+.+|+.+|+++|+.+
T Consensus 211 ------------------------~-------~~---------K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v 247 (287)
T 3a1c_A 211 ------------------------P-------HQ---------KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGI 247 (287)
T ss_dssp ------------------------T-------TC---------HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEE
T ss_pred ------------------------h-------HH---------HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeE
Confidence 0 00 34568899999 99999999999999999999973
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-16 Score=134.37 Aligned_cols=88 Identities=16% Similarity=0.087 Sum_probs=75.5
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHH
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 266 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~ 266 (346)
|+..++|+.|+++|++++|+|| +....++.+++.+|+..+|+.
T Consensus 39 ~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~~~~---------------------------------- 81 (162)
T 2p9j_A 39 VLDGIGIKLLQKMGITLAVISG---RDSAPLITRLKELGVEEIYTG---------------------------------- 81 (162)
T ss_dssp HHHHHHHHHHHTTTCEEEEEES---CCCHHHHHHHHHTTCCEEEEC----------------------------------
T ss_pred ccHHHHHHHHHHCCCEEEEEeC---CCcHHHHHHHHHcCCHhhccC----------------------------------
Confidence 4457999999999999999999 667889999999999876542
Q ss_pred HHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 267 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
.||+|.+ |+.+++++|++|++|++|||+.+|+.+|+.+|+.+++.
T Consensus 82 ------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 82 ------------------SYKKLEI--------------YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp ------------------C--CHHH--------------HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred ------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 1666666 99999999999999999999999999999999997754
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-16 Score=143.79 Aligned_cols=41 Identities=22% Similarity=0.376 Sum_probs=39.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++|++|||+. +|+.||+.+|+.+++|.++
T Consensus 196 ~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g 237 (271)
T 2x4d_A 196 FKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG 237 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred HHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCC
Confidence 9999999999999999999998 9999999999999999763
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-17 Score=138.53 Aligned_cols=83 Identities=19% Similarity=0.128 Sum_probs=73.9
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
+|+.|+++|++++|+|| +....++.+++.+|+..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~~~~~-------------------------------------- 77 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTG---EKTEIVRRRAEKLKVDYLFQGV-------------------------------------- 77 (164)
T ss_dssp HHHHHHHTTCCEEEECS---SCCHHHHHHHHHTTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeC---CChHHHHHHHHHcCCCEeeccc--------------------------------------
Confidence 78999999999999999 6778999999999998876531
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
||+|.+ |+.+++++|+++++|++|||+.+|+.+|+++|+.+++.
T Consensus 78 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 121 (164)
T 3e8m_A 78 --------------VDKLSA--------------AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA 121 (164)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC
Confidence 666666 99999999999999999999999999999999987753
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=5.4e-16 Score=142.39 Aligned_cols=41 Identities=10% Similarity=0.139 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|++|++|++|||+. +|+.||+.+|+.+|+|.++
T Consensus 201 ~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g 242 (271)
T 1vjr_A 201 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTG 242 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSS
T ss_pred HHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence 9999999999999999999995 9999999999999999763
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.60 E-value=8.3e-17 Score=145.05 Aligned_cols=82 Identities=9% Similarity=0.056 Sum_probs=72.2
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
+|+.|+++|++++|+|+ +....++.+++.+|+..+|+..
T Consensus 84 ~L~~L~~~G~~l~I~T~---~~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 122 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITG---RRAKLLEDRANTLGITHLYQGQ-------------------------------------- 122 (211)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCchhhccc--------------------------------------
Confidence 88999999999999999 6778999999999999876541
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
||.|.+ ++.+++++|+++++|++|||+.+|+.+++++|+.+++
T Consensus 123 --------------k~K~~~--------------l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~ 165 (211)
T 3ij5_A 123 --------------SDKLVA--------------YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV 165 (211)
T ss_dssp --------------SSHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe
Confidence 344444 9999999999999999999999999999999998765
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-16 Score=139.17 Aligned_cols=81 Identities=11% Similarity=0.138 Sum_probs=70.4
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
+|+.|+++|++++|+|| +....++.+++.+|++ +|...
T Consensus 47 ~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~lgi~-~~~~~-------------------------------------- 84 (176)
T 3mmz_A 47 GIAALRKSGLTMLILST---EQNPVVAARARKLKIP-VLHGI-------------------------------------- 84 (176)
T ss_dssp HHHHHHHTTCEEEEEES---SCCHHHHHHHHHHTCC-EEESC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEEC---cChHHHHHHHHHcCCe-eEeCC--------------------------------------
Confidence 88999999999999999 6788999999999998 43320
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
||.+.+ ++.+++++|+++++|++|||+.+|+.+++.+|+.+++
T Consensus 85 --------------~~k~~~--------------l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~ 127 (176)
T 3mmz_A 85 --------------DRKDLA--------------LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV 127 (176)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC
Confidence 455554 9999999999999999999999999999999987665
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-16 Score=139.59 Aligned_cols=82 Identities=11% Similarity=0.135 Sum_probs=70.9
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
+|+.|+++|++++|+|| +....++.+++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~lgl~~~f~~~-------------------------------------- 92 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISG---RKTAIVERRAKSLGIEHLFQGR-------------------------------------- 92 (189)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHHTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEEC---cChHHHHHHHHHcCCHHHhcCc--------------------------------------
Confidence 88999999999999999 6788999999999999876541
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++.|.+ ++.+++++|+++++|++|||+.+|+.+++++|+.+++
T Consensus 93 --------------~~K~~~--------------~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~ 135 (189)
T 3mn1_A 93 --------------EDKLVV--------------LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV 135 (189)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe
Confidence 111133 8999999999999999999999999999999998664
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.2e-16 Score=140.54 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=69.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+ +.+++
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~~-~~~k~----------------------- 196 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTG---DNRFVAKWVAEELGLDDYFAEVL-PHEKA----------------------- 196 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSCC-GGGHH-----------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCChhHhHhcC-HHHHH-----------------------
Confidence 5889999999999999999999999 67888999999999998887632 22111
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
...||.|+. + +|++|||+.||+.|++.||+.+++
T Consensus 197 -------------------~~~k~~~~~--------------~------------~~~~vGD~~nDi~~~~~Ag~~va~ 230 (280)
T 3skx_A 197 -------------------EKVKEVQQK--------------Y------------VTAMVGDGVNDAPALAQADVGIAI 230 (280)
T ss_dssp -------------------HHHHHHHTT--------------S------------CEEEEECTTTTHHHHHHSSEEEEC
T ss_pred -------------------HHHHHHHhc--------------C------------CEEEEeCCchhHHHHHhCCceEEe
Confidence 112455444 3 799999999999999999985443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-15 Score=134.38 Aligned_cols=82 Identities=15% Similarity=0.119 Sum_probs=71.7
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|+.|+++|++++|+|| +....++.+++.+|+..+|...
T Consensus 60 ~l~~L~~~G~~~~ivT~---~~~~~~~~~l~~lgi~~~~~~~-------------------------------------- 98 (195)
T 3n07_A 60 GVKALMNAGIEIAIITG---RRSQIVENRMKALGISLIYQGQ-------------------------------------- 98 (195)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHTTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEEC---cCHHHHHHHHHHcCCcEEeeCC--------------------------------------
Confidence 47889999999999999 7789999999999998765431
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
||.+.. ++.+++++|+++++|++|||+.||+.+++++|+.+++
T Consensus 99 --------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~ 141 (195)
T 3n07_A 99 --------------DDKVQA--------------YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV 141 (195)
T ss_dssp --------------SSHHHH--------------HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC
T ss_pred --------------CCcHHH--------------HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE
Confidence 455554 9999999999999999999999999999999998764
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1e-14 Score=144.13 Aligned_cols=99 Identities=18% Similarity=0.228 Sum_probs=77.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCC------Cc---hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGK------SG---DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~------~~---~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~ 255 (346)
++||+.++|+.|+++|++++|+||... .. ...+..+++.+|+. |+..+ +. +.+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~-~~--------------~~~~ 150 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLV-AT--------------HAGL 150 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEE-EC--------------SSST
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEE-EC--------------CCCC
Confidence 789999999999999999999999310 00 12377888889984 55432 22 2221
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCCh----
Q 019086 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 327 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg----v~p~e~i~VGDs~---- 327 (346)
.+||+|++ |+.+++++| +++++|+||||+.
T Consensus 151 ----------------------------~~KP~p~~--------------~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~ 188 (416)
T 3zvl_A 151 ----------------------------NRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 188 (416)
T ss_dssp ----------------------------TSTTSSHH--------------HHHHHHHSSTTCCCCGGGCEEECSCSCBCT
T ss_pred ----------------------------CCCCCHHH--------------HHHHHHHhCCCCCCCHHHeEEEECCCCCcc
Confidence 23888888 999999997 9999999999997
Q ss_pred -------------hhHHHHHHcCCCEEE
Q 019086 328 -------------SGVAGAQRIGMPCVV 342 (346)
Q Consensus 328 -------------~Di~aA~~aG~~~i~ 342 (346)
.|+.+|+++|+.++.
T Consensus 189 ~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 189 NWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp TSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred cccccccccCCChhhHHHHHHcCCcccC
Confidence 899999999999864
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-15 Score=130.71 Aligned_cols=85 Identities=14% Similarity=0.035 Sum_probs=73.7
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHH
Q 019086 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKA 269 (346)
Q Consensus 190 ~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~ 269 (346)
.++|+.|+++|++++++|| .....+..+++.+|+..+|+..
T Consensus 41 ~~~l~~L~~~G~~~~i~Tg---~~~~~~~~~~~~lgl~~~~~~~------------------------------------ 81 (180)
T 1k1e_A 41 GLGIKMLMDADIQVAVLSG---RDSPILRRRIADLGIKLFFLGK------------------------------------ 81 (180)
T ss_dssp HHHHHHHHHTTCEEEEEES---CCCHHHHHHHHHHTCCEEEESC------------------------------------
T ss_pred HHHHHHHHHCCCeEEEEeC---CCcHHHHHHHHHcCCceeecCC------------------------------------
Confidence 3789999999999999999 6678899999999998765321
Q ss_pred hhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 270 VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 270 ~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
||.+.+ ++.+++++|+++++|++|||+.+|+.+++.+|+.+++.
T Consensus 82 ----------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 125 (180)
T 1k1e_A 82 ----------------LEKETA--------------CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 125 (180)
T ss_dssp ----------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred ----------------CCcHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence 455555 99999999999999999999999999999999998754
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.3e-15 Score=130.70 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=72.5
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|+.|+++|++++|+|| +....++.+++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn---~~~~~~~~~l~~lgl~~~~~~~-------------------------------------- 92 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITT---AQNAVVDHRMEQLGITHYYKGQ-------------------------------------- 92 (191)
T ss_dssp HHHHHHHTTCEEEEECS---CCSHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEeC---cChHHHHHHHHHcCCccceeCC--------------------------------------
Confidence 47889999999999999 6788999999999999876541
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
||.|.+ ++.+++++|+++++|++|||+.+|+.+++.+|+.+++
T Consensus 93 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 135 (191)
T 3n1u_A 93 --------------VDKRSA--------------YQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV 135 (191)
T ss_dssp --------------SSCHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe
Confidence 566666 9999999999999999999999999999999998754
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=6.3e-15 Score=138.69 Aligned_cols=103 Identities=13% Similarity=0.038 Sum_probs=74.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHH--H-HHHHHhC-cccchhheecchhhHHHhhhhccccccccccCc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R-SVVEKLG-SERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~--~-~~l~~lg-l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
..++|++.++++.|+++|+ ++++||.. .... . ..+..+| +.. +|+.+...+.+..+
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~---~~~~~~~~~~~~~~g~l~~---------------~~~~~~~~~~~~~~- 214 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRD---PWHPLSDGSRTPGTGSLAA---------------AVETASGRQALVVG- 214 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCC---CEEECTTSCEEECHHHHHH---------------HHHHHHTCCCEECS-
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCC---ccccCCCCCcCCCCcHHHH---------------HHHHHhCCCceeeC-
Confidence 3457899999999999999 99999942 2211 0 1111111 222 34444444433333
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIG 337 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG 337 (346)
||+|.+ |+.+++++|++|++|++|||+. +||.||+++|
T Consensus 215 ---------------------------KP~~~~--------------~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG 253 (306)
T 2oyc_A 215 ---------------------------KPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCG 253 (306)
T ss_dssp ---------------------------TTSTHH--------------HHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred ---------------------------CCCHHH--------------HHHHHHHcCCChHHEEEECCCchHHHHHHHHCC
Confidence 777777 9999999999999999999996 9999999999
Q ss_pred CCEEEecCC
Q 019086 338 MPCVVMRSR 346 (346)
Q Consensus 338 ~~~i~v~~~ 346 (346)
+.+++|.++
T Consensus 254 ~~~i~v~~g 262 (306)
T 2oyc_A 254 MTTVLTLTG 262 (306)
T ss_dssp CEEEEESSS
T ss_pred CeEEEECCC
Confidence 999999763
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-15 Score=138.70 Aligned_cols=98 Identities=11% Similarity=0.218 Sum_probs=72.2
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHH--H--HHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R--SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~--~--~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
...++++.|+++|++ +|+||.. .... . .++...|+..+|+ .++.++.+..+
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~---~~~~~~~~~~~~~~~~l~~~f~---------------~~~~~~~~~~~------ 203 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTD---NTYPLTKTDVAIAIGGVATMIE---------------SILGRRFIRFG------ 203 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCC---SEEECSSSCEEECHHHHHHHHH---------------HHHCSCEEEES------
T ss_pred cHHHHHHHHhcCCCe-EEEECCC---ccccCcCCCccccCChHHHHHH---------------HHhCCceeEec------
Confidence 677778899999999 9999942 2222 1 1123334444443 33333333333
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc----CCCCCcEEEEcCCh-hhHHHHHHcCC
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA----EKPVRNCFLIAGSQ-SGVAGAQRIGM 338 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l----gv~p~e~i~VGDs~-~Di~aA~~aG~ 338 (346)
||+|.+ |+.+++++ |++|++|+||||+. +||.+|+++||
T Consensus 204 ----------------------KP~p~~--------------~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~ 247 (284)
T 2hx1_A 204 ----------------------KPDSQM--------------FMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGL 247 (284)
T ss_dssp ----------------------TTSSHH--------------HHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred ----------------------CCCHHH--------------HHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCC
Confidence 788888 99999999 99999999999995 99999999999
Q ss_pred CEEEecCC
Q 019086 339 PCVVMRSR 346 (346)
Q Consensus 339 ~~i~v~~~ 346 (346)
.+|+|.++
T Consensus 248 ~~i~v~~g 255 (284)
T 2hx1_A 248 DTALVLTG 255 (284)
T ss_dssp EEEEESSS
T ss_pred eEEEECCC
Confidence 99999763
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.1e-14 Score=126.20 Aligned_cols=83 Identities=11% Similarity=0.095 Sum_probs=72.7
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
+|+.|+++|++++|+|| +....++.+++.+|+..+|..
