Citrus Sinensis ID: 019114

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
MDTIKALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIYC
cccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHccccccccccccccHHHHHHHHHHHHHHHHccHHHHcccEEEEEcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccc
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHcEEEEEcccccHHcHHcccccHccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcHHHcccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHccccEEEc
MDTIKALLFSFFHLLFFLSGQQQQVlghrqlygfrptkifvfgdsyvdtgnipksvlgswkepygltfpgkpagrfsdgrVLTDYLARFVGIKSPIAYRWRKIALKNLKygmnfafggtgvfdtlvanpnmttQIDFFQQVIKEAvyspadlkSSLALVSAAGNDYSTYVAvngsaegfqPFITKVVNQLTLNMkrihglgvrkilvpslpplgclpqstsklsfqqcnetenslSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTfknkgssktenplmpccvgigkdsscgsvddngvkLYTVcakpeasffwdgvhpsqegWQSVYSALKpklqqiyc
MDTIKALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARfvgikspiayRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNkgssktenplMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKpklqqiyc
MDTIKAllfsffhllfflsGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIYC
***IKALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQS***LSFQQCN*TENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKN********PLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSAL*********
*****ALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAV**PADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIYC
MDTIKALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIYC
*DTIKALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIYC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDTIKALLFSFFHLLFFLSGQQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIYC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query346 2.2.26 [Sep-21-2011]
Q9LZS7359 GDSL esterase/lipase At5g yes no 0.985 0.949 0.599 1e-118
Q9SF94354 GDSL esterase/lipase At3g no no 0.942 0.920 0.555 1e-104
Q8RWJ4356 GDSL esterase/lipase At2g no no 0.913 0.887 0.480 2e-80
Q9LZS8322 GDSL esterase/lipase At5g no no 0.872 0.937 0.451 1e-71
Q9LZS9344 GDSL esterase/lipase At5g no no 0.861 0.866 0.453 4e-70
Q3MKY2387 Acetylajmalan esterase OS N/A no 0.838 0.749 0.291 1e-28
Q9SJB4350 GDSL esterase/lipase At2g no no 0.910 0.9 0.303 3e-26
Q7XA74417 GDSL esterase/lipase At1g no no 0.797 0.661 0.277 6e-26
P40602534 Anther-specific proline-r no no 0.849 0.550 0.292 2e-25
Q9LMJ3360 GDSL esterase/lipase At1g no no 0.852 0.819 0.271 4e-25
>sp|Q9LZS7|GDL71_ARATH GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1 Back     alignment and function desciption
 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/352 (59%), Positives = 258/352 (73%), Gaps = 11/352 (3%)

Query: 1   MDTIKALLFSFFHLLF--FLSGQQQQVLGHRQ---LYGFRPTKIFVFGDSYVDTGNIPKS 55
           MD++  L F  F  L    L G+   V G  Q   LY FRPTK+FVFGDSY DTGNI K+
Sbjct: 1   MDSLIKLFFCLFIFLCTSLLFGEINGVEGSNQNHHLYPFRPTKLFVFGDSYADTGNIKKA 60

Query: 56  VLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIA-LKNLKYGMNF 114
              SWK PYG+TFPGKPAGRFSDGRV TD+LA+FVGIKSPI Y W+  A  K L+YGMNF
Sbjct: 61  FSSSWKFPYGITFPGKPAGRFSDGRVATDFLAKFVGIKSPIPYFWKDYAGKKRLQYGMNF 120

Query: 115 AFGGTGVFDTLVANPNMTTQIDFFQQVIKEA-VYSPADLKSSLALVSAAGNDYSTYVAVN 173
           A+GGTGVF+T    PNMTTQID FQ ++    +Y P +L SS+ALVS AGNDYS ++A+N
Sbjct: 121 AYGGTGVFNTQTPLPNMTTQIDIFQNILTTGDIYYPPELTSSVALVSVAGNDYSNFIALN 180

Query: 174 GSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETEN 233
             A  F  FI +VV+Q  +N++RIH LGV+KI VPSL PLGCLP  T   SFQ+CNET+N
Sbjct: 181 RPASEFPAFIKQVVDQTEVNLRRIHALGVKKIAVPSLQPLGCLPPFTFVTSFQRCNETQN 240

Query: 234 SLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNK----GSSKTENPLMPCCV 289
           +L   HN LLQQ VAKLNNETK S F+ILDL+ AF+T FKNK    GS++ E+PL PCCV
Sbjct: 241 ALVNLHNNLLQQVVAKLNNETKQSTFIILDLYNAFLTVFKNKGSNPGSTRFESPLKPCCV 300