T Consensus 61 ~l~~L~~~g~~v~ivT~---~~~~~~~~~l~~lgl~~~~~~--------------------------------------- 98 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITG---RKAKLVEDRCATLGITHLYQG--------------------------------------- 98 (188)
T ss_dssp HHHHHHTTTCEEEEECS---SCCHHHHHHHHHHTCCEEECS---------------------------------------
T ss_pred HHHHHHHCCCeEEEEeC---CChHHHHHHHHHcCCceeecC---------------------------------------
Confidence 88899999999999999 667889999999999876532
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
.||.|.+ |+.+++++|+++++|++|||+.+|+.+|+.+|+.+++.
T Consensus 99 -------------~kpk~~~--------------~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 99 -------------QSNKLIA--------------FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp -------------CSCSHHH--------------HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred -------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 1566666 99999999999999999999999999999999988753
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.7e-13 Score=123.35 Aligned_cols=41 Identities=15% Similarity=0.279 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++|++|||+ .+|+.||+++|+.+++|.++
T Consensus 193 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g 234 (268)
T 3qgm_A 193 MREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTG 234 (268)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS
T ss_pred HHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCC
Confidence 999999999999999999999 59999999999999999763
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-14 Score=133.00 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=70.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHH--HHHHHH-hCcccchhheecchhhHHHhhhhccccccccccCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--RSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~--~~~l~~-lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~ 259 (346)
..++|++.++++.|+ +|+++ |+||.. .... ..++.. .++.. +|+.++..+.+..+
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~---~~~~~~~~~l~~~~~l~~---------------~~~~~~~~~~~~~~-- 186 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPD---ATLPGEEGIYPGAGSIIA---------------ALKVATNVEPIIIG-- 186 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCC---SEEEETTEEEECHHHHHH---------------HHHHHHCCCCEECS--
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCC---ccccCCCCCcCCcHHHHH---------------HHHHHhCCCccEec--
Confidence 457899999999999 89998 999942 2211 011111 12222 33333333333333
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGM 338 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~ 338 (346)
||+|.+ |+.++++ ++|++|+||||+. +||.+|+++||
T Consensus 187 --------------------------KP~~~~--------------~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~ 224 (263)
T 1zjj_A 187 --------------------------KPNEPM--------------YEVVREM--FPGEELWMVGDRLDTDIAFAKKFGM 224 (263)
T ss_dssp --------------------------TTSHHH--------------HHHHHHH--STTCEEEEEESCTTTHHHHHHHTTC
T ss_pred --------------------------CCCHHH--------------HHHHHHh--CCcccEEEECCChHHHHHHHHHcCC
Confidence 777777 9999998 9999999999996 99999999999
Q ss_pred CEEEecCC
Q 019086 339 PCVVMRSR 346 (346)
Q Consensus 339 ~~i~v~~~ 346 (346)
.+|+|.++
T Consensus 225 ~~i~v~~g 232 (263)
T 1zjj_A 225 KAIMVLTG 232 (263)
T ss_dssp EEEEESSS
T ss_pred eEEEECCC
Confidence 99999753
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.8e-14 Score=126.92 Aligned_cols=113 Identities=14% Similarity=0.181 Sum_probs=83.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCch---------------hHHHHHHHHhCcccchhheecchhhHHHhhhhc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 247 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~---------------~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~ 247 (346)
.+++||+.++|+.|+++|++++|+|| +.. ..+...++.+|+. |+..+.+..... +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~----g~ 125 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTN---QSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA----GV 125 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEE---CHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT----CC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcC---cCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC----Cc
Confidence 45899999999999999999999999 555 5778888998875 322111110000 00
Q ss_pred cc-cccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 019086 248 FV-LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (346)
Q Consensus 248 i~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs 326 (346)
++ ..+.+ ...||+|.+ |+.+++++|++|++|+||||+
T Consensus 126 ~~~~~~~~----------------------------~~~KP~~~~--------------~~~~~~~~~i~~~~~~~VGD~ 163 (218)
T 2o2x_A 126 GPLAIPDH----------------------------PMRKPNPGM--------------LVEAGKRLALDLQRSLIVGDK 163 (218)
T ss_dssp STTCCSSC----------------------------TTSTTSCHH--------------HHHHHHHHTCCGGGCEEEESS
T ss_pred eeecccCC----------------------------ccCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCC
Confidence 00 00111 123777777 999999999999999999999
Q ss_pred hhhHHHHHHcCCCE-EEecCC
Q 019086 327 QSGVAGAQRIGMPC-VVMRSR 346 (346)
Q Consensus 327 ~~Di~aA~~aG~~~-i~v~~~ 346 (346)
.+||.+|+++||.+ |+|.++
T Consensus 164 ~~Di~~a~~aG~~~~i~v~~g 184 (218)
T 2o2x_A 164 LADMQAGKRAGLAQGWLVDGE 184 (218)
T ss_dssp HHHHHHHHHTTCSEEEEETCC
T ss_pred HHHHHHHHHCCCCEeEEEecC
Confidence 99999999999999 998763
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.5e-14 Score=131.34 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++.+++++|+++++|++|||+.+|+.|++.+|+.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 216 VTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred HHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence 9999999999999999999999999999999977554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=125.54 Aligned_cols=41 Identities=5% Similarity=0.189 Sum_probs=39.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++|++|||+ .+||.||+++|+.+|+|.++
T Consensus 188 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g 229 (264)
T 3epr_A 188 MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTG 229 (264)
T ss_dssp HHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred HHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCC
Confidence 999999999999999999999 69999999999999999763
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=6e-15 Score=136.65 Aligned_cols=90 Identities=13% Similarity=0.207 Sum_probs=76.6
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..+++||+.++|+.|+++|++++++|| +....++.+++.+|+.++|+..+
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~~--------------------------- 183 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSG---DKEDKVKELSKELNIQEYYSNLS--------------------------- 183 (263)
Confidence 356899999999999999999999999 67788999999999988776421
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
|.. +..++++++.++++|+||||+.+|+.+++++|+...
T Consensus 184 ---------------------------p~~--------------k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va 222 (263)
T 2yj3_A 184 ---------------------------PED--------------KVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVA 222 (263)
Confidence 111 566788999999999999999999999999998754
Q ss_pred E
Q 019086 342 V 342 (346)
Q Consensus 342 ~ 342 (346)
+
T Consensus 223 ~ 223 (263)
T 2yj3_A 223 M 223 (263)
Confidence 4
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.39 E-value=7.3e-13 Score=114.71 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=52.5
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++|+|||||||+|+... +..+|++ .+|.+ ++.+.+ . |.... .. ++. ..+
T Consensus 4 ~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~---~~~~~~---~----g~~~~--~~----~~~----~~~------ 53 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGA-VVKAVNE---RADLN---IKMESL---N----GKKLK--HM----IPE----HEG------ 53 (180)
T ss_dssp CCEEEEETBTTTBCHHHH-HHHHHHH---HSCCC---CCGGGC---T----TCCC------------------C------
T ss_pred ccEEEEeCCCcccccHHH-HHHHHHH---HhCCC---CCHHHH---c----CccHH--HH----CCc----hHH------
Confidence 589999999999999885 5566655 56765 332221 1 11100 00 110 000
Q ss_pred HHHHHHHHHHHH-HHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 164 KNVLQEKKNALD-EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 164 ~~l~~~~~~~~~-~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
. ..+.+. ... ....+++||+.++|+.|+++ ++++|+||.
T Consensus 54 -~----~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 54 -L----VMDILKEPGF-FRNLDVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp -H----HHHHHHSTTG-GGSCCBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred -H----HHHHHhCcch-hccCCCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 1 111111 111 22467999999999999995 999999994
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.4e-12 Score=116.10 Aligned_cols=40 Identities=8% Similarity=0.268 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+++++|++++++++|||+ .+||.||+.+|+.+++|.+
T Consensus 189 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~ 229 (266)
T 3pdw_A 189 MEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHT 229 (266)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECC
Confidence 999999999999999999999 7999999999999999975
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.37 E-value=4e-13 Score=123.85 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++.+++++|++++++++|||+.||++|++.||+..++
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 202 LSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 9999999999999999999999999999999976553
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-12 Score=119.50 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|+++++|++|||+.||++|++.||+..++
T Consensus 206 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 243 (290)
T 3dnp_A 206 GLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM 243 (290)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe
Confidence 39999999999999999999999999999999987654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.35 E-value=5.4e-13 Score=121.85 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|+++++|++|||+.||++|++.+|+.+++
T Consensus 187 ~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam 224 (258)
T 2pq0_A 187 GIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM 224 (258)
T ss_dssp HHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence 48999999999999999999999999999999997764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=7.2e-13 Score=115.15 Aligned_cols=37 Identities=11% Similarity=0.076 Sum_probs=35.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++.+++++|+++++|++|||+.||+.|++.+|+.+++
T Consensus 88 l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~ 124 (168)
T 3ewi_A 88 VDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP 124 (168)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe
Confidence 8999999999999999999999999999999998664
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-12 Score=122.39 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=80.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH--------hCcccchhheecchhhHHHhhhhcccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK--------LGSERISKIKIVGNEEVERSLYGQFVLGKGI 254 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~--------lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v 254 (346)
..++||+.++|+.|+++|++++|+||........+...++. +|+ .|+..+.+. +.
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~-~~-------------- 249 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQRE-QG-------------- 249 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECC-TT--------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cchheeecc-CC--------------
Confidence 34699999999999999999999999543223334566777 888 355533222 11
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc-EEEEcCChhhHHHH
Q 019086 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN-CFLIAGSQSGVAGA 333 (346)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e-~i~VGDs~~Di~aA 333 (346)
..||+|++ +..++++++.++.+ |++|||+..||.+|
T Consensus 250 -----------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~~~~vgD~~~di~~a 286 (301)
T 1ltq_A 250 -----------------------------DTRKDDVV--------------KEEIFWKHIAPHFDVKLAIDDRTQVVEMW 286 (301)
T ss_dssp -----------------------------CCSCHHHH--------------HHHHHHHHTTTTCEEEEEEECCHHHHHHH
T ss_pred -----------------------------CCcHHHHH--------------HHHHHHHHhccccceEEEeCCcHHHHHHH
Confidence 01677777 89999999888755 79999999999999
Q ss_pred HHcCCCEEEecCC
Q 019086 334 QRIGMPCVVMRSR 346 (346)
Q Consensus 334 ~~aG~~~i~v~~~ 346 (346)
+++||.+|.|+++
T Consensus 287 ~~aG~~~~~v~~G 299 (301)
T 1ltq_A 287 RRIGVECWQVASG 299 (301)
T ss_dssp HHTTCCEEECSCC
T ss_pred HHcCCeEEEecCC
Confidence 9999999999875
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-12 Score=120.16 Aligned_cols=51 Identities=18% Similarity=0.293 Sum_probs=39.0
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc--cchhh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKI 232 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~--~~f~~ 232 (346)
..++.||+.++|+.|+++|++++|+||........+...++.+|+. .+++.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~v 151 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHI 151 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTE
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceE
Confidence 3568999999999999999999999993211144566778888988 44443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-12 Score=117.46 Aligned_cols=38 Identities=5% Similarity=0.195 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
++.+++++|++++++++|||+.+|+.|++.+|+.+ .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~ 195 (231)
T 1wr8_A 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV-AVA 195 (231)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEE-ECT
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-Eec
Confidence 99999999999999999999999999999999984 343
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=5.7e-12 Score=116.03 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=32.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+++.+++++|++++++++|||+.||++|++.||+..+
T Consensus 201 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va 237 (279)
T 3mpo_A 201 TLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVA 237 (279)
T ss_dssp HHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECB
T ss_pred HHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceee
Confidence 3999999999999999999999999999999997654
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.28 E-value=2e-12 Score=120.20 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 215 ~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam 252 (283)
T 3dao_A 215 ALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV 252 (283)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence 38999999999999999999999999999999977654
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-12 Score=123.08 Aligned_cols=38 Identities=5% Similarity=-0.053 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.||+..++
T Consensus 232 al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam 269 (304)
T 3l7y_A 232 ALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM 269 (304)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred HHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence 38999999999999999999999999999999976554
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.6e-12 Score=119.23 Aligned_cols=45 Identities=2% Similarity=-0.014 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 295 SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
...+++.. ++.+++++|+++++|++|||+.||+.|++.+|+.+++
T Consensus 184 ~~~~K~~~---~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~ 228 (261)
T 2rbk_A 184 KGDTKQKG---IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM 228 (261)
T ss_dssp TTCSHHHH---HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred CCCChHHH---HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe
Confidence 34445554 9999999999999999999999999999999996554
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=4.1e-11 Score=109.50 Aligned_cols=44 Identities=9% Similarity=0.010 Sum_probs=37.6
Q ss_pred CchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 296 PESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 296 ~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..+++.. ++.+++++|++++++++|||+.||++|++.||+..++
T Consensus 198 ~~~K~~~---l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 241 (274)
T 3fzq_A 198 DFHKGKA---IKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM 241 (274)
T ss_dssp TCSHHHH---HHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred CCCHHHH---HHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence 3344444 8999999999999999999999999999999976654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.3e-11 Score=112.19 Aligned_cols=36 Identities=8% Similarity=-0.041 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
++.+++++|+++++|++|||+.||++|++.+|+..+
T Consensus 196 ~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va 231 (271)
T 1rlm_A 196 ISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA 231 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE
Confidence 999999999999999999999999999999999654
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.07 E-value=1e-10 Score=108.52 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 213 al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm 250 (285)
T 3pgv_A 213 ALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM 250 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc
Confidence 38999999999999999999999999999999977654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3e-10 Score=109.75 Aligned_cols=31 Identities=23% Similarity=0.533 Sum_probs=28.5
Q ss_pred CCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 316 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 316 ~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
++++++||||+. .||.+|+++||.+|+|.++
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G 320 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG 320 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSS
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccC
Confidence 679999999999 5999999999999999863
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.00 E-value=2.9e-10 Score=105.72 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+++.+++.+|+++++|++|||+.||++|++.+|+ .+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~ 258 (288)
T 1nrw_A 220 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMG 258 (288)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECT
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEc
Confidence 4899999999999999999999999999999999 55554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=98.96 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 198 ~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam 235 (268)
T 3r4c_A 198 GLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM 235 (268)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe
Confidence 38999999999999999999999999999999987654
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.6e-09 Score=97.24 Aligned_cols=50 Identities=12% Similarity=0.224 Sum_probs=41.1
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcccchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 231 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~~~f~ 231 (346)
..+++||+.++|+.|+++|++++++||.... .+..+...|+.+|+..+++
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND 149 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence 4669999999999999999999999994322 3458888999999987553
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.91 E-value=3.1e-09 Score=95.90 Aligned_cols=37 Identities=14% Similarity=-0.018 Sum_probs=33.9
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+++.+++++|++++++++|||+.||++|++.+|+..+
T Consensus 157 ~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va 193 (227)
T 1l6r_A 157 AVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC 193 (227)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE
T ss_pred HHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEE
Confidence 3888999999999999999999999999999998643
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-09 Score=100.77 Aligned_cols=49 Identities=14% Similarity=0.174 Sum_probs=40.5
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcccch
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERIS 230 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~~~f 230 (346)
..+++||+.++|+.|+++|++|+++||.... .+..+...|+.+|+..++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~ 148 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE 148 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc
Confidence 3569999999999999999999999994322 346888889999998655
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-09 Score=103.58 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=32.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl 226 (346)
.+.|++.++|+.|++ |++++++|+ +...++....+.+++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~---~~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVIST---SYTQYLRRTASMIGV 141 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEE---EEHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEEC---CceEEEcccchhhhh
Confidence 478999999999999 999999998 444566666766666
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.75 E-value=5.6e-10 Score=99.15 Aligned_cols=97 Identities=12% Similarity=0.135 Sum_probs=79.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.+||++|++. ++++|+|+ +...+++.+++.+++..+|+.++.+. + +..+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Ts---s~~~~a~~vl~~ld~~~~f~~~l~rd-~--------------~~~~----- 122 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTA---SLAKYADPVADLLDRWGVFRARLFRE-S--------------CVFH----- 122 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCCSSCEEEEECGG-G--------------CEEE-----
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcC---CCHHHHHHHHHHhCCcccEEEEEEcc-c--------------ceec-----
Confidence 34799999999999998 99999999 77899999999999998887654322 2 1111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
| ++ |...++.+|+++++||+|||+..++.++.++|+.++.
T Consensus 123 -----------------------k---~~--------------~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 123 -----------------------R---GN--------------YVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp -----------------------T---TE--------------EECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred -----------------------C---Cc--------------eeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence 1 12 5566889999999999999999999999999998654
Q ss_pred e
Q 019086 343 M 343 (346)
Q Consensus 343 v 343 (346)
.
T Consensus 163 ~ 163 (195)
T 2hhl_A 163 W 163 (195)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.7e-09 Score=96.57 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=36.6
Q ss_pred chhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 297 ESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 297 ~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+++.+ ++.+++++|+++++|++|||+.||++|++.+|+..+
T Consensus 189 ~~K~~~---~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~ 230 (268)
T 1nf2_A 189 VDKGKA---LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230 (268)
T ss_dssp CCHHHH---HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred CChHHH---HHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE
Confidence 344444 999999999999999999999999999999999544
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.73 E-value=2.9e-08 Score=92.79 Aligned_cols=46 Identities=24% Similarity=0.474 Sum_probs=41.8
Q ss_pred cCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 180 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 180 ~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
....+++||+.++++.|+++|++++++|+ +....++.+++.+|+..
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 182 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHTTCCC
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHcCCCc
Confidence 34578999999999999999999999999 88999999999999863
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.71 E-value=5.9e-09 Score=96.68 Aligned_cols=38 Identities=13% Similarity=0.171 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
+++.+++.+|++++++++|||+.||++|++.+|+. |.+
T Consensus 202 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~ 239 (282)
T 1rkq_A 202 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAV 239 (282)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EEC
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcE-EEe
Confidence 38999999999999999999999999999999984 444
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.9e-09 Score=97.33 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCC--CcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPV--RNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p--~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|+++ +++++|||+.||+.|++.+|+..++
T Consensus 180 ~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 219 (259)
T 3zx4_A 180 AVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV 219 (259)
T ss_dssp HHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC
T ss_pred HHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe
Confidence 3899999999999 9999999999999999999987553
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.66 E-value=9.9e-08 Score=93.15 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=38.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.++||++++++.|+++|++|+|+|+ ++...++.+.+.+|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSg---g~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSA---SFIDIVRAFATDTNNN 261 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHCTTSS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCcc
Confidence 3699999999999999999999999 8899999999999874
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.65 E-value=2.9e-09 Score=93.34 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=76.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.+||++|++. ++++|+|+ +...+++.+++.+++..+|+..+... +. ...
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~---~~~~~a~~vl~~ld~~~~f~~~~~rd-~~--------------~~~----- 109 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTA---SLAKYADPVADLLDKWGAFRARLFRE-SC--------------VFH----- 109 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCTTCCEEEEECGG-GS--------------EEE-----
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcC---CCHHHHHHHHHHHCCCCcEEEEEecc-Cc--------------eec-----
Confidence 34899999999999998 99999999 77899999999999998877654322 11 100
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
| +. |...++.+|.++++||+|||+..++.++..+|+.+
T Consensus 110 -----------------------k---~~--------------~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 110 -----------------------R---GN--------------YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp -----------------------T---TE--------------EECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred -----------------------C---Cc--------------EeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 0 11 45568899999999999999999999999999985
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.56 E-value=2e-08 Score=94.44 Aligned_cols=37 Identities=3% Similarity=0.020 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+++.+++.+|++++++++|||+.||+.|++.+|+..+
T Consensus 228 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va 264 (301)
T 2b30_A 228 GINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA 264 (301)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE
Confidence 3899999999999999999999999999999999643
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=5.4e-07 Score=90.86 Aligned_cols=126 Identities=11% Similarity=0.121 Sum_probs=81.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh-C-------------cccchhheecchhhHHHhhhhc-
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------------SERISKIKIVGNEEVERSLYGQ- 247 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l-g-------------l~~~f~~~i~~~~e~~~~~f~~- 247 (346)
+...|++..+|..||+.| ++.++|| +...++..+++.+ | +.++||++|+..... .+|+.
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTN---S~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP--~FF~~~ 318 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATN---SDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKP--LFFGEG 318 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECS---SCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTT--GGGTTC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeC---CChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCC--CcccCC
Confidence 446789999999999999 9999999 7788899999987 7 346777765554322 12320
Q ss_pred ccccccc--ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcccccc--CCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 248 FVLGKGI--SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDI--DTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 248 i~~g~~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i--~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
... ..| ..|. .+..... .++...+..+= +..+++.+|++++++++|
T Consensus 319 ~pf-r~Vd~~tg~--------------------------l~~~~~~~~l~~g~vY~gGn---~~~~~~llg~~g~eVLYV 368 (555)
T 2jc9_A 319 TVL-RQVDTKTGK--------------------------LKIGTYTGPLQHGIVYSGGS---SDTICDLLGAKGKDILYI 368 (555)
T ss_dssp CCE-EEEETTTTE--------------------------ECSSCCCSCCCTTCCEEECC---HHHHHHHHTCCGGGEEEE
T ss_pred Ccc-eEeecCCCc--------------------------cccccccccccCCceeccCC---HHHHHHHhCCCCCeEEEE
Confidence 000 000 0000 0000000 00000000000 478889999999999999
Q ss_pred cCCh-hhHHHHH-HcCCCEEEec
Q 019086 324 AGSQ-SGVAGAQ-RIGMPCVVMR 344 (346)
Q Consensus 324 GDs~-~Di~aA~-~aG~~~i~v~ 344 (346)
||+. .||..++ .+||+|+.|.
T Consensus 369 GDhIftDIl~~kk~~GWrTiLVi 391 (555)
T 2jc9_A 369 GDHIFGDILKSKKRQGWRTFLVI 391 (555)
T ss_dssp ESCCCCCCHHHHHHHCCEEEEEC
T ss_pred CCEehHhHHhHHhhcCeEEEEEE
Confidence 9997 7999997 9999999874
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.37 E-value=2.4e-06 Score=77.60 Aligned_cols=37 Identities=5% Similarity=0.076 Sum_probs=33.8
Q ss_pred HHHHHHHHcCC-CCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 305 ALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 305 ~~~~~~e~lgv-~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+++.+++.+|+ +++++++|||+.||++|.+.+|+..+
T Consensus 183 al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va 220 (249)
T 2zos_A 183 AAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFI 220 (249)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEE
T ss_pred HHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEE
Confidence 48999999998 99999999999999999999998644
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.29 E-value=9.2e-06 Score=74.84 Aligned_cols=39 Identities=5% Similarity=-0.015 Sum_probs=34.7
Q ss_pred HHHHHHHHcC-CCCCc--EEEEcCChhhHHHHHHcCCCEEEec
Q 019086 305 ALRAGAEYAE-KPVRN--CFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 305 ~~~~~~e~lg-v~p~e--~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+++.+++.+| +++++ +++|||+.||+.|++.+|+. |.+.
T Consensus 193 ~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~ 234 (275)
T 1xvi_A 193 AANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVK 234 (275)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECC
T ss_pred HHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEec
Confidence 4899999999 99999 99999999999999999985 5443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.5e-05 Score=82.68 Aligned_cols=86 Identities=9% Similarity=0.105 Sum_probs=67.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
+++|++.+.|++|+++|++++++|+ .....+..+.+.+|++.++...
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~~~------------------------------ 503 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEV------------------------------ 503 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC------------------------------
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEeC------------------------------
Confidence 4789999999999999999999999 7788899999999998654321
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.|..+ ..+++.+.-. ++++||||+.||+.|.+.||+...
T Consensus 504 -----------------------------~P~~K---------~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgia 542 (645)
T 3j08_A 504 -----------------------------LPHQK---------SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIA 542 (645)
T ss_dssp -----------------------------CTTCH---------HHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEE
T ss_pred -----------------------------CHHhH---------HHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEE
Confidence 01111 2234444444 889999999999999999996544
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.3e-06 Score=84.90 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=44.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGN 237 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~ 237 (346)
..++||+.+||+++. +++.++|.|+ +...++..+++.+++.. +|...+++.
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Ta---s~~~yA~~vl~~LDp~~~~f~~ri~sr 125 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTM---GTKAYAKEVAKIIDPTGKLFQDRVLSR 125 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECS---SCHHHHHHHHHHHCTTSCSSSSCEECT
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeC---CcHHHHHHHHHHhccCCceeeeEEEEe
Confidence 458999999999999 6799999999 77899999999999987 676555543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0001 Score=70.17 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=35.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l 224 (346)
..+|++.++++.|+++|++|+|+|+ +.++.++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSa---s~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISA---AHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHhhc
Confidence 4799999999999999999999999 7789999999874
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.79 E-value=4.7e-05 Score=79.97 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=40.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|++.++
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~ 578 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVI 578 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCcEEE
Confidence 5889999999999999999999999 7788899999999998643
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.52 E-value=8.2e-05 Score=78.23 Aligned_cols=44 Identities=23% Similarity=0.496 Sum_probs=39.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
++.|++.+.|++|+++|++++++|+ .....+..+.+.+|+++++
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTG---d~~~~a~~ia~~lgi~~v~ 597 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTG---DSKRTAEAVAGTLGIKKVV 597 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHHHTCCCEE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCEEE
Confidence 5789999999999999999999999 6778899999999998643
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00022 Score=77.48 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=39.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+...
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTG---D~~~ta~~ia~~lgi~~~ 645 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFGE 645 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTSSCT
T ss_pred CCchhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCcCCC
Confidence 5789999999999999999999999 778889999999999653
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00056 Score=57.34 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=29.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.|++.+.|..|+++|++++++|+.....-..+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 3468889999999999999999993100123344555566664
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00087 Score=66.61 Aligned_cols=125 Identities=8% Similarity=-0.000 Sum_probs=79.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh---------CcccchhheecchhhHHHhhhhcccccccc-
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYGQFVLGKGI- 254 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l---------gl~~~f~~~i~~~~e~~~~~f~~i~~g~~v- 254 (346)
..|.+..+|..||++|.++-++|| ++-.++..+++.+ .+.++||++|+..... ++|+.-..-..|
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTN---S~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP--~FF~~~~~~~~v~ 261 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTN---SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKP--RFFYDNLRFLSVN 261 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECS---SCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTT--HHHHSCCCEEEEC
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeC---CCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCC--CcccCCCcceEEE
Confidence 468999999999999999999999 5667788888763 3568999887765432 345331000001
Q ss_pred -ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHH
Q 019086 255 -SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAG 332 (346)
Q Consensus 255 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~a 332 (346)
..|.-.. +....|| .++. .+= .....+.+|....++++|||+. .||..
T Consensus 262 ~~~g~l~~-------------------~~~~~~~--~vY~------gGn---~~~l~~llg~~g~~VLY~GDhi~~Di~~ 311 (470)
T 4g63_A 262 PENGTMTN-------------------VHGPIVP--GVYQ------GGN---AKKFTEDLGVGGDEILYIGDHIYGDILR 311 (470)
T ss_dssp TTTCCEEE-------------------CCSSCCS--EEEE------ECC---HHHHHHHTTCCGGGEEEEESCCCSCHHH
T ss_pred CCCCcccc-------------------cccccCC--ceee------cCc---HHHHHHHhCCCCCeEEEECCchHHHHHh
Confidence 0010000 0000011 1111 111 5677788999999999999998 79777
Q ss_pred HH-HcCCCEEEec
Q 019086 333 AQ-RIGMPCVVMR 344 (346)
Q Consensus 333 A~-~aG~~~i~v~ 344 (346)
.+ ..||+|+.|-
T Consensus 312 ~kk~~gWrT~~Ii 324 (470)
T 4g63_A 312 LKKDCNWRTALVV 324 (470)
T ss_dssp HHHSCCCEEEEEC
T ss_pred hhhccCCeEEEEh
Confidence 76 5799998873
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0014 Score=71.33 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=37.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|+++|++++++|+ .....+..+...+|+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 4689999999999999999999999 6778899999999986
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.14 E-value=5.7e-05 Score=67.23 Aligned_cols=48 Identities=15% Similarity=0.249 Sum_probs=41.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc-cchhheec
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIV 235 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~ 235 (346)
..+||+.+||+.+. ++++|+|.|+ +...+++.+++.++.. .+|+..++
T Consensus 59 ~~RPgl~eFL~~l~-~~yeivI~Ta---s~~~ya~~vl~~LDp~~~~f~~rl~ 107 (204)
T 3qle_A 59 AKRPGADYFLGYLS-QYYEIVLFSS---NYMMYSDKIAEKLDPIHAFVSYNLF 107 (204)
T ss_dssp EECTTHHHHHHHHT-TTEEEEEECS---SCHHHHHHHHHHTSTTCSSEEEEEC
T ss_pred EeCCCHHHHHHHHH-hCCEEEEEcC---CcHHHHHHHHHHhCCCCCeEEEEEE
Confidence 37999999999998 6799999999 7789999999999997 46766543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00067 Score=72.95 Aligned_cols=42 Identities=29% Similarity=0.330 Sum_probs=38.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|++|+++|+++.++|+ .....+..+...+|+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTG---D~~~TA~aIA~~lGI~~ 576 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTG---DAVGIARETSRQLGLGT 576 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHHHHHHTSSC
T ss_pred cccccHHHHHHHHhhcCceEEEEcC---CCHHHHHHHHHHcCCCc
Confidence 5789999999999999999999999 77888999999999963
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0025 Score=69.41 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=37.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+++|++.+.|++|+++|++++++|+ .....+..+.+.+|+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTG---d~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTG---DHPITAKAIAASVGII 644 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCC
Confidence 35899999999999999999999999 6678888999999985
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0014 Score=70.33 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=37.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTG---D~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 528 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEES---SCHHHHTHHHHTTTCT
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcC---CChHHHHHHHHHhCCc
Confidence 4789999999999999999999999 7778899999999995
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00088 Score=60.27 Aligned_cols=36 Identities=6% Similarity=-0.093 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
+++.+++++|++++++++|||+.||+.|++.+|+..