Query: 290 GIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKL 341
           G+ ++ +CGSVD+ GVK Y VC  P+ +FFWDG+HP++EGW+SVYS L+  L
Sbjct: 301 GVSREYNCGSVDEKGVKKYIVCDNPKTAFFWDGLHPTEEGWRSVYSVLRESL 352

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9SF94|GDL50_ARATH GDSL esterase/lipase At3g09930 OS=Arabidopsis thaliana GN=At3g09930 PE=2 SV=1 Back     alignment and function description
>sp|Q8RWJ4|GDL45_ARATH GDSL esterase/lipase At2g36325 OS=Arabidopsis thaliana GN=At2g36325 PE=2 SV=2 Back     alignment and function description
>sp|Q9LZS8|GDL70_ARATH GDSL esterase/lipase At5g03600 OS=Arabidopsis thaliana GN=At5g03600 PE=3 SV=1 Back     alignment and function description
>sp|Q9LZS9|GDL69_ARATH GDSL esterase/lipase At5g03590 OS=Arabidopsis thaliana GN=At5g03590 PE=3 SV=2 Back     alignment and function description
>sp|Q3MKY2|AAE_RAUSE Acetylajmalan esterase OS=Rauvolfia serpentina GN=AAE PE=1 SV=1 Back     alignment and function description
>sp|Q9SJB4|GDL34_ARATH GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1 Back     alignment and function description
>sp|Q7XA74|GDL21_ARATH GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1 Back     alignment and function description
>sp|P40602|APG_ARATH Anther-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2 Back     alignment and function description
>sp|Q9LMJ3|GDL1_ARATH GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
255575625356 carboxylic ester hydrolase, putative [Ri 0.994 0.966 0.648 1e-131
225440948358 PREDICTED: GDSL esterase/lipase At5g0361 0.910 0.879 0.667 1e-126
224122914358 predicted protein [Populus trichocarpa] 0.887 0.857 0.678 1e-123
15242811359 GDSL esterase/lipase [Arabidopsis thalia 0.985 0.949 0.599 1e-116
297806327359 GDSL-motif lipase/hydrolase family prote 0.907 0.874 0.621 1e-114
449462986315 PREDICTED: GDSL esterase/lipase At5g0361 0.884 0.971 0.631 1e-113
449500949315 PREDICTED: GDSL esterase/lipase At5g0361 0.884 0.971 0.628 1e-112
356572536352 PREDICTED: GDSL esterase/lipase At5g0361 0.968 0.951 0.572 1e-106
356548415357 PREDICTED: GDSL esterase/lipase At5g0361 0.898 0.871 0.583 1e-105
356505346350 PREDICTED: GDSL esterase/lipase At5g0361 0.930 0.92 0.590 1e-105
>gi|255575625|ref|XP_002528712.1| carboxylic ester hydrolase, putative [Ricinus communis] gi|223531806|gb|EEF33624.1| carboxylic ester hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/356 (64%), Positives = 274/356 (76%), Gaps = 12/356 (3%)

Query: 1   MDTIKALLFSFFH--LLFFLSG------QQQQVLGHRQLYGFRPTKIFVFGDSYVDTGNI 52
           M T++ LLFS F   LLF ++G      Q      HR L+ F+P+K+FVFGDSY DTGN+
Sbjct: 1   MGTLQFLLFSIFSISLLFLIAGVHGGHQQHHHHHRHRHLFSFKPSKLFVFGDSYADTGNV 60

Query: 53  PKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGM 112
            KS+  SWKEPYG+TFPGKPAGRFSDGR+LTDYLARF+G+KSP+ Y+WRK A  +LKYGM
Sbjct: 61  QKSLASSWKEPYGITFPGKPAGRFSDGRILTDYLARFIGVKSPMPYKWRKYATNHLKYGM 120

Query: 113 NFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAV 172
           NFA+GGTGVFDT V  PNMT QID FQ +I + VY+  DL SS ALVS AGNDY+TY+A 
Sbjct: 121 NFAYGGTGVFDTFVPEPNMTVQIDLFQNMINDKVYTTRDLHSSAALVSLAGNDYATYLAT 180

Query: 173 NGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETE 232
           NGSA+GF  FI KVVNQ+T+N+KRIH LGV+K+ V +L PLGCLP+ST   SFQQCN TE
Sbjct: 181 NGSAQGFPDFIRKVVNQITVNLKRIHELGVKKVAVTALQPLGCLPRSTFASSFQQCNGTE 240

Query: 233 NSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNK----GSSKTENPLMPCC 288
           N L   HNL+LQQAVAKLNNETKDS FVILD++ AFMT FKNK    GSS  +NPL PCC
Sbjct: 241 NELVSLHNLMLQQAVAKLNNETKDSTFVILDIYSAFMTVFKNKGDHPGSSTFQNPLKPCC 300