T Consensus 166 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~v 201 (244)
T 1s2o_A 166 ATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV 201 (244)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEE
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEE
Confidence 389999999999999999999999999999999853
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.011 Score=52.90 Aligned_cols=32 Identities=0% Similarity=-0.086 Sum_probs=26.4
Q ss_pred cCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEec
Q 019086 313 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 313 lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~ 344 (346)
+|++++++++||| +.||++|.+.+|...+.|.
T Consensus 197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~ 232 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT 232 (246)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS
T ss_pred hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee
Confidence 8999999999999 9999999999987556554
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=94.76 E-value=0.015 Score=46.95 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=14.5
Q ss_pred ceEEEEeccCccccccc
Q 019086 84 DLAVLLEVDGVLVDAYR 100 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~ 100 (346)
+|+|+|||||||++...
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 47999999999998653
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.013 Score=57.69 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=44.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGN 237 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~ 237 (346)
...+||+.+||+++. +++.|+|.|. +...++..+++.++... +|..++++.
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTa---s~~~YA~~Vl~~LDp~~~~f~~Rl~sR 133 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTM---GTKAYAKEVAKIIDPTGKLFQDRVLSR 133 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECS---SCHHHHHHHHHHHCTTSTTTTTCEECT
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcC---CCHHHHHHHHHHhccCCccccceEEEe
Confidence 458999999999998 5799999999 77899999999999987 677766643
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=0.015 Score=52.36 Aligned_cols=35 Identities=3% Similarity=-0.120 Sum_probs=28.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCC----hhhHHHHHHcCCCEEEec
Q 019086 306 LRAGAEYAEKPVRNCFLIAGS----QSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs----~~Di~aA~~aG~~~i~v~ 344 (346)
++.+++ +++++++|||+ .||++|.+.+|...+.|.
T Consensus 192 l~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 192 LQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp GGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred HHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence 455555 89999999996 999999998887666654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.087 Score=47.66 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=36.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc-cchhh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKI 232 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~-~~f~~ 232 (346)
+.|++.+.|+.++++|++++++||............+..+|+. ..++.
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ 79 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADK 79 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGG
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhh
Confidence 4688999999999999999999983223345566777888987 55544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.049 Score=49.12 Aligned_cols=36 Identities=3% Similarity=-0.113 Sum_probs=30.6
Q ss_pred HHHHHHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEec
Q 019086 306 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~ 344 (346)
++.+ +|++++++++||| +.||++|.+.+|+..+.|.
T Consensus 202 l~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~ 241 (262)
T 2fue_A 202 LDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV 241 (262)
T ss_dssp HHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS
T ss_pred HHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec
Confidence 5555 8999999999999 9999999999997666553
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.16 E-value=0.055 Score=48.20 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=29.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc--CCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a--G~~~i~ 342 (346)
|++.+++++| +++|||+.||++|.+.+ |...++
T Consensus 164 al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam 198 (239)
T 1u02_A 164 AIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKV 198 (239)
T ss_dssp HHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEE
T ss_pred HHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEE
Confidence 4888999998 99999999999999999 876654
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=93.09 E-value=0.046 Score=51.63 Aligned_cols=42 Identities=21% Similarity=0.431 Sum_probs=37.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
.+||+.+||+.+.+ ++.|+|.|+ +...++..+++.++....+
T Consensus 165 ~RP~l~eFL~~l~~-~yeivIfTa---s~~~ya~~vld~Ld~~~~~ 206 (320)
T 3shq_A 165 MRPYLHEFLTSAYE-DYDIVIWSA---TSMRWIEEKMRLLGVASND 206 (320)
T ss_dssp BCTTHHHHHHHHHH-HEEEEEECS---SCHHHHHHHHHHTTCTTCS
T ss_pred eCCCHHHHHHHHHh-CCEEEEEcC---CcHHHHHHHHHHhCCCCCc
Confidence 78999999999995 599999999 7789999999999987653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=92.73 E-value=0.056 Score=48.71 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=21.1
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHc
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~ 114 (346)
.+|.|+||+||||++.... ..+...++++++
T Consensus 12 ~~kli~~DlDGTLl~~~~~-is~~~~~al~~l 42 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQK-IDPEVAAFLQKL 42 (262)
T ss_dssp -CEEEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred CeEEEEEeCccCCCCCCCc-CCHHHHHHHHHH
Confidence 5789999999999986653 224445555544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=91.38 E-value=0.037 Score=49.23 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=22.6
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHc
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~ 114 (346)
+|++|+|+||+||||++.... ..+...++++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~l 35 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQK-ITKEMDDFLQKL 35 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcc-cCHHHHHHHHHH
Confidence 567899999999999986543 224445555543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.28 E-value=0.72 Score=41.06 Aligned_cols=48 Identities=27% Similarity=0.421 Sum_probs=32.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (346)
+.|++.++|+.|+++|++++++||............+..+|+....+.
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~ 65 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSI 65 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 347899999999999999999999432222333344445787643333
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=89.71 E-value=0.22 Score=44.26 Aligned_cols=52 Identities=12% Similarity=0.141 Sum_probs=29.3
Q ss_pred eEEEEeccCccccccccccHHHHHHHHHHc--CCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCC
Q 019086 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKL--GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGW 150 (346)
Q Consensus 85 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~--gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~ 150 (346)
..|+||+||||++.... .....++++++ |+. +...+|+.......+.+.+++
T Consensus 4 ~li~~DlDGTLl~~~~~--~~~~~~~l~~~~~gi~------------v~iaTGR~~~~~~~~~~~l~l 57 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQA--LEHLQEYLGDRRGNFY------------LAYATGRSYHSARELQKQVGL 57 (244)
T ss_dssp EEEEECTBTTTBSCHHH--HHHHHHHHHTTGGGEE------------EEEECSSCHHHHHHHHHHHTC
T ss_pred eEEEEeCCCCCcCCHHH--HHHHHHHHHHhcCCCE------------EEEEcCCCHHHHHHHHHHcCC
Confidence 38999999999986532 23344444432 322 334555555544455555443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=89.34 E-value=0.18 Score=44.78 Aligned_cols=14 Identities=36% Similarity=0.534 Sum_probs=12.3
Q ss_pred ceEEEEeccCcccc
Q 019086 84 DLAVLLEVDGVLVD 97 (346)
Q Consensus 84 ~k~viFDlDGTL~d 97 (346)
+|.|+||+||||++
T Consensus 1 ikli~~DlDGTLl~ 14 (239)
T 1u02_A 1 MSLIFLDYDGTLVP 14 (239)
T ss_dssp -CEEEEECBTTTBC
T ss_pred CeEEEEecCCCCcC
Confidence 47899999999997
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=86.43 E-value=2.3 Score=36.84 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=28.2
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
++.+.|..+++.+-++++++.. +.-..++.+.+.+|++
T Consensus 82 Dil~al~~a~~~~~kIavvg~~--~~~~~~~~~~~ll~~~ 119 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYK--HSIVDKHEIEAMLGVK 119 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEES--SCSSCHHHHHHHHTCE
T ss_pred HHHHHHHHHHhhCCcEEEEeCc--chhhHHHHHHHHhCCc
Confidence 5567777888888899999874 3455567777778876
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=84.69 E-value=0.93 Score=39.13 Aligned_cols=16 Identities=25% Similarity=0.291 Sum_probs=14.2
Q ss_pred CceEEEEeccCccccc
Q 019086 83 RDLAVLLEVDGVLVDA 98 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~ 98 (346)
.+++++||+||||++.
T Consensus 30 ~~k~i~~D~DGtl~~~ 45 (218)
T 2o2x_A 30 HLPALFLDRDGTINVD 45 (218)
T ss_dssp SCCCEEECSBTTTBCC
T ss_pred cCCEEEEeCCCCcCCC
Confidence 4789999999999986
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=84.52 E-value=0.2 Score=44.97 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=23.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHH---HHcCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLD 117 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~---~~~gi~ 117 (346)
|.+|+|+||+||||++.... ..+...+++ ++.|+.
T Consensus 2 M~~kli~~DlDGTLl~~~~~-i~~~~~~~l~~l~~~g~~ 39 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLC-QTDEMRALIKRARGAGFC 39 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSC-CCHHHHHHHHHHHHTTCE
T ss_pred CCceEEEEeCcCCcCCCCCc-cCHHHHHHHHHHHHCCCE
Confidence 56899999999999987643 223333333 345665
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=84.02 E-value=1.7 Score=38.38 Aligned_cols=45 Identities=11% Similarity=0.211 Sum_probs=32.9
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchh
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~ 231 (346)
|++.+.|++|+++|++++++||............++.+|+....+
T Consensus 25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~ 69 (266)
T 3pdw_A 25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEE 69 (266)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGG
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHH
Confidence 456789999999999999999933233455667778888864333
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=83.47 E-value=1.4 Score=39.14 Aligned_cols=46 Identities=17% Similarity=0.333 Sum_probs=34.7
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (346)
|++.++|++++++|++++++||........+...++.+|+....+.
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ 69 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLET 69 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGG
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 6888999999999999999997432334556677788888654443
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=81.69 E-value=11 Score=34.21 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+.+++| +.-.-++|||+.---++|+..+|+.+.|.+
T Consensus 220 FerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 220 FERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp HHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 999999998 445677899999999999999999998764
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=80.49 E-value=5.3 Score=35.45 Aligned_cols=38 Identities=13% Similarity=-0.009 Sum_probs=27.1
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
++.+.|..+++.+-++++++.. +.-..+..+.+.+|++
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~--~~~~~~~~i~~ll~~~ 131 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQ--ETIPALVAFQKTFNLR 131 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEES--SCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhhCCcEEEEeCc--hhhhHHHHHHHHhCCc
Confidence 4456666666777899999874 4456677778888876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 346 | ||||
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 1e-05 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 5e-05 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 0.002 |
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 43.6 bits (101), Expect = 1e-05
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 5/110 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLVLF 144
AV+ G VD F + F F K G+ TA + D R + +
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMP 60
Query: 145 FNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVD 194
W +A ++ + +E + L L + A GV++ +
Sbjct: 61 RIASEWNRVFRQLPTEADIQEMYEEFEEILFAILP-RYASPINGVKEVIA 109
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.9 bits (98), Expect = 5e-05
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 170 KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229
K L E +A D L+ G E+F GIP+ + +A + V+ + G
Sbjct: 121 PKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH- 176
Query: 230 SKIKIVGNE 238
S +K+V N
Sbjct: 177 SNVKVVSNF 185
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 36.7 bits (83), Expect = 0.002
Identities = 19/141 (13%), Positives = 35/141 (24%), Gaps = 4/141 (2%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
++DGVL AF + + L L T+ + + F
Sbjct: 2 VAAFDLDGVLALPSIA---GAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFS 58
Query: 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPL-I 204
+ KA N+ + + A + + +G I
Sbjct: 59 QWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCI 118
Query: 205 VLTAYGKSGDRIARSVVEKLG 225
V + GD+
Sbjct: 119 VTNNWLDDGDKRDSLAQMMCE 139
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 346 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.95 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.94 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.93 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.93 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.93 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.92 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.92 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.9 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.9 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.87 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.87 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.87 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.85 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.85 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.84 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.81 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.81 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.77 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.7 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.69 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.68 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.68 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.64 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.61 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.58 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.58 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.57 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.53 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.43 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.37 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.3 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.06 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.79 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.77 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.76 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.7 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.69 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.63 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.51 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.47 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.4 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.4 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.4 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.33 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.32 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.04 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.9 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 97.67 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.5 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.14 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 96.49 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.47 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.94 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.5 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 93.06 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 91.19 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 90.92 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 90.52 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 88.87 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 86.27 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 83.23 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 81.33 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 80.55 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1e-27 Score=211.84 Aligned_cols=188 Identities=18% Similarity=0.230 Sum_probs=137.8
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
+++|||||+||||+|+... +..+|.++++++|++. +.. ..+....+...............+....
T Consensus 2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 67 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI---SRR--NELPDTLGLRIDMVVDLWYARQPWNGPS-------- 67 (218)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCG---GGG--GGSCCCTTCCHHHHHHHHHHHSCCSSSC--------
T ss_pred cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCC---CHH--HHHHHHhCCCccchhhhhhhcccccchh--------
Confidence 5789999999999998886 7789999999999973 221 1122222222333434444444444322
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
...+.+...+.+.+.+ ....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+..+.+.
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~~l~~~F~~i~~~~----- 138 (218)
T d1te2a_ 68 RQEVVERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASA---SPLHMLEKVLTMFDLRDSFDALASAE----- 138 (218)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEECT-----
T ss_pred HHHHHHHHHHHHHHhh-hccccccchHHHHHHHhhhcccccccccc---cccccccccccccccccccccccccc-----
Confidence 1233333333333333 12245789999999999999999999999 77899999999999999887643332
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.+.. .||+|++ |+.+++++|++|++|+|
T Consensus 139 ----------~~~~----------------------------~Kp~~~~--------------~~~~~~~l~~~~~~~l~ 166 (218)
T d1te2a_ 139 ----------KLPY----------------------------SKPHPQV--------------YLDCAAKLGVDPLTCVA 166 (218)
T ss_dssp ----------TSSC----------------------------CTTSTHH--------------HHHHHHHHTSCGGGEEE
T ss_pred ----------cccc----------------------------chhhHHH--------------HHHHHHHcCCCchhcEE
Confidence 2222 2788888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+||.+|+++||.+|+|.+
T Consensus 167 igD~~~di~aA~~~G~~~i~v~~ 189 (218)
T d1te2a_ 167 LEDSVNGMIASKAARMRSIVVPA 189 (218)
T ss_dssp EESSHHHHHHHHHTTCEEEECCC
T ss_pred EeeCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999865
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.94 E-value=5e-27 Score=206.44 Aligned_cols=182 Identities=13% Similarity=0.143 Sum_probs=136.5
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|++|+||||+||||+|+... +..+|.++++++|++ +....+...+. +.... ...+.+... ..
T Consensus 1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~---~~~~~----~~~~~~~~~----~~--- 62 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFP---MAAEQ----AMTELGIAA----SE--- 62 (207)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTT---SCHHH----HHHHTTCCG----GG---
T ss_pred CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhc---chhhh----hhhccccch----hh---
Confidence 67999999999999999886 779999999999997 55554444442 22222 233343321 22
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.+.+...+.+.+.+.. ...+++||+.++|+.|++ +++++|+|| +....++.+++++|+..+|+..+ +.++
T Consensus 63 -~~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~---~~~~~~~~~l~~~~l~~~f~~i~-~~~~-- 132 (207)
T d2hdoa1 63 -FDHFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTS---QRRNELESGMRSYPFMMRMAVTI-SADD-- 132 (207)
T ss_dssp -HHHHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECS---SCHHHHHHHHTTSGGGGGEEEEE-CGGG--
T ss_pred -HHHHHHHhhhhhcccc--cccccccchhhhhhhhcc-ccccccccc---ccccccccccccccccccccccc-cccc--
Confidence 2233333444443333 236789999999999985 699999999 77899999999999999887643 3221
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
+. ..||+|.+ |+.+++++|++|++|+
T Consensus 133 ------------~~----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l 158 (207)
T d2hdoa1 133 ------------TP----------------------------KRKPDPLP--------------LLTALEKVNVAPQNAL 158 (207)
T ss_dssp ------------SS----------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEE
T ss_pred ------------cc----------------------------cchhhhhh--------------hcccccceeeecccee
Confidence 11 12788888 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||||+.+|+.+|+++||.+|++.+
T Consensus 159 ~VgDs~~Di~~a~~aG~~~i~v~~ 182 (207)
T d2hdoa1 159 FIGDSVSDEQTAQAANVDFGLAVW 182 (207)
T ss_dssp EEESSHHHHHHHHHHTCEEEEEGG
T ss_pred EecCCHHHHHHHHHcCCeEEEEec
Confidence 999999999999999999999875
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=3e-26 Score=200.76 Aligned_cols=181 Identities=18% Similarity=0.209 Sum_probs=131.0
Q ss_pred eEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHH
Q 019086 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVK 164 (346)
Q Consensus 85 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 164 (346)
+|+|||+||||+|+... +..+|++++.++|++ ++.+........ .....+...+....+.. .
T Consensus 2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~- 63 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFK--YSVQDLLVRVAEDRNLD-----------V- 63 (204)
T ss_dssp CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHH--SCHHHHHHHHHHHHTCC-----------H-
T ss_pred EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhhcc--cccccccccccchhhhh-----------H-
Confidence 58999999999998876 678999999999998 444443333322 23344444444443322 1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhh
Q 019086 165 NVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (346)
Q Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~ 244 (346)
+........+.... .....++||+.++|+.|+++|++++|+|| +.. .+..+++++|+.++|+..+ +.++.
T Consensus 64 ~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn---~~~-~~~~~l~~~gl~~~f~~i~-~s~~~---- 133 (204)
T d2go7a1 64 EVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTH---KGN-NAFTILKDLGVESYFTEIL-TSQSG---- 133 (204)
T ss_dssp HHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECS---SCT-HHHHHHHHHTCGGGEEEEE-CGGGC----
T ss_pred HHHHHHHHHHHHhh-cccCcccchHHhhhhcccccccchhhhcc---cch-hhhhhhhhccccccccccc-ccccc----
Confidence 11122222222111 23467899999999999999999999999 444 4567899999999988754 32221
Q ss_pred hhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEc
Q 019086 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (346)
Q Consensus 245 f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VG 324 (346)
...||+|++ |+.+++++|++|++|+|||
T Consensus 134 --------------------------------------~~~Kp~~~~--------------~~~~~~~~~~~p~~~l~Vg 161 (204)
T d2go7a1 134 --------------------------------------FVRKPSPEA--------------ATYLLDKYQLNSDNTYYIG 161 (204)
T ss_dssp --------------------------------------CCCTTSSHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred --------------------------------------cccchhHHH--------------HHHHHHHhCCCCceEEEEe
Confidence 122788887 9999999999999999999
Q ss_pred CChhhHHHHHHcCCCEEEecC
Q 019086 325 GSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+|+.+|+++||++|+|.+
T Consensus 162 D~~~Di~~A~~~G~~~i~v~~ 182 (204)
T d2go7a1 162 DRTLDVEFAQNSGIQSINFLE 182 (204)
T ss_dssp SSHHHHHHHHHHTCEEEESSC
T ss_pred CCHHHHHHHHHcCCeEEEEcC
Confidence 999999999999999999865
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.93 E-value=6.1e-26 Score=205.66 Aligned_cols=194 Identities=16% Similarity=0.100 Sum_probs=138.4
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccC-------ChHHHHHHHHHHhCCCCCCC
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-------DEDRMLVLFFNRIGWPTSVP 155 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~g~~~~~~ 155 (346)
++|+||||+||||+|+....+..++.+++.++|++ ++.+.+....+.... ........+...++... .
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 75 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLP--T 75 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCC---CCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCC--C
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCC---CCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccC--C
Confidence 47899999999999987764578999999999987 454443322211000 00011111222232211 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-hhee
Q 019086 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKI 234 (346)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f-~~~i 234 (346)
...++.+.....+.+.+.+ .....++||+.++|+.|+++|++++|+|| ++...++.+++.+|+..+| +. +
T Consensus 76 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn---~~~~~~~~~l~~~~l~~~f~d~-~ 146 (257)
T d1swva_ 76 ----EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKPDF-L 146 (257)
T ss_dssp ----HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCCSC-C
T ss_pred ----HHHHHHHHHHHHHHHHHHh-hccCccCCcHHHHHHHHHhcccceeecCC---CchhhHHHHHHHHhhccccccc-c
Confidence 1224455555666666555 33467999999999999999999999999 7789999999999999876 44 3
Q ss_pred cchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC
Q 019086 235 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 314 (346)
Q Consensus 235 ~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg 314 (346)
++.++. . ..||+|++ |..+++++|
T Consensus 147 ~~~d~~--------------~----------------------------~~KP~p~~--------------~~~~~~~l~ 170 (257)
T d1swva_ 147 VTPDDV--------------P----------------------------AGRPYPWM--------------CYKNAMELG 170 (257)
T ss_dssp BCGGGS--------------S----------------------------CCTTSSHH--------------HHHHHHHHT
T ss_pred cccccc--------------c----------------------------ccccChHH--------------HHHHHHHhC
Confidence 333222 1 12888888 999999999
Q ss_pred CC-CCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 315 KP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 315 v~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+. +++|+||||+.+||.+|+++||.+|+|.++
T Consensus 171 ~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G 203 (257)
T d1swva_ 171 VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 203 (257)
T ss_dssp CCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred CCCcceEEEEeCChhhHHHHHHCCCEEEEEccC
Confidence 95 599999999999999999999999999763
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.93 E-value=6.9e-26 Score=200.31 Aligned_cols=188 Identities=16% Similarity=0.225 Sum_probs=137.3
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|+||+||||+|+... +.++|.+++.++|++. ........+.+ .........+.+..+.. +..+. .
T Consensus 2 ikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~----~ 69 (221)
T d1o08a_ 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VDRQFNEQLKG---VSREDSLQKILDLADKK--VSAEE----F 69 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CCHHHHTTTTT---CCHHHHHHHHHTTSSSC--CCHHH----H
T ss_pred CcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCC--ChHHHHHHHhh---ccchhhhhhcccccccc--chhhh----h
Confidence 689999999999998886 7799999999999983 33333222221 22333333344333222 22222 3
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 164 KNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
..+.....+.|...+.. ...+++||+.++|+.|++.|++++++||. ......++.+|+..+|+..+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~-----~~~~~~l~~~~l~~~f~~i~~~~----- 139 (221)
T d1o08a_ 70 KELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIADPA----- 139 (221)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHTTCGGGCSEECCTT-----
T ss_pred hhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeec-----chhhHHHHhhccccccccccccc-----
Confidence 34455555666655522 24678999999999999999999999993 34678999999999887754332
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.+.. .||+|.+ |+.+++++|++|++|+|
T Consensus 140 ----------~~~~----------------------------~KP~~~~--------------~~~~l~~~~i~~~~~l~ 167 (221)
T d1o08a_ 140 ----------EVAA----------------------------SKPAPDI--------------FIAAAHAVGVAPSESIG 167 (221)
T ss_dssp ----------TSSS----------------------------CTTSTHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ----------cccc----------------------------cccChHH--------------HHHHHHHcCCCCceEEE
Confidence 2221 2788888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+|+.+|+++||.+|+|.+
T Consensus 168 VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 168 LEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp EESSHHHHHHHHHHTCEEEEESC
T ss_pred EecCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999975
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.93 E-value=2.3e-25 Score=196.16 Aligned_cols=192 Identities=14% Similarity=0.141 Sum_probs=136.8
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhC--CCCCCCChhHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIG--WPTSVPTNEKK 160 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~ 160 (346)
++|+|+||+||||+|+... +..++.++++++|.+ ..+...+....+. .............. ....+....
T Consensus 3 ~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-- 74 (224)
T d2hsza1 3 QFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLP--QASENLVMTWIGN---GADVLSQRAVDWACKQAEKELTEDE-- 74 (224)
T ss_dssp SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCC--CCCHHHHHHHCSS---CHHHHHHHHHHHHHHHHTCCCCHHH--
T ss_pred CCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCC--CCcHHHHHHHhhh---hhhhhhhhhhhhhhhhhhhhhhHHH--
Confidence 4799999999999998876 778999999999987 3555554444422 12211111111110 111122111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
...........+.... .....++||+.++|..|+++|++++|+|| +....++.+++.+|+..+|+..+.+.+
T Consensus 75 --~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~L~~L~~~g~~~~i~tn---~~~~~~~~~l~~~gl~~~f~~~~~~~~-- 146 (224)
T d2hsza1 75 --FKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTN---KPTKHVQPILTAFGIDHLFSEMLGGQS-- 146 (224)
T ss_dssp --HHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEEECTTT--
T ss_pred --HHHHHHHHHHHHHHhh-ccccchHHHHHHHHHHHhccCCccccccc---ccHHHHHHHHHhcCchhhccccccccc--
Confidence 1222222222222222 44577999999999999999999999999 678899999999999998887543331
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
+ ...||.|.+ |..+++++|+++++|
T Consensus 147 -------------~----------------------------~~~kp~p~~--------------~~~~~~~~~~~~~~~ 171 (224)
T d2hsza1 147 -------------L----------------------------PEIKPHPAP--------------FYYLCGKFGLYPKQI 171 (224)
T ss_dssp -------------S----------------------------SSCTTSSHH--------------HHHHHHHHTCCGGGE
T ss_pred -------------c----------------------------ccccccchh--------------hHHHHHHhhhhhhcc
Confidence 1 122777777 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+||||+.+|+.+|+++||.+|+|.+
T Consensus 172 ~~igD~~~Di~~A~~aG~~~i~v~~ 196 (224)
T d2hsza1 172 LFVGDSQNDIFAAHSAGCAVVGLTY 196 (224)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEESS
T ss_pred chhcCcHHHHHHHHHcCCeEEEEeC
Confidence 9999999999999999999999975
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=6.7e-25 Score=190.51 Aligned_cols=177 Identities=16% Similarity=0.172 Sum_probs=130.2
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|++|+||||+||||+|+... +..+|.++++++|++ ++...+....+. ..... .+.+... ..
T Consensus 1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~---~~~~~----~~~~~~~--~~------ 61 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKV---STPFA----IETFAPN--LE------ 61 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHH---CHHHH----HHHHCTT--CT------
T ss_pred CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCC---ccHHHHHhhhhc---cchhh----hhhhhHH--HH------
Confidence 78999999999999998875 789999999999997 555555555543 12222 2222211 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
...+.+.+.+.... ....++||+.++|+.|+++|++++|+|| +..... .+++++++..+|+..+ +.+++
T Consensus 62 ---~~~~~~~~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn---~~~~~~-~~l~~~~l~~~fd~i~-~~~~~- 130 (187)
T d2fi1a1 62 ---NFLEKYKENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSH---RNDQVL-EILEKTSIAAYFTEVV-TSSSG- 130 (187)
T ss_dssp ---THHHHHHHHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECS---SCTHHH-HHHHHTTCGGGEEEEE-CGGGC-
T ss_pred ---HHHHHHHHHHHHHh--hcCcccchhHHHHHHHHhhhcccccccc---Cccchh-hhhhhhcccccccccc-ccccc-
Confidence 22233333333333 2467899999999999999999999999 445544 5789999999888643 32221
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
. ..||+|++ |+.+++++++ ++|+
T Consensus 131 -------------~----------------------------~~KP~p~~--------------~~~~~~~~~~--~~~l 153 (187)
T d2fi1a1 131 -------------F----------------------------KRKPNPES--------------MLYLREKYQI--SSGL 153 (187)
T ss_dssp -------------C----------------------------CCTTSCHH--------------HHHHHHHTTC--SSEE
T ss_pred -------------c----------------------------ccCCCHHH--------------HHHHHHHcCC--CCeE
Confidence 1 12888888 9999999986 5699
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||||+..|+.+|+++|+.+|+|++
T Consensus 154 ~vgDs~~Di~aA~~aG~~~i~v~~ 177 (187)
T d2fi1a1 154 VIGDRPIDIEAGQAAGLDTHLFTS 177 (187)
T ss_dssp EEESSHHHHHHHHHTTCEEEECSC
T ss_pred EEeCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999875
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.92 E-value=9.3e-25 Score=193.08 Aligned_cols=185 Identities=18% Similarity=0.223 Sum_probs=138.3
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+||||+||||+|++.. +..+|+++++++|++ ++.+.+...+ .+.....+...+....+.+...
T Consensus 2 ~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~--------- 66 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERF--AGMTWKNILLQVESEASIPLSA--------- 66 (222)
T ss_dssp CSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHH--TTCCHHHHHHHHHHHHCCCCCT---------
T ss_pred ceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHH--hhhccccccccccccccccccc---------
Confidence 689999999999999886 789999999999997 5544433322 2234455666667777654321
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
...+.....+...+ .....+.||+.++|+.|+. +.+++|| +.+..+..+++++|+..+|+..+++.++...
T Consensus 67 -~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~---~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~- 137 (222)
T d2fdra1 67 -SLLDKSEKLLDMRL-ERDVKIIDGVKFALSRLTT---PRCICSN---SSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA- 137 (222)
T ss_dssp -HHHHHHHHHHHHHH-HHHCCBCTTHHHHHHHCCS---CEEEEES---SCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT-
T ss_pred -cchhHHHHHHHHHh-hhccchhhhHHHHhhhccc---cceeeee---cchhhhhhhhcccccccccceeecccccccc-
Confidence 22233333333333 1235689999999988764 5679999 6789999999999999999887665533211
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
...||+|++ |..+++++|++|++|+||
T Consensus 138 ---------------------------------------~~~KP~~~~--------------~~~~~~~l~~~p~~~l~v 164 (222)
T d2fdra1 138 ---------------------------------------DRVKPKPDI--------------FLHGAAQFGVSPDRVVVV 164 (222)
T ss_dssp ---------------------------------------TCCTTSSHH--------------HHHHHHHHTCCGGGEEEE
T ss_pred ---------------------------------------cccccCHHH--------------HHHHHHhhCCCCceEEEE
Confidence 123777777 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||+..|+.+|+++||.+|+|++
T Consensus 165 gDs~~dv~aA~~aG~~~i~v~~ 186 (222)
T d2fdra1 165 EDSVHGIHGARAAGMRVIGFTG 186 (222)
T ss_dssp ESSHHHHHHHHHTTCEEEEECC
T ss_pred cCCHHHHHHHHHcCCEEEEEcc
Confidence 9999999999999999999975
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.90 E-value=1.4e-24 Score=190.28 Aligned_cols=181 Identities=15% Similarity=0.218 Sum_probs=132.4
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
++|+|+||+||||+|+... +..+|+++++++|++ ..+.+.+..+.+ ...... + .+. ++...