Query: 289 VGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQI 344
           VG     SCG + +NG K+YTVC  PEA+FFWD VHP+QEGW+SVY AL+  LQQ+
Sbjct: 301 VGTSTQYSCGDLHENGTKMYTVCDDPEATFFWDTVHPTQEGWRSVYLALQANLQQL 356

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225440948|ref|XP_002283113.1| PREDICTED: GDSL esterase/lipase At5g03610 [Vitis vinifera] gi|297740084|emb|CBI30266.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224122914|ref|XP_002330395.1| predicted protein [Populus trichocarpa] gi|222871780|gb|EEF08911.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15242811|ref|NP_195981.1| GDSL esterase/lipase [Arabidopsis thaliana] gi|75181338|sp|Q9LZS7.1|GDL71_ARATH RecName: Full=GDSL esterase/lipase At5g03610; AltName: Full=Extracellular lipase At5g03610; Flags: Precursor gi|13430834|gb|AAK26039.1|AF360329_1 unknown protein [Arabidopsis thaliana] gi|7340646|emb|CAB82926.1| putative protein [Arabidopsis thaliana] gi|21537326|gb|AAM61667.1| putative lipase/acylhydrolase [Arabidopsis thaliana] gi|332003250|gb|AED90633.1| GDSL esterase/lipase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297806327|ref|XP_002871047.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316884|gb|EFH47306.1| GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449462986|ref|XP_004149215.1| PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449500949|ref|XP_004161236.1| PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356572536|ref|XP_003554424.1| PREDICTED: GDSL esterase/lipase At5g03610-like [Glycine max] Back     alignment and taxonomy information
>gi|356548415|ref|XP_003542597.1| PREDICTED: GDSL esterase/lipase At5g03610-like [Glycine max] Back     alignment and taxonomy information
>gi|356505346|ref|XP_003521452.1| PREDICTED: GDSL esterase/lipase At5g03610-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
TAIR|locus:2144558359 AT5G03610 "AT5G03610" [Arabido 0.907 0.874 0.625 7e-109
TAIR|locus:2085054354 AT3G09930 "AT3G09930" [Arabido 0.942 0.920 0.555 2.5e-97
TAIR|locus:4010713686356 AT2G36325 [Arabidopsis thalian 0.884 0.859 0.484 3.1e-76
TAIR|locus:2144548322 AT5G03600 "AT5G03600" [Arabido 0.875 0.940 0.459 6.3e-69
TAIR|locus:2058309350 AT2G04570 "AT2G04570" [Arabido 0.812 0.802 0.322 7.1e-29
TAIR|locus:2014385417 MVP1 "AT1G54030" [Arabidopsis 0.832 0.690 0.278 3.9e-28
TAIR|locus:4515102552383 AT1G20132 [Arabidopsis thalian 0.855 0.772 0.301 6.4e-28
TAIR|locus:2063083361 AT2G40250 "AT2G40250" [Arabido 0.861 0.825 0.284 1.3e-27
TAIR|locus:2197014385 GLIP5 "AT1G53920" [Arabidopsis 0.829 0.745 0.288 2.2e-27
TAIR|locus:2165810369 AT5G42170 "AT5G42170" [Arabido 0.838 0.785 0.316 4.5e-27
TAIR|locus:2144558 AT5G03610 "AT5G03610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
 Identities = 200/320 (62%), Positives = 245/320 (76%)

Query:    28 HRQLYGFRPTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLA 87
             +  LY FRPTK+FVFGDSY DTGNI K+   SWK PYG+TFPGKPAGRFSDGRV TD+LA
Sbjct:    33 NHHLYPFRPTKLFVFGDSYADTGNIKKAFSSSWKFPYGITFPGKPAGRFSDGRVATDFLA 92

Query:    88 RFVGIKSPIAYRWRKIA-LKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDFFQQVIKEA- 145
             +FVGIKSPI Y W+  A  K L+YGMNFA+GGTGVF+T    PNMTTQID FQ ++    
Sbjct:    93 KFVGIKSPIPYFWKDYAGKKRLQYGMNFAYGGTGVFNTQTPLPNMTTQIDIFQNILTTGD 152

Query:   146 VYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKI 205
             +Y P +L SS+ALVS AGNDYS ++A+N  A  F  FI +VV+Q  +N++RIH LGV+KI
Sbjct:   153 IYYPPELTSSVALVSVAGNDYSNFIALNRPASEFPAFIKQVVDQTEVNLRRIHALGVKKI 212

Query:   206 LVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLF 265
              VPSL PLGCLP  T   SFQ+CNET+N+L   HN LLQQ VAKLNNETK S F+ILDL+
Sbjct:   213 AVPSLQPLGCLPPFTFVTSFQRCNETQNALVNLHNNLLQQVVAKLNNETKQSTFIILDLY 272

Query:   266 GAFMTTFKNKGSS----KTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWD 321
              AF+T FKNKGS+    + E+PL PCCVG+ ++ +CGSVD+ GVK Y VC  P+ +FFWD
Sbjct:   273 NAFLTVFKNKGSNPGSTRFESPLKPCCVGVSREYNCGSVDEKGVKKYIVCDNPKTAFFWD 332

Query:   322 GVHPSQEGWQSVYSALKPKL 341
             G+HP++EGW+SVYS L+  L
Sbjct:   333 GLHPTEEGWRSVYSVLRESL 352
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2085054 AT3G09930 "AT3G09930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4010713686 AT2G36325 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144548 AT5G03600 "AT5G03600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2058309 AT2G04570 "AT2G04570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014385 MVP1 "AT1G54030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4515102552 AT1G20132 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063083 AT2G40250 "AT2G40250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197014 GLIP5 "AT1G53920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165810 AT5G42170 "AT5G42170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LZS7GDL71_ARATH3, ., 1, ., 1, ., -0.59940.98550.9498yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.10.691
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00021651001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (355 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 4e-91
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 5e-30
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 9e-27
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 3e-14
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 2e-10
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 1e-09
PRK15381408 PRK15381, PRK15381, pathogenicity island 2 effecto 5e-05
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  274 bits (704), Expect = 4e-91
 Identities = 96/313 (30%), Positives = 153/313 (48%), Gaps = 18/313 (5%)

Query: 39  IFVFGDSYVDTGNIP--KSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPI 96
           +FVFGDS VDTGN     ++  +   PYG+ FPG+P GRFS+GR++ D++A  +G+    
Sbjct: 3   LFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLP 62

Query: 97  AYRWRKIALKNLKYGMNFAFGGTGVFDT---LVANPNMTTQIDFFQQVIKEAVYSPAD-- 151
                     +   G+NFA GG G+ D+   L +  +++ Q+++F++  +       +  
Sbjct: 63  PPYLSPNGSSDFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEA 122

Query: 152 ----LKSSLALVSAAGNDYSTYVAVNGSA-EGFQPFITKVVNQLTLNMKRIHGLGVRKIL 206
               L  SL L+S   NDY      N +     + ++  +V+ ++  +KR++ LG RK +
Sbjct: 123 AADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKFV 182

Query: 207 VPSLPPLGCLPQSTSKLSF--QQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDL 264
           VP L PLGCLP   +        C E  N L+   N  L++ +A+L  E   + FV  D+
Sbjct: 183 VPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADI 242

Query: 265 FGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVH 324
           + A +   +N      EN L  CC   G +              TVC  P    FWDGVH
Sbjct: 243 YNALLDLIQNPAKYGFENTLKACCGTGGPEGGL----LCNPCGSTVCPDPSKYVFWDGVH 298

Query: 325 PSQEGWQSVYSAL 337
           P++   + +  AL
Sbjct: 299 PTEAANRIIADAL 311

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|185279 PRK15381, PRK15381, pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 346
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.95
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.58
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.51
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.5
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.45
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.44
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.44
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.4
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.4
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.4
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.39
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.39
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.37
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.36
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.35
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.33
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 99.33
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.3
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.3
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.28
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 99.21
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 99.2
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.16
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 99.15
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 99.13
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 99.09
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.97
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 98.95
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.7
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.67
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 98.47
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.44
KOG3670397 consensus Phospholipase [Lipid transport and metab 98.11
COG2845354 Uncharacterized protein conserved in bacteria [Fun 97.06
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 95.64
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 85.64
PF04914130 DltD_C: DltD C-terminal region; InterPro: IPR00699 80.34
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-70  Score=523.88  Aligned_cols=304  Identities=27%  Similarity=0.457  Sum_probs=255.3

Q ss_pred             CCceEEEeCCccccCCCCCCCC--CCCCCCCCCCCCCC-CCCcccCCCCchhhhhHhhhCC-CCCCCccccccccccccc
Q 019114           35 RPTKIFVFGDSYVDTGNIPKSV--LGSWKEPYGLTFPG-KPAGRFSDGRVLTDYLARFVGI-KSPIAYRWRKIALKNLKY  110 (346)
Q Consensus        35 ~~~~l~vFGDSlsD~Gn~~~~~--~~~~~~P~g~~~~~-~~~grfSnG~~w~d~la~~lg~-~~~~~~~~~~~~~~~~~~  110 (346)
                      ++++|||||||++|+||++.+.  .+++.+|||++||+ +|+||||||++|+||||+.||+ +.+|||+.+..+..+..+
T Consensus        26 ~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~~  105 (351)
T PLN03156         26 KVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFAT  105 (351)
T ss_pred             CCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhhcc
Confidence            3599999999999999987653  25788999999986 7999999999999999999999 778899876433456789