T Consensus 3 ~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~~---~~~~~~---~-~~~-----~~~~~---- 63 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVP--SPDAKTIRGFMG---PPLESS---F-ATC-----LSKDQ---- 63 (210)
T ss_dssp TCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCC--CCCHHHHHHTSS---SCHHHH---H-HTT-----SCGGG----
T ss_pred CCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHhhh---cchhhh---c-ccc-----ccchh----
Confidence 4799999999999998875 778999999999987 344444433221 122221 1 111 12222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
+..........+.... .....++||+.++|+.++.++ +++|+|| +....++.+++++|+..+|+..+.+.
T Consensus 64 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~-~~~i~t~---~~~~~~~~~l~~~gl~~~fd~v~~~~----- 133 (210)
T d2ah5a1 64 ISEAVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSSSY-PLYITTT---KDTSTAQDMAKNLEIHHFFDGIYGSS----- 133 (210)
T ss_dssp HHHHHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHTTS-CEEEEEE---EEHHHHHHHHHHTTCGGGCSEEEEEC-----
T ss_pred hHHHHHHHHHHHHhhh-hhcccchhHHHHHHhhhhccc-chhhccc---ccchhhhHHHHhhccccccccccccc-----
Confidence 2333344444444444 335678999999999999875 9999999 78899999999999999887653222
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.. .||.|++ |+.+++++|++|++|+|
T Consensus 134 ----------~~------------------------------~~~~p~~--------------~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 134 ----------PE------------------------------APHKADV--------------IHQALQTHQLAPEQAII 159 (210)
T ss_dssp ----------SS------------------------------CCSHHHH--------------HHHHHHHTTCCGGGEEE
T ss_pred ----------cc------------------------------ccccccc--------------cchhhhhhhccccccee
Confidence 11 1455555 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecCC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
|||+.+|+.+|+++||++|+|.++
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g 183 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWG 183 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSS
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCC
Confidence 999999999999999999999753
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.90 E-value=3.6e-24 Score=190.46 Aligned_cols=191 Identities=14% Similarity=0.168 Sum_probs=129.3
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHc-CCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~-gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
.|.||||+||||+++... +..++.+++.+. |... .... ....+..........+...+++ ..+....
T Consensus 2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 69 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEG---STGS----HDFSGKMDGAIIYEVLSNVGLE----RAEIADK 69 (228)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCC---CC-------CCTTCCHHHHHHHHHHTTTCC----HHHHHHH
T ss_pred ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCc---cHHH----HHHhcCchHHHHHHHHHHhCCC----hHHHHHH
Confidence 578999999999999987 678888877764 4442 1111 0111112222233344444432 1222223
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCC-CCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~G-i~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
++...+.+...+.+.......+++||+.++|+.|+++| ++++|+|| +....+..+++.+|+.++|+..+.+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~---~~~~~~~~~l~~~gl~~~fd~i~~~~~--- 143 (228)
T d2hcfa1 70 FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTG---NFEASGRHKLKLPGIDHYFPFGAFADD--- 143 (228)
T ss_dssp HHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECS---SCHHHHHHHHHTTTCSTTCSCEECTTT---
T ss_pred HHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCC---Ccchhhhhhhhhhcccccccccccccc---
Confidence 33444445555555443445678999999999999997 89999999 778899999999999999887543331
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc---CCCCC
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA---EKPVR 318 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l---gv~p~ 318 (346)
+. .+||.|.+ +...+..+ |++|+
T Consensus 144 ------------~~----------------------------~~k~~p~~--------------~~~~~~~~~~~~~~p~ 169 (228)
T d2hcfa1 144 ------------AL----------------------------DRNELPHI--------------ALERARRMTGANYSPS 169 (228)
T ss_dssp ------------CS----------------------------SGGGHHHH--------------HHHHHHHHHCCCCCGG
T ss_pred ------------cc----------------------------cccchhHH--------------HHHHhhhhcccCCChh
Confidence 11 12566555 44444443 78999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|+||||+.+|+.+|+++||.+|+|.++
T Consensus 170 ~~l~VGD~~~Di~aA~~aG~~~i~v~~g 197 (228)
T d2hcfa1 170 QIVIIGDTEHDIRCARELDARSIAVATG 197 (228)
T ss_dssp GEEEEESSHHHHHHHHTTTCEEEEECCS
T ss_pred HheeecCChHHHHHHHHcCCEEEEEcCC
Confidence 9999999999999999999999998753
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.5e-22 Score=179.40 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=89.8
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
....++||+.++|.+|+++|++++|+|| +........++.+|+.++++......++.
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-------------------- 180 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSS---GSVEAQKLLFGHSTEGDILELVDGHFDTK-------------------- 180 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHTBTTBCCGGGCSEEECGG--------------------
T ss_pred cccccCCCHHHHHHHHhhccCceeecCC---CcHHHHHHHHHHcCcchhhhhcceeeccc--------------------
Confidence 3467899999999999999999999999 77888999999999998887643222111
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
...||+|.+ |+.+++++|++|++|+||||+.+||.+|+++||++
T Consensus 181 ----------------------~~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~t 224 (253)
T d1zs9a1 181 ----------------------IGHKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 224 (253)
T ss_dssp ----------------------GCCTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred ----------------------cccCCCcHH--------------HHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEE
Confidence 112788887 99999999999999999999999999999999999
Q ss_pred EEec
Q 019086 341 VVMR 344 (346)
Q Consensus 341 i~v~ 344 (346)
|+|.
T Consensus 225 i~v~ 228 (253)
T d1zs9a1 225 AVVV 228 (253)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9985
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.87 E-value=6.4e-22 Score=176.17 Aligned_cols=102 Identities=14% Similarity=0.221 Sum_probs=88.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++||+.++|+.|++ |++++++|| +.....+.+++.+|+.++|+..+.+. +.
T Consensus 99 ~~~~p~~~~~L~~l~~-~~~i~i~Sn---~~~~~~~~~l~~~gl~~~fd~i~~s~-~~---------------------- 151 (230)
T d1x42a1 99 GELYPEVVEVLKSLKG-KYHVGMITD---SDTEYLMAHLDALGIKDLFDSITTSE-EA---------------------- 151 (230)
T ss_dssp CCBCTTHHHHHHHHBT-TBEEEEEES---SCHHHHHHHHHHHTCGGGCSEEEEHH-HH----------------------
T ss_pred CcccccHHHHHHHhhc-cCceeeeec---cccccchhhhcccccccccccccccc-cc----------------------
Confidence 5689999999999975 799999999 77889999999999999998765443 21
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
...||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||.+|
T Consensus 152 --------------------~~~KP~~~~--------------~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v 197 (230)
T d1x42a1 152 --------------------GFFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (230)
T ss_dssp --------------------TBCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred --------------------cccchhhHH--------------HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEE
Confidence 123888888 9999999999999999999985 89999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
++..
T Consensus 198 ~v~~ 201 (230)
T d1x42a1 198 LLDR 201 (230)
T ss_dssp EECT
T ss_pred EECC
Confidence 9854
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.87 E-value=2.1e-22 Score=177.01 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=91.1
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++|++.+++..+++.|++++++|| +.....+..+..+++..+|+..+.+.+.+
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn---~~~~~~~~~~~~~~~~~~fd~~~~s~~~~--------------------- 146 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSN---GSPQSIDAVVSHAGLRDGFDHLLSVDPVQ--------------------- 146 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEESGGGT---------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecc---hHHHHHHHHHhhccccccccceeeeeeee---------------------
Confidence 356899999999999999999999999 67888999999999999988865554221
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
..||+|++ |+.+++++|++|++|+||||+..||.+|+++||.+|
T Consensus 147 ----------------------~~KP~p~~--------------~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 147 ----------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred ----------------------ccccHHHH--------------HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence 22888888 999999999999999999999999999999999999
Q ss_pred Eec
Q 019086 342 VMR 344 (346)
Q Consensus 342 ~v~ 344 (346)
+|.
T Consensus 191 ~v~ 193 (220)
T d1zrna_ 191 WIN 193 (220)
T ss_dssp EEC
T ss_pred EEc
Confidence 985
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=4.6e-22 Score=178.33 Aligned_cols=101 Identities=15% Similarity=0.266 Sum_probs=85.8
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++||+.++|+.|+ +|++++|+|| ++....+..++.+|+..+|+..+.+.+ +.
T Consensus 107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~i~~s~~---------------~~------ 161 (247)
T d2gfha1 107 HMILADDVKAMLTELR-KEVRLLLLTN---GDRQTQREKIEACACQSYFDAIVIGGE---------------QK------ 161 (247)
T ss_dssp TCCCCHHHHHHHHHHH-TTSEEEEEEC---SCHHHHHHHHHHHTCGGGCSEEEEGGG---------------SS------
T ss_pred cCccCccHHHHHHHhh-cccceEEeec---ccchhhhhhhhhccccccccccccccc---------------cc------
Confidence 4678999999999998 5799999999 678889999999999999887554431 11
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~ 340 (346)
..||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||.+
T Consensus 162 ----------------------~~KP~p~~--------------~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~ 205 (247)
T d2gfha1 162 ----------------------EEKPAPSI--------------FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKA 205 (247)
T ss_dssp ----------------------SCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSE
T ss_pred ----------------------cchhhhhh--------------HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeE
Confidence 12788887 9999999999999999999996 7999999999996
Q ss_pred EEe
Q 019086 341 VVM 343 (346)
Q Consensus 341 i~v 343 (346)
+++
T Consensus 206 ~~~ 208 (247)
T d2gfha1 206 TVW 208 (247)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.2e-21 Score=169.11 Aligned_cols=106 Identities=10% Similarity=0.041 Sum_probs=85.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|..|+++|++++++||..... ...........++.++|+..+.+. +.
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~-~~--------------------- 155 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC-QV--------------------- 155 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH-HH---------------------
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEecc-cc---------------------
Confidence 4589999999999999999999999953322 233444555677888887754333 21
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
..+||+|.+ |+.+++.+|++|++|+||||+..||.+|+++||++|
T Consensus 156 ---------------------~~~KP~~~~--------------~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti 200 (225)
T d1zd3a1 156 ---------------------GMVKPEPQI--------------YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTI 200 (225)
T ss_dssp ---------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ---------------------ccchhHHHH--------------HHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEE
Confidence 233888888 999999999999999999999999999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
+|.+
T Consensus 201 ~v~~ 204 (225)
T d1zd3a1 201 LVQD 204 (225)
T ss_dssp ECSS
T ss_pred EECC
Confidence 9875
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=2.3e-22 Score=176.69 Aligned_cols=107 Identities=12% Similarity=0.092 Sum_probs=88.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|+.|+++|++++++||...+ ........+..+|+..+|+..+.+. ++
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~-~~--------------------- 153 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESC-QV--------------------- 153 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHH-HH---------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehh-hc---------------------
Confidence 568999999999999999999999984332 2445666778889999998754432 21
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
..+||+|.+ |+.+++++|++|++||||||+..||.+|+++||.+|
T Consensus 154 ---------------------~~~KP~p~~--------------~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti 198 (222)
T d1cr6a1 154 ---------------------GMIKPEPQI--------------YNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTI 198 (222)
T ss_dssp ---------------------SCCTTCHHH--------------HHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEE
T ss_pred ---------------------cCCCCChHH--------------HHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEE
Confidence 223888888 999999999999999999999999999999999999
Q ss_pred EecCC
Q 019086 342 VMRSR 346 (346)
Q Consensus 342 ~v~~~ 346 (346)
+|.++
T Consensus 199 ~V~~~ 203 (222)
T d1cr6a1 199 LVHNT 203 (222)
T ss_dssp ECCSS
T ss_pred EECCc
Confidence 99753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.84 E-value=4.4e-21 Score=170.94 Aligned_cols=101 Identities=12% Similarity=0.141 Sum_probs=87.1
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++|++.+.|..|+ ++.++++|| +....+...+.++|+..+|+..+.+. ++
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~---~~~~~~~~~~~~~~~~~~fd~v~~s~-~~--------------------- 143 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSN---GAPDMLQALVANAGLTDSFDAVISVD-AK--------------------- 143 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEEGG-GG---------------------
T ss_pred ccccchhhhHHHHHHh--hhceeEEec---cchHHHHHHHhhcccccccccccccc-cc---------------------
Confidence 3678999999999885 678999999 67788999999999999888754443 21
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
...||+|++ |+.+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 144 ---------------------~~~KP~p~~--------------f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv 188 (245)
T d1qq5a_ 144 ---------------------RVFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (245)
T ss_dssp ---------------------TCCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ---------------------cccCccHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEE
Confidence 123888888 999999999999999999999999999999999999
Q ss_pred Eec
Q 019086 342 VMR 344 (346)
Q Consensus 342 ~v~ 344 (346)
+|.
T Consensus 189 ~v~ 191 (245)
T d1qq5a_ 189 RVA 191 (245)
T ss_dssp EEC
T ss_pred EEc
Confidence 985
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=6.2e-21 Score=162.75 Aligned_cols=101 Identities=14% Similarity=0.205 Sum_probs=84.5
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++||+.++|+.|+++|++++|+||. +.....+..++.+++..+|......
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~--~~~~~~~~~l~~~~~~~~~~~~~~~------------------------- 96 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRT--SEIQGANQLLELFDLGKYFIQREIY------------------------- 96 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECC--SCHHHHHHHHHHTTCGGGCSEEEES-------------------------
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEecc--ccchhhccchhcccccccceeeecc-------------------------
Confidence 3569999999999999999999999983 2235567788889988776653211
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.||+|.. |..+++++|++|++|+||||+..|+.+|+++||.+|
T Consensus 97 -----------------------~kp~~~~--------------~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i 139 (164)
T d1u7pa_ 97 -----------------------PGSKVTH--------------FERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCI 139 (164)
T ss_dssp -----------------------SSCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred -----------------------cCCChHH--------------HHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence 1566665 999999999999999999999999999999999999
Q ss_pred EecCC
Q 019086 342 VMRSR 346 (346)
Q Consensus 342 ~v~~~ 346 (346)
+|+++
T Consensus 140 ~v~~G 144 (164)
T d1u7pa_ 140 HIRDG 144 (164)
T ss_dssp ECSSC
T ss_pred EECCC
Confidence 99874
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=5.1e-21 Score=162.78 Aligned_cols=103 Identities=14% Similarity=0.209 Sum_probs=82.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh-CcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l-gl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..+.+|+.+++..++.+|++++++||. ........+..+ |+.++|+..+.+.+.