Q ss_pred             CcceeeccceeccCCC---CCCChHHHHHHHHHHHHhhc------cCcccccCceEEEEecchhhhh-hhhc-CC-CCCC
Q 019114          111 GMNFAFGGTGVFDTLV---ANPNMTTQIDFFQQVIKEAV------YSPADLKSSLALVSAAGNDYST-YVAV-NG-SAEG  178 (346)
Q Consensus       111 g~NyA~gGA~~~~~~~---~~~~l~~Qi~~f~~~~~~~~------~~~~~~~~sL~~i~iG~ND~~~-~~~~-~~-t~~~  178 (346)
                      |+|||+||+++.+.+.   ...+|..||++|+.++++..      .+....+++||+||||+|||.. ++.. +. ....
T Consensus       106 GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~~  185 (351)
T PLN03156        106 GVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQYT  185 (351)
T ss_pred             cceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccccccccCC
Confidence            9999999999876654   34579999999987765311      1123458999999999999985 3221 11 1234


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCcCcccccC--CcccchhHHhhHHHHHHHHHHHHHHHHhhhCCC
Q 019114          179 FQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKL--SFQQCNETENSLSGFHNLLLQQAVAKLNNETKD  256 (346)
Q Consensus       179 ~~~~~~~~v~~i~~~i~~L~~~Gar~~lv~~lp~l~~~P~~~~~~--~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~  256 (346)
                      +.++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+...  +..+|.+.+|.+++.||++|++++++|++++|+
T Consensus       186 ~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg  265 (351)
T PLN03156        186 VSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPG  265 (351)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            678889999999999999999999999999999999999865432  345799999999999999999999999999999


Q ss_pred             CeEEEecchHHHHHHHhccCCCCCcCCCCCcccccCC---CCCCCCCCCCCCcccccCCCCCCccccCCCCccHHHHHHH
Q 019114          257 SAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGK---DSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGWQSV  333 (346)
Q Consensus       257 ~~i~~~D~~~~~~~i~~~p~~yGf~n~~~~C~~~~~~---~~~c~~~~~~g~~~~~~C~~~~~ylf~D~vHPT~~~h~li  333 (346)
                      ++|+++|+|+++.++++||++|||++++++||+ .|.   ...|+.      .....|++|++|+|||++|||+++|++|
T Consensus       266 ~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg-~g~~~~~~~C~~------~~~~~C~~p~~yvfWD~~HPTe~a~~~i  338 (351)
T PLN03156        266 IKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCA-TGMFEMGYLCNR------NNPFTCSDADKYVFWDSFHPTEKTNQII  338 (351)
T ss_pred             CeEEEEehHHHHHHHHhCccccCcccCCccccC-CCCCCCccccCC------CCCCccCCccceEEecCCCchHHHHHHH
Confidence            999999999999999999999999999999994 332   345753      2235799999999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q 019114          334 YSALKPKLQQIY  345 (346)
Q Consensus       334 a~~i~~~l~~~~  345 (346)
                      |+.+.+.|.+.|
T Consensus       339 A~~~~~~l~~~~  350 (351)
T PLN03156        339 ANHVVKTLLSKF  350 (351)
T ss_pred             HHHHHHHHHHhh
Confidence            999999998876

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 6e-40
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  147 bits (373), Expect = 6e-40
 Identities = 60/326 (18%), Positives = 104/326 (31%), Gaps = 38/326 (11%)

Query: 37  TKIFVFGDSYVDTGNI--PKSVLGSWKEPYGLTFP-GKPAGRFSDGRVLTDYLARFVGIK 93
           + + VFGDS  D G    P    GS         P  +       G      L   +GI 
Sbjct: 16  STLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIA 75

Query: 94  S--PIAYRWRKIALKNLKYGMNFAFGGTGVFDTL----VANPNMTTQIDFFQQVIKEAVY 147
                A      A + +  G N+A GG            AN ++  + +   +     + 
Sbjct: 76  PGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLV 135

Query: 148 SPAD-----LKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRIHGLGV 202
             A        ++L  ++  GND+     +N           +   +L  +++ +   G 
Sbjct: 136 DRARQGLGADPNALYYITGGGNDFLQGRILN------DVQAQQAAGRLVDSVQALQQAGA 189

Query: 203 RKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVIL 262
           R I+V  LP LG  P +             + LSG  N  L   +++       +  + L
Sbjct: 190 RYIVVWLLPDLGLTPATFG----GPLQPFASQLSGTFNAELTAQLSQAG-----ANVIPL 240

Query: 263 DLFGAFMTTFKNK---GSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFF 319
           ++         N    G +  +N +  C  G G   +          +      P    F
Sbjct: 241 NIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTY------GINGSTPDPSKLLF 294

Query: 320 WDGVHPSQEGWQSVYSALKPKLQQIY 345
            D VHP+  G + +       L   +
Sbjct: 295 NDSVHPTITGQRLIADYTYSLLSAPW 320
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.76
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.66
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.62
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.6
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.58
2hsj_A214 Putative platelet activating factor; structr genom 99.57
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.52
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.52
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.5
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.48
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.48
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.46
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.45
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.44
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.42
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.34
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.34
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.29
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 99.27
3bzw_A274 Putative lipase; protein structure initiative II, 99.27
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 99.08
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 99.08
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.93
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.81
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 85.34
3bma_A407 D-alanyl-lipoteichoic acid synthetase; structural 81.62
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=6.6e-56  Score=453.86  Aligned_cols=286  Identities=20%  Similarity=0.211  Sum_probs=223.2

Q ss_pred             CCCCCceEEEeCCccccCCCCCCCCCCCC---CC--CCCCCCCCCCCcccC-CCCchhhhhHhhhCCCC--CCCcccccc
Q 019114           32 YGFRPTKIFVFGDSYVDTGNIPKSVLGSW---KE--PYGLTFPGKPAGRFS-DGRVLTDYLARFVGIKS--PIAYRWRKI  103 (346)
Q Consensus        32 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~---~~--P~g~~~~~~~~grfS-nG~~w~d~la~~lg~~~--~~~~~~~~~  103 (346)
                      ...++++||+||||+||+||.........   ..  |.|.+   +++|||| ||++|+||||+.||++.  ++||+....
T Consensus        11 ~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~---~~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~~   87 (632)
T 3kvn_X           11 APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPT---YQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVN   87 (632)
T ss_dssp             CCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSS---CCTTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHHH
T ss_pred             CCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCc---cccCcccccCCchHHHHHHHcCCCccccCccccccc
Confidence            44477999999999999999876643211   11  12433   4599999 99999999999999984  556654322


Q ss_pred             cccccccCcceeecccee---ccCC----CCCCChHHHHH----HHHHHHHhhccCcccccCceEEEEecchhhhhhhhc
Q 019114          104 ALKNLKYGMNFAFGGTGV---FDTL----VANPNMTTQID----FFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAV  172 (346)
Q Consensus       104 ~~~~~~~g~NyA~gGA~~---~~~~----~~~~~l~~Qi~----~f~~~~~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~  172 (346)
                      ...++.+|+|||+|||++   .+..    ....+|..||.    .|++.+..  .+....+++||+||||+|||...+..
T Consensus        88 ~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~--~~~~~~~~sL~~v~iG~ND~~~~~~~  165 (632)
T 3kvn_X           88 AQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR--QGLGADPNALYYITGGGNDFLQGRIL  165 (632)
T ss_dssp             HHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT--TTCCCCTTSEEEECCSHHHHHTTCCC
T ss_pred             cccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh--ccCccCCCCEEEEEEechhhhccccc
Confidence            245778999999999996   3221    11223444444    44433222  22456799999999999999865421


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHhcCCcEEEecCCCCCCCcCcccccCCcccchhHHhhHHHHHHHHHHHHHHHHhh
Q 019114          173 NGSAEGFQPFITKVVNQLTLNMKRIHGLGVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNN  252 (346)
Q Consensus       173 ~~t~~~~~~~~~~~v~~i~~~i~~L~~~Gar~~lv~~lp~l~~~P~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~  252 (346)
                            .+++++.+++++.++|++|+++|||+|+|+++||++|+|...    ..+|.+.+|++++.||++|++++++|+ 
T Consensus       166 ------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~----~~~c~~~~n~~~~~~N~~L~~~l~~l~-  234 (632)
T 3kvn_X          166 ------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF----GGPLQPFASQLSGTFNAELTAQLSQAG-  234 (632)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT----TSTTHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc----CCCchHHHHHHHHHHHHHHHHHHHhCC-
Confidence                  135789999999999999999999999999999999999853    247999999999999999999999996 