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~---~~~~~~~~~~~~~~l~~~fd~v~~s~~~---------------------- 137 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNT---NRLHTTFWPEEYPEIRDAADHIYLSQDL---------------------- 137 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECC---CCCTTSCCGGGCHHHHHHCSEEEEHHHH----------------------
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCc---cHHHHHHHHHHcccchhhccceeecccc----------------------
Confidence 568899999999999999999999994 334444445543 677777765433211
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+..||+|.+ |+.+++++|++|++|+||||+.+|+++|+++||++|
T Consensus 138 ---------------------~~~Kp~~~~--------------~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti 182 (197)
T d2b0ca1 138 ---------------------GMRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSI 182 (197)
T ss_dssp ---------------------TCCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ---------------------cccccchHH--------------HHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEE
Confidence 223788887 999999999999999999999999999999999999
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
+|..
T Consensus 183 ~v~~ 186 (197)
T d2b0ca1 183 LVKD 186 (197)
T ss_dssp ECCS
T ss_pred EECC
Confidence 9875
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=1.7e-18 Score=151.30 Aligned_cols=45 Identities=7% Similarity=0.069 Sum_probs=43.3
Q ss_pred ccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 286 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 286 KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
||+|.+ |+.+++++|++|++|+||||+.+||.+|+++||++|+|.
T Consensus 159 KP~p~~--------------f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~ 203 (225)
T d2g80a1 159 KTETQS--------------YANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLAS 203 (225)
T ss_dssp TTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEEC
T ss_pred CCChhH--------------hHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEe
Confidence 888888 999999999999999999999999999999999999985
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.70 E-value=2.6e-17 Score=145.16 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=77.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh-eecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~-~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|+.|+++|++++++|| +....++.+++++|+..++.. .... .+.......+..
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~---~~~~~i~~~l~~l~~~~~~~an~~~~-------------~~~~~~~~~~~~ 137 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLEGIVEKDRIYCNHASF-------------DNDYIHIDWPHS 137 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHTTTSCGGGEEEEEEEC-------------SSSBCEEECTTC
T ss_pred cchhHHHHHHHHHHHhcccccccCCc---chhhhHHHHHHHcCCccceeeeeEEE-------------eCCcceeccccc
Confidence 56899999999999999999999999 788999999999998765421 1111 111111000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
......||.+.. ...+++.+++++++|++|||+.+|+.||++||+..
T Consensus 138 ------------------~~~~~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 138 ------------------CKGTCSNQCGCC--------------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp ------------------CCTTCCSCCSSC--------------HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred ------------------cccccccCCHHH--------------HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence 000001233333 78889999999999999999999999999999754
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.4e-17 Score=147.84 Aligned_cols=113 Identities=12% Similarity=0.187 Sum_probs=74.5
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh-hHHHhhhhccccccccccCcc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~-e~~~~~f~~i~~g~~v~~~~~ 259 (346)
....++||+.++|++|+++|++++|+|+ +.+..++.+++.+|++... +++.+ +. ..++.++|..
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~---~~~~~v~~i~~~lgi~~~~---v~an~~~~---~~~G~~~g~~------ 143 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATN---VFANRLKF---YFNGEYAGFD------ 143 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGG---EEEECEEE---CTTSCEEEEC------
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECC---CchHHHHHHHHHhCCcccc---eeeeeeee---eehhccccce------
Confidence 4567899999999999999999999999 8899999999999997431 11110 00 0011111110
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
++.|.. ....+..+ .+...+. .++++|++|||+.+|+.|++.||+.
T Consensus 144 --------------------------~~~p~~---~~~~K~~~---v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~ 189 (217)
T d1nnla_ 144 --------------------------ETQPTA---ESGGKGKV---IKLLKEK--FHFKKIIMIGDGATDMEACPPADAF 189 (217)
T ss_dssp --------------------------TTSGGG---STTHHHHH---HHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEE
T ss_pred --------------------------eeeeee---ccchHHHH---HHHHHhc--cCccccEEEEeCHhhHHHHHhCCce
Confidence 111111 11111222 4444443 4578999999999999999999987
Q ss_pred EEE
Q 019086 340 CVV 342 (346)
Q Consensus 340 ~i~ 342 (346)
+++
T Consensus 190 va~ 192 (217)
T d1nnla_ 190 IGF 192 (217)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.68 E-value=2e-17 Score=146.85 Aligned_cols=48 Identities=10% Similarity=0.179 Sum_probs=44.6
Q ss_pred hhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 284 ~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
.+||+|.+ +..+++++++++++|+||||+.+||++|++|||.+++|.+
T Consensus 127 ~rKP~p~m--------------l~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~ 174 (209)
T d2o2xa1 127 MRKPNPGM--------------LVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVD 174 (209)
T ss_dssp TSTTSCHH--------------HHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEET
T ss_pred cccccchh--------------hhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeC
Confidence 35888888 9999999999999999999999999999999999998865
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=1.7e-17 Score=141.48 Aligned_cols=109 Identities=12% Similarity=0.147 Sum_probs=72.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCC---C--ch-------hHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGK---S--GD-------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~---~--~~-------~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
+.++||+.++|+.|+++|++++++||.+. + .. ......+...|+.. +... |...+.
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~i~----------~~~~~~ 96 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF--DEVL----------ICPHLP 96 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCE--EEEE----------EECCCG
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccccccc--ceee----------eccccc
Confidence 45899999999999999999999999420 0 00 11223333444321 0000 000011
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
.... ..+||+|++ ++.+++++|++|++|+||||+..|+
T Consensus 97 ~~~~----------------------------~~~KP~p~~--------------~~~~~~~~~id~~~~~~IGD~~~Di 134 (161)
T d2fpwa1 97 ADEC----------------------------DCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 134 (161)
T ss_dssp GGCC----------------------------SSSTTSSGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred cccc----------------------------cccccccHH--------------HHHHHHhcCCChhcEEEECCCHHHH
Confidence 1111 224899888 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEecC
Q 019086 331 AGAQRIGMPCVVMRS 345 (346)
Q Consensus 331 ~aA~~aG~~~i~v~~ 345 (346)
++|++|||.+|++..
T Consensus 135 ~aA~~aG~~~i~i~~ 149 (161)
T d2fpwa1 135 QLAENMGINGLRYDR 149 (161)
T ss_dssp HHHHHHTSEEEECBT
T ss_pred HHHHHcCCeEEEECC
Confidence 999999999999864
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=6.4e-16 Score=139.42 Aligned_cols=41 Identities=10% Similarity=0.243 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|++|++|+||||+. +||.+|+++||.+|+|+++
T Consensus 182 ~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G 223 (250)
T d2c4na1 182 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 223 (250)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred HhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCC
Confidence 9999999999999999999997 5999999999999999764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.61 E-value=1.7e-15 Score=136.84 Aligned_cols=41 Identities=0% Similarity=0.115 Sum_probs=38.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~-Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|++|++|+||||+.. ||.+|+++||.+|+|+++
T Consensus 186 ~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G 227 (253)
T d1wvia_ 186 MNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTG 227 (253)
T ss_dssp HHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSS
T ss_pred ceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCC
Confidence 99999999999999999999974 999999999999999764
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.58 E-value=2.1e-15 Score=129.62 Aligned_cols=110 Identities=13% Similarity=0.139 Sum_probs=80.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..+.+|+.++++.++.+|..++++|+ +....+.......+...++...+...+.. ..
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------------- 130 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDGK------LT-------------- 130 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTE------EE--------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecc---cccccccchhhccchhhhhhhhhcccccc------cc--------------
Confidence 56899999999999999999999999 67888889999988887665432221100 00
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
...+.. .+...+.+.. +...++.+++.++++++|||+.||+.|++.||+..++
T Consensus 131 -----------------------~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~ 183 (210)
T d1j97a_ 131 -----------------------GDVEGE-VLKENAKGEI---LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 183 (210)
T ss_dssp -----------------------EEEECS-SCSTTHHHHH---HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE
T ss_pred -----------------------cccccc-ccccccccch---hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE
Confidence 000000 1112223333 7888999999999999999999999999999997665
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.58 E-value=1.2e-14 Score=131.19 Aligned_cols=41 Identities=10% Similarity=0.139 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
++.+++++|++|++|+||||+. +||.+|+++||.+|+|+++
T Consensus 191 ~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G 232 (261)
T d1vjra_ 191 VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTG 232 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSS
T ss_pred HHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCC
Confidence 9999999999999999999996 6999999999999999764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=4.5e-15 Score=128.06 Aligned_cols=48 Identities=13% Similarity=0.235 Sum_probs=42.6
Q ss_pred hhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE-EEecC
Q 019086 284 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC-VVMRS 345 (346)
Q Consensus 284 ~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~-i~v~~ 345 (346)
.+||+|++ +..+++++++++++++||||+..|+++|++||+.+ ++|.+
T Consensus 106 ~rKP~p~m--------------~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~ 154 (182)
T d2gmwa1 106 CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRT 154 (182)
T ss_dssp SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESS
T ss_pred ccCCcccc--------------ccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECC
Confidence 35888887 99999999999999999999999999999999986 55554
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.53 E-value=1.2e-14 Score=130.81 Aligned_cols=41 Identities=5% Similarity=0.156 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|++|++|+||||+. +||.||++|||++|+|.++
T Consensus 186 ~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G 227 (253)
T d1yv9a1 186 MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSG 227 (253)
T ss_dssp HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred HHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCC
Confidence 9999999999999999999997 5999999999999999764
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.43 E-value=7.2e-14 Score=115.41 Aligned_cols=41 Identities=20% Similarity=0.068 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCCCc-EEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRN-CFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e-~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
....+..+..+..+ +++|||+..||+||+++|++|+.|.++
T Consensus 106 k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 106 KEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 45556666666555 567899999999999999999999875
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.37 E-value=5.3e-13 Score=127.90 Aligned_cols=113 Identities=16% Similarity=0.075 Sum_probs=85.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhe-ecchhhHHHhhhhccccccccccCcchhHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~-i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
++||+.++|+.|+++|++++++|| .+...++.+++.+|+.++|+.. +++.+++..... ......
T Consensus 216 p~~~v~~~l~~lk~aGi~v~i~Tg---~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~---~~~~~~--------- 280 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASDVLEAEN---MYPQAR--------- 280 (380)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHH---HSTTSC---------
T ss_pred chhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcccCCcceEEecchhhhhhh---hccccc---------
Confidence 566999999999999999999999 7789999999999999998654 444444322100 000000
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHH--------------cCCCCCcEEEEcCChhh
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY--------------AEKPVRNCFLIAGSQSG 329 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~--------------lgv~p~e~i~VGDs~~D 329 (346)
...||+|++ |..++.. +++.+++|+||||+.+|
T Consensus 281 -------------------~~~KP~p~~--------------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D 327 (380)
T d1qyia_ 281 -------------------PLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLAD 327 (380)
T ss_dssp -------------------CCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHH
T ss_pred -------------------cccCCChHH--------------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHH
Confidence 122666665 6666543 56778999999999999
Q ss_pred HHHHHHcCCCEEEecC
Q 019086 330 VAGAQRIGMPCVVMRS 345 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~ 345 (346)
+.||++||+++|+|.+
T Consensus 328 ~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 328 LLSAQKIGATFIGTLT 343 (380)
T ss_dssp HHHHHHHTCEEEEESC
T ss_pred HHHHHHCCCCEEEEec
Confidence 9999999999999864
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.30 E-value=5.1e-12 Score=107.73 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=73.9
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.....++...++..++ ++.+++++|. +...........++....+.......... ......
T Consensus 67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~-------- 127 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLR-ERFQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------RVVGYQ-------- 127 (206)
T ss_dssp TCCCCTTHHHHHHHHH-TTSEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTS-------CEEEEE--------
T ss_pred hccccchHHHHHHHhh-cCceEEEecc---CchHHHHHHHHHhCCchhhcceeeeeccc-------cccccc--------
Confidence 4678899999988765 6789999998 77888889999888876543321111000 000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
. +.+. ..+..++.+|++++++++|||+.||++|.+.||+..+
T Consensus 128 ------------------------~-------~~~~-------~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIA 169 (206)
T d1rkua_ 128 ------------------------L-------RQKD-------PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGIL 169 (206)
T ss_dssp ------------------------C-------CSSS-------HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEE
T ss_pred ------------------------c-------cchh-------hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEE
Confidence 0 1111 1566788999999999999999999999999999877
Q ss_pred E
Q 019086 342 V 342 (346)
Q Consensus 342 ~ 342 (346)
+
T Consensus 170 m 170 (206)
T d1rkua_ 170 F 170 (206)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.06 E-value=4.3e-10 Score=97.27 Aligned_cols=46 Identities=7% Similarity=0.087 Sum_probs=38.5
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 294 p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|...+++.. ++.+++++|++++++++|||+.||+.|++.+|+..++
T Consensus 148 ~~~~~K~~a---l~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav 193 (230)
T d1wr8a_ 148 KPWINKGSG---IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV 193 (230)
T ss_dssp CTTCCHHHH---HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred eCCcCcchh---hcccccccccchhheeeeecCccHHHHHHHCCeEEEE
Confidence 334445554 8999999999999999999999999999999986543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.79 E-value=3.7e-09 Score=97.29 Aligned_cols=45 Identities=24% Similarity=0.481 Sum_probs=41.6
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
..+.++||+.++++.|+++|++++|+|+ |....++.+++++|+..
T Consensus 132 ~~i~Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 132 SDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 176 (291)
T ss_dssp SCCCBCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHHTTCCB
T ss_pred cCCCcccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHcCCCc
Confidence 3578999999999999999999999999 89999999999999863
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.77 E-value=1.1e-08 Score=91.01 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.++++++++++|||+.||+.|.+.+|...++
T Consensus 201 al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am 238 (271)
T d1rkqa_ 201 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 238 (271)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe
Confidence 58999999999999999999999999999999976643
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.76 E-value=4.8e-09 Score=91.41 Aligned_cols=38 Identities=13% Similarity=-0.033 Sum_probs=34.6
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||+.|++.+|+..++
T Consensus 155 ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav 192 (225)
T d1l6ra_ 155 AVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP 192 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC
T ss_pred HHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE
Confidence 48899999999999999999999999999999986543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=1.9e-08 Score=87.73 Aligned_cols=97 Identities=8% Similarity=0.108 Sum_probs=64.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHH-HHhCcccchhh-eecchhhHHHhhhhccccccccccCcch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV-EKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l-~~lgl~~~f~~-~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
..+.||+.+|++.++++|++|..+||........+..-+ +.+|+....+. .++.. .