Q ss_pred             hCCCCeEEEecchHHHHHHHhccCCCCCcCCC--CCcccccCCCCCCCCCCCCCCcccccCCCCCCccccCCCCccHHHH
Q 019114          253 ETKDSAFVILDLFGAFMTTFKNKGSSKTENPL--MPCCVGIGKDSSCGSVDDNGVKLYTVCAKPEASFFWDGVHPSQEGW  330 (346)
Q Consensus       253 ~~~~~~i~~~D~~~~~~~i~~~p~~yGf~n~~--~~C~~~~~~~~~c~~~~~~g~~~~~~C~~~~~ylf~D~vHPT~~~h  330 (346)
                          ++|+++|+|.++.++++||++|||++++  .+||. .+.  .|+....++  ...+|.||++|+|||++|||+++|
T Consensus       235 ----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg-~g~--~C~~~~~~~--~~~~C~~~~~y~fwD~~HpTe~~~  305 (632)
T 3kvn_X          235 ----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCF-SGN--GCTMNPTYG--INGSTPDPSKLLFNDSVHPTITGQ  305 (632)
T ss_dssp             ----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBS-SCT--TSCBCTTTS--TTSSSCCGGGCSBSSSSCBCHHHH
T ss_pred             ----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccC-CCC--ccCCccccc--ccccCCCccceEEecCCCCHHHHH
Confidence                4799999999999999999999999975  69994 442  687543222  246899999999999999999999


Q ss_pred             HHHHHHHHHHHh
Q 019114          331 QSVYSALKPKLQ  342 (346)
Q Consensus       331 ~lia~~i~~~l~  342 (346)
                      ++||+.+.+.|.
T Consensus       306 ~~ia~~~~~~~~  317 (632)
T 3kvn_X          306 RLIADYTYSLLS  317 (632)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHhccC
Confidence            999999998764
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 346
d1esca_302 c.23.10.1 (A:) Esterase {Streptomyces scabies [Tax 1e-05
d1fxwf_212 c.23.10.3 (F:) Platelet-activating factor acetylhy 0.003
d1es9a_212 c.23.10.3 (A:) Platelet-activating factor acetylhy 0.004
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Length = 302 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 39/334 (11%), Positives = 77/334 (23%), Gaps = 58/334 (17%)

Query: 36  PTKIFVFGDSYV----DTGNIPKSVLGSWKEPYGLTFPGKPAGRFSD------------- 78
           P     FGDSY           +     W       +P       +D             
Sbjct: 2   PVPTVFFGDSYTANFGIAPVTNQDSERGWCFQAKENYPAVATRSLADKGITLDVQADVSC 61

Query: 79  -GRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFAFGGTGVFDTLVANPNMTTQIDF 137
            G ++  +  +    + P            LK       G  G               + 
Sbjct: 62  GGALIHHFWEKQ---ELPFGAGELPPQQDALKQDTQLTVGSLGGNTLGFNRILKQCSDEL 118

Query: 138 FQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAVNGSAEGFQPFITKVVNQLTLNMKRI 197
                      P+ L                +       +       +V  +L   + RI
Sbjct: 119 ---------RKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEELLDRI 169

Query: 198 HGL--GVRKILVPSLPPLGCLPQSTSKLSFQQCNETENSLSGFHNLLLQQAVAKLNNETK 255
                  +++LV     +          +  Q       +      +L Q   +LN+  K
Sbjct: 170 GYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMK 229

Query: 256 DSA----FVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDNGVKLYTVC 311
            +A       +DL+          G+ +    L+                          
Sbjct: 230 KAAADGGADFVDLYAGTGANTACDGADRGIGGLLE----------------------DSQ 267

Query: 312 AKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIY 345
            +   +      HP+ +G       +  K+++I 
Sbjct: 268 LELLGTKIPWYAHPNDKGRDIQAKQVADKIEEIL 301
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Length = 212 Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Length = 212 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.76
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.57
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.51
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.46
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.43
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 99.36
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 99.33
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.32
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 99.32
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 99.24
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 99.12
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.76  E-value=7.6e-19  Score=160.28  Aligned_cols=248  Identities=16%  Similarity=0.096  Sum_probs=136.3

Q ss_pred             CceEEEeCCccccCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCchhhhhHhhhCCCCCCCcccccccccccccCccee
Q 019114           36 PTKIFVFGDSYVDTGNIPKSVLGSWKEPYGLTFPGKPAGRFSDGRVLTDYLARFVGIKSPIAYRWRKIALKNLKYGMNFA  115 (346)
Q Consensus        36 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~P~g~~~~~~~~grfSnG~~w~d~la~~lg~~~~~~~~~~~~~~~~~~~g~NyA  115 (346)
                      +-.+|+||||++-........        +...+..+..|  .+..|+++||+.++....           ......|||
T Consensus         2 p~~~V~lGDS~tag~g~~~~~--------~~~~~~~~C~r--s~~~y~~~la~~l~~~~~-----------~~~~~~n~a   60 (302)
T d1esca_           2 PVPTVFFGDSYTANFGIAPVT--------NQDSERGWCFQ--AKENYPAVATRSLADKGI-----------TLDVQADVS   60 (302)
T ss_dssp             EEEEEECCSHHHHTTTCSSBT--------TTTSGGGGGTC--BTTCHHHHHHHHHHTTTC-----------EEEEEEECC
T ss_pred             CCCEEEecchhccCCCCCccc--------CCCCCCCcccC--CCcCHHHHHHHHhccccC-----------CceeEEEee
Confidence            357999999998432221111        10000011122  367899999999876531           112246999