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~--------------~-------- 142 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAG--------------D-------- 142 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECC--------------C--------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeC--------------C--------
Confidence 347789999999999999999999996544444444444 44777422111 01111 0
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
+ |++.. -+..+++.++ .+++||..+|+.+|+.+|+++
T Consensus 143 -------------------------~-------~~K~~-------rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~ 179 (209)
T d2b82a1 143 -------------------------K-------PGQNT-------KSQWLQDKNI----RIFYGDSDNDITAARDVGARG 179 (209)
T ss_dssp -------------------------C-------TTCCC-------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred -------------------------C-------CCchH-------HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCc
Confidence 0 11110 1223366666 899999999999999999999
Q ss_pred EEec
Q 019086 341 VVMR 344 (346)
Q Consensus 341 i~v~ 344 (346)
|.|.
T Consensus 180 iRi~ 183 (209)
T d2b82a1 180 IRIL 183 (209)
T ss_dssp EECC
T ss_pred eEee
Confidence 9874
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=1e-07 Score=84.96 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 217 ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam 254 (285)
T d1nrwa_ 217 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM 254 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe
Confidence 48999999999999999999999999999999977654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=1.2e-07 Score=81.18 Aligned_cols=47 Identities=6% Similarity=0.035 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 298 SLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 298 ~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
.+...+.++...++.+|++++++++|||+.||+.|.+.+|. .|.|++
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n 230 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG 230 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence 34555445555556789999999999999999999999997 555543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=1.8e-08 Score=89.65 Aligned_cols=38 Identities=8% Similarity=-0.020 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||+.|.+.+|...++
T Consensus 194 al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam 231 (269)
T d1rlma_ 194 GISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM 231 (269)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC
T ss_pred HHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe
Confidence 48999999999999999999999999999999988764
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.47 E-value=3e-07 Score=81.71 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 194 ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~ 231 (267)
T d1nf2a_ 194 ALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM 231 (267)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe
Confidence 48999999999999999999999999999999987543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.40 E-value=1.2e-07 Score=83.01 Aligned_cols=38 Identities=8% Similarity=-0.031 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||+.|.+.+|..+++
T Consensus 166 a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 166 ATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred HHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 48999999999999999999999999999999976553
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.40 E-value=4.6e-07 Score=80.17 Aligned_cols=38 Identities=5% Similarity=0.050 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.++++++++++|||+.||+.|.+.+|..+++
T Consensus 211 ~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~ 248 (283)
T d2b30a1 211 GINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV 248 (283)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC
T ss_pred HHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe
Confidence 48999999999999999999999999999999986553
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.40 E-value=1.9e-07 Score=82.79 Aligned_cols=37 Identities=0% Similarity=-0.029 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
|++..++++|++++++++|||+.||+.|.+.+|..++
T Consensus 190 al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sva 226 (260)
T d2rbka1 190 GIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVA 226 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEE
Confidence 4899999999999999999999999999999999654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.33 E-value=2.6e-07 Score=79.91 Aligned_cols=38 Identities=8% Similarity=0.062 Sum_probs=33.2
Q ss_pred HHHHHHHHcC-CCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAE-KPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lg-v~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++..++.++ +.++++++|||+.||++|.+.+|...++
T Consensus 183 al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~ 221 (243)
T d1wzca1 183 AAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (243)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred HHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe
Confidence 3778888884 8899999999999999999999977654
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.32 E-value=4.3e-07 Score=78.41 Aligned_cols=98 Identities=20% Similarity=0.236 Sum_probs=67.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCC-----CCch----hHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYG-----KSGD----RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~-----~~~~----~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~ 255 (346)
++|++.+.|..|.++|+.++|+||+. .-.. .....+++.++.... ++.+ ..
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~~----i~~~-------------~~--- 110 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQ----VLVA-------------TH--- 110 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCCE----EEEE-------------CS---
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCcc----EEEe-------------cC---
Confidence 57999999999999999999999941 0000 223334444443211 0000 00
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCCh----
Q 019086 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 327 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg----v~p~e~i~VGDs~---- 327 (346)
.+ ..|||.|++ ++.+++... ++.++++||||..
T Consensus 111 ~~-------------------------~~RKP~~GM--------------~~~~~~~~n~~~~id~~~S~~IGD~~gr~~ 151 (195)
T d1yj5a1 111 AG-------------------------LNRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 151 (195)
T ss_dssp SS-------------------------SSSTTSTHH--------------HHHHHHTSSSSCCCCGGGCEEECSCCCBCT
T ss_pred cc-------------------------ccCCCccHH--------------HHHHHHHhcccccCCcCceEEEeCccCccc
Confidence 00 246999998 999998864 8889999999954
Q ss_pred -------------hhHHHHHHcCCCEE
Q 019086 328 -------------SGVAGAQRIGMPCV 341 (346)
Q Consensus 328 -------------~Di~aA~~aG~~~i 341 (346)
.|++.|+++|+...
T Consensus 152 ~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 152 NWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred cccccccccCcchhHHHHHHHCCCccc
Confidence 89999999999854
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.04 E-value=8.7e-06 Score=65.83 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=39.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++|++.+.|+.|++.|++++++|+ .....+..+.+.+|++..+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTG---D~~~~a~~ia~~lgI~~v~ 64 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVI 64 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcC---cchhhhhHHHhhhhhhhhc
Confidence 4899999999999999999999998 7788899999999998644
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.90 E-value=7.9e-06 Score=69.07 Aligned_cols=82 Identities=16% Similarity=0.092 Sum_probs=64.6
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|..|+..|+.++++|. .....+......+++...+...
T Consensus 40 gi~~l~~~gi~~~iis~---~~~~~v~~~~~~l~~~~~~~~~-------------------------------------- 78 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSG---RDSPILRRRIADLGIKLFFLGK-------------------------------------- 78 (177)
T ss_dssp HHHHHHHTTCEEEEEES---CCCHHHHHHHHHHTCCEEEESC--------------------------------------
T ss_pred HHHHHhhhcEEEEEecC---CchhHHHHHHhhhccccccccc--------------------------------------
Confidence 36678899999999999 5568888888888887543210
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.+.. .+++..++++|+++++|++|||..||+++.+.+|+..+.
T Consensus 79 -------------------------~~K~---~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap 121 (177)
T d1k1ea_ 79 -------------------------LEKE---TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 121 (177)
T ss_dssp -------------------------SCHH---HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred -------------------------ccHH---HHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc
Confidence 0000 127888999999999999999999999999999987654
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.67 E-value=0.00017 Score=60.77 Aligned_cols=29 Identities=14% Similarity=0.083 Sum_probs=24.0
Q ss_pred CCCCCCcHHHHHHHHHhCCC-CEEEEcCCC
Q 019086 182 DAPLRPGVEDFVDDAYNEGI-PLIVLTAYG 210 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi-~v~ilTn~~ 210 (346)
.+++.||+.+++..|++.|. .+.++|...
T Consensus 72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~ 101 (195)
T d1q92a_ 72 ELEPLPGAVEAVKEMASLQNTDVFICTSPI 101 (195)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred hCCcccCHHHHHHHHhhccCccceEEcccc
Confidence 47899999999999998654 678888843
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.50 E-value=0.00016 Score=60.24 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=38.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|+.|++.|+++.++|+ .....+..+...+|+.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTG---D~~~tA~~ia~~~Gi~ 60 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIF 60 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTSS
T ss_pred CCchhHHHHHHHHHHCcCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 5889999999999999999999999 7788899999999985
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.14 E-value=0.00023 Score=68.10 Aligned_cols=127 Identities=9% Similarity=0.017 Sum_probs=81.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-h--------CcccchhheecchhhHHHhhhhccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-l--------gl~~~f~~~i~~~~e~~~~~f~~i~~g~~ 253 (346)
+...|.+..+|..||++|.++-++|| ++-.++..+++. + .+.++||++|+..... ++|+.-..-..
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTN---S~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP--~FF~~~~~~~~ 258 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTN---SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKP--RFFYDNLRFLS 258 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECS---SCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHH--HHHHSCCCEEE
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEec---CcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCC--CccCCCCcceE
Confidence 33578999999999999999999999 556777777775 4 4568999988776433 34542100000
Q ss_pred c--ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhH
Q 019086 254 I--SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGV 330 (346)
Q Consensus 254 v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di 330 (346)
| .+|.-.. +....||. ++.. .. .....+.+|....++++|||+. .||
T Consensus 259 v~~~~g~l~~-------------------~~~~~~~~--vY~g-Gn--------~~~l~~llg~~g~~VLY~GDhi~~Di 308 (458)
T d2bdea1 259 VNPENGTMTN-------------------VHGPIVPG--VYQG-GN--------AKKFTEDLGVGGDEILYIGDHIYGDI 308 (458)
T ss_dssp ECTTTCCEEE-------------------CCSCCCSE--EEEE-CC--------HHHHHHHTTCCGGGEEEEESSCCSCH
T ss_pred EeCCCCcccc-------------------CCccccCC--cccc-CC--------HHHHHHHhCCCCCcEEEECCccchhh
Confidence 1 0110000 00000111 1100 11 5677888999999999999998 797
Q ss_pred HHHH-HcCCCEEEec
Q 019086 331 AGAQ-RIGMPCVVMR 344 (346)
Q Consensus 331 ~aA~-~aG~~~i~v~ 344 (346)
...+ ..||+|+.|-
T Consensus 309 ~~~kk~~gWrT~~Ii 323 (458)
T d2bdea1 309 LRLKKDCNWRTALVV 323 (458)
T ss_dssp HHHHHHHCSEEEEEC
T ss_pred hhhhhhcCCceEEeh
Confidence 7775 6899999873
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=96.49 E-value=0.0023 Score=50.36 Aligned_cols=44 Identities=16% Similarity=0.080 Sum_probs=33.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCC------------chhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~------------~~~~~~~~l~~lgl~ 227 (346)
.|.+++.+.|..|++.|++|.|.|+.+-. ........|++.|+.
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~ 79 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP 79 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence 37889999999999999999999995211 123466677777874
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.47 E-value=0.0036 Score=52.37 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=26.5
Q ss_pred cCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEecC
Q 019086 313 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 313 lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~~ 345 (346)
++.+++++++||| +.||++|.+.+|...+.|.+
T Consensus 194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 4678999999999 67999999999976666643
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.94 E-value=0.019 Score=47.45 Aligned_cols=48 Identities=21% Similarity=0.264 Sum_probs=41.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
...+||+.+||+.+.+. +.|+|.|. +...++..+++.+.....+....
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta---~~~~YA~~il~~ldp~~~~~~~~ 101 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTA---SLAKYADPVADLLDKWGAFRARL 101 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCSSCCEEEEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcC---CcHHHHHHHHHHhccCCceeEEE
Confidence 34799999999999876 99999999 78999999999999876655443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.50 E-value=0.15 Score=44.13 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=36.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.+-||+.++|..+.+. .+..|+|. +.+.+++.+..++|+.
T Consensus 80 ~~lvpgA~~~lk~l~~~-m~~yIvST---SY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 80 AKFVPDAEKAMATLQER-WTPVVIST---SYTQYLRRTASMIGVR 120 (308)
T ss_dssp CCBCTTHHHHHHHHHTT-CEEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred eeecCCHHHHHHHHHhh-CCcEEEec---cHHHHHHHHHhhcCCC
Confidence 67999999999998877 78888888 7789999999999985
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.06 E-value=0.022 Score=47.10 Aligned_cols=37 Identities=5% Similarity=-0.083 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh----hhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ----SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~----~Di~aA~~aG~~~i~v~~ 345 (346)
++.++ +.+++++++|||+. ||++|.+.+|...+.|.+
T Consensus 190 l~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 190 LDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp HHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred HHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 55554 45889999999974 999999999976665543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.19 E-value=0.052 Score=44.61 Aligned_cols=28 Identities=32% Similarity=0.364 Sum_probs=17.7
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHc
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~ 114 (346)
.++|||||||++.... ..+...++++++
T Consensus 3 i~lFDlDGTLl~~~~~-is~~~~~~i~~l 30 (244)
T d2fuea1 3 LCLFDVDGTLTPARQK-IDPEVAAFLQKL 30 (244)
T ss_dssp EEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred EEEEccccCccCCCCc-CCHHHHHHHHHH
Confidence 4558999999986643 224445555543
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=90.92 E-value=0.053 Score=44.46 Aligned_cols=24 Identities=8% Similarity=0.014 Sum_probs=21.2
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCE
Q 019086 317 VRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 317 p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
.+++++|||+.||+.|.+.+|...
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~~ 193 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDAL 193 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTSE
T ss_pred cccceeecCCCChHHHHhccCCeE
Confidence 378999999999999999998753
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.52 E-value=0.041 Score=45.42 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=21.0
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHc
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~ 114 (346)
.+|.++||+||||++.... ..+...++++++
T Consensus 2 ~~kl~~fDlDGTLl~~~~~-i~~~~~~al~~l 32 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQK-ITKEMDDFLQKL 32 (243)
T ss_dssp CSEEEEEESBTTTBCTTSC-CCHHHHHHHHHH
T ss_pred CCEEEEEcCcCCeeCCCCc-CCHHHHHHHHHH
Confidence 4689999999999986543 224445555544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.87 E-value=0.17 Score=41.08 Aligned_cols=12 Identities=42% Similarity=0.764 Sum_probs=11.0
Q ss_pred EEEEeccCcccc
Q 019086 86 AVLLEVDGVLVD 97 (346)
Q Consensus 86 ~viFDlDGTL~d 97 (346)
.|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 689999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=86.27 E-value=0.25 Score=37.89 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=31.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
|.|++.++|+.|+++|++|++.|+.+..........+.+.|+.
T Consensus 22 Pi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 22 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 7899999999999999999999994321223344455555554
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=83.23 E-value=0.2 Score=40.89 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=14.7
Q ss_pred CceEEEEeccCcccccc
Q 019086 83 RDLAVLLEVDGVLVDAY 99 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~ 99 (346)
.+|.+|||+||||+|..
T Consensus 4 ~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GCCEEEEECTTTTSCSE
T ss_pred cCeEEEEccCCcccCCe
Confidence 57899999999999843
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=81.33 E-value=1.8 Score=35.35 Aligned_cols=38 Identities=13% Similarity=-0.009 Sum_probs=27.9
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
++.+.|..+++.+-++++++.. +....++.+.+.+|++
T Consensus 82 Dil~al~~a~~~~~kiavV~~~--~~~~~~~~~~~ll~~~ 119 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQ--ETIPALVAFQKTFNLR 119 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEES--SCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCEEEEeCC--ccchHHHHHHHHhCCc
Confidence 4556666677778899999874 3456677888888886
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=80.55 E-value=0.25 Score=45.05 Aligned_cols=18 Identities=33% Similarity=0.554 Sum_probs=15.6
Q ss_pred ceEEEEeccCcccccccc
Q 019086 84 DLAVLLEVDGVLVDAYRF 101 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~ 101 (346)
+|.|+|||||||++.+..
T Consensus 1 ~~~i~fd~dGVll~~~~~ 18 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERC 18 (380)
T ss_dssp CCEEEECSBTTTBCSHHH
T ss_pred CceEEEeCCcEEEcceee
Confidence 578999999999997764
|