Q ss_pred             eccceeccCCCC------CCChHHHHHHHHHHHHhhccCcccccCceEEEEecchhhhhhhhc------CCC--------
Q 019114          116 FGGTGVFDTLVA------NPNMTTQIDFFQQVIKEAVYSPADLKSSLALVSAAGNDYSTYVAV------NGS--------  175 (346)
Q Consensus       116 ~gGA~~~~~~~~------~~~l~~Qi~~f~~~~~~~~~~~~~~~~sL~~i~iG~ND~~~~~~~------~~t--------  175 (346)
                      .+||++.+-...      ......|++.            ......|++|+||+||+......      ...        
T Consensus        61 ~sGatt~~~~~~~~~~~~~~~~~~Q~~~------------l~~~~dlVtl~iGgND~~~~~~~~~~~~~~~~~~~~~~~~  128 (302)
T d1esca_          61 CGGALIHHFWEKQELPFGAGELPPQQDA------------LKQDTQLTVGSLGGNTLGFNRILKQCSDELRKPSLLPGDP  128 (302)
T ss_dssp             CTTCCGGGGTSCEECGGGCCEECCGGGG------------CCTTCCEEEECCCHHHHTHHHHHHHTCTTTTSSCSSCCCC
T ss_pred             ecccchhhhhccccccccccchhhhhhh------------ccCCCCEEEEecCCcccchhhhhhhhhhcccccccccccc
Confidence            999987653321      1111223322            11245799999999998642100      000        


Q ss_pred             ---------------CCChhhHH----HHHHHHHHHHHHHHHhc-CCcEEEecCCCCCCCc---Cccccc-----C----
Q 019114          176 ---------------AEGFQPFI----TKVVNQLTLNMKRIHGL-GVRKILVPSLPPLGCL---PQSTSK-----L----  223 (346)
Q Consensus       176 ---------------~~~~~~~~----~~~v~~i~~~i~~L~~~-Gar~~lv~~lp~l~~~---P~~~~~-----~----  223 (346)
                                     .....+.+    +.+..++.+.++++.+. +--+|++++.|++...   +.....     .    
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~  208 (302)
T d1esca_         129 VDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFAD  208 (302)
T ss_dssp             SSTTSCGGGHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTT
T ss_pred             ccccccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccc
Confidence                           00011223    33344444455555543 2337888898865310   000000     0    


Q ss_pred             CcccchhHHhhHHHHHHHHHHHHHHHHhhhCCCCeEEEecchHHHHHHHhccCCCCCcCCCCCcccccCCCCCCCCCCCC
Q 019114          224 SFQQCNETENSLSGFHNLLLQQAVAKLNNETKDSAFVILDLFGAFMTTFKNKGSSKTENPLMPCCVGIGKDSSCGSVDDN  303 (346)
Q Consensus       224 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~n~~~~C~~~~~~~~~c~~~~~~  303 (346)
                      -.......++.+...+|+.+++..++       ..+.++|++..+.       .+++-...++|..+.            
T Consensus       209 ~~~~~~~~~~~~~~~~n~~i~~~A~~-------~~v~~vd~~~~f~-------~~~~c~~~~~~~~~~------------  262 (302)
T d1esca_         209 IPQDALPVLDQIQKRLNDAMKKAAAD-------GGADFVDLYAGTG-------ANTACDGADRGIGGL------------  262 (302)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHT-------TTCEEECTGGGCT-------TSSTTSTTSCSBCCS------------
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHH-------cCCEEEechhhhc-------ccccccccccccccc------------
Confidence            01122345677888888888876543       2377889887553       122212222222110            


Q ss_pred             CCcccccCCCCCCccccCCCCccHHHHHHHHHHHHHHHhhhh
Q 019114          304 GVKLYTVCAKPEASFFWDGVHPSQEGWQSVYSALKPKLQQIY  345 (346)
Q Consensus       304 g~~~~~~C~~~~~ylf~D~vHPT~~~h~lia~~i~~~l~~~~  345 (346)
                         ......++..+++||.+|||++||++||+.|.+.|+|+|
T Consensus       263 ---~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~i~~~l~~~~  301 (302)
T d1esca_         263 ---LEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADKIEEIL  301 (302)
T ss_dssp             ---SSEEEEESSSCEEECSSCBCHHHHHHHHHHHHHHHHHHT
T ss_pred             ---ccccccccccccccCCcCCCHHHHHHHHHHHHHHHHHHh
Confidence               112233567899999999999999999999999999987
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